Metagenome Family F046709

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046709
Family Type	Metagenome
Number of Sequences	151
Average Sequence Length	68 residues
Representative Sequence	VSRPSWQLRDAALGYASRGIPVLPLHYPLPHHGDLQPVPGDQPPAVRTGCSCRDPGCGQPAKHP
Number of Associated Samples	73
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.34 %
% of genes near scaffold ends (potentially truncated)	98.01 %
% of genes from short scaffolds (< 2000 bps)	99.34 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (89.404 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere (31.126 % of family members)
Environment Ontology (ENVO)	Unclassified (33.775 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.384 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.57% β-sheet: 0.00% Coil/Unstructured: 80.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.30
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.30
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF10935	DUF2637	21.85
PF09250	Prim-Pol	1.32
PF02534	T4SS-DNA_transf	1.32
PF00072	Response_reg	0.66
PF12696	TraG-D_C	0.66
PF13604	AAA_30	0.66
PF00326	Peptidase_S9	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG3505	Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase	Intracellular trafficking, secretion, and vesicular transport [U]	1.32

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.40 %
All Organisms	root	All Organisms	10.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.40 %
cellular organisms	root	All Organisms → cellular organisms	10.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.40 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.40 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.40 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.40 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.40 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.40 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.40 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001431\|F14TB_100200348	Not Available	663	Open in IMG/M
3300003373\|JGI25407J50210_10187814	Not Available	509	Open in IMG/M
3300005172\|Ga0066683_10734377	Not Available	581	Open in IMG/M
3300005562\|Ga0058697_10316635	Not Available	749	Open in IMG/M
3300005562\|Ga0058697_10808141	Not Available	508	Open in IMG/M
3300005981\|Ga0081538_10153424	Not Available	1038	Open in IMG/M
3300005981\|Ga0081538_10308115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300005981\|Ga0081538_10354344	Not Available	531	Open in IMG/M
3300006844\|Ga0075428_100706902	Not Available	1074	Open in IMG/M
3300006845\|Ga0075421_101521977	Not Available	731	Open in IMG/M
3300006853\|Ga0075420_101215039	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300009100\|Ga0075418_11824481	Not Available	661	Open in IMG/M
3300009100\|Ga0075418_12670156	Not Available	545	Open in IMG/M
3300009147\|Ga0114129_11083451	Not Available	1004	Open in IMG/M
3300009147\|Ga0114129_13064288	Not Available	547	Open in IMG/M
3300009156\|Ga0111538_11627820	Not Available	814	Open in IMG/M
3300009789\|Ga0126307_10021749	All Organisms → cellular organisms → Bacteria	4852	Open in IMG/M
3300009789\|Ga0126307_10184681	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1672	Open in IMG/M
3300009789\|Ga0126307_10227655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1497	Open in IMG/M
3300009789\|Ga0126307_10830816	Not Available	746	Open in IMG/M
3300009789\|Ga0126307_11017913	Not Available	669	Open in IMG/M
3300009840\|Ga0126313_11162368	Not Available	635	Open in IMG/M
3300009840\|Ga0126313_11772887	Not Available	516	Open in IMG/M
3300010036\|Ga0126305_10756868	Not Available	659	Open in IMG/M
3300010036\|Ga0126305_11211396	Not Available	522	Open in IMG/M
3300010036\|Ga0126305_11266394	Not Available	509	Open in IMG/M
3300010038\|Ga0126315_10574686	Not Available	725	Open in IMG/M
3300010041\|Ga0126312_10337484	Not Available	1067	Open in IMG/M
3300010041\|Ga0126312_10694834	Not Available	734	Open in IMG/M
3300010042\|Ga0126314_10190464	Not Available	1442	Open in IMG/M
3300010042\|Ga0126314_10635288	Not Available	780	Open in IMG/M
3300010042\|Ga0126314_10769718	Not Available	708	Open in IMG/M
3300010042\|Ga0126314_10782938	Not Available	701	Open in IMG/M
3300010044\|Ga0126310_10773729	Not Available	735	Open in IMG/M
3300010044\|Ga0126310_10988599	Not Available	662	Open in IMG/M
3300010044\|Ga0126310_11810246	Not Available	509	Open in IMG/M
3300010045\|Ga0126311_10487498	Not Available	962	Open in IMG/M
3300010045\|Ga0126311_10530530	Not Available	924	Open in IMG/M
3300010166\|Ga0126306_10652726	Not Available	841	Open in IMG/M
3300010166\|Ga0126306_11461023	Not Available	567	Open in IMG/M
3300012355\|Ga0137369_11102414	Not Available	518	Open in IMG/M
3300013307\|Ga0157372_12966029	Not Available	543	Open in IMG/M
3300014487\|Ga0182000_10207297	Not Available	756	Open in IMG/M
3300017792\|Ga0163161_11814532	Not Available	542	Open in IMG/M
3300018028\|Ga0184608_10378798	Not Available	617	Open in IMG/M
3300018028\|Ga0184608_10489295	Not Available	527	Open in IMG/M
3300018054\|Ga0184621_10359247	Not Available	512	Open in IMG/M
3300018066\|Ga0184617_1138379	Not Available	706	Open in IMG/M
3300018081\|Ga0184625_10351292	Not Available	766	Open in IMG/M
3300018476\|Ga0190274_12099319	Not Available	662	Open in IMG/M
3300019767\|Ga0190267_10257587	Not Available	869	Open in IMG/M
3300019767\|Ga0190267_10732075	Not Available	643	Open in IMG/M
3300019767\|Ga0190267_11481450	Not Available	521	Open in IMG/M
3300019767\|Ga0190267_11513564	Not Available	518	Open in IMG/M
3300021510\|Ga0222621_1115756	Not Available	570	Open in IMG/M
3300022756\|Ga0222622_10575126	Not Available	811	Open in IMG/M
3300027209\|Ga0209875_1042313	Not Available	550	Open in IMG/M
3300027695\|Ga0209966_1137095	Not Available	566	Open in IMG/M
3300027907\|Ga0207428_10745190	Not Available	698	Open in IMG/M
3300027909\|Ga0209382_10498107	Not Available	1342	Open in IMG/M
3300027909\|Ga0209382_11261806	Not Available	751	Open in IMG/M
3300028589\|Ga0247818_10772015	Not Available	670	Open in IMG/M
3300028707\|Ga0307291_1082332	Not Available	794	Open in IMG/M
3300028708\|Ga0307295_10260736	Not Available	500	Open in IMG/M
3300028715\|Ga0307313_10103430	Not Available	866	Open in IMG/M
3300028717\|Ga0307298_10025559	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1551	Open in IMG/M
3300028721\|Ga0307315_10199201	Not Available	620	Open in IMG/M
3300028722\|Ga0307319_10326626	Not Available	509	Open in IMG/M
3300028744\|Ga0307318_10344818	Not Available	524	Open in IMG/M
3300028744\|Ga0307318_10375295	Not Available	502	Open in IMG/M
3300028755\|Ga0307316_10077116	Not Available	1144	Open in IMG/M
3300028755\|Ga0307316_10142298	Not Available	852	Open in IMG/M
3300028755\|Ga0307316_10264684	Not Available	626	Open in IMG/M
3300028755\|Ga0307316_10338144	Not Available	553	Open in IMG/M
3300028771\|Ga0307320_10039519	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1729	Open in IMG/M
3300028771\|Ga0307320_10105938	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300028771\|Ga0307320_10212063	Not Available	758	Open in IMG/M
3300028771\|Ga0307320_10440861	Not Available	524	Open in IMG/M
3300028787\|Ga0307323_10239344	Not Available	654	Open in IMG/M
3300028791\|Ga0307290_10159748	Not Available	825	Open in IMG/M
3300028791\|Ga0307290_10187709	Not Available	758	Open in IMG/M
3300028793\|Ga0307299_10189624	Not Available	773	Open in IMG/M
3300028793\|Ga0307299_10315105	Not Available	587	Open in IMG/M
3300028796\|Ga0307287_10378612	Not Available	533	Open in IMG/M
3300028811\|Ga0307292_10114367	Not Available	1070	Open in IMG/M
3300028811\|Ga0307292_10323816	Not Available	648	Open in IMG/M
3300028811\|Ga0307292_10531033	Not Available	506	Open in IMG/M
3300028814\|Ga0307302_10074065	All Organisms → cellular organisms → Bacteria	1607	Open in IMG/M
3300028814\|Ga0307302_10345637	Not Available	733	Open in IMG/M
3300028814\|Ga0307302_10452242	Not Available	636	Open in IMG/M
3300028814\|Ga0307302_10580623	Not Available	557	Open in IMG/M
3300028814\|Ga0307302_10611919	Not Available	542	Open in IMG/M
3300028814\|Ga0307302_10676005	Not Available	513	Open in IMG/M
3300028875\|Ga0307289_10066469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1452	Open in IMG/M
3300028876\|Ga0307286_10317303	Not Available	577	Open in IMG/M
3300028876\|Ga0307286_10369616	Not Available	535	Open in IMG/M
3300028878\|Ga0307278_10425689	Not Available	582	Open in IMG/M
3300028880\|Ga0307300_10068101	Not Available	1033	Open in IMG/M
3300028885\|Ga0307304_10247885	Not Available	775	Open in IMG/M
3300030514\|Ga0268253_10163320	Not Available	700	Open in IMG/M
3300031548\|Ga0307408_100770043	Not Available	871	Open in IMG/M
3300031548\|Ga0307408_101948817	Not Available	564	Open in IMG/M
3300031548\|Ga0307408_102048786	Not Available	551	Open in IMG/M
3300031731\|Ga0307405_10108051	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1879	Open in IMG/M
3300031731\|Ga0307405_10269963	Not Available	1275	Open in IMG/M
3300031731\|Ga0307405_10406742	Not Available	1067	Open in IMG/M
3300031731\|Ga0307405_10772746	Not Available	802	Open in IMG/M
3300031731\|Ga0307405_11664445	Not Available	564	Open in IMG/M
3300031731\|Ga0307405_11881846	Not Available	533	Open in IMG/M
3300031824\|Ga0307413_11271863	Not Available	643	Open in IMG/M
3300031824\|Ga0307413_11404811	Not Available	614	Open in IMG/M
3300031824\|Ga0307413_11804687	Not Available	547	Open in IMG/M
3300031824\|Ga0307413_11861267	Not Available	540	Open in IMG/M
3300031852\|Ga0307410_10326934	Not Available	1218	Open in IMG/M
3300031852\|Ga0307410_10363593	Not Available	1159	Open in IMG/M
3300031852\|Ga0307410_10735406	Not Available	834	Open in IMG/M
3300031852\|Ga0307410_11382898	Not Available	617	Open in IMG/M
3300031852\|Ga0307410_11607288	Not Available	574	Open in IMG/M
3300031852\|Ga0307410_11673001	Not Available	563	Open in IMG/M
3300031901\|Ga0307406_11855095	Not Available	537	Open in IMG/M
3300031903\|Ga0307407_10190873	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1365	Open in IMG/M
3300031903\|Ga0307407_10520889	Not Available	874	Open in IMG/M
3300031903\|Ga0307407_11199326	Not Available	593	Open in IMG/M
3300031903\|Ga0307407_11362048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	558	Open in IMG/M
3300031903\|Ga0307407_11709446	Not Available	501	Open in IMG/M
3300031911\|Ga0307412_11109159	Not Available	704	Open in IMG/M
3300031995\|Ga0307409_100450218	Not Available	1242	Open in IMG/M
3300031995\|Ga0307409_100916149	Not Available	891	Open in IMG/M
3300031995\|Ga0307409_101231586	Not Available	772	Open in IMG/M
3300031995\|Ga0307409_101358457	Not Available	736	Open in IMG/M
3300031995\|Ga0307409_102352355	Not Available	562	Open in IMG/M
3300031995\|Ga0307409_102961335	Not Available	501	Open in IMG/M
3300032002\|Ga0307416_100391405	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1424	Open in IMG/M
3300032002\|Ga0307416_100675277	Not Available	1120	Open in IMG/M
3300032002\|Ga0307416_102323688	Not Available	636	Open in IMG/M
3300032002\|Ga0307416_102659947	Not Available	597	Open in IMG/M
3300032002\|Ga0307416_103665834	Not Available	514	Open in IMG/M
3300032004\|Ga0307414_11265166	Not Available	684	Open in IMG/M
3300032004\|Ga0307414_11426612	Not Available	644	Open in IMG/M
3300032005\|Ga0307411_10931214	Not Available	774	Open in IMG/M
3300032126\|Ga0307415_100168094	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1707	Open in IMG/M
3300032126\|Ga0307415_100290648	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1349	Open in IMG/M
3300032126\|Ga0307415_100575215	Not Available	998	Open in IMG/M
3300032126\|Ga0307415_100608723	Not Available	973	Open in IMG/M
3300032126\|Ga0307415_101083243	Not Available	749	Open in IMG/M
3300032126\|Ga0307415_101473175	Not Available	650	Open in IMG/M
3300032126\|Ga0307415_101745797	Not Available	601	Open in IMG/M
3300032159\|Ga0268251_10204142	Not Available	776	Open in IMG/M
3300032159\|Ga0268251_10332587	Not Available	639	Open in IMG/M
3300034174\|Ga0334932_039512	Not Available	802	Open in IMG/M
3300034377\|Ga0334931_042862	Not Available	998	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	53.64%
Host-Associated	Host-Associated	46.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.01%
Plants	Host-Associated → Plants	46.36%
Aquatic	Environmental → Aquatic	4.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	39.07%
Sediment	Environmental → Aquatic → Sediment	4.64%
Phylloplane	Host-Associated → Plants → Phylloplane	3.31%
Roots	Host-Associated → Plants → Roots	2.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.32%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	39.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.64%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	3.31%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.32%
Loam	Environmental → Terrestrial → Soil → Loam	0.66%
Sand	Environmental → Terrestrial → Soil → Sand	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	45.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	39.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.64%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	3.31%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	2.65%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.66%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.66%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.66%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	31.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	27.81%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	15.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.28%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.31%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	3.31%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	2.65%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.32%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.66%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.66%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.66%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300027209	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034174	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 28HNS	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TB_1002003482	3300001431	Soil	MSRASWQLREAALGYATRGIPVLPLHFPLPRRSGLQPVASDHPPTLATGCSCRDPSCGQ
JGI25407J50210_101878141	3300003373	Tabebuia Heterophylla Rhizosphere	VSRPSWQLRDAALGYASRGIPVLPLHYPRPHHGDLQPLTDGRPLAGPAVGTGCSCRDPGCGQPGKHPIGALVPHGV
Ga0066683_107343772	3300005172	Soil	VSRHKVVMRDAALGYASRGIPVLPLHYPLPHHGDLQPANGRTLPSTASVCCSCRDPGCGQPA
Ga0058697_103166351	3300005562	Agave	MSRPSLLLRDAALAYASRGIPVLPLHYPLPHRGDLQTLTGDQQLPNPAMRTRCSCRDPGCGQPGKHPLG
Ga0058697_108081411	3300005562	Agave	VSRPRWQLRDAAVGYASRGIPVLPLHYPLPRHDDLQPIGGDQSPTLEAGCSCRDPGCGQVGKHPLGS
Ga0081538_101534241	3300005981	Tabebuia Heterophylla Rhizosphere	VSRPRWQLRDAAVGYAARGIPVLPLHHPLPYPSGLQPVADDHISAMARAGCSCRDPDCGQVAKHPLGS
Ga0081538_103081151	3300005981	Tabebuia Heterophylla Rhizosphere	VSRPRWQLRDAALGYASRGIPVLPLHYPLPHPTGLQPVPGDRKPAAGTGCSCRDPNCGQ
Ga0081538_103543442	3300005981	Tabebuia Heterophylla Rhizosphere	MRRPRLVLRDAALGYASRGIPVLPLHYPLPHHRDLQSADRRHLALPAPPVSCSCRDP
Ga0075428_1007069022	3300006844	Populus Rhizosphere	MSRPSLQLRDAALGYASLGIPVLPLHSPLPHRGDLQALTGGRPLGPNAAWTSCSCRDPSCGQPGKHPLGSLVPH
Ga0075421_1015219772	3300006845	Populus Rhizosphere	MRRFRLVLGDAALGYASRGIPVLPLHYPLPHRNGLQPVNDDQPVVGSGCSCRDPGCGQPGKHP
Ga0075420_1012150391	3300006853	Populus Rhizosphere	VSRSRWQLRDAAVGYVSRGIPVLPLHYPLPQRGDLQPVGGDQPPVLRAGCSCRDPDCGQVGKHPLGSLAPHGVTDATTNR
Ga0075418_118244811	3300009100	Populus Rhizosphere	MRRFRLVLGDAALGYASRGIPVLPLHYPLPHRNGLQPVNDDQPVVGSGCSCRDPGCG
Ga0075418_126701561	3300009100	Populus Rhizosphere	MSRPSWQLRDAALGYASRGIPVLPLHYPLPHHRGIQPVGDDGQQAHPEVGTGCSCRD
Ga0114129_110834512	3300009147	Populus Rhizosphere	MSRPSVALRDAALGYASRGIPVLPLHYPLPHHRGIQPVGDDGQQAHPEVGTGCSCRDPSCGQVAKHPLGCLVPHGVKD
Ga0114129_130642882	3300009147	Populus Rhizosphere	MSRPSLELRDAALGYASRGIPVLPLHYPLLPRGGLQPVTDDRPLPSPGVGAGCSCRDLGCGQVGKHPLGSLVPHGVKDA
Ga0111538_116278202	3300009156	Populus Rhizosphere	VSRPSWQLRDAALGYASRGIPVLPLHYPLPHRGDLQTFTEDQPLPSPAVRTSCSCRDPGCGQVGK
Ga0126307_100217496	3300009789	Serpentine Soil	VNRPRWQLRDAAVCYAARGIPVLPLHFPLPHRGGLQPVGGIDRPTLGAGCSCRDPGCGQPASTPWAA*
Ga0126307_101846813	3300009789	Serpentine Soil	MSRPSWQLRDAAMGYAARGIPVLPLHYPLPHRGNLQPVNADQQPAVRAGCSCRDPDCGQVGKHPVGSLVP
Ga0126307_102276553	3300009789	Serpentine Soil	VSRSRWQLRDAAVGYASRGIPVLPLHYPLPRHRDLQPVTGDQQPAVGVGCSCRDPG
Ga0126307_108308161	3300009789	Serpentine Soil	MSRPSWQLRDAALGYASRGIPVLPLHYPLPHHNDLQPVTDDGPPPNPAVGTGCSCRDPGCGQPAKHPLGSLVPHG
Ga0126307_110179132	3300009789	Serpentine Soil	VSRPSWQLRDAALGYASRSIPVLPLHYPLPHRSDLQQVPGDQPPAAWIGCSCRDPDCGQAGKHPLGRLVPHGVK
Ga0126313_111623682	3300009840	Serpentine Soil	VSRPSWQLRDAALGYASQGIPVLPLHYPLPHRSDLQPVTDPRLPSPMMGRGCSCRDPGCGQPGKH
Ga0126313_117728871	3300009840	Serpentine Soil	MNRSSWLLRDAALGYASRGIPVLPLHYPLPHHNDLQPAASDRPPPNPAVGTGCSCRDPGCGQPAKHPLG
Ga0126305_107568682	3300010036	Serpentine Soil	MSRPSWQLRDAAMGYAARGIPVLPLHYPLPHRGGLQPVGGNHPPTPGAGCSCRDPGCGQV
Ga0126305_112113962	3300010036	Serpentine Soil	MSRPSVVLRDAALGYASRGIPVLPLHYPLPHHSGVQPVTDDGQLAQPAVGTGCSCRDPHCAQVGKHPLGVLVPHGLK
Ga0126305_112663941	3300010036	Serpentine Soil	MSRRSLQLRDAALSYASRGIPVLPLHYPLPHRGDFQPVPGDQQPAVGTGCSCRDPGCGQIGKHPLGSLVPHGVKEATTNRARVL
Ga0126315_105746861	3300010038	Serpentine Soil	MSRPKVQLRDAALGYASRGIPVLPLHHPLPHHGGLQPVPGDQPPPVRTGCSCRDP
Ga0126312_103374842	3300010041	Serpentine Soil	VNRLRWQLRDAAVCYAARGIPVLPLHFPLPHRGGLQPVGGIDRPTLGAGCSCRDPGCGQPASTPWAA*
Ga0126312_106948341	3300010041	Serpentine Soil	VSRPRWQLRDTALGYASRSIPVLPLHYPLPHHGDLQPVPGDDQPALRTGCSCRDQG
Ga0126314_101904641	3300010042	Serpentine Soil	VSRPSWQLRDTALGYASRGIPVLPLHYPLPGHGDLQPVPGDDQPALRTGCSCRD
Ga0126314_106352882	3300010042	Serpentine Soil	MSGSWQLRDAALGYACHGIPVLPLHYPLPDRSGLQPVPGDRQPAVEGARCSCRDSNCGQVGKHPLESLVAHGVK
Ga0126314_107697181	3300010042	Serpentine Soil	MSRPSWELRDAALGYASRGIPVLPLHYSLPHRRGVQPVTDDGQLAHTAVGTGCSCRDHGCGQIGKHPLGSLVPNG
Ga0126314_107829382	3300010042	Serpentine Soil	MSRPKLRLLRDAALGYASRGIPVLPLHYPLPHHRDLQALTGDQQLPSPVVRTSCSCRDPGCGQVGKHPLGSLVPHGVKDA
Ga0126310_107737292	3300010044	Serpentine Soil	VSRPSWQLRDAALGYASRGIPVLPLHYPLPHHGDLQPVPGDQPPAVRTGCSCRDPGCGQPAKHP
Ga0126310_109885991	3300010044	Serpentine Soil	LSRPRWQLRDAAVGYAARGIPVLPLHYPVPHRGGLQPVGGNHPPTRGAACSCRDPDCGQVGKHPL
Ga0126310_118102461	3300010044	Serpentine Soil	VSRARWQLRDAAVGYAARGIPVLPLHYPLPHRTGLQPVPADPRPAADRASCSCRDADC
Ga0126311_104874982	3300010045	Serpentine Soil	VSRSRWQLRDAAVGYASRGIPVLPLHYPLPRHRDLQPVTGDQQPAVGVGCSCRDPGCGQV
Ga0126311_105305303	3300010045	Serpentine Soil	VSRPRFELRDAAVGYAARGIPVLPLHYPLPHRNSLQRVPGGPQAVVARAACSCRDPGCGHPAKHPLGSLVPHGVKD
Ga0126306_106527261	3300010166	Serpentine Soil	VSRPSSQLRDAALGYASRGIPVLPLHYPLPHRVGIQPVAGDRQLPSPDVKAGCSCRDPGCGQVGKHPLGSLVPHGV
Ga0126306_114610232	3300010166	Serpentine Soil	MVLRDAALGYASRGIPVLPLHYPLPHHRGVQPVTDNGRLAHTAVGTGCSCGDPSCGQVAKHPLG
Ga0137369_111024142	3300012355	Vadose Zone Soil	MSRPSWLLRDAALGYASRGIPVLPLHYPLPRHNDLQPATGDRPLPNPVVGTGCSCRDPGCGQPG
Ga0157372_129660292	3300013307	Corn Rhizosphere	VSRQRWQLRDAAVGYAARGIPVLPLHYPLPHRTGLDPVPGDPSAVLARAGCSCRDPSCGQVAKHP
Ga0182000_102072971	3300014487	Soil	MSRPSSLLRDAALGYASRGIPVLPLHYPLPHRGGLQPVTGDRPLAGPTPATGCSCRDPGCGQVGKHPLGSLVPHGLKE
Ga0163161_118145322	3300017792	Switchgrass Rhizosphere	VSRQRWQLRDAAVGYAARGIPVLPLHYPLPHRTGLDPVPGDPSAVLARAGCSCRDPSCG
Ga0184608_103787982	3300018028	Groundwater Sediment	VSRPSWQLRDAAVGYAARGIPVLPLHYPLPHHHGGLQPIPGDPQPAVERADCSCRDPHCGQVGKHPLGSLV
Ga0184608_104892951	3300018028	Groundwater Sediment	MSRPGWQLRDAALGYASRGIPVLPLHYPLPHRGDLQPVTHDRHLRSPAVGTGCSCRDPGCGQVGKHPLGSLVTHGVKDATTNRARILA
Ga0184621_103592472	3300018054	Groundwater Sediment	MSRPSSMLRDAALGYASRGIPVLPLHYPLPHQPGLQPVGGDRQLPSTAVGTGCSCRDP
Ga0184617_11383791	3300018066	Groundwater Sediment	MSRPSLLLRDAALGYASRGIPVLPLHYPLPHRSDLQALAGGRPLGPAAGSGCSCRDPGCSQVGKHPLGVLVPHG
Ga0184625_103512922	3300018081	Groundwater Sediment	LSRPRWQLRDSAVAYASRGIPVLPLHYPLPHPSGLQPVPRDSQPAEARADCSCRDPDCGQPAKHPLG
Ga0190274_120993192	3300018476	Soil	MSRLSLRDAALGYASRGIPVLPLHYPLPHHGDLQSVSNHQEPAVRTCCSCR
Ga0190267_102575871	3300019767	Soil	VSRASWLLRDAALGYASRGIPVLPLHYPLTHRGDLQPVTGDRPLAGPTPATGCSCRD
Ga0190267_107320751	3300019767	Soil	MSRPNWMLRDAALGYASRGIPVLPLHYPLPQHSNLQPVADDRQLPAPASGTGCSCRDPSCGQPGKHPLGSLVPHGIK
Ga0190267_114814502	3300019767	Soil	VSQSRWQLRDAALGYASRGIPVLPLHYPLPHRNDLQPVGGNHPPTPGAGCSCRDPGCG
Ga0190267_115135642	3300019767	Soil	MSRPSSVMRDAALGYASRGIPVLPLHHPLPHHSGIQPVTDDGQQAHSTVGRGCSCRDPHCGQPGKHPLGSLVPHGVKEATT
Ga0222621_11157561	3300021510	Groundwater Sediment	VSRRGWPLRDAALGYASRGIPVLPLHYPLPHHGDLQPVPDGQQLAEGIRCSCRDPACGQVGKHPIGSLVPHGVKDATTNR
Ga0222622_105751262	3300022756	Groundwater Sediment	MSRPCLLLRDAALSYASRGIPVLPLHHPFSHRGRLQLVPGDQPPALETGCSCRDPGCGQAAKHPLGSLVPHGVKDATTNRAHIL
Ga0209875_10423131	3300027209	Groundwater Sand	MSRPSWQLRDAALAYAARGIPVLPLHYPLPHRGDLQPLTGNGRPAIAAAGTRCSCRDPNCGQGGKHPL
Ga0209966_11370951	3300027695	Arabidopsis Thaliana Rhizosphere	VSRPSWQLRDAALGYASRGIPVLPLHYPLPHRSGLQPVAGDQQPLLGRTGCSCRDPG
Ga0207428_107451901	3300027907	Populus Rhizosphere	MSRPRWELRDAALGYASRGIPVLPLHYPLPHRIGLQPVTGNQHPAMRTGCSCRNPGCG
Ga0209382_104981073	3300027909	Populus Rhizosphere	MRRFRLVLGDAALGYASRGIPVLPLHYPLPHRNGLQPVNDDQPVVGSGCSCRDPGCGQPGKHPVGALVPHG
Ga0209382_112618062	3300027909	Populus Rhizosphere	MSRPRWQLRDAAVGYAARGIPVLPLHYPPHRTGLQPVPGDPQSAVARANCSCRDPGCGQPGKHPLGSL
Ga0247818_107720151	3300028589	Soil	VSRQRWQLRDAAVGYAARGIPVLPLHYPLPHRTGLDPVPGDPSAVLARAGCSCRDPSCGQVAK
Ga0307291_10823322	3300028707	Soil	MSRPSVLLRDAALGYASRGIPVLPLHYPLPHQRGIQPIGDDGQLAHPAVDTGCSCRDPDCGQVAKHPLGV
Ga0307295_102607361	3300028708	Soil	MTRPSWQLRDAALGYASRGIPVLPLHYPLPHRSGLQPVTGDQRLALGTGCSCRDPHCGQPAKHPLGSLAPHGVN
Ga0307313_101034302	3300028715	Soil	VSRPSWQLRDAALGYASRGIPVLPLHYPLPHHRGVQPVTDNGQQADPAVGAGCSCRDPDCGQVAKHPLG
Ga0307298_100255593	3300028717	Soil	VSRPSRRLRDAALGYASQGIPVLPLHYPLPHYGDLQPITGNQQLVTPAPATGCSCRDPGCGQPAKHPL
Ga0307315_101992012	3300028721	Soil	MSRPSLLLRDAALGYASRGIPVLPLHYPLPHRSDLQALAGGRPLGPAAGSGCS
Ga0307319_103266262	3300028722	Soil	MSRASWELRDAALGYASRGIPVLPLHSPLPHRDDLWPVGRDRHRPIPAGGTGCSCRDPGCGQPAKHPLGS
Ga0307318_103448181	3300028744	Soil	MSRPSLRLRDAALAYASRGIPVLPLHYPLPHHRGVQPVTSDGRLAHPAVGTGCSCRDPGCGQV
Ga0307318_103752951	3300028744	Soil	MSRPSVVLRDAALGYASRGIPVLPLYYPLPHHRGIQPVTDDRQQAHPTVGTGCSCRDPHCGQVA
Ga0307316_100771163	3300028755	Soil	MSRLSWQLRDAALGYASRGIPILPLHHPLPHHRDLQALNGDQQLPSPVVRTGCSCRDPGCGQPAKHPLGSLV
Ga0307316_101422981	3300028755	Soil	MSRPSLLLRDAALGYASRGIPVLPLHYPLPHRSDLQALAGGRPLGPAAGSGC
Ga0307316_102646841	3300028755	Soil	MSRPNLGLRDAALGYASRGIPVLPLHYPLPHHRGVQPVTDDGRLAHPAVGTGCSCRDPSCGQVGKHPFGVLVPHGLNE
Ga0307316_103381442	3300028755	Soil	MSRPCLLLRDAALSYASRGIPVLPLHHPFSHRGRLQLVPGDQPPALETGCLDFP
Ga0307320_100395193	3300028771	Soil	VSRLGWQLRDAAVGYASRGIPVLPLHYPLPHRGDLRVLPGDQQPPSPAVEARCSCRDPGCGQVGK
Ga0307320_101059382	3300028771	Soil	VSRPRWQLRDAALGYASRGIPVLPLHYPLPHRGDLQPVTGDQPQALGTGCS
Ga0307320_102120632	3300028771	Soil	VSRASWELRDAALSYASRGIPVLPLHYPLPHRGDLWPVGRDRHRPSPAVGLGCSCRDPGCGQVGKHPLGSLVPHGVKDATCNRAR
Ga0307320_104408611	3300028771	Soil	MSRPSVVLRDAALGYASRGIPVLPLHYPLPHHRGVQPVTDNGQLAHPAVATGCSCRDPSCGQVAKHPLGLL
Ga0307323_102393442	3300028787	Soil	VSRPSWQLRDAALGYASRGIPVLPLHYPLPHHRGVQPVTDNGQQADPAVGAGCSCRDPDCGQVAKHPLGSLVPHGLKDATTN
Ga0307290_101597481	3300028791	Soil	MTRPSWQLRDAALGYASRGIPVLPLHYPLPHRSGLQPVTGDQRLALGTGCSCRDPHCGQPAKHPLGSLAPHG
Ga0307290_101877092	3300028791	Soil	MSRLSWQLRDAALGYASRGIPILPLHHPLPHHRDLQALNGYQQLPSPVVRTGCSCRD
Ga0307299_101896242	3300028793	Soil	MSRPSLLLRDAALGYASRGIPVLPLHYPLPHRSDLQALAGGRPLGPAAGSGCSCRD
Ga0307299_103151052	3300028793	Soil	MSRPSVLLRDAALGYASRGIPVLPLHYPLPHQRGIQPIGDDGQLAHPAVDTGCSCRDPDCGQVAKHPLGVLVPHG
Ga0307287_103786121	3300028796	Soil	VSRPTWQLRDAALGYASRGIPVLPLHYPLPRRGDLQPVTGDHPPTVGTGCSCRDPGCGQPGKHPLGVLAPHGVKDATCNRAR
Ga0307292_101143671	3300028811	Soil	MTRPSWQLRDAALGYASRGIPVLPLHYPLPHRSGLQPVTGDQRLALGTGCSCRDPHCG
Ga0307292_103238162	3300028811	Soil	MSRPCLLLRDAALSYASRGIPVLPLHHPFSHRGRLQLVPGDQPPALETG
Ga0307292_105310331	3300028811	Soil	VSRRGWPLRDAALGYASRGIPVLPLHYPLPHHGDLQPVPDGQQLAEGIRCSCRDPA
Ga0307302_100740653	3300028814	Soil	VSRPRWQLRDTAVGYAVRGIPVLPLHYPLPHRSGLQPVPGDQPPPMRAGCSCRDLDCGQVGKHPVGSLVPHGVKDATCNRARILAWWT
Ga0307302_103456372	3300028814	Soil	VSRPNWELRDAALGYVCRGISVLPLHYPLPHRGDRPLGPSAPRTGCSCRDPGCSQVGKHPLGSLVPHGVKDATCNRAR
Ga0307302_104522422	3300028814	Soil	MSRPNLGLRDAAVGYASRGIPVLPLHYSLLHHRDLQALTVDQQLPSPVVGTGCSCRDPGCGQ
Ga0307302_105806231	3300028814	Soil	VSRPSWQLRDAAVGYAARGIPVLPLHYPLPHHHGGLQPIPGDPQPAVERADCSCRDPHCGQVGKHPLGSLVPYGVKDA
Ga0307302_106119191	3300028814	Soil	MSRPSLRLRDAALGYASRGIPVLPLHYPLPHHRGVQPVTSDGRLAHPAVGTGCSC
Ga0307302_106760051	3300028814	Soil	MSRLIVMLRDAALGYASRGIPVLPLHYPLPHRRDLQALTGDQQLPSPAVRTSCSCRD
Ga0307289_100664691	3300028875	Soil	MTRPSWQLRDAALGYASRGIPVLPLHYPLPHRSGLQPVTGDQRLALGTGCSCRDPHCGQPAKHPL
Ga0307286_103173031	3300028876	Soil	MTRPSWQLRDAALGYASRGIPVLPLHYPLPHRSGLQPVTGDQRLALGTGCSCRDP
Ga0307286_103696161	3300028876	Soil	VSRASWELRDAALSYASRGIPVLPLHYPLPHRGDLWPVGRDRHRPSPAVGLGCSCRDPGCGQVGKHPLGSLVPHGVKDATCN
Ga0307278_104256892	3300028878	Soil	VSRPNWQLRDAALGYASRGIPVLPLHYPLPHHRGVQPVTDDGQLAHPAVDTGCSCRDPNCGQVAKHPLGVLVPHGLKEATTN
Ga0307300_100681011	3300028880	Soil	VSRRGWPLRDAALGYASRGIPVLPLHYPLPHHGDLQPVPDGQQLAEGIRCSCRDPACGQVGKHPIG
Ga0307304_102478851	3300028885	Soil	MSRPSVLLRDAALGYASRGIPVLPLHYPLPHRSDLQAFTGDQPLPSSAAQTRCSCRDPGCGQVGKHPLGSLVP
Ga0268253_101633202	3300030514	Agave	VSRPRWQLRDAALGFASRGIPVLPLHYPLPHRNGLQPVPEDQRPPLRTGCSCRDPGCGQSAKHPLGSLVPHGVKDATTNRARILA
Ga0307408_1007700431	3300031548	Rhizosphere	VSRPSRRLRDAALGYASQGIPVLPLHYPLPHRSDLQPITGNQQLVTPAPATGCSCRDPGCGQPAKHPLGSLVPH
Ga0307408_1019488172	3300031548	Rhizosphere	MSRPNLGLRDAALGYASRGIPVLPLHYPLPHHSDLQALTSDQQLPSPVVRTSCSCRDPGCGQPAKHPLGSLVPHGVKDATTNRAR
Ga0307408_1020487861	3300031548	Rhizosphere	MSRPDLGLRDAALSYASRGIPVLPVHYPLPHHRDLQPVPGDQQPAVGTGCSCRDLG
Ga0307405_101080511	3300031731	Rhizosphere	MSRPSWELRDAALGYASRGIPVLPLHYSLPHRRGVQPVTDDGQLAHTAVGTGCSCRDPGCGQIGKHPLGSLVPNGV
Ga0307405_102699632	3300031731	Rhizosphere	LSRPRWQLRDAAVGYAARGIPVLPLHYPVPHRGGLQPVGGNHPPTRGAACSCRDPDCGQVGKHPLGSLVPHGVNDAPAIGRGS
Ga0307405_104067422	3300031731	Rhizosphere	MSRPSLVLRDAALGYASRGIPVLPLHYPLPHHRGVQPVGDDRQFAHLAVGTGCSCRDPHCGQPGKHPL
Ga0307405_107727461	3300031731	Rhizosphere	MSRPRLQLRDAALGYASLGIPVLPLHYPLPHRVDLQPVTGDRQLPSPAVGIGCSCRDPGCGQPAKHPLGNLVP
Ga0307405_116644451	3300031731	Rhizosphere	MSRRSLQLRDAALSYASRGIPVLPLHSPLPHRGHFQPVPGDHQPVVGTGCSCRDPGCSQVGKHPLGSLVPH
Ga0307405_118818462	3300031731	Rhizosphere	MSRPDWQLRDAALGYASRGIPVLPLHYPLPDRSDLQPVGGNRQPAMGVGCSC
Ga0307413_112718632	3300031824	Rhizosphere	VSRPSWQLRDAALGYASCGIPVLPLHYPLPHRNNLQALTEDQQLPGPAGGSGCSCRDPSCGQVGKHPLGSLVPHGVKDATTNRARV
Ga0307413_114048111	3300031824	Rhizosphere	MSRPDWQLRDAALGYASRGIPVLPLHYPLPDRSDLQPVGGNRQPAMGVGCSCRDPGCGQVGKHPLSTLVPH
Ga0307413_118046872	3300031824	Rhizosphere	VSRPRWQLRDAALGYASHGIPVLPLHYPLPHRNGLQPVPGDARPAVARAACSCRDPGCGQVAKHPLGSLVP
Ga0307413_118612672	3300031824	Rhizosphere	LSRPRWQLRDAAVGYAARGIPVLPLHYPVPHRGGLQPVGGNHPPTRGAACSCRDPDCGQVGKHPLGSLVPHGVNDATCNRAR
Ga0307410_103269341	3300031852	Rhizosphere	MSRPSWELRDAALGYASRGIPVLPLHYSLPHRRGVQPVTDDGQLAHTAVGTGCSCRDPGCGQIGKHPLGSL
Ga0307410_103635931	3300031852	Rhizosphere	MSRRSLQLRDAALSYASRGIPVLPLHSPLPHRGHFQPVPGDHQPVVGTGCSCRDPGCSQVGKHPLGSL
Ga0307410_107354061	3300031852	Rhizosphere	VSRPRWQLRDAALGYASRGIPVLPLHYPLPHRNGLQPVPGSPQPAVARVACSCRDPD
Ga0307410_113828981	3300031852	Rhizosphere	VSRPSWQLRDAALGYASRGIPVLPLHYPLPHHGDLQPIPGDQPPPAKAGCSCRDPSCGQPAKHPLGSLVPHG
Ga0307410_116072881	3300031852	Rhizosphere	MSRPDLGLRDAAVGYASRGIPVLPLHHPLPHHRDLQARTDDHQLPSPAVWTSCSCRDPGCGQV
Ga0307410_116730011	3300031852	Rhizosphere	VSRPRLQLRDAALGYASRRIPVLPLHYPLPHHRGVQPVTDDGWLAHIAVDTGCSCRDPHCGQVAK
Ga0307406_118550951	3300031901	Rhizosphere	VNRPRWLLRDAALGYASRGIPVLPLHHPLPHHGSLQPVGGDQPPALATGCSCRDP
Ga0307407_101908731	3300031903	Rhizosphere	MSRPSWELRDAALGYASRGIPVLPLHYSLPHRRGVQPVTDDGQLAHTAVGTGCSCRDPGCGQIGKHPL
Ga0307407_105208892	3300031903	Rhizosphere	VSRPRWLLRDAALGYASRGIPVLPLHHPLPRPSGLQPVTGDPQPGVGSGCSCRDPGC
Ga0307407_111993261	3300031903	Rhizosphere	MSRLGWRLRDAALGYASRGIPVLPLHFPLPHRGDLQPVTDDRHLPSPAVGTGCSCRDPGCGQVGKHPLG
Ga0307407_113620481	3300031903	Rhizosphere	QLRDAAVGYAARGIPVLPLHYPVPHRGGLQPVGGNHPPTRGAACSCRDPDCGQVGKHPLGSLVPHGVNDAPAIGRGS
Ga0307407_117094461	3300031903	Rhizosphere	MSRPSSVMRDAALGYASRGIPVLPLHYPFPHHGDLQPVTGDQPLAVRTGCSCRDPGCGQPAKHPLGA
Ga0307412_111091592	3300031911	Rhizosphere	VSRPSRQLRDAALGYASRGIPVLPLHYPPPHHRGVQPVTDDGQLAHTAVGTGCSCR
Ga0307409_1004502181	3300031995	Rhizosphere	VSRPRWQLRDAALGYASHGIPVLPLHYPLPHRNGLQPVPGDARPAVARAACSCRDPGCGQVAKHPLGSLVPHGVKDAT
Ga0307409_1009161492	3300031995	Rhizosphere	MSRPTLLRDVALGYASRGIPVLPLHYPLPHHNGVQPVTNDDGQLAHPAVGTGCSCRDPGCGQVGKHPLGSLVAHGLKEA
Ga0307409_1012315862	3300031995	Rhizosphere	MSRPSVVLRDAALGYASRGIPVLPLHYPLPDRHDLQPVGGTQPLPDPAAGPGCSCRDPGCGQPAKHPLGALVPHGVNDAT
Ga0307409_1013584571	3300031995	Rhizosphere	MSRPRWRLRDVALGYASRGIPVLPLHYPLPHRSSLQPVDVNQQPHPVVGSGCSCRDLSCGQVGKHPLGSLV
Ga0307409_1023523551	3300031995	Rhizosphere	MSRPKLMLRDAALGYASRGIPVLPLHYPLPYHSGIQPITSDGQLAHPAVETGCSCRDPHCGQVAKHPLGSLVPHGL
Ga0307409_1029613351	3300031995	Rhizosphere	VSRPSWQLRDAALGYASRGIPVLPLHYPLLHRGDLQALTGDRPLVPAAPTGCSCRDP
Ga0307416_1003914053	3300032002	Rhizosphere	VNRLRWQLRDAAVCYAARGIPVLPLHYPLPHRGGLQPVGGIHRPTLGTGCSCRDPACGQVGKHPLGSLVPHGAKDATTNRARVL
Ga0307416_1006752771	3300032002	Rhizosphere	MSRPSLQLRDAALGYASRGIPVLPLHYPLPHHRGVQPVTDDGQQAHPAMGAGCSCRDPSCGQPGKHP
Ga0307416_1023236881	3300032002	Rhizosphere	MSRPNLQLRDAALGYASRGIPVLPLHYPLPHRSDLEGLAGDQSLRPSTPSGSCSCRDLGCSQVG
Ga0307416_1026599471	3300032002	Rhizosphere	VSRPSLLLRDAALGYASRGIPVLPLHNPLPHHGDLQPVTGDHQPAVGTGCSCRDPGCGQPGKHPL
Ga0307416_1036658341	3300032002	Rhizosphere	MSRPHLMLRDAALGYASRGIPVLPLHYPLPHRRGVQPVTDDRQLAHPAVGTGCSCRDPGCGQIAK
Ga0307414_112651662	3300032004	Rhizosphere	MSRRSLQLRDAALSYASRGIPVLPLHYPLPHRGDFQPVPGDQQPVVGTGCSCRDPGCGQVGKHPLGSLVPHG
Ga0307414_114266121	3300032004	Rhizosphere	MSRPSVVLRDAALGYASRGIPVLPLHYPLPDRHDLQPVGGTQPLPDPAAGPGC
Ga0307411_109312142	3300032005	Rhizosphere	VSRPSWRLRDAAVGYAARGIPVLPLHYPLPQRDDLQPLTGDQSPAPGTGCSCRDPGCGQVGKHPLGSLVPHGVSDATCNRARI
Ga0307415_1001680943	3300032126	Rhizosphere	VSRPRWELRDAAVAYASRGIPVLPLHYPLPPRSGLQPVPSDSQPAVARVGCSCRDPGCGQVGKHPL
Ga0307415_1002906483	3300032126	Rhizosphere	MRRPSWQLRDAALGYASRGIPVLPLHYPLPHQGDLHALTGGRQLPGPVEAMRCSCRDPGCGQPGKHPLGSLVPHGVN
Ga0307415_1005752151	3300032126	Rhizosphere	MSRPSLVLRDAALGYASRGIPVLPLHYPLPHHRGVQPVGDDRQFAHLAVGTGCSCRDPHCGQPGKH
Ga0307415_1006087232	3300032126	Rhizosphere	MSRPSLQLRDAALGYASRGIPVLPLHYPLPQRNDLQSLTGGGPLIPSTPWTSCSCRNPGCGQAGKHPLGSLVPHGVKD
Ga0307415_1010832431	3300032126	Rhizosphere	VSRPSLVLRDAALGYASRGIPVLPLHHPLPHRDLQALSGSRQQPSSVAGSVCSC
Ga0307415_1014731752	3300032126	Rhizosphere	VSRHSWLLRDAALGYASRGIPVLPLHYPLPYHGDLRPVPGDKRLAEGICCSCQDP
Ga0307415_1017457971	3300032126	Rhizosphere	MSRPRWQLRDAALGYASRGILVLPLHYPLPHHGDLQPVDGRRLAPSVPPVGCSCRDPGCGQPGKHPL
Ga0268251_102041421	3300032159	Agave	MSRPSLLLRDAALAYASRGIPVLPLHYPLPHRGDLQTLTGDQQLPNPAMRTRCSCRDPGCGQPGKPPLGALAPHG
Ga0268251_103325871	3300032159	Agave	MSRPRWQLRDAALGYASRGIPVLPLHYPLPHHRGVQPLTDDGQLTHPAVGTGCSCRDPSCGQVAKHPLGSL
Ga0334932_039512_1_234	3300034174	Sub-Biocrust Soil	MSRPSWLLRDAALGYASRGIPVLPLHYPLPHRNGLQPGRGNHPPTLGAGCSCRDPGCGQVGKHPLGSLVPHGVKDATC
Ga0334931_042862_830_997	3300034377	Sub-Biocrust Soil	MSLPRWQLRDAALGYASRGIPVLPLHYPLFHHGGLQPVPGDQSLPVPTGCSCRDPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F046709

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences