Metagenome Family F046547

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046547
Family Type	Metagenome
Number of Sequences	151
Average Sequence Length	53 residues
Representative Sequence	MRRLVTSIAVIALVSASAIVLGQGFKKISEILTGYEETPSAVSTTGNGTFNA
Number of Associated Samples	123
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	92.05 %
% of genes near scaffold ends (potentially truncated)	98.01 %
% of genes from short scaffolds (< 2000 bps)	96.69 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.106 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (10.596 % of family members)
Environment Ontology (ENVO)	Unclassified (42.384 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (65.563 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 40.00% β-sheet: 0.00% Coil/Unstructured: 60.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF08282	Hydrolase_3	67.55
PF13744	HTH_37	3.31
PF00160	Pro_isomerase	3.31
PF12796	Ank_2	1.32
PF13451	zf-trcl	0.66
PF00291	PALP	0.66
PF14361	RsbRD_N	0.66
PF07452	CHRD	0.66
PF13857	Ank_5	0.66
PF07217	Het-C	0.66
PF03466	LysR_substrate	0.66
PF05721	PhyH	0.66
PF08543	Phos_pyr_kin	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	67.55
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	67.55
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	67.55
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	67.55
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	67.55
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	3.31
COG0351	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	Coenzyme transport and metabolism [H]	0.66
COG0524	Sugar or nucleoside kinase, ribokinase family	Carbohydrate transport and metabolism [G]	0.66
COG2240	Pyridoxal/pyridoxine/pyridoxamine kinase	Coenzyme transport and metabolism [H]	0.66
COG2870	ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase	Cell wall/membrane/envelope biogenesis [M]	0.66
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.77 %
Unclassified	root	N/A	15.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.77 %
Unclassified	root	N/A	15.23 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.11 %
Unclassified	root	N/A	15.23 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.66 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	68.21 %
Unclassified	root	N/A	15.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.99 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.99 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.23 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1.99 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.99 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.32 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.66 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.23 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.99 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %
Chloracidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium	0.66 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.66 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.66 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.23 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.32 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.66 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.66 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %
Chloracidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium	0.66 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.66 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.23 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.32 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	0.66 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.66 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %
Chloracidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium	0.66 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.66 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.23 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1.32 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.66 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.66 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %
Chloracidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium	0.66 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.66 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	15.23 %
Micromonospora rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora rhizosphaerae	1.32 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	0.66 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.66 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.66 %
Chloracidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium	0.66 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.66 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig521126	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	810	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105452393	All Organisms → cellular organisms → Bacteria → Acidobacteria	1059	Open in IMG/M
3300000953\|JGI11615J12901_10056772	All Organisms → cellular organisms → Bacteria → Acidobacteria	1281	Open in IMG/M
3300004114\|Ga0062593_102568338	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300004114\|Ga0062593_103480332	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300004114\|Ga0062593_103569885	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300004156\|Ga0062589_101148901	Not Available	739	Open in IMG/M
3300004156\|Ga0062589_102099756	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300004157\|Ga0062590_100897750	All Organisms → cellular organisms → Bacteria → Acidobacteria	829	Open in IMG/M
3300004157\|Ga0062590_101319134	All Organisms → cellular organisms → Bacteria → Acidobacteria	712	Open in IMG/M
3300004157\|Ga0062590_101794228	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300004479\|Ga0062595_100250809	All Organisms → cellular organisms → Bacteria → Acidobacteria	1148	Open in IMG/M
3300005093\|Ga0062594_100540227	All Organisms → cellular organisms → Bacteria → Acidobacteria	1001	Open in IMG/M
3300005295\|Ga0065707_10906738	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300005327\|Ga0070658_10852125	Not Available	792	Open in IMG/M
3300005328\|Ga0070676_11475834	Not Available	523	Open in IMG/M
3300005332\|Ga0066388_101391152	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300005336\|Ga0070680_100109676	All Organisms → cellular organisms → Bacteria	2297	Open in IMG/M
3300005337\|Ga0070682_100959150	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300005338\|Ga0068868_100067635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2843	Open in IMG/M
3300005340\|Ga0070689_100781146	All Organisms → cellular organisms → Bacteria → Acidobacteria	839	Open in IMG/M
3300005340\|Ga0070689_101581069	All Organisms → cellular organisms → Bacteria → Acidobacteria	595	Open in IMG/M
3300005341\|Ga0070691_10813476	Not Available	570	Open in IMG/M
3300005341\|Ga0070691_10821613	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300005344\|Ga0070661_100651757	All Organisms → cellular organisms → Bacteria → Acidobacteria	855	Open in IMG/M
3300005347\|Ga0070668_100858653	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300005354\|Ga0070675_100271676	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium	1488	Open in IMG/M
3300005364\|Ga0070673_101642046	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300005365\|Ga0070688_100881183	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300005406\|Ga0070703_10571598	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300005438\|Ga0070701_10533861	Not Available	767	Open in IMG/M
3300005440\|Ga0070705_101782274	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300005441\|Ga0070700_100418237	All Organisms → cellular organisms → Bacteria → Acidobacteria	1012	Open in IMG/M
3300005441\|Ga0070700_100454769	All Organisms → cellular organisms → Bacteria → Acidobacteria	975	Open in IMG/M
3300005456\|Ga0070678_100863186	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005457\|Ga0070662_100578212	All Organisms → cellular organisms → Bacteria → Acidobacteria	943	Open in IMG/M
3300005458\|Ga0070681_11447937	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300005459\|Ga0068867_101962219	Not Available	553	Open in IMG/M
3300005467\|Ga0070706_100473641	All Organisms → cellular organisms → Bacteria → Acidobacteria	1165	Open in IMG/M
3300005518\|Ga0070699_100530828	All Organisms → cellular organisms → Bacteria	1070	Open in IMG/M
3300005543\|Ga0070672_100861568	Not Available	799	Open in IMG/M
3300005543\|Ga0070672_100889868	All Organisms → cellular organisms → Bacteria → Acidobacteria	786	Open in IMG/M
3300005544\|Ga0070686_101312639	Not Available	605	Open in IMG/M
3300005549\|Ga0070704_100120747	All Organisms → cellular organisms → Bacteria	2013	Open in IMG/M
3300005549\|Ga0070704_100460492	All Organisms → cellular organisms → Bacteria → Acidobacteria	1097	Open in IMG/M
3300005549\|Ga0070704_100516232	All Organisms → cellular organisms → Bacteria → Acidobacteria	1039	Open in IMG/M
3300005564\|Ga0070664_101429030	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300005577\|Ga0068857_100432773	All Organisms → cellular organisms → Bacteria → Acidobacteria	1228	Open in IMG/M
3300005615\|Ga0070702_100875946	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300005616\|Ga0068852_102801435	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300005617\|Ga0068859_101068114	All Organisms → cellular organisms → Bacteria → Acidobacteria	887	Open in IMG/M
3300005618\|Ga0068864_102498644	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300005834\|Ga0068851_10598110	All Organisms → cellular organisms → Bacteria → Acidobacteria	671	Open in IMG/M
3300005841\|Ga0068863_102049805	Not Available	582	Open in IMG/M
3300005841\|Ga0068863_102508144	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300005842\|Ga0068858_100645266	All Organisms → cellular organisms → Bacteria → Acidobacteria	1028	Open in IMG/M
3300006173\|Ga0070716_101839713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora rhizosphaerae	502	Open in IMG/M
3300006237\|Ga0097621_101049840	Not Available	763	Open in IMG/M
3300006847\|Ga0075431_100194975	All Organisms → cellular organisms → Bacteria → Proteobacteria	2074	Open in IMG/M
3300006852\|Ga0075433_10238162	All Organisms → cellular organisms → Bacteria → Acidobacteria	1616	Open in IMG/M
3300006871\|Ga0075434_101207133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora rhizosphaerae	768	Open in IMG/M
3300006880\|Ga0075429_101109150	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300006914\|Ga0075436_100287747	All Organisms → cellular organisms → Bacteria → Acidobacteria	1176	Open in IMG/M
3300006954\|Ga0079219_10518776	Not Available	841	Open in IMG/M
3300009093\|Ga0105240_11431154	All Organisms → cellular organisms → Bacteria → Acidobacteria	726	Open in IMG/M
3300009098\|Ga0105245_12251217	Not Available	599	Open in IMG/M
3300009101\|Ga0105247_10544356	All Organisms → cellular organisms → Bacteria → Acidobacteria	852	Open in IMG/M
3300009147\|Ga0114129_10590159	All Organisms → cellular organisms → Bacteria → Acidobacteria	1441	Open in IMG/M
3300009147\|Ga0114129_12028119	All Organisms → cellular organisms → Bacteria → Acidobacteria	695	Open in IMG/M
3300009156\|Ga0111538_12460052	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300009162\|Ga0075423_10730051	All Organisms → cellular organisms → Bacteria → Acidobacteria	1046	Open in IMG/M
3300009174\|Ga0105241_11145606	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300009545\|Ga0105237_11870262	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300010036\|Ga0126305_10988886	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300010041\|Ga0126312_10887626	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300010042\|Ga0126314_10716803	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300010044\|Ga0126310_11367406	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300010046\|Ga0126384_10446099	Not Available	1104	Open in IMG/M
3300010047\|Ga0126382_11814969	Not Available	574	Open in IMG/M
3300010359\|Ga0126376_10046475	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3046	Open in IMG/M
3300010360\|Ga0126372_12694969	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300010362\|Ga0126377_13274938	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300010373\|Ga0134128_11396740	All Organisms → cellular organisms → Bacteria → Acidobacteria	771	Open in IMG/M
3300010397\|Ga0134124_11159157	All Organisms → cellular organisms → Bacteria → Acidobacteria	791	Open in IMG/M
3300010400\|Ga0134122_10845343	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300010400\|Ga0134122_11239637	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300010400\|Ga0134122_13038855	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300010401\|Ga0134121_11549994	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300010401\|Ga0134121_11999948	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300010403\|Ga0134123_11267092	All Organisms → cellular organisms → Bacteria → Acidobacteria	771	Open in IMG/M
3300011119\|Ga0105246_11549825	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300011119\|Ga0105246_11550444	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300012955\|Ga0164298_10917974	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300012971\|Ga0126369_11728342	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300013104\|Ga0157370_10224374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1740	Open in IMG/M
3300013297\|Ga0157378_10403194	All Organisms → cellular organisms → Bacteria → Acidobacteria	1348	Open in IMG/M
3300013297\|Ga0157378_12915596	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300013306\|Ga0163162_13158593	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300013307\|Ga0157372_11740105	All Organisms → cellular organisms → Bacteria → Acidobacteria	717	Open in IMG/M
3300013308\|Ga0157375_11775630	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300014326\|Ga0157380_11183929	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300014326\|Ga0157380_12715088	All Organisms → cellular organisms → Bacteria → Acidobacteria	562	Open in IMG/M
3300014487\|Ga0182000_10645100	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300014968\|Ga0157379_10555492	All Organisms → cellular organisms → Bacteria → Acidobacteria	1069	Open in IMG/M
3300015371\|Ga0132258_12104429	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300015372\|Ga0132256_101132365	All Organisms → cellular organisms → Bacteria → Acidobacteria	897	Open in IMG/M
3300015373\|Ga0132257_103913483	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300015374\|Ga0132255_101132003	Not Available	1177	Open in IMG/M
3300015374\|Ga0132255_105785373	Not Available	523	Open in IMG/M
3300018476\|Ga0190274_13354140	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300018481\|Ga0190271_12845140	Not Available	581	Open in IMG/M
3300022534\|Ga0224452_1182659	Not Available	645	Open in IMG/M
3300025885\|Ga0207653_10377282	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300025908\|Ga0207643_10938467	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300025911\|Ga0207654_10418451	All Organisms → cellular organisms → Bacteria → Acidobacteria	935	Open in IMG/M
3300025911\|Ga0207654_10509200	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300025927\|Ga0207687_10735024	All Organisms → cellular organisms → Bacteria → Acidobacteria	839	Open in IMG/M
3300025930\|Ga0207701_10161823	All Organisms → cellular organisms → Bacteria	1980	Open in IMG/M
3300025930\|Ga0207701_11022583	Not Available	688	Open in IMG/M
3300025930\|Ga0207701_11403810	Not Available	569	Open in IMG/M
3300025933\|Ga0207706_11482017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	554	Open in IMG/M
3300025935\|Ga0207709_10904124	All Organisms → cellular organisms → Bacteria → Acidobacteria	718	Open in IMG/M
3300025940\|Ga0207691_10571747	All Organisms → cellular organisms → Bacteria → Acidobacteria	958	Open in IMG/M
3300025942\|Ga0207689_10597178	All Organisms → cellular organisms → Bacteria → Acidobacteria	928	Open in IMG/M
3300025942\|Ga0207689_10722204	All Organisms → cellular organisms → Bacteria → Acidobacteria	840	Open in IMG/M
3300025945\|Ga0207679_10403515	All Organisms → cellular organisms → Bacteria → Acidobacteria	1203	Open in IMG/M
3300025960\|Ga0207651_10201987	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	1594	Open in IMG/M
3300025960\|Ga0207651_11235207	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300025961\|Ga0207712_11859610	All Organisms → cellular organisms → Archaea	539	Open in IMG/M
3300026041\|Ga0207639_10401606	All Organisms → cellular organisms → Bacteria → Acidobacteria	1235	Open in IMG/M
3300026075\|Ga0207708_10946164	Not Available	747	Open in IMG/M
3300026088\|Ga0207641_10328854	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300026095\|Ga0207676_11091602	All Organisms → cellular organisms → Bacteria → Acidobacteria	789	Open in IMG/M
3300026116\|Ga0207674_10939901	All Organisms → cellular organisms → Bacteria → Acidobacteria	833	Open in IMG/M
3300026116\|Ga0207674_11372422	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300027761\|Ga0209462_10100650	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300031548\|Ga0307408_100133194	All Organisms → cellular organisms → Bacteria	1941	Open in IMG/M
3300031562\|Ga0310886_10331492	All Organisms → cellular organisms → Bacteria → Acidobacteria	879	Open in IMG/M
3300031562\|Ga0310886_10605693	Not Available	673	Open in IMG/M
3300031892\|Ga0310893_10249745	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300031901\|Ga0307406_10277891	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300031908\|Ga0310900_10250425	All Organisms → cellular organisms → Bacteria → Acidobacteria	1275	Open in IMG/M
3300031943\|Ga0310885_10078961	All Organisms → cellular organisms → Bacteria → Acidobacteria	1446	Open in IMG/M
3300031944\|Ga0310884_11000213	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300031995\|Ga0307409_101037240	All Organisms → cellular organisms → Bacteria → Acidobacteria	839	Open in IMG/M
3300032003\|Ga0310897_10622835	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300032004\|Ga0307414_10383515	Not Available	1216	Open in IMG/M
3300032012\|Ga0310902_10683764	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300032013\|Ga0310906_10130679	All Organisms → cellular organisms → Bacteria → Acidobacteria	1433	Open in IMG/M
3300032013\|Ga0310906_10806883	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300032211\|Ga0310896_10443655	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	50.33%
Host-Associated	Host-Associated	49.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.67%
Plants	Host-Associated → Plants	49.67%
Aquatic	Environmental → Aquatic	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	32.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.89%
Sediment	Environmental → Aquatic → Sediment	0.66%
Roots	Host-Associated → Plants → Roots	0.66%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.85%
Loam	Environmental → Terrestrial → Soil → Loam	15.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.58%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.66%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.66%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.66%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.28%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.66%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.66%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.30%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.64%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.31%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.99%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.32%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.32%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.66%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.66%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027761	Agave microbial communities from Guanajuato, Mexico - As.Sf.rz (SPAdes)	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_00279250	2124908045	Soil	MRRTVLCIAAIAVAAASSVVFAQGGFKRISEFLTGYEETPSAVSTTGNG
INPhiseqgaiiFebDRAFT_1054523932	3300000364	Soil	MRRLGVSIAVIALVSASTVALAQGFKKISEFLTGYEETPSAVS
JGI11615J12901_100567722	3300000953	Soil	MRRRLLISLAAFALLSISTLVLAQGGFKRISEILTGYEETAPTGGGAVSTTGNGTFTARISNDESQIEWQLT
Ga0062593_1025683382	3300004114	Soil	MRPPLSYKRNLEVKGMRRLVVSIAVIALVSVSAIVLGQGFKKISEILTGYEETAATGGGAVSTTGNGTFTARISND
Ga0062593_1034803322	3300004114	Soil	MRRLGVSIAVIALVSAATVVLAQGGFKKISEILSGYEETG
Ga0062593_1035698851	3300004114	Soil	MRRLVVSIAVITAVSLSAIALGQGFKKISEILSGYEETATTGGGAVSTTGNGTFTARISN
Ga0062589_1011489011	3300004156	Soil	MRRLGIALAAIVLVAASTFALAQEGFKQISEFLTGYQETPSAVSTSGNGTFTARISNDESRIDW
Ga0062589_1020997561	3300004156	Soil	MRRLVVSIAVITAVSLSAIALGQGFKKISEILSGYEETATTGGGAVSTTGNGTFTARISNDESRIDWELSY
Ga0062590_1008977502	3300004157	Soil	MRRLGVSIAILALATAATVVFAQGGFKKISEVLTGYEETANPGPGGAVSTTGNGTFTARISNDESEIQWELS
Ga0062590_1013191342	3300004157	Soil	MRRLGVSIAIVAVVSAVSVVLAQGGFKRISEALTGYQETAAPGSAGGAVST
Ga0062590_1017942282	3300004157	Soil	MRRLVVSIAVITAVSLSAIALGQGFKKISEILSGYEETATTGGGAVSTTGNGTFTARISNDESRIDWEL
Ga0062595_1002508091	3300004479	Soil	MRRLGVSIAVIALVSATAVVLAQGGFKKISEILTGYEETAAPGNAGGAVSTTGN
Ga0062594_1005402272	3300005093	Soil	MRRALVSVAVIALVAVTSIVLAQGGFKKISEILSGYEETATSGGGAVSTTGNGTFNARISNDESRIEWELS
Ga0065707_109067382	3300005295	Switchgrass Rhizosphere	MRRLVVSIAVITAVSVAAIALGQGFKKISEILTGYEETAATGGGAVSTTG
Ga0070658_108521251	3300005327	Corn Rhizosphere	MRRLVTPIALIAAVSASAIVLGQGFKNISEFMTGYEETPSAVSTTGIGTFSARISNDE
Ga0070676_114758342	3300005328	Miscanthus Rhizosphere	MRRLVTSIAVIALVSASAIVVGQGFKNVSEMLTGYQETPSAVSTTGVGAFAAR
Ga0066388_1013911524	3300005332	Tropical Forest Soil	MRRLGTAITVIALALAPTVVLGQGGFKKISENLSGYEETPAPVSTTGNGTFTAQISNDESQIDW
Ga0070680_1001096764	3300005336	Corn Rhizosphere	MRRVALSIAVLALAAVATIVWAQGGFKRISEDLTGYEETGTTGGAVS
Ga0070682_1009591501	3300005337	Corn Rhizosphere	MRRLVLSLAVIAVVSAATIIFAQGGFKKISEFLTGYEETGTTGGAVSTTGHGTFTARISN
Ga0068868_1000676351	3300005338	Miscanthus Rhizosphere	MRRLVTSIAVIALVSASAIVVGQGFKNVSEMLTGYQETPSAVSTTGVGAFAARISNDESRIDWELTY
Ga0070689_1007811462	3300005340	Switchgrass Rhizosphere	MRRLGLSLAVIALVSVSTIAFAQGFKKISESLTGYEETPSAVSTTGNGTFN
Ga0070689_1015810691	3300005340	Switchgrass Rhizosphere	MRRLGMSLAVIASVSICSIALAQGFKRISESLTGYEETGSAVSTTGNGTFKA
Ga0070691_108134762	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MQRLGKLIAVIAIVSVSTIALAQGFKKISEFLTGYEETPSAVST
Ga0070691_108216132	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLGLSLAVIALVSVCSIAFAQGFKKISEILSGYEETPSAVSTTGNGTFNARISNDNSRID
Ga0070661_1006517571	3300005344	Corn Rhizosphere	MRRLGLSLAVIALVSVCSIAFAQGFKKISEILSGYEETPSAVSTTGNGTF
Ga0070668_1008586531	3300005347	Switchgrass Rhizosphere	MRRLGLSLAVIALVSVCSIAFAQGFKKISEILSGYEETPSAVSTTGNGTFNARI
Ga0070675_1002716761	3300005354	Miscanthus Rhizosphere	MRRLVVSIAVIALVSATAVVLAQGGFKKISEVLTGYEETAAGGGGAVSTTGNGTFNARI
Ga0070673_1016420462	3300005364	Switchgrass Rhizosphere	MRRLVVSIAVIALVSVSAIVLGQGFKRISEILTGYEETAAPGSAGGAVSTTGNGT
Ga0070688_1008811831	3300005365	Switchgrass Rhizosphere	MRRLGLSLAVIALVSVCSLAFAQGFKKISEILSGYEETPSAVSTTGNGTFNARISNDNSH
Ga0070703_105715982	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLGMSLAVIALVSAATFVGAQGFKNISEVLTGYEETGTTGGAVSTTG
Ga0070701_105338611	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLVTSIAVIALVSASAIVLGQGFKKISEILTGYEETPSAV
Ga0070705_1017822741	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLVTSIAVIALVSATAVVLAQGGFKKISEILTGYEETA
Ga0070700_1004182371	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLLVSIAVISLGSLTTIAVTQGGFKRISEILTGYEETPSAV
Ga0070700_1004547691	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLGMSLAVVALVSLCSLAFAQGFKRISEILSGYEETPSAVSTTGNGTFKARISNDNS
Ga0070678_1008631862	3300005456	Miscanthus Rhizosphere	MRRVALSIAVLALAAVATIVWAQGGFKRISEDLTGYEETGTTGGAVSTTGN
Ga0070662_1005782122	3300005457	Corn Rhizosphere	MRKLGKLIAVIAIVSVSTIALAQGFKKISEFLNGYEETPSAVSTTGNGTFNARI
Ga0070681_114479371	3300005458	Corn Rhizosphere	MRRLGVSVAVVTLVALLSASIVLAQGGFKKISEFLTGYEETPAAISTTGNGTFNARIS
Ga0068867_1019622191	3300005459	Miscanthus Rhizosphere	MRRLVAVVAAIAFVSVSTIVFAQGFKRISELLTGYEETPSAVS
Ga0070706_1004736412	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLLVSIAVIALVSVSAVALGQGFKRISEILTGYEETPAAISTT
Ga0070699_1005308281	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRRVALSIAVLALAAVATIVWAQGGFKRISEDLTGYEETGTTGGAVST
Ga0070672_1008615683	3300005543	Miscanthus Rhizosphere	MRRLVTPIALIAAVSASAIVLGQGFKNISEFMTGYEETPSAVSTTGIGTFSARISNDESRIDWE
Ga0070672_1008898681	3300005543	Miscanthus Rhizosphere	MRKAALSIAVVALVAAATIVWAQGGFKRISEDLTGYEETGTTGGAVSTTGNGTFNARISNDNSRIEWELSYA
Ga0070686_1013126392	3300005544	Switchgrass Rhizosphere	MRRLVTSIAVIALVSASAIVLGQGFKKISEILTGYEETPSAVSTTGNGTFNA
Ga0070704_1001207474	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLVLSLAVIALVSAATIILGQGGFKNISEFLTGYEETAAGGGGAVSTTGTGTFTARISNDNSRIDWELSYADLEGA
Ga0070704_1004604922	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRAPSKQLRNLEEKGMRRLGVSVAILALVSAATVVLAQGGFKKISEILTGYEETAAPGSAGGAVSTTGNGTFTARISNDETEIQWELSYADLEG
Ga0070704_1005162321	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRKAALSIAVVALVAAATIVWAQGGFKRISEDLTGYEETAAGGGGAVSTTGN
Ga0070664_1014290301	3300005564	Corn Rhizosphere	MRKAALSIAVVALVAAATIVWAQGGFKRISEDLTGYEETAAGGGGAVSTTGNGTF
Ga0068857_1004327731	3300005577	Corn Rhizosphere	MRKLGKLIAVIAIVSVSTIALAQGFKKISEFLNGYEETPSAVSTTGNGTFNARISNDNS
Ga0070702_1008759461	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRSLGKLLAVIAIVSVSTIALAQGFKKISEFLTGYEETPSAVSTTGNGT
Ga0068852_1028014351	3300005616	Corn Rhizosphere	MRRLVVSIAVIALVSATAVVLAQGGFKKISEVLTGYEETAAGGGGAV
Ga0068859_1010681142	3300005617	Switchgrass Rhizosphere	MRRLVVSIAVIALVSVSAIVLGQGFKKISEILTGYEETAAPGSAGGAVSTTGNG
Ga0068864_1024986441	3300005618	Switchgrass Rhizosphere	MRRLGKSLAVIALVSICSIAFAQGFKKISEVLSGYEETPSAVSTTGNGTFHARISNDN
Ga0068851_105981101	3300005834	Corn Rhizosphere	MRRLLVSIAVIALVSATAVVLAQGGFKKISEVLTGYEETA
Ga0068863_1020498052	3300005841	Switchgrass Rhizosphere	MRRLGTSIAVIALASATTAAFAQGGFKAISEALTGYEETPSAVSTTG
Ga0068863_1025081441	3300005841	Switchgrass Rhizosphere	MRRLGMSLAVIASVSICSIALAQGFKRISESLTGY
Ga0068858_1006452662	3300005842	Switchgrass Rhizosphere	MRRLLVSIAVITAVSLSAIALGQGFKKISEILSGYEETATTGGGAVSTTGNGT
Ga0070716_1018397131	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRRRVLISLAALAVLSISAIVLAQGGFKKISEVLTGYEETASAVSTTGSGTFTARISNDESRIDWQLTYS
Ga0097621_1010498401	3300006237	Miscanthus Rhizosphere	MRRLVTSIAVIALVSASAIVVGQGFKNVSEMLTGYQETPSAVSTTGVGAFAARISNDES
Ga0075431_1001949751	3300006847	Populus Rhizosphere	MRRLLVSIAVIALVSATAVVLAQGGFKRISEILTGYEETAATG
Ga0075433_102381623	3300006852	Populus Rhizosphere	MRRLGVSIAVIALVSASTVALAQGFKKISEILTGYEETPSAVS
Ga0075434_1012071331	3300006871	Populus Rhizosphere	MRRLGTSIAVIALASATTVAFAQGGFKAISEALTGYEETPSAVSSTGNGTFTARISNDESRIDWNLSYADLE
Ga0075429_1011091502	3300006880	Populus Rhizosphere	MRRLVLSLAVIALVSATTIILGQGGFKRISEILTGYEETAASGGGAVSTTGNGTFTARIS
Ga0075436_1002877471	3300006914	Populus Rhizosphere	MRRLGMSLAFIALVSASTIALAQGFKKISEFLTGY
Ga0079219_105187761	3300006954	Agricultural Soil	MRKLGVSIAAIALVSAATIALGQGFKKISELLTGYEETPSAVS
Ga0105240_114311541	3300009093	Corn Rhizosphere	VSIAVITAVSVAAIALGQGFKKISEILTGYEETAPTGGGAVSTTGNGTFTARISNDE
Ga0105245_122512171	3300009098	Miscanthus Rhizosphere	MRRLGLSFAVIALVSATAIVLAQGGFKKISESLTGYEETDSAVSTTGNGTFNAR
Ga0105247_105443562	3300009101	Switchgrass Rhizosphere	VSIAVIALVSVSAIVLGQGFKKISEILTGYEETAAPGSAGGAVSTTGNGTFTA
Ga0114129_105901593	3300009147	Populus Rhizosphere	MSAAALVVLSISTLVLAQGGFKKISEFLTGYQETPSAVSTTASGTFTARISNDESRIDWELSYSD
Ga0114129_120281192	3300009147	Populus Rhizosphere	MRRLALSIGVIAVLSASTIVLAQGGFKKIREFLTGYEEVPALSTTG
Ga0111538_124600521	3300009156	Populus Rhizosphere	MRKAALSIAVLALAAVATIVWAQGGFKRISEDLTGYEETGTTGGAVSTT
Ga0075423_107300512	3300009162	Populus Rhizosphere	MRRLLVSVAIVAVVSIATVVLAQGGFKKISEFLTGYEETAATGGGAVSTTGNGTFKARISNDESEIQWE
Ga0105241_111456062	3300009174	Corn Rhizosphere	MRRLGLSLAVIALVSASTIAFAQGFKKISEILTGYQETPSAVSTTGNGTFNA
Ga0105237_118702622	3300009545	Corn Rhizosphere	VTSIAVIALVSATAVVLAQGGFKKISEILTGYEETAATGGGAVSTTGNGTFTARISNDESRIDWQLSYSDLE
Ga0126305_109888862	3300010036	Serpentine Soil	MSLAMIALVSVCSIAFAQGFKRISEILSGYEETPSAVSTTGNGTFTARI
Ga0126312_108876262	3300010041	Serpentine Soil	MSLAMIVLVSVCSVAFAQGFKRISEFLTGYEETPSAVSTTGNGTFT
Ga0126314_107168032	3300010042	Serpentine Soil	MRRLVVSIAVITLVSVSAIVLGQGFKKISEILTGYEETAPTG
Ga0126310_113674062	3300010044	Serpentine Soil	MSVAFVAVVSLATIALGQGFKKISEILTGYEETPSAVST
Ga0126384_104460991	3300010046	Tropical Forest Soil	VKTIFSVFALLVLVPVIAWSAGFKVITETLIGYEETPAAISTTGNGQFNARISNDESRID
Ga0126382_118149692	3300010047	Tropical Forest Soil	VSIAVIALVSVSAIALGQGFKKISEILSGYEETPAPISTTGNGSFNARISNDESRIDWE
Ga0126376_100464755	3300010359	Tropical Forest Soil	VSIAVITAISTSAVVLGQGFKRISEILTGYEETPAAISTTGNGTFTARISNDESRI
Ga0126372_126949692	3300010360	Tropical Forest Soil	MSIAVIALVSVCSIAFAQGFKKISEILSGYEETPAPISTTGNGSFN
Ga0126377_132749381	3300010362	Tropical Forest Soil	VSVAVIALVSATSIVFAQGGFKKISEFLNGYEETPAA
Ga0134128_113967402	3300010373	Terrestrial Soil	MRRLGVSIAIVALGSATSIVLAQGGFKKIAEFLTGYEET
Ga0134124_111591571	3300010397	Terrestrial Soil	VSIAVIALVSATAVVLAQGGFKKISEVLTGYEETAAGGGGAVSTTGNGTFNARISNDESHIDWELSY
Ga0134122_108453433	3300010400	Terrestrial Soil	MRRLGVSIAILALAAAATVVLAQGGFKKISEVLTGYEETANPGPGGAVSTTGNGTFTARISNDESEIQWELS*
Ga0134122_112396371	3300010400	Terrestrial Soil	MRRRVLISLLVLAVLSISAIVLAQGGFKKISEVLTGYAETTAVSTTGGGTFTARISNDESRIAWELSYSDLEGA
Ga0134122_130388552	3300010400	Terrestrial Soil	MRRLGVSIAVIALVSVSAVVFAQGFKKISETLTGYE
Ga0134121_115499942	3300010401	Terrestrial Soil	LSIAVVALVSASTVVWAQGFKKISEFLTGYEETPSAVSTTGTGTFNARIS
Ga0134121_119999482	3300010401	Terrestrial Soil	MRRLGLSLAVIALVSVSSIAFAQGFKRISEVLTGYEETPSAVSTTG
Ga0134123_112670922	3300010403	Terrestrial Soil	VIALVSAATIILGQGGFKNISEFLTGYEETAAGGGGAVSTTGTGNYTARISNANSRIDWELS
Ga0105246_115498252	3300011119	Miscanthus Rhizosphere	LEEKGMRRLVTSIAVIALVSASAIVLGQGFKKISEILTGYEETPSAVSTTGNG
Ga0105246_115504441	3300011119	Miscanthus Rhizosphere	MRRLGLSLAVIALVSASSIAFAQGFKKISEVLTGYEETPSAV
Ga0164298_109179741	3300012955	Soil	MRRRVLISLAALAVLSISAIVLAQGGFKKISEVLTGYEETASAVSTTGSGTFTARISNDESRIDWQLSYS
Ga0126369_117283422	3300012971	Tropical Forest Soil	MRRIGLVIAVVALLSASVVVLGQGFKRIKEVLTGYEETP
Ga0157370_102243743	3300013104	Corn Rhizosphere	MRRLVTSFALIAAASASAIVLGQGFKNISEFMTGYEETPSAVSTTGIG
Ga0157378_104031941	3300013297	Miscanthus Rhizosphere	MRKLGKLIAVIAIVSVSTIALAQGFKKISEFLNGYEETPSAVSTTGN
Ga0157378_129155961	3300013297	Miscanthus Rhizosphere	MIALVSATAIVLGQGFKKISEILTGYEETPSAVSTTGNGTFN
Ga0163162_131585932	3300013306	Switchgrass Rhizosphere	VSIAVIALVSVSAVVFAQGFKKISETLTGYEETASAVSTTGNGTFNARISN
Ga0157372_117401053	3300013307	Corn Rhizosphere	MRRLGVSIAILALAAAATVVLAQGGFKKISEVLTGYEE
Ga0157375_117756302	3300013308	Miscanthus Rhizosphere	VSIAVIALVSVSAIVLGQGFKKISEILTGYEETAPTGGGAVSTTGNGTFT
Ga0157380_111839292	3300014326	Switchgrass Rhizosphere	MRRVALSIAVLALAAVATIVWAQGGFKKISEDLTGYEETGTTGGAVSTTGNGTFNAR
Ga0157380_127150882	3300014326	Switchgrass Rhizosphere	VSIAVIALVSVSAIVLGQGFKKISEILTGYEETAPTGGGAVSTTGNGT
Ga0182000_106451002	3300014487	Soil	MRRLVTSIAVIALVSASAIVLGQGFKKISEILTGYEETPSAVSTTG
Ga0157379_105554921	3300014968	Switchgrass Rhizosphere	MSLAVIASVSICSIALAQGFKRISESLTGYEETGSAVSTTG
Ga0132258_121044293	3300015371	Arabidopsis Rhizosphere	LEVFGMRRLGVSLGILALAAAATVVLAQGGFKKISEALTGYEETATPGSAGGAVSTTGNGTFTARISNDE
Ga0132256_1011323651	3300015372	Arabidopsis Rhizosphere	VIALVSVCSFAYAQGFKKISEILTGYEETPSAVSTTGNGTFKA
Ga0132257_1039134831	3300015373	Arabidopsis Rhizosphere	MRRLILSIAVVAWLSASVIVLGQGFKRISEILTGYEETPSAVSTTGNGTFKATISNDG
Ga0132255_1011320032	3300015374	Arabidopsis Rhizosphere	MRRLVAVVAAIAFVSVSTIVFAQGFKRISELLTGYEET
Ga0132255_1057853732	3300015374	Arabidopsis Rhizosphere	MRRAVIGIAVIAAAAASSVVIAQGGAKKINEILTGYEETPSAVSTTGNGQLTAAVSKDGS
Ga0190274_133541402	3300018476	Soil	MRRLGMSLAIVALVSVCSIAFAQGFKKISEILNGYEETPSAVSTTGN
Ga0190271_128451401	3300018481	Soil	MRRLITSLAVIAAVSASAIAIGQGFKKISEVLTGY
Ga0224452_11826591	3300022534	Groundwater Sediment	MRKLSVIVCVALVAAAATIVLSQGFKNINEALTGYEETPQ
Ga0207653_103772822	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLGMSLAVIALVSAATFVGAQGFKNISEVLTGYEETGTTGGAVSTTGN
Ga0207643_109384671	3300025908	Miscanthus Rhizosphere	MRKAALSIAVVALVAAATIVWAQGGFKRISEDLTGYEETAAGGGGAVSTTGNGTFNARISNDNSHID
Ga0207654_104184511	3300025911	Corn Rhizosphere	MRRLGMSLAVIALVSAATFVGAQGFKNISEVLTGYEET
Ga0207654_105092001	3300025911	Corn Rhizosphere	MRRLVTSFALIAAASASAIVLGQGFKNISEFMTGYEETPSAVSTTGIGQFAARIQR
Ga0207687_107350242	3300025927	Miscanthus Rhizosphere	MRRLGMSLAVIALVSACSIAFAQGFKKISEILSGYEETPSAVSTT
Ga0207701_101618231	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLGLSLAVIALVSVCSIAFAQGFKKISEILSGYEETPSAVSTTGNGTFNARISNDN
Ga0207701_110225831	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLVTSIAVIALVSASAIVVGQGFKNVSEMLTGYQETPSAVSTTGVGAFAARISNDESRIDWELT
Ga0207701_114038102	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLGIALAAIVLVAASTFALAQEGFKQISEFLTGYQETPSAVSTSGNGTFTARISNDESRIDWELSYT
Ga0207706_114820172	3300025933	Corn Rhizosphere	MRRLGMSLAVIALVSAATFVGAQGFKNISEVLTGYEETGTTGGGPAR
Ga0207709_109041241	3300025935	Miscanthus Rhizosphere	MRRLVVSIAVIALVSVSAIVLGQGFKKISEILTGYEE
Ga0207691_105717471	3300025940	Miscanthus Rhizosphere	MRKLGKLIAVIAIVSVSTIALAQGFKKIREFLNGYEETPSA
Ga0207689_105971781	3300025942	Miscanthus Rhizosphere	MRRLLVSIAVITAVSVAAIALGQGFKKISEILTGYEETAATGGGAVSTTGNGTFT
Ga0207689_107222042	3300025942	Miscanthus Rhizosphere	MRRLGMSLAVIALVSAATFVGAQGFKNISEVLTGYEETGTTGGAVSTTGNGTFKARISN
Ga0207679_104035152	3300025945	Corn Rhizosphere	MRKAALSIAVVALVAAATIVWAQGGFKRMSEDLTGYEETAAGGGGAVSTTGNGTF
Ga0207651_102019873	3300025960	Switchgrass Rhizosphere	MRRLLVSIAVISLGSLTTIAVTQGGFKRISEILTGY
Ga0207651_112352071	3300025960	Switchgrass Rhizosphere	MRRVALSIAVLALAAVATIVWAQGGFKRISEDLTGYEETGTTGGAVSTT
Ga0207712_118596101	3300025961	Switchgrass Rhizosphere	MRRLGVSIAVIALVSAATVVLAQGGFKKISEVLSGYEETGTT
Ga0207639_104016061	3300026041	Corn Rhizosphere	MRRLVLSLAVIALVSAATIILGQGGFKNISEFLTGYEETAAGGGGAVSTTGTGTFTARISNDNSRIDWELSYADLEG
Ga0207708_109461641	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLVTSIAVIALVSASAIVVGQGFKNVSEMLTGYQETPSAVSTTGVGAFAARISNDESRIDW
Ga0207641_103288541	3300026088	Switchgrass Rhizosphere	MRRLGLSLAVIALVSASSIAFAQGFKKISEILTGYEETPSAV
Ga0207676_110916022	3300026095	Switchgrass Rhizosphere	MRRLVVSIAVIALVSATAVVLAQGGFKKISEVLTGYEETAAGGGGAVSTTGN
Ga0207674_109399011	3300026116	Corn Rhizosphere	MRRLVTSIAVITLVSASAIVLGQGFKKISEILTGYEETPSAVSTTGNGTFNAR
Ga0207674_113724222	3300026116	Corn Rhizosphere	MRRLVVSIAVIALVSASAIVLGQGFKKISEILTGYEETAASGGGAVSTTGNGTFNA
Ga0209462_101006501	3300027761	Agave	MRRAALASAVVALVSVATIVWAQGGFKRISEELTGYEETAAPGQVGGAVSTTGNGTFNARISNDNSRIDWEHSYA
Ga0307408_1001331941	3300031548	Rhizosphere	MRRLLVSIAVIALVSATAVVLAQGGFKKISEILTGYEETA
Ga0310886_103314921	3300031562	Soil	MRKLGKLIAVIAIVSVSTIALAQGFKKISEFLNGYEETPSAVSTTGNGTFNARISNDGSQ
Ga0310886_106056932	3300031562	Soil	MRRLGIALAAIVLVAASTFALAQEGFKQISEFLTGYQETPSAVST
Ga0310893_102497452	3300031892	Soil	MRRVALSIAVLALAAVATIVWAQGGFKRISEDLTGYEETGTTGGAVSTTGNGTFNARISNDNSR
Ga0307406_102778911	3300031901	Rhizosphere	MRRIVKGVAMIAAVFVSAIAVGEGFKKISEILTGYEETPSAVSTT
Ga0310900_102504252	3300031908	Soil	MRRLGVSVAVVTLVALLSASIVLAQGGFKKISEFLTGYEE
Ga0310885_100789611	3300031943	Soil	MRKLGKLIAVIAIVSVSTIALAQGFKKISEFLNGYEETPSAVSTTGNGTFNARISNDG
Ga0310884_110002132	3300031944	Soil	MRRLTTSIAVIALVSATTFVMGQGFKKISEILTGYEETPSAVSTTGN
Ga0307409_1010372401	3300031995	Rhizosphere	MRRLLVSIAVIALVSATAVVLAQGGFKKISEILTGYEETAATGGGAVSTTGNGTFTARISNDESQIEW
Ga0310897_106228351	3300032003	Soil	MRRVALSIAVLALAAVATIVWAQGGFKRISEDLTGYEETGTTGGAVSTTGNGTFNARISNDNSRIEWE
Ga0307414_103835151	3300032004	Rhizosphere	MRRLVTSVAAIAVVSASAIVLSQGFKNISEFLTGYEETPSAVSTTGNGTFSA
Ga0310902_106837641	3300032012	Soil	MRRLTTSIAVIALVSATTFVMGQGFKKISEILTGYEETPSAFSTTGNGTFNAR
Ga0310906_101306791	3300032013	Soil	MRKLGKLIAVIAIVSVSTIALAQGFKKISEFLNGYEETPSAVSTTGNGTFN
Ga0310906_108068831	3300032013	Soil	MRRLVVSIAVIALVSATAVVLAQGGFKKISEVLTGYEETAAGGGGAVSTTGNGTFNARISND
Ga0310896_104436552	3300032211	Soil	MRKLGKLIAVIAIVSVSTIALAQGFKKISEFLNGYEETPSAVSTTGNGTFNARISNDGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F046547

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences