NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F046702

Metagenome / Metatranscriptome Family F046702

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F046702
Family Type Metagenome / Metatranscriptome
Number of Sequences 151
Average Sequence Length 76 residues
Representative Sequence MTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFRRR
Number of Associated Samples 110
Number of Associated Scaffolds 151

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 69.54 %
% of genes near scaffold ends (potentially truncated) 20.53 %
% of genes from short scaffolds (< 2000 bps) 76.16 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.013 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(16.556 % of family members)
Environment Ontology (ENVO) Unclassified
(22.517 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(51.656 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 52.94%    β-sheet: 0.00%    Coil/Unstructured: 47.06%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 151 Family Scaffolds
PF13411MerR_1 35.10
PF00376MerR 9.27
PF135322OG-FeII_Oxy_2 3.31
PF00583Acetyltransf_1 2.65
PF06094GGACT 1.32
PF09278MerR-DNA-bind 1.32
PF02517Rce1-like 1.32
PF07687M20_dimer 1.32
PF01797Y1_Tnp 1.32
PF07859Abhydrolase_3 0.66
PF02771Acyl-CoA_dh_N 0.66
PF02633Creatininase 0.66
PF00135COesterase 0.66
PF04229GrpB 0.66
PF08327AHSA1 0.66
PF03404Mo-co_dimer 0.66
PF00144Beta-lactamase 0.66
PF03721UDPG_MGDP_dh_N 0.66
PF04909Amidohydro_2 0.66
PF13649Methyltransf_25 0.66
PF05552TM_helix 0.66
PF06452CBM9_1 0.66
PF00590TP_methylase 0.66
PF03425CBM_11 0.66
PF07883Cupin_2 0.66
PF01977UbiD 0.66
PF01047MarR 0.66
PF00702Hydrolase 0.66
PF04255DUF433 0.66
PF13561adh_short_C2 0.66
PF04199Cyclase 0.66
PF03551PadR 0.66
PF13474SnoaL_3 0.66
PF13376OmdA 0.66
PF12680SnoaL_2 0.66
PF13578Methyltransf_24 0.66

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 151 Family Scaffolds
COG0789DNA-binding transcriptional regulator, MerR familyTranscription [K] 1.32
COG1266Membrane protease YdiL, CAAX protease familyPosttranslational modification, protein turnover, chaperones [O] 1.32
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 1.32
COG4449Predicted protease, Abi (CAAX) familyGeneral function prediction only [R] 1.32
COG00433-polyprenyl-4-hydroxybenzoate decarboxylaseCoenzyme transport and metabolism [H] 0.66
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.66
COG0657Acetyl esterase/lipaseLipid transport and metabolism [I] 0.66
COG0668Small-conductance mechanosensitive channelCell wall/membrane/envelope biogenesis [M] 0.66
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.66
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 0.66
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 0.66
COG1402Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)Coenzyme transport and metabolism [H] 0.66
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.66
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.66
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.66
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.66
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.66
COG1878Kynurenine formamidaseAmino acid transport and metabolism [E] 0.66
COG1893Ketopantoate reductaseCoenzyme transport and metabolism [H] 0.66
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.66
COG2272Carboxylesterase type BLipid transport and metabolism [I] 0.66
COG2320GrpB domain, predicted nucleotidyltransferase, UPF0157 familyGeneral function prediction only [R] 0.66
COG2367Beta-lactamase class ADefense mechanisms [V] 0.66
COG2442Predicted antitoxin component of a toxin-antitoxin system, DUF433 familyDefense mechanisms [V] 0.66
COG3264Small-conductance mechanosensitive channel MscKCell wall/membrane/envelope biogenesis [M] 0.66

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.01 %
UnclassifiedrootN/A1.99 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886013|SwBSRL2_contig_8051428Not Available808Open in IMG/M
3300000559|F14TC_100370624All Organisms → cellular organisms → Bacteria2834Open in IMG/M
3300001431|F14TB_107607444All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium738Open in IMG/M
3300002121|C687J26615_10030771All Organisms → cellular organisms → Bacteria1332Open in IMG/M
3300003319|soilL2_10046344All Organisms → cellular organisms → Bacteria2915Open in IMG/M
3300004463|Ga0063356_103722250All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium657Open in IMG/M
3300004463|Ga0063356_103912318Not Available641Open in IMG/M
3300005093|Ga0062594_102618641All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium557Open in IMG/M
3300005180|Ga0066685_10107264All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1871Open in IMG/M
3300005181|Ga0066678_10333725All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium998Open in IMG/M
3300005289|Ga0065704_10403790All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium749Open in IMG/M
3300005289|Ga0065704_10756868All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium540Open in IMG/M
3300005293|Ga0065715_10068040All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium648Open in IMG/M
3300005295|Ga0065707_11023516All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300005332|Ga0066388_100406427All Organisms → cellular organisms → Bacteria2006Open in IMG/M
3300005334|Ga0068869_101802961All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium547Open in IMG/M
3300005336|Ga0070680_100093761All Organisms → cellular organisms → Bacteria2488Open in IMG/M
3300005353|Ga0070669_100344416All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1208Open in IMG/M
3300005354|Ga0070675_101878594All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium552Open in IMG/M
3300005365|Ga0070688_100669311All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium801Open in IMG/M
3300005367|Ga0070667_101372268All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium663Open in IMG/M
3300005440|Ga0070705_100736098All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium778Open in IMG/M
3300005440|Ga0070705_100918886All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium705Open in IMG/M
3300005441|Ga0070700_101551406All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300005446|Ga0066686_10245168All Organisms → cellular organisms → Bacteria1209Open in IMG/M
3300005450|Ga0066682_10387417All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium897Open in IMG/M
3300005457|Ga0070662_101168499All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium661Open in IMG/M
3300005459|Ga0068867_100950752All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300005467|Ga0070706_100654448All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium975Open in IMG/M
3300005471|Ga0070698_100008596All Organisms → cellular organisms → Bacteria11007Open in IMG/M
3300005471|Ga0070698_100383050All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1339Open in IMG/M
3300005471|Ga0070698_100488860All Organisms → cellular organisms → Bacteria1168Open in IMG/M
3300005471|Ga0070698_100661338All Organisms → cellular organisms → Bacteria986Open in IMG/M
3300005518|Ga0070699_100076217All Organisms → cellular organisms → Bacteria2919Open in IMG/M
3300005518|Ga0070699_100374341All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1285Open in IMG/M
3300005518|Ga0070699_100972419All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium778Open in IMG/M
3300005544|Ga0070686_100839759All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium743Open in IMG/M
3300005713|Ga0066905_100443634All Organisms → cellular organisms → Bacteria1065Open in IMG/M
3300005843|Ga0068860_100291792All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1596Open in IMG/M
3300006844|Ga0075428_100054663All Organisms → cellular organisms → Bacteria4375Open in IMG/M
3300006844|Ga0075428_100393790All Organisms → cellular organisms → Bacteria1485Open in IMG/M
3300006845|Ga0075421_102126317All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300006846|Ga0075430_101431694All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300006852|Ga0075433_10072108All Organisms → cellular organisms → Bacteria3036Open in IMG/M
3300006852|Ga0075433_10083745All Organisms → cellular organisms → Bacteria2815Open in IMG/M
3300006852|Ga0075433_11898973All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300006853|Ga0075420_100296691All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1402Open in IMG/M
3300006871|Ga0075434_100154984All Organisms → cellular organisms → Bacteria2310Open in IMG/M
3300006871|Ga0075434_100617988All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1102Open in IMG/M
3300006876|Ga0079217_10434722All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300006876|Ga0079217_10692817All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300006880|Ga0075429_100028063All Organisms → cellular organisms → Bacteria → Proteobacteria4885Open in IMG/M
3300006881|Ga0068865_100660749All Organisms → cellular organisms → Bacteria889Open in IMG/M
3300007004|Ga0079218_10039609All Organisms → cellular organisms → Bacteria2827Open in IMG/M
3300007004|Ga0079218_10085725All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2110Open in IMG/M
3300007004|Ga0079218_10127027All Organisms → cellular organisms → Bacteria1813Open in IMG/M
3300007004|Ga0079218_10328498All Organisms → cellular organisms → Bacteria1260Open in IMG/M
3300007004|Ga0079218_12082749All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300007255|Ga0099791_10502257All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium589Open in IMG/M
3300009012|Ga0066710_100036597All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria5839Open in IMG/M
3300009012|Ga0066710_100288536All Organisms → cellular organisms → Bacteria2397Open in IMG/M
3300009090|Ga0099827_10693928All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium880Open in IMG/M
3300009094|Ga0111539_10005065All Organisms → cellular organisms → Bacteria17116Open in IMG/M
3300009094|Ga0111539_12126054All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium651Open in IMG/M
3300009098|Ga0105245_12554231All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300009137|Ga0066709_104467661All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium511Open in IMG/M
3300009147|Ga0114129_10000108All Organisms → cellular organisms → Bacteria81939Open in IMG/M
3300009147|Ga0114129_10112403All Organisms → cellular organisms → Bacteria3756Open in IMG/M
3300009147|Ga0114129_10173930All Organisms → cellular organisms → Bacteria2933Open in IMG/M
3300009147|Ga0114129_10359003All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1928Open in IMG/M
3300009147|Ga0114129_10684736Not Available1319Open in IMG/M
3300009148|Ga0105243_10688330All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium995Open in IMG/M
3300009156|Ga0111538_10001125All Organisms → cellular organisms → Bacteria37563Open in IMG/M
3300009156|Ga0111538_11381849All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300009162|Ga0075423_10019336All Organisms → cellular organisms → Bacteria → Proteobacteria6740Open in IMG/M
3300009162|Ga0075423_11713364All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium677Open in IMG/M
3300009553|Ga0105249_13357756All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M
3300009553|Ga0105249_13576614All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium501Open in IMG/M
3300009789|Ga0126307_10155547All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1831Open in IMG/M
3300010036|Ga0126305_10023418All Organisms → cellular organisms → Bacteria3285Open in IMG/M
3300010047|Ga0126382_12185247All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium532Open in IMG/M
3300010359|Ga0126376_10002098All Organisms → cellular organisms → Bacteria11159Open in IMG/M
3300010399|Ga0134127_13567909All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300010400|Ga0134122_10639822All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium989Open in IMG/M
3300010400|Ga0134122_11892346All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium631Open in IMG/M
3300011429|Ga0137455_1025761All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1615Open in IMG/M
3300011434|Ga0137464_1076310All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium966Open in IMG/M
3300011440|Ga0137433_1113605All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium854Open in IMG/M
3300012360|Ga0137375_11455833All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300012917|Ga0137395_10000573All Organisms → cellular organisms → Bacteria15699Open in IMG/M
3300013306|Ga0163162_11659352All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium730Open in IMG/M
3300013306|Ga0163162_12834994All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium558Open in IMG/M
3300014326|Ga0157380_11327471All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium767Open in IMG/M
3300015258|Ga0180093_1080994All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium774Open in IMG/M
3300015359|Ga0134085_10344720All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium661Open in IMG/M
3300015374|Ga0132255_104564111All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium587Open in IMG/M
3300018083|Ga0184628_10099857All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1492Open in IMG/M
3300018476|Ga0190274_10188802All Organisms → cellular organisms → Bacteria1796Open in IMG/M
3300018481|Ga0190271_10035291All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4094Open in IMG/M
3300019360|Ga0187894_10000810All Organisms → cellular organisms → Bacteria42161Open in IMG/M
3300021080|Ga0210382_10318089All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium685Open in IMG/M
3300021082|Ga0210380_10052053All Organisms → cellular organisms → Bacteria1769Open in IMG/M
(restricted) 3300023208|Ga0233424_10041557All Organisms → cellular organisms → Bacteria2174Open in IMG/M
3300025160|Ga0209109_10013675All Organisms → cellular organisms → Bacteria4364Open in IMG/M
3300025893|Ga0207682_10301641All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium751Open in IMG/M
3300025908|Ga0207643_10241664All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1110Open in IMG/M
3300025917|Ga0207660_10240928All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1425Open in IMG/M
3300025922|Ga0207646_10014277All Organisms → cellular organisms → Bacteria7552Open in IMG/M
3300025922|Ga0207646_11155346All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium680Open in IMG/M
3300025923|Ga0207681_10338250All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1202Open in IMG/M
3300025930|Ga0207701_10410005All Organisms → cellular organisms → Bacteria1166Open in IMG/M
3300025933|Ga0207706_10684654All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium877Open in IMG/M
3300026089|Ga0207648_10224959All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1668Open in IMG/M
3300026324|Ga0209470_1191177All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium875Open in IMG/M
3300027880|Ga0209481_10361191All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium742Open in IMG/M
3300027886|Ga0209486_10023267All Organisms → cellular organisms → Bacteria2919Open in IMG/M
3300027886|Ga0209486_10390326All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300027886|Ga0209486_10590592All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium703Open in IMG/M
3300027907|Ga0207428_10010425All Organisms → cellular organisms → Bacteria8300Open in IMG/M
3300027907|Ga0207428_10112951All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2089Open in IMG/M
3300028381|Ga0268264_10082920All Organisms → cellular organisms → Bacteria2745Open in IMG/M
3300028597|Ga0247820_10903858All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium626Open in IMG/M
3300031226|Ga0307497_10129928All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1021Open in IMG/M
3300031538|Ga0310888_10016966All Organisms → cellular organisms → Bacteria2957Open in IMG/M
3300031538|Ga0310888_11080611All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300031547|Ga0310887_11146263All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300031562|Ga0310886_10025611All Organisms → cellular organisms → Bacteria2427Open in IMG/M
3300031562|Ga0310886_10346625All Organisms → cellular organisms → Bacteria862Open in IMG/M
3300031562|Ga0310886_10583119All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300031740|Ga0307468_100999023All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium736Open in IMG/M
3300031740|Ga0307468_101054927All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium720Open in IMG/M
3300031847|Ga0310907_10038147All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1786Open in IMG/M
3300031854|Ga0310904_10812050All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium655Open in IMG/M
3300031892|Ga0310893_10021508All Organisms → cellular organisms → Bacteria1905Open in IMG/M
3300031892|Ga0310893_10099892All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1063Open in IMG/M
3300031908|Ga0310900_10201706All Organisms → cellular organisms → Bacteria1397Open in IMG/M
3300031908|Ga0310900_10471204All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium970Open in IMG/M
3300031908|Ga0310900_11237440All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium622Open in IMG/M
3300031908|Ga0310900_11787711All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium523Open in IMG/M
3300031943|Ga0310885_10030543All Organisms → cellular organisms → Bacteria2098Open in IMG/M
3300031944|Ga0310884_10358762All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium828Open in IMG/M
3300032003|Ga0310897_10343285All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium693Open in IMG/M
3300032012|Ga0310902_10888479All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium613Open in IMG/M
3300032075|Ga0310890_10490691All Organisms → cellular organisms → Bacteria932Open in IMG/M
3300033550|Ga0247829_11685211All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium523Open in IMG/M
3300033551|Ga0247830_10157568All Organisms → cellular organisms → Bacteria1665Open in IMG/M
3300033551|Ga0247830_11059142All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium647Open in IMG/M
3300033811|Ga0364924_123395All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium599Open in IMG/M
3300034115|Ga0364945_0290036All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300034147|Ga0364925_0036628All Organisms → cellular organisms → Bacteria1629Open in IMG/M
3300034675|Ga0314800_076726All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere16.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil15.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere8.61%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil6.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.31%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.31%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.65%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.99%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.99%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.99%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.99%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.32%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.32%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.32%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.32%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.32%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.32%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.32%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.32%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.32%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere1.32%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.32%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.32%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.32%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.32%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.32%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.32%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.32%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.66%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.66%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.66%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.66%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.66%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.66%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks0.66%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.66%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.66%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.66%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886013Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300002121Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1EnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011429Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2EnvironmentalOpen in IMG/M
3300011434Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2EnvironmentalOpen in IMG/M
3300011440Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2EnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015258Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1DaEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019360White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaGEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300023208 (restricted)Freshwater microbial communities from Lake Towuti, South Sulawesi, Indonesia - Watercolumn_Towuti2014_125_MGEnvironmentalOpen in IMG/M
3300025160Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300033811Sediment microbial communities from East River floodplain, Colorado, United States - 28_j17EnvironmentalOpen in IMG/M
3300034115Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17EnvironmentalOpen in IMG/M
3300034147Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17EnvironmentalOpen in IMG/M
3300034675Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
SwBSRL2_0031.000012502162886013Switchgrass RhizosphereMDVPPIVKAAVIVTFFNTWVLFEETVVDRYGLWQYMPYYRVARLCSWDVGAIALITFVVVRALHRRRQN
F14TC_10037062443300000559SoilMTAQDAQSDTTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAIVLLGFIVWRVFRRR*
F14TB_10760744423300001431SoilMKTPGIIQFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLLGFVVWRFFRGGKGATSPPPSRIAE*
C687J26615_1003077123300002121SoilMPEQEPTPVKAPRIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLLGFVVWWLFRGRKASAAQTT*
soilL2_1004634463300003319Sugarcane Root And Bulk SoilMTAQDTASARTPGIVPFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRAVRRR*
Ga0063356_10372225023300004463Arabidopsis Thaliana RhizosphereMQTPRIVQFAIWLTFFNTWVLFEETVIDRYGLWEYMPYYRVGRLCSWDIGAMALLGYIVWAALRQRPRQ*
Ga0063356_10391231823300004463Arabidopsis Thaliana RhizosphereMPPDDRTKTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALFGYLVWRFFRRPKAA*
Ga0062594_10261864113300005093SoilMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFRKTSFQAM*
Ga0066685_1010726433300005180SoilMTPQETEAKRTPGIVRFAVWLTFLNTWVLFEETVVDRYGLWQYMPYYRVAKFCLWDIGAMALLGFLVWRFFPRRRGA*
Ga0066678_1033372513300005181SoilMTLQDAQAMKMPGIIRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMALLGFIVWRFVRRRKAG*
Ga0065704_1040379023300005289Switchgrass RhizosphereMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFRRR*
Ga0065704_1075686823300005289Switchgrass RhizosphereMLPQPPQSSTLPGVVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCAWDIGAMALLGFVVWRLLRRRKAA*
Ga0065715_1006804013300005293Miscanthus RhizosphereMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVW
Ga0065707_1102351623300005295Switchgrass RhizosphereGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLLAFIVWRVFRRR*
Ga0066388_10040642723300005332Tropical Forest SoilMKRIVADNKARVPPIVKFAVWLTFFNTWVLFEETVVDRYGLWQYMPYYRVARLCSWDIGVMALLGFLIWWFLRGRKFN*
Ga0068869_10180296123300005334Miscanthus RhizosphereMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLLGIVWRVFKRR*
Ga0070680_10009376133300005336Corn RhizosphereMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLLGFIVWRVFRRR*
Ga0070669_10034441623300005353Switchgrass RhizosphereMLPQPPQSSTLPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFVVWRLFRPRRAA*
Ga0070675_10187859413300005354Miscanthus RhizosphereMLPQPPQSSTLPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGTMALLGFVVWRLLRRRKAA*
Ga0070688_10066931123300005365Switchgrass RhizosphereMTAQDAQSAMTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFRKTSFQAM*
Ga0070667_10137226823300005367Switchgrass RhizosphereMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFRRHSRRSP*
Ga0070705_10073609823300005440Corn, Switchgrass And Miscanthus RhizosphereMAAPTPLPGRTPRIVRIAVWLTFLNTWVLFEEIVVDRSGLWKYMPLYRVGRFCPWDVGAIVVISFIVWWSFRERKAA*
Ga0070705_10091888623300005440Corn, Switchgrass And Miscanthus RhizosphereMTTPDMLSARTPGIVRFAIWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFRRHSRRSP*
Ga0070700_10155140613300005441Corn, Switchgrass And Miscanthus RhizosphereMTTPDMLSARTPGIVRFAIWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLIGWLVWRMLGRHRRRVDLA*
Ga0066686_1024516823300005446SoilMAPQELPTMKTPGIVRFAAWLTFFNTWVLFEETVVDRYGLWKYMPYYRVGKLCSWDIGAMALLGFIVWRLLRGRKVA*
Ga0066682_1038741713300005450SoilMTPQETEAKRTPGIVRFAVWLTFLNTWVLFEETVVDRYGLWQYMPYYRVAKFCLWDIGAMALLGFLVWRFFPRRR
Ga0070662_10116849923300005457Corn RhizosphereMQTPRIVQFAIWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFRKTSFQAM*
Ga0068867_10095075223300005459Miscanthus RhizosphereMRTPGIVRAAVWLTFFNTWVLFEEIVVDRYGLWEYMPYYRVGKLCSWDIGAMAVLGFVVWRFFRPGKAA*
Ga0070706_10065444823300005467Corn, Switchgrass And Miscanthus RhizosphereMTLQDTQQTKTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMAVLGFVVWRFFRGRKAA*
Ga0070698_10000859633300005471Corn, Switchgrass And Miscanthus RhizosphereMAAPTPLPGRTPRIVRIAVWLTFLNTWVLFEEIVVDRSGLWKYMPLYRAGRFCPWDVGAIVVISFIVWWSFRERKAA*
Ga0070698_10038305023300005471Corn, Switchgrass And Miscanthus RhizosphereMTTNETSATKTPRIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMALLGFLVWWFFRGRKSRSSESDAAP*
Ga0070698_10048886023300005471Corn, Switchgrass And Miscanthus RhizosphereVTQQPESLRLPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLLGFVVWRFLGRRRAG*
Ga0070698_10066133833300005471Corn, Switchgrass And Miscanthus RhizosphereMMTPQDTQQTKTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGVMAVLGFVVWRFFRHRKAA*
Ga0070699_10007621733300005518Corn, Switchgrass And Miscanthus RhizosphereVTQQPESLRLPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLLGFVVWRFLGRRRPG*
Ga0070699_10037434113300005518Corn, Switchgrass And Miscanthus RhizosphereMTLQDTQQTKTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMAVLGFVVWRFFRGRKAANK*
Ga0070699_10097241913300005518Corn, Switchgrass And Miscanthus RhizosphereMTTSETPTVKMPRIVRFAIWLTFFNTWVLFEETVVDRYGLWEFMPYYRVGRLCSWDIGAMVLIGYLVWWFFRGRKAS*
Ga0070686_10083975923300005544Switchgrass RhizosphereMATHETPAKTPRIVRFAVWLTFFNTWVLFEETVVDRYGLWQYMPYYRVGKLCSWDIGVMVLLGYLVWWFFRGRKAD*
Ga0066905_10044363423300005713Tropical Forest SoilMTSHEAAAIKTTRVLQFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLLGYIVWRTFRRATPA*
Ga0068860_10029179233300005843Switchgrass RhizosphereMPTPEPQAMKAPPIVRFAIWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMALLGFTVWWFFRGRNPA*
Ga0075428_10005466383300006844Populus RhizosphereTTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFRRR*
Ga0075428_10039379033300006844Populus RhizosphereMPPQAHESMKMPGIVRFAVWLTFFNTWVLFGETVVDRYGLWEYMPYYRVGKLCSWAIGAMVLLGFVVWRFFRGSKGATSPPPSRIAE*
Ga0075421_10212631723300006845Populus RhizosphereMTAQDAPSTTTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLLGFIVWRVFRRR*
Ga0075430_10143169423300006846Populus RhizosphereMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRFCSWDIGAMVLLGFIVWRVFRRR*
Ga0075433_1007210823300006852Populus RhizosphereMPSLESAKTPRMIRFAVWLTFLNTWVLFEETVVDRYGLWQYMPLYRVARFCSWDAGAIVVLGLIVWRFLGPVKTA*
Ga0075433_1008374523300006852Populus RhizosphereMLPHQFDPAKVPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMILLGFVVWRFVRPRKAV*
Ga0075433_1189897323300006852Populus RhizosphereMATHETPAPKTPRIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMALLGFLVWWFFRGRKGPRHLNG*
Ga0075420_10029669133300006853Populus RhizosphereMTAQDAPSTTTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFWRR*
Ga0075434_10015498423300006871Populus RhizosphereMPSLDSAKTPRMIRFAVWLTFLNTWVLFEETVVDRYGLWQYMPLYRVARFCSWDAGAIVVLGLIVWRFLGPVKTA*
Ga0075434_10061798813300006871Populus RhizosphereMATHETPAPKTPRIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMALL
Ga0079217_1043472213300006876Agricultural SoilMTTQEVRTSARMPGIARFAIWLTFFNTWVLFEETIIDRHGLWEYMPYYRVAELCAWDIGAMALIGFGVWWAFRGRKARVS*
Ga0079217_1069281713300006876Agricultural SoilPAIRVPGIVRFAVWLTLFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFVVWKVFRRR*
Ga0075429_10002806363300006880Populus RhizosphereMTAQDAPSTTTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFRRR*
Ga0068865_10066074913300006881Miscanthus RhizosphereMPTPEPQAMKAPPIVKFAIWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMALVGFTVWWFFRGRNPA*
Ga0079218_1003960943300007004Agricultural SoilMTAQDAPSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLLGFIVWRMFRRR*
Ga0079218_1008572543300007004Agricultural SoilMTVQDTSPARAPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFLVWRIFRRR*
Ga0079218_1012702733300007004Agricultural SoilMTQQSAPTKTPGIVVFAVWLTFFNTWVLFEETVIDRYGLWEYLPYYRVGKLCAWDIGGAVLIAFVVWRVVRRIATRSG*
Ga0079218_1032849823300007004Agricultural SoilMVRFAVWLTFFNTWVLFEETVIDRYGLWEYMPYYRVGRLCSWDIGAMALLGFLVWRVFRRR*
Ga0079218_1208274923300007004Agricultural SoilMTAQDTSTARAPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFRRR*
Ga0099791_1050225713300007255Vadose Zone SoilMVPQELPTMKTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWKYMPYYRVGKLCSWDIGAMALLGFMVWRLLRGRKAA*
Ga0066710_10003659793300009012Grasslands SoilMAPQELPTMKTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWKYMPYYRVGKLCSWDIGAMALLGFIVWRLLRGRKVA
Ga0066710_10028853633300009012Grasslands SoilMTPQETEAKRTPGIVRFAVWLTFLDTWVLFEETVVDRYGLWQYMPYYRVAKFCLWDIGAMALLGFLVWRFFPRRRGA
Ga0099827_1069392823300009090Vadose Zone SoilMPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMALLGFIVWRFVRRRKAG*
Ga0111539_10005065163300009094Populus RhizosphereMIVRFAVWLTFFNTWVLFEETVVDRYGLREYMPYYQVGRLCSWDIGAMVLLGFVVWRAFRRITTSRVAA*
Ga0111539_1212605413300009094Populus RhizosphereMAQGDPRSAPIPGIIRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLIGWLVWRMLGRHRRRVDLA*
Ga0105245_1255423123300009098Miscanthus RhizosphereMPTPEPQAMKAPPIVRFAIWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMALVGFTVWWFFRGRNPA*
Ga0066709_10446766113300009137Grasslands SoilMKMPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAVALLGFVVWRSVRRPK*
Ga0114129_10000108623300009147Populus RhizosphereMKMPGIVRFAVWLTFFNTWVLFGETVVDRYGLWEYMPYYRVGKLCSWAIGAMVLLGFVVWRFFRGSKGATSPPPSRIAE*
Ga0114129_1011240343300009147Populus RhizosphereMPTPKAENKTPRIVKLSIWLTFLNTWVLFEETVVDRHGLWEYMPYYRVGQLCSWDIGAMALLGFIVWWVFRGRKAA*
Ga0114129_1017393033300009147Populus RhizosphereMAGTDERATPRIVRFGVWLTLMNSWVLFEEIVVDRKGLWKYMPYYRVAQFCPWDMAAMVFTAWVVWRAFRP*
Ga0114129_1035900343300009147Populus RhizosphereMTTPDMLSARTPGIVRFAIWLTFFNTCVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFRRHSRRSP*
Ga0114129_1068473613300009147Populus RhizosphereMATHETPAPKTPRIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMALLGFLVWW
Ga0105243_1068833023300009148Miscanthus RhizosphereMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGVVVWRFLRPRVRRT*
Ga0111538_1000112563300009156Populus RhizosphereMIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLLGFVVWRAFRRITTSRVAA*
Ga0111538_1138184923300009156Populus RhizosphereMQTPRIVQFAIWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGYIVWAAFRRRPRQ*
Ga0075423_1001933613300009162Populus RhizosphereMLPHQFDPAKVPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGNLCSWDIGAMIFLGFVVWRFVRPRKAV*
Ga0075423_1171336413300009162Populus RhizosphereIVRFAIWLTFFNTLVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFRRHSRRSP*
Ga0105249_1335775613300009553Switchgrass RhizosphereMQRPPIVQFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGYIVWSAFHRTRDVEH
Ga0105249_1357661423300009553Switchgrass RhizosphereQDAQSAMTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLLGFIVWRVFRRR*
Ga0126307_1015554733300009789Serpentine SoilMQTQPITMPGIIRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRPCSWDIGAMVLLGVVVCRFLRSRVKRT*
Ga0126305_1002341823300010036Serpentine SoilMQTQPITMPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLLGVVVCRFLRSRVKRT*
Ga0126382_1218524723300010047Tropical Forest SoilMTRFAVWLTFFNTWVLFEETVVDLYGLWEYMPYYRVGRLCSWDIGAMALLGFVVWRVFRRR*
Ga0126376_1000209873300010359Tropical Forest SoilMATPDTPAPRTPRIVRFAVWLTFFNTWVLFEETVVDRYGLWQYMPYYRVAKLCSWDIGAMALLGFLVWWFFRGRKRPRHLNS*
Ga0134127_1356790923300010399Terrestrial SoilSVAVWLTFFNTWVLFEETVVDRYGLWQYLPYYRVGRLCAWDIGAMIVLGVLVWSAFRRVRRAVG*
Ga0134122_1063982223300010400Terrestrial SoilMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLLGFVVWRFYRPKK*
Ga0134122_1189234623300010400Terrestrial SoilMTTNETPATKTPRIVRFAVWLTFFNTWVLFEETVVDRFGLWEYMPYYRVGKLCSWDIGAMALLGFLVWWFFRGRKSRTSGSDAAP*
Ga0137455_102576113300011429SoilMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALIGFVVWRVFRKTSFQ
Ga0137464_107631013300011434SoilMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALIGFVVWRVFRKTSFQAM*
Ga0137433_111360513300011440SoilMETAAKTLGIVRFAIWLTFFNTWVLFEETVIDRYNLWEYMPYYRVGKLCSWDIGAMALIGFFVWWIFRGRKASSGASTESISG
Ga0137375_1145583313300012360Vadose Zone SoilMKLPGIVKFAVWLTLLNTWALFEETVVDRYGLWQYMPYYRVAKFCAWDFAAMVLLGFIVWRFLGGRKAV*
Ga0137395_10000573163300012917Vadose Zone SoilMTPQQPQSTVLPGILRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMAVLGFVVWRLFRPRRGDASASEERS*
Ga0163162_1165935223300013306Switchgrass RhizosphereMPTPEPQAMKAPPIVKFAIWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMALLGFTVWWFFRGRNAA*
Ga0163162_1283499413300013306Switchgrass RhizosphereMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVDRLCSWDIGAIALLGVVVWRF
Ga0157380_1132747123300014326Switchgrass RhizosphereMATPTAVPAAPRIVKFAIWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWWFFRGRKTA
Ga0180093_108099423300015258SoilMEGVMEQGEPRSAQIPRIIRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLIGWLVWRMLGRHRRRVDLA*
Ga0134085_1034472013300015359Grasslands SoilETEAKRTPGIVRFAVWLTFINTWVLFEETVVDRYGLWQYMPYYRVAKFCLWDIGAMALLGFLVWRFFPRRRGA*
Ga0132255_10456411113300015374Arabidopsis RhizosphereMQTPRIVQFAIWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGYIVWGAFRRGPRQ*
Ga0184628_1009985733300018083Groundwater SedimentMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALIGFVVWRVFRKTSFQAM
Ga0190274_1018880223300018476SoilMAQSGPRPVRLPGIIRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLIGWLVWRMLGSHRRRVDLA
Ga0190271_1003529143300018481SoilMAQGEPRAAQIPGIIRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLIGWLVWRMLGRHRRPVDLT
Ga0187894_10000810123300019360Microbial Mat On RocksMPDRLARFAVWLTFFNTWVLFEETIIDRHGLWEYLPYYRVGRLCAWDIGAMILLALALRWAYRRARLEAQA
Ga0210382_1031808923300021080Groundwater SedimentMMPQDTQGKKTPSIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMAVLGFVVWRFFRLRKAANDPR
Ga0210380_1005205333300021082Groundwater SedimentMAQVEPRSAQIPGIIRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLIGWLVWRMLGRHRRPVDLA
(restricted) Ga0233424_1004155753300023208FreshwaterMADTLTRFAVWLTFFNTWVLFEETIIDRYGLWEYLPYYRVARLCAWDIGATILLALFVRWAYRKARPAPA
Ga0209109_1001367543300025160SoilMPEQEPTPVKAPRIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLLGFVVWWLFRGRKASAAQTT
Ga0207682_1030164123300025893Miscanthus RhizosphereMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFRKTSFQAM
Ga0207643_1024166423300025908Miscanthus RhizosphereMTTPDMLSARTPGIVRFAIWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFRRHSRRSP
Ga0207660_1024092833300025917Corn RhizosphereMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLLGFIVWRVFRRR
Ga0207646_1001427733300025922Corn, Switchgrass And Miscanthus RhizosphereMAAPTPLPGRTPRIVRIAVWLTFLNTWVLFEEIVVDRSGLWKYMPLYRVGRFCPWDVGAIVVISFIVWWSFRERKAA
Ga0207646_1115534623300025922Corn, Switchgrass And Miscanthus RhizosphereMTTPDMLSARTPGIVRFAIWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMAVLGFVVWRFFRGRKAA
Ga0207681_1033825013300025923Switchgrass RhizosphereSMTTPDMLSARTPGIVRFAIWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFRRHSRRSP
Ga0207701_1041000523300025930Corn, Switchgrass And Miscanthus RhizosphereMLPQPPQSSTLPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCAWDIGAMALLGFVVWRLLRRRKAA
Ga0207706_1068465423300025933Corn RhizosphereVSLNCFWMSRRFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFRKTSFQAM
Ga0207648_1022495913300026089Miscanthus RhizosphereMTAQDAHSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLLGFIVWRVFRRR
Ga0209470_119117713300026324SoilMTPQETEAKRTPGIVRFAVWLTFLNTWVLFEETVVDRYGLWQYMPYYRVAKFCLWDIGAMALLGFLVWRFFPRRRGA
Ga0209481_1036119113300027880Populus RhizosphereMTAQDAPSTTTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIE
Ga0209486_1002326733300027886Agricultural SoilMTVQDTSPARAPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFLVWRIFRRR
Ga0209486_1039032623300027886Agricultural SoilMTQQSAPTKTPGIVVFAVWLTFFNTWVLFEETVIDRYGLWEYLPYYRVGKLCAWDIGGAVLIAFVVWRVVRRIAKRSG
Ga0209486_1059059213300027886Agricultural SoilCMTAQDAPSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLLGFIVWRMFRRR
Ga0207428_1001042563300027907Populus RhizosphereMIVRFAVWLTFFNTWVLFEETVVDRYGLREYMPYYQVGRLCSWDIGAMVLLGFVVWRAFRRITTSRVAA
Ga0207428_1011295133300027907Populus RhizosphereMTAQDAPSTTTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFRRR
Ga0268264_1008292043300028381Switchgrass RhizosphereMPTPEPQAMKAPPIVRFAIWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMALLGFTVWWFFRGRNPA
Ga0247820_1090385813300028597SoilVSDPTPTPVGGRTQVMEGVMAQVEPRSAQIPGIIRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLIGWLVWRMLGRHRRRVDLA
Ga0307497_1012992823300031226SoilMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVLRRR
Ga0310888_1001696643300031538SoilMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLLFIVWRVFRKTSFQAM
Ga0310888_1108061123300031538SoilMAQGDPRSAQIPGIIRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLIGWLVWRMLGRHRRR
Ga0310887_1114626323300031547SoilMAQGEPRSAQIPGIIRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLIGWLVWRMLGRHRR
Ga0310886_1002561153300031562SoilMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFRRR
Ga0310886_1034662523300031562SoilMLPQPPQSSTLPVVDRYGLWEYMPYYRVGKLCSWDIGVMALLGFVVWRLLRRRKAA
Ga0310886_1058311923300031562SoilAQGEPRSAQIPGIIRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLIGWLVWRMLGRHRRRVDLA
Ga0307468_10099902323300031740Hardwood Forest SoilMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLLGFVVWRFYQAKK
Ga0307468_10105492723300031740Hardwood Forest SoilMTLQPPQSAKTPGLVQFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMALLGFAVWRFFRRRKDT
Ga0310907_1003814733300031847SoilMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLLLFIVWRVFRKTSFQAM
Ga0310904_1081205013300031854SoilPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWLVFRKTSFQAM
Ga0310893_1002150823300031892SoilMTTPDMLSARTPGIVRFAIWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLLLFIVWRVFRKTSFQAM
Ga0310893_1009989223300031892SoilMAQGEPRSAQIPGIIRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLIGWLVWRMLGRHRRRIDLA
Ga0310900_1020170623300031908SoilMATPDAAPRTPRIVKFAIWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWWFFRGRKMD
Ga0310900_1047120413300031908SoilMSQDDARLVRLPGMVKFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLIGWLVWRMLGRHRRRVDLA
Ga0310900_1123744023300031908SoilPGCKQIMEGVMAQGEPRSAQIPGIIRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLIGWLVWRMLGRHRRRVDLA
Ga0310900_1178771123300031908SoilTMPGIVRFAVWLTFFNTWVLFEETVVDRYGIWEYMPYYRVGRLCSWDIGAMVLLGVVVWRFLRPRVTRT
Ga0310885_1003054323300031943SoilMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWLVFRKTSFQAM
Ga0310884_1035876213300031944SoilMAQGEPRSAQIPGIIRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLIGWLVWRMLGRHRRRVDLA
Ga0310897_1034328523300032003SoilMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWRVFR
Ga0310902_1088847923300032012SoilQPPQSSTLPGVVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGVMALLGFVVWRLLRRRKAA
Ga0310890_1049069123300032075SoilMATPDAAPRTPRIVKFAIWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALLGFIVWWFFRGRKVG
Ga0247829_1168521113300033550SoilQGDTRSAQIPGIIRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLIGWLVWRMLGRHRRRVDLA
Ga0247830_1015756833300033551SoilMTTPPTDTRTPRIVKFAIWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMALVGFIVWWFFRGRK
Ga0247830_1105914213300033551SoilMAQGDTRSAQIPGIIRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLIGWLVWRMLGRHRRRVDLA
Ga0364924_123395_157_4023300033811SedimentMATHEAETVKTPRIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVAKLCSWDIGAMALLGFIVWWFFRGRKAARCSG
Ga0364945_0290036_28_2733300034115SedimentMAQGDPRSAQIPGIIRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLIGWLVWRMLGRHRRRVDLA
Ga0364925_0036628_1390_16293300034147SedimentQGEPRAAQIPGIIRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGKLCSWDIGAMVLIGWLVWRMLGRHRRRVDLA
Ga0314800_076726_99_3443300034675SoilMTAQDAQSATTPGIVRFAVWLTFFNTWVLFEETVVDRYGLWEYMPYYRVGRLCSWDIGAMVLIGWLVWRMLGRHRRPVDLA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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