Metagenome / Metatranscriptome Family F046525

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046525
Family Type	Metagenome / Metatranscriptome
Number of Sequences	151
Average Sequence Length	88 residues
Representative Sequence	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVIHSATTASLPTVAPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARVQRRSH
Number of Associated Samples	106
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.11 %
% of genes near scaffold ends (potentially truncated)	35.10 %
% of genes from short scaffolds (< 2000 bps)	81.46 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.225 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (35.099 % of family members)
Environment Ontology (ENVO)	Unclassified (43.046 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.993 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 20.45% β-sheet: 4.55% Coil/Unstructured: 75.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF03734	YkuD	17.22
PF00919	UPF0004	16.56
PF04055	Radical_SAM	11.26
PF03401	TctC	0.66
PF03328	HpcH_HpaI	0.66
PF13281	MAP3K_TRAF_bd	0.66
PF03741	TerC	0.66
PF00589	Phage_integrase	0.66
PF00155	Aminotran_1_2	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	17.22
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	17.22
COG0621	tRNA A37 methylthiotransferase MiaB	Translation, ribosomal structure and biogenesis [J]	16.56
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.66
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	0.66
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.66
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.66
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.23 %
All Organisms	root	All Organisms	33.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.23 %
cellular organisms	root	All Organisms → cellular organisms	33.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.23 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.79 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	1.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.54 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	1.99 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.23 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15.89 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	1.99 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.32 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.23 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.95 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	5.30 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	1.99 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.32 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.66 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.23 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.30 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	1.99 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.32 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.66 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.66 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.66 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.66 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.66 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.66 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.66 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.66 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.23 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.30 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	1.99 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.66 %
Rubellimicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Rubellimicrobium	0.66 %
Rhizobiales bacterium 65-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 65-9	0.66 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.66 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.66 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.66 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.66 %
Thiorhodospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thiorhodospira	0.66 %
Starkeya	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya	0.66 %
Dermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermatophilaceae	0.66 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.23 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.30 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	1.99 %
Rubellimicrobium thermophilum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Rubellimicrobium → Rubellimicrobium thermophilum	0.66 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.66 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.66 %
Austwickia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermatophilaceae → Austwickia	0.66 %
unclassified Starkeya	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → unclassified Starkeya	0.66 %
Salinispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora	0.66 %
Thiorhodospira sibirica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thiorhodospira → Thiorhodospira sibirica	0.66 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.66 %
Rhizobiales bacterium 65-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 65-9	0.66 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.66 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.23 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.30 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1.99 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.66 %
Rubellimicrobium thermophilum DSM 16684	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Rubellimicrobium → Rubellimicrobium thermophilum → Rubellimicrobium thermophilum DSM 16684	0.66 %
Mesorhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	0.66 %
Starkeya sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → unclassified Starkeya → Starkeya sp.	0.66 %
Salinispora tropica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora tropica	0.66 %
Rhizobium tropici	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium tropici	0.66 %
Austwickia chelonae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermatophilaceae → Austwickia → Austwickia chelonae	0.66 %
Thiorhodospira sibirica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thiorhodospira → Thiorhodospira sibirica	0.66 %
Rhizobiales bacterium 65-9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 65-9	0.66 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.66 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000580\|AF_2010_repII_A01DRAFT_1009520	Not Available	1570	Open in IMG/M
3300004633\|Ga0066395_10058659	All Organisms → cellular organisms → Bacteria → Proteobacteria	1731	Open in IMG/M
3300004633\|Ga0066395_10082209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1511	Open in IMG/M
3300004633\|Ga0066395_10216104	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300005167\|Ga0066672_10035153	All Organisms → cellular organisms → Bacteria	2777	Open in IMG/M
3300005332\|Ga0066388_102293645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	976	Open in IMG/M
3300005363\|Ga0008090_10209368	All Organisms → cellular organisms → Bacteria	1470	Open in IMG/M
3300005445\|Ga0070708_101736056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermatophilaceae → Austwickia → Austwickia chelonae	580	Open in IMG/M
3300005471\|Ga0070698_101406158	Not Available	648	Open in IMG/M
3300005518\|Ga0070699_100022595	All Organisms → cellular organisms → Bacteria → Proteobacteria	5421	Open in IMG/M
3300005549\|Ga0070704_100336935	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300005554\|Ga0066661_10094175	All Organisms → cellular organisms → Bacteria	1781	Open in IMG/M
3300005559\|Ga0066700_10061397	All Organisms → cellular organisms → Bacteria	2349	Open in IMG/M
3300005713\|Ga0066905_100644232	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300005713\|Ga0066905_101479707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium tropici	617	Open in IMG/M
3300005713\|Ga0066905_101709261	Not Available	578	Open in IMG/M
3300005764\|Ga0066903_100177956	All Organisms → cellular organisms → Bacteria	3129	Open in IMG/M
3300005764\|Ga0066903_105107976	Not Available	695	Open in IMG/M
3300005764\|Ga0066903_105445871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Salinispora → Salinispora tropica	671	Open in IMG/M
3300005764\|Ga0066903_106378750	Not Available	615	Open in IMG/M
3300005937\|Ga0081455_10291776	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300006175\|Ga0070712_100101812	All Organisms → cellular organisms → Bacteria	2126	Open in IMG/M
3300006176\|Ga0070765_102298180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thiorhodospira → Thiorhodospira sibirica	502	Open in IMG/M
3300006852\|Ga0075433_10137601	All Organisms → cellular organisms → Bacteria	2171	Open in IMG/M
3300006871\|Ga0075434_100343593	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300009143\|Ga0099792_10126430	Not Available	1380	Open in IMG/M
3300009147\|Ga0114129_12413015	Not Available	630	Open in IMG/M
3300009792\|Ga0126374_10599864	Not Available	812	Open in IMG/M
3300009792\|Ga0126374_11557121	Not Available	544	Open in IMG/M
3300009792\|Ga0126374_11637125	Not Available	533	Open in IMG/M
3300010043\|Ga0126380_10496032	Not Available	936	Open in IMG/M
3300010043\|Ga0126380_10771248	Not Available	783	Open in IMG/M
3300010043\|Ga0126380_12212062	Not Available	509	Open in IMG/M
3300010046\|Ga0126384_10099121	Not Available	2145	Open in IMG/M
3300010046\|Ga0126384_10440996	Not Available	1109	Open in IMG/M
3300010046\|Ga0126384_10757072	Not Available	866	Open in IMG/M
3300010046\|Ga0126384_10834598	Not Available	827	Open in IMG/M
3300010046\|Ga0126384_11181194	Not Available	705	Open in IMG/M
3300010046\|Ga0126384_11847996	Not Available	574	Open in IMG/M
3300010046\|Ga0126384_12290469	Not Available	521	Open in IMG/M
3300010047\|Ga0126382_10268704	Not Available	1261	Open in IMG/M
3300010047\|Ga0126382_12531529	Not Available	501	Open in IMG/M
3300010048\|Ga0126373_10684801	Not Available	1083	Open in IMG/M
3300010048\|Ga0126373_10993862	Not Available	904	Open in IMG/M
3300010358\|Ga0126370_10486108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1039	Open in IMG/M
3300010358\|Ga0126370_11749271	Not Available	600	Open in IMG/M
3300010358\|Ga0126370_12451414	Not Available	519	Open in IMG/M
3300010359\|Ga0126376_12939347	Not Available	526	Open in IMG/M
3300010360\|Ga0126372_10637960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1029	Open in IMG/M
3300010360\|Ga0126372_11685282	Not Available	675	Open in IMG/M
3300010361\|Ga0126378_11495042	Not Available	766	Open in IMG/M
3300010366\|Ga0126379_11000394	Not Available	941	Open in IMG/M
3300010366\|Ga0126379_11547558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	769	Open in IMG/M
3300010366\|Ga0126379_11676442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	740	Open in IMG/M
3300010366\|Ga0126379_13811990	Not Available	505	Open in IMG/M
3300010376\|Ga0126381_101073961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1163	Open in IMG/M
3300010398\|Ga0126383_10044371	All Organisms → cellular organisms → Bacteria	3656	Open in IMG/M
3300010398\|Ga0126383_10557638	Not Available	1212	Open in IMG/M
3300010398\|Ga0126383_11758281	Not Available	709	Open in IMG/M
3300010398\|Ga0126383_13467800	Not Available	515	Open in IMG/M
3300010863\|Ga0124850_1010447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2946	Open in IMG/M
3300012199\|Ga0137383_10021655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4455	Open in IMG/M
3300012200\|Ga0137382_10251112	Not Available	1225	Open in IMG/M
3300012201\|Ga0137365_10033531	All Organisms → cellular organisms → Bacteria	3937	Open in IMG/M
3300012201\|Ga0137365_11313614	Not Available	513	Open in IMG/M
3300012202\|Ga0137363_10128236	Not Available	1967	Open in IMG/M
3300012206\|Ga0137380_10213661	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300012210\|Ga0137378_10576593	Not Available	1034	Open in IMG/M
3300012211\|Ga0137377_10735524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	920	Open in IMG/M
3300012349\|Ga0137387_10984333	Not Available	606	Open in IMG/M
3300012354\|Ga0137366_10373555	Not Available	1041	Open in IMG/M
3300012930\|Ga0137407_10561965	Not Available	1069	Open in IMG/M
3300012948\|Ga0126375_11869013	Not Available	526	Open in IMG/M
3300012971\|Ga0126369_11767421	Not Available	707	Open in IMG/M
3300012984\|Ga0164309_10098993	Not Available	1835	Open in IMG/M
3300012989\|Ga0164305_11579959	Not Available	585	Open in IMG/M
3300016294\|Ga0182041_10743517	Not Available	873	Open in IMG/M
3300016319\|Ga0182033_10510916	Not Available	1034	Open in IMG/M
3300016319\|Ga0182033_10732910	Not Available	867	Open in IMG/M
3300016341\|Ga0182035_12200827	Not Available	500	Open in IMG/M
3300016357\|Ga0182032_10251581	Not Available	1374	Open in IMG/M
3300016357\|Ga0182032_10381513	Not Available	1135	Open in IMG/M
3300016387\|Ga0182040_10410942	Not Available	1064	Open in IMG/M
3300016445\|Ga0182038_10082442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 65-9	2276	Open in IMG/M
3300018468\|Ga0066662_11298411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	745	Open in IMG/M
3300021170\|Ga0210400_11242481	Not Available	599	Open in IMG/M
3300021560\|Ga0126371_10713183	Not Available	1151	Open in IMG/M
3300021560\|Ga0126371_10716276	Not Available	1148	Open in IMG/M
3300025922\|Ga0207646_10562955	Not Available	1024	Open in IMG/M
3300026319\|Ga0209647_1001095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	23799	Open in IMG/M
3300027576\|Ga0209003_1024590	Not Available	997	Open in IMG/M
3300027874\|Ga0209465_10029804	Not Available	2566	Open in IMG/M
3300027909\|Ga0209382_11874449	Not Available	580	Open in IMG/M
3300029636\|Ga0222749_10220254	Not Available	955	Open in IMG/M
3300031543\|Ga0318516_10001468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9076	Open in IMG/M
3300031543\|Ga0318516_10001796	All Organisms → cellular organisms → Bacteria	8535	Open in IMG/M
3300031543\|Ga0318516_10086933	Not Available	1751	Open in IMG/M
3300031544\|Ga0318534_10048096	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	2382	Open in IMG/M
3300031544\|Ga0318534_10217443	Not Available	1102	Open in IMG/M
3300031545\|Ga0318541_10095759	Not Available	1588	Open in IMG/M
3300031545\|Ga0318541_10420607	Not Available	747	Open in IMG/M
3300031546\|Ga0318538_10106715	Not Available	1451	Open in IMG/M
3300031546\|Ga0318538_10603684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300031564\|Ga0318573_10027783	Not Available	2618	Open in IMG/M
3300031572\|Ga0318515_10010519	Not Available	4116	Open in IMG/M
3300031573\|Ga0310915_10803897	Not Available	661	Open in IMG/M
3300031573\|Ga0310915_10944082	Not Available	603	Open in IMG/M
3300031640\|Ga0318555_10287286	Not Available	890	Open in IMG/M
3300031679\|Ga0318561_10067813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1822	Open in IMG/M
3300031682\|Ga0318560_10098683	Not Available	1508	Open in IMG/M
3300031713\|Ga0318496_10484764	Not Available	684	Open in IMG/M
3300031723\|Ga0318493_10084993	Not Available	1565	Open in IMG/M
3300031744\|Ga0306918_10322813	Not Available	1193	Open in IMG/M
3300031747\|Ga0318502_10434927	Not Available	782	Open in IMG/M
3300031747\|Ga0318502_10606232	Not Available	659	Open in IMG/M
3300031769\|Ga0318526_10126077	Not Available	1034	Open in IMG/M
3300031770\|Ga0318521_10676732	Not Available	626	Open in IMG/M
3300031771\|Ga0318546_10007043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5720	Open in IMG/M
3300031771\|Ga0318546_10075327	Not Available	2165	Open in IMG/M
3300031771\|Ga0318546_10769606	Not Available	677	Open in IMG/M
3300031779\|Ga0318566_10007842	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4266	Open in IMG/M
3300031779\|Ga0318566_10206136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	976	Open in IMG/M
3300031779\|Ga0318566_10265575	Not Available	850	Open in IMG/M
3300031781\|Ga0318547_10227349	Not Available	1120	Open in IMG/M
3300031792\|Ga0318529_10311313	Not Available	733	Open in IMG/M
3300031797\|Ga0318550_10037835	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	2113	Open in IMG/M
3300031798\|Ga0318523_10001576	All Organisms → cellular organisms → Bacteria	7546	Open in IMG/M
3300031819\|Ga0318568_10218491	Not Available	1177	Open in IMG/M
3300031831\|Ga0318564_10251861	Not Available	783	Open in IMG/M
3300031833\|Ga0310917_10261360	Not Available	1167	Open in IMG/M
3300031835\|Ga0318517_10175867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Starkeya → unclassified Starkeya → Starkeya sp.	961	Open in IMG/M
3300031860\|Ga0318495_10306861	Not Available	706	Open in IMG/M
3300031896\|Ga0318551_10289329	Not Available	920	Open in IMG/M
3300031896\|Ga0318551_10354631	Not Available	830	Open in IMG/M
3300031897\|Ga0318520_10927553	Not Available	549	Open in IMG/M
3300031910\|Ga0306923_10684087	Not Available	1143	Open in IMG/M
3300031912\|Ga0306921_10027922	Not Available	6265	Open in IMG/M
3300031942\|Ga0310916_10900987	Not Available	741	Open in IMG/M
3300031946\|Ga0310910_10091398	Not Available	2242	Open in IMG/M
3300031954\|Ga0306926_10003536	All Organisms → cellular organisms → Bacteria → Proteobacteria	16199	Open in IMG/M
3300031954\|Ga0306926_10475881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1537	Open in IMG/M
3300031959\|Ga0318530_10001762	All Organisms → cellular organisms → Bacteria	5825	Open in IMG/M
3300032008\|Ga0318562_10081090	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1821	Open in IMG/M
3300032009\|Ga0318563_10272829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	914	Open in IMG/M
3300032025\|Ga0318507_10069486	Not Available	1425	Open in IMG/M
3300032039\|Ga0318559_10072966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Rubellimicrobium → Rubellimicrobium thermophilum → Rubellimicrobium thermophilum DSM 16684	1481	Open in IMG/M
3300032044\|Ga0318558_10180275	Not Available	1025	Open in IMG/M
3300032060\|Ga0318505_10279401	Not Available	787	Open in IMG/M
3300032064\|Ga0318510_10465108	Not Available	544	Open in IMG/M
3300032261\|Ga0306920_101525846	Not Available	953	Open in IMG/M
3300033290\|Ga0318519_10172407	Not Available	1221	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.69%
Host-Associated	Host-Associated	3.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.69%
Plants	Host-Associated → Plants	3.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.78%
Loam	Environmental → Terrestrial → Soil → Loam	13.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.66%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	45.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.65%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	35.10%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	24.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.32%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.66%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.66%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A01DRAFT_10095202	3300000580	Forest Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGAKPSQLVIHSATTASLPTVTPNVPAPETAVTAVAAEPVQPPAKSASPTRRSHHSARAQRRSH*
Ga0066395_100586592	3300004633	Tropical Forest Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGAKPPAAVIHSATTASLPTVTPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARAQRRSH*
Ga0066395_100822092	3300004633	Tropical Forest Soil	MLIVKYFLVVGAALTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPAADTNVAVEPSQPPPAKSASPGRRSHHSARVQRRSH*
Ga0066395_102161041	3300004633	Tropical Forest Soil	MMLILKYFLVVGALLTLGLIALNAHLLPDGAKPSQLVIHSATTASLPTVTPNVPAPETAVTAVAAEPVQPPAKSASPTRRSHHSARAQRRSH*
Ga0066672_100351532	3300005167	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVIHSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPTRRSHHSARVQRRSH*
Ga0066388_1022936452	3300005332	Tropical Forest Soil	FLVVGAVLTLGLIALNAHLLPDGSKPPTAVIHSATTASLPTVAPNVPPPETAVAAEPVQQPAKSASPTRRSHHSARAQRRSH*
Ga0008090_102093682	3300005363	Tropical Rainforest Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAIIHSPTTASLPTVTPNVPPTDTNVAVEPSQPPPAKSASTARRSHHSARVQRRSH*
Ga0070708_1017360561	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPPADTNVAAEPSQPPPAKSASPARRSHHSARVQRRSH*
Ga0070698_1014061581	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVIRSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPTR
Ga0070699_1000225954	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPPADTNAAAGPSQPPPAKSASPARRSHHSARVQRRSH*
Ga0070704_1003369351	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVIRSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPTRRSHHSARVQRRSH*
Ga0066661_100941752	3300005554	Soil	AAAFAARGAMMLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVIRSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPTRRSHHSARVQRRSH*
Ga0066700_100613972	3300005559	Soil	MMLILKYFLVVGTVLTLGLIALNAHLLPDGSKPPAAVIHSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPTRRSHHSARVQRRSH*
Ga0066905_1006442321	3300005713	Tropical Forest Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAIIHSPTTASLPTVAPNVPAADTNVAAEPSQPPPAKSASPARRSHHS
Ga0066905_1014797071	3300005713	Tropical Forest Soil	MLILKYFLVVGAVLTLGLIALNAHLLPNGSTAPAPVMHSPTTASLPTITPNVPAADTNVAAEPSQPPPAKSASSGRRSHHSARVQRRSH*
Ga0066905_1017092611	3300005713	Tropical Forest Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAIIHSPTTASLPTVTPNVPPTDTNVAVEPSQPPPAKSASTARRSHHSARVQRRSH*
Ga0066903_1001779562	3300005764	Tropical Forest Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKLPAAVIHSATTASLPTVAPNVPAPEASVAAEPVQPPAKSAAPTRRSHHSARAQRRSH*
Ga0066903_1051079761	3300005764	Tropical Forest Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAIIHSATTASLPTVTPNVPPTDTNVAVEPSQPPPAKSASPARRSHHSARVQRRSH*
Ga0066903_1054458711	3300005764	Tropical Forest Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGAKPSQLVIHSATTASLPTVTPNVPAPETAAPAVAAEPVQPPAKSASPTRRSHHSARAQRRSH*
Ga0066903_1063787501	3300005764	Tropical Forest Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKLPSAVIHSATTASLPTVAPNVPAPETAVAAEPVQPPPAKSASPTRRSRHSARVQRRSH*
Ga0081455_102917762	3300005937	Tabebuia Heterophylla Rhizosphere	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPATVIHSPTTASLPTVTPNVPPTDTNVVAEPSQPPPAKAASSARRSHHSARAQRRSH*
Ga0070712_1001018122	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVIRSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPTRRSHHSARVQRR
Ga0070765_1022981801	3300006176	Soil	MPRRLRLQGAMMLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVIHSATTASLPTVAPNVPAPETAVAAEPVQPPPKSAAPTRRSHHSARVQRRSH*
Ga0075433_101376012	3300006852	Populus Rhizosphere	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVIRSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPTRRSHHSARVQRRSH*
Ga0075434_1003435931	3300006871	Populus Rhizosphere	MMLILKYFLVVGTVLTLGLIALNAHLLPDGSKPPAAVIRSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPTRRSHHSARVQRRSH*
Ga0099792_101264302	3300009143	Vadose Zone Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVIHSATTASLPTVAPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARVQRRSH*
Ga0114129_124130151	3300009147	Populus Rhizosphere	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPPADTNVAAEPSQPPPAKSASPARRSHHSARVQRRSH*
Ga0126374_105998641	3300009792	Tropical Forest Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPAADTNVAAEPSQPPPAKSASPARRSHHSARAQRRSH*
Ga0126374_115571211	3300009792	Tropical Forest Soil	LTLGLIALNAHLLPDGSKLPSAVIHSATTASLPTVAPNVPAPETAVAAEPVQPPPAKSASPTRRSRHSARVQRRSH*
Ga0126374_116371251	3300009792	Tropical Forest Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKLPAAVIHSATTASLPTVAPNVPAPETSVAAEPVQAVQPPAKSAAPTRRSHHSARVQRRSH*
Ga0126380_104960322	3300010043	Tropical Forest Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPHGSKAPAAIIHSPTTASLPTVTPNVPPTDTNVAVEPSQPPPAKSASTARRSHHSARVQRRSH*
Ga0126380_107712481	3300010043	Tropical Forest Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVTPNVPPTDTNVVAEPSQPPAAKSASSARRSHHSARAQRRSH*
Ga0126380_122120621	3300010043	Tropical Forest Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVTPNVPPTDTNVAVEPSQPPPAKSASPARRSHHSARVQRRSH*
Ga0126384_100991212	3300010046	Tropical Forest Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPVAVIHSPTTASLPTVAPNVPAADTNVAAEPSQPPPAKSASPARRSHHSARAQRRSH*
Ga0126384_104409962	3300010046	Tropical Forest Soil	MMLIVKYFLVVGAALTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPAADTNVAVEPSQPPPAKSASPGRRSHHSARVQRRSH*
Ga0126384_107570722	3300010046	Tropical Forest Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGAKPPAAVIHSATTASLPTVTPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARAQRRSH*
Ga0126384_108345981	3300010046	Tropical Forest Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAIIHSPTTASLPTVTPNVPPTDTNVAVEPSQPPPAKSASTARRSHHSARVQRRS
Ga0126384_111811941	3300010046	Tropical Forest Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVIHSATTASLPTVAPNVPPPETRVAAEPDQPPAKSASPTRRSHHSARAQRRSH*
Ga0126384_118479961	3300010046	Tropical Forest Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAIIHSPTTASLPTVTPNVPPTDTNVVAEPSQPPPAKSASSARRMHHSARAQRRSH*
Ga0126384_122904691	3300010046	Tropical Forest Soil	MLILKYFLVVGTVLTLGLIALNAHLLPDGSKPSALVIHSATTASLPTVAPNVPAPEPSVAAEPVQAPAKSASPTRRSHHSARAQ
Ga0126382_102687042	3300010047	Tropical Forest Soil	MLILKYFLVVGAVLTLGLIALNAHLLPNGSTAPAPVMHSPTTASLPTITPNVPAADTNVAAEPSQPPPAKSASSARRSHHSARVQRRSH*
Ga0126382_125315291	3300010047	Tropical Forest Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPVAVIHSPTTASLPTVAPNVPAADTNVAAEPSQPPPAKSASPARRSHHSARVQRRSH*
Ga0126373_106848011	3300010048	Tropical Forest Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGAKAPAAVIHSATTASLPTVTPNVPAPETAVTAVAAEPVQPPAKSASPTRRSHHSARAQRRSH*
Ga0126373_109938622	3300010048	Tropical Forest Soil	MMLILKYFLVVGAALKHNLIALNAHLLPDGSKAPAAIIHSPTTASLPTVTPNVPPTDTNVAVEPSQPPPAKSASPARRSHHSARVQRRSH*
Ga0126370_104861081	3300010358	Tropical Forest Soil	MMLIVKYFLVVGAALTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPAADTNVAVEPSQPPPANSAPPGRRSHHSARVQRRSH*
Ga0126370_117492711	3300010358	Tropical Forest Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTAAPNVPAADTSVAAEPSQPPPAKSASPA
Ga0126370_124514141	3300010358	Tropical Forest Soil	RLNREVAALAARGGMMLILKYFLVVGALLTIDLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPAADTNVAAEPSQPPPAKSASPARRSHHSARVQRRSH*
Ga0126376_129393471	3300010359	Tropical Forest Soil	MLILKYFLVVGTVLTLGLIALNAHLLPDGSKPSALVIHSATTASLPTVAPNVPAPEPSVAAEPVQAPAKSASPTRRSHHSARAQRRSH*
Ga0126372_106379601	3300010360	Tropical Forest Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAIIHSPTTASLPTVAPNVPAADTNVAAEPSQPPPAKSASPARRSHHSARVQRRSH*
Ga0126372_116852821	3300010360	Tropical Forest Soil	MLILKYFLVVGAALTLGLIALNAHLLPDGSKAPAAVIHSATTASLPTVAPNVPAPETTVAAEPVQPPAKSASPTRRSHHSGRAQRRSH*
Ga0126378_114950421	3300010361	Tropical Forest Soil	MMLIVKYFLVVGAALTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPAADTNVAVEPSQPPPAKSAPPGRRSHHSARVQRRSH*
Ga0126379_110003941	3300010366	Tropical Forest Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAIIHSPTTASLPTVTPNVPPTDTNVAVEPSQPPPAKSASPARRSHHSARVQRRSH*
Ga0126379_115475581	3300010366	Tropical Forest Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPATVIHSPTTASLPTVTPNVPPTDTNVVAEPSQPPPAKSASPARRTHHSARVQRRSH*
Ga0126379_116764422	3300010366	Tropical Forest Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPVAVIHSPTTASLPTVAPNVPAADTNVAAEPSQPPPAKSASP
Ga0126379_138119901	3300010366	Tropical Forest Soil	MLILKYFLVVGAALTLGLIALNAHLLPDGSKAPAAVIHSATTASLPTVAPNVPAPETTVAAEPVQPPAKSASPTRRSHHSARAQRRSH*
Ga0126381_1010739612	3300010376	Tropical Forest Soil	MMLVLKYFLVVGAVLTLGLIALNAHLLPDGAKPPAAVIHSATTASLPTVTPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARAQRRSH*
Ga0126383_100443711	3300010398	Tropical Forest Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPNGSTAPAPVMHSPTTASLPTITPNVPAADTNVAAEPSQPPPAKSASSARRSHHSARVQRRSH*
Ga0126383_105576381	3300010398	Tropical Forest Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPTAVIHSATTASLPTVAPNVPPPETAVAAEPVQQPAKSASPTRRSHHSARAQRRSH*
Ga0126383_117582811	3300010398	Tropical Forest Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTAAPNVPAADTNVAAEPSQPPPAKSASPARRSHHSARVQRRSH*
Ga0126383_134678001	3300010398	Tropical Forest Soil	MMLILKYFLVVGAALKKGLIALNAHLLPDGSKAPATVIHSPTTASLPTVTPNVPPTDTTVAVEPSQPPAAKSASSARRSHHSARVQRRSH*
Ga0124850_10104472	3300010863	Tropical Forest Soil	MKLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPVAVIHSPTTASLPTVAPNVPAADTNVAAEPSQPPPAKSASPARRSHHSARAQRRSH*
Ga0137383_100216552	3300012199	Vadose Zone Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVVHSPTTASLPTVAPNVPPADTNVAAEPSQPPPAKSASTARRSHHSARVQRRSH*
Ga0137382_102511122	3300012200	Vadose Zone Soil	MMLILKYFLVVGTVLTLGLIALNAHLLPDGSKPPAAVIRSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPTRRSHHSARVQRR
Ga0137365_100335313	3300012201	Vadose Zone Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPPADTNVAAEPSQPPPAKSASTARRSHHSARVQRRSH*
Ga0137365_113136141	3300012201	Vadose Zone Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVIHSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASP
Ga0137363_101282362	3300012202	Vadose Zone Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPPADTDVAAEPSQPPPAKSASPARRSHHSARVQRRSH*
Ga0137380_102136611	3300012206	Vadose Zone Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPPADTNAAAGPSQPPPAKSASTARRSHHSARVQRRSH*
Ga0137378_105765932	3300012210	Vadose Zone Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVIRSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPTRRSHHSARA
Ga0137377_107355242	3300012211	Vadose Zone Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVIHSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPTRRSHHSARAQRRSH*
Ga0137387_109843331	3300012349	Vadose Zone Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPPADTNVAAEPSQPPPAKSAS
Ga0137366_103735551	3300012354	Vadose Zone Soil	MMLILKYFLVVAAVLKLKLIALNAHLLPDGSKAPAAVVHSPTTASLPTVAPNVPPADTNVAAEPSQPPPAKSASTARRSHHSARVQRRSH*
Ga0137407_105619651	3300012930	Vadose Zone Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPPADTNVAAEPSQPPPAKSASPTR
Ga0126375_118690131	3300012948	Tropical Forest Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPATVIHSPTTASLPTVTPNVPPTDTNVVAEPSQPPPAKSASPAR
Ga0126369_117674211	3300012971	Tropical Forest Soil	MMLILKYFLVVGAALTLGLIALNAHLLPDGAKPPAAVIHSATTASLPTVTPNVPAPETAVTAEPVQPPARSASPTRRSHHSARAQRRSH*
Ga0164309_100989931	3300012984	Soil	MPRRWRREGAMMLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVIHSATTASLPTVAPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARVQRRSH*
Ga0164305_115799591	3300012989	Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVIRSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPTRRSHHSARVQRRSVRRGVDP
Ga0182041_107435172	3300016294	Soil	MLILKYFLVVGTVLTLGLIALNAHLLPDGAKPSALVIHSATTASLPTVAPNVPAPEPSVAAEPVQPPAKSASPTRRSHHSARVQRR
Ga0182033_105109162	3300016319	Soil	MLILKYFLVVGTVLTLGLIALNAHLLPDGSKPPAAVFHSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPRRRSHHS
Ga0182033_107329102	3300016319	Soil	ILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVIHSATTASVPTVAPNVPPPEASVAAEPVQPPAKSAAPTRRSHHSARVQRRSH
Ga0182035_122008271	3300016341	Soil	AAALAARGGTMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPAADTNVAAEPSQPPPAKSAPPARRSHHSARVQRRSH
Ga0182032_102515812	3300016357	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTAAPNVPAADTNVAAEPSRPPPAKSASPARRSHHSARVQRRSH
Ga0182032_103815132	3300016357	Soil	MLILKYFLVVGTVLTLGLIALNAHLLPDGAKPSALVIHSATTASLPTVAPNVPAPEPSVAAEPVQPPAKSASPTRRSHHSARA
Ga0182040_104109422	3300016387	Soil	MLILKYFLVVGTVLTLGLIALNAHLLPDGSKPPAAVFHSATTASLPTVAPNVPPPETSVAVEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0182038_100824422	3300016445	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAIIHSPTTASLPTVTPNVPRTDTNVAVEPSQPPPAKSASPARRSHHSARVQRRSH
Ga0066662_112984112	3300018468	Grasslands Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPATVIHSPTTASLPTIAPNVPPVDTNVAAEPSQPPPAKSASTARRSHHSARVQ
Ga0210400_112424811	3300021170	Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKLPAAVIHSATTASLPTVAPNVPAPETTVAAEPVQPPPKSAAPTRRSHHSARVQRRSPCHPTPSL
Ga0126371_107131832	3300021560	Tropical Forest Soil	MLIVKYFLVVGAALTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPAADTNVAVEPSQPPPAKSASPGRRSHHSARVQRRSH
Ga0126371_107162762	3300021560	Tropical Forest Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGAKAPAAVIHSATTASLPTVTPNVPAPETAVTAVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0207646_105629551	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVIHSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPTRRSHHSARVQRRSH
Ga0209647_100109519	3300026319	Grasslands Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPGAVIHSATTASLPTVAPNVPPPETSVAAQPVQPPAKSASPTRRSHHSARVQRRSH
Ga0209003_10245902	3300027576	Forest Soil	MGVPRRLRCEGATMLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVIHSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPTRRSHHSARVQRRSH
Ga0209465_100298043	3300027874	Tropical Forest Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPVAVIHSPTTASLPTVAPNVPAADTNVAAEPSQPPPAKSASPARRSHHSARVQRRSH
Ga0209382_118744491	3300027909	Populus Rhizosphere	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPPADTNVAAEPSQPPPAKSASPARRSHHSARVQRRSH
Ga0222749_102202541	3300029636	Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKLPAAVIHSATTASLPTVAPNVPAPETTVAAEPVQPPPKSAAPTRRSHHSARVQRRSH
Ga0318516_100014683	3300031543	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAIIHSPTTASLPTVTPNVPPTDTNVAVEPSQPPPAKSASPARRSHHSARVQRRSH
Ga0318516_1000179610	3300031543	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPAADTNVAAEPSQPPPAKSASPARRSHHSARVQRRSH
Ga0318516_100869331	3300031543	Soil	MLVLKYFLVVGAVLTLGLIALNAHLLPDGAKPPAAVIHSATTASLPTVTPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0318534_100480961	3300031544	Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGAKPPAAVIHSATTASLPTVTPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0318534_102174431	3300031544	Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAIIHSPTTASLPTVTPNVPPTDTNVAVEPSQPPPAKSASPARRSHHSARVQRRSH
Ga0318541_100957592	3300031545	Soil	MLILKYFLVVGTALTLGLIALNAHLLPDGSKAPAAVIHSATTASLPTVAPNVPAPETTVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0318541_104206071	3300031545	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPTAVIHSATTASLPTVAPNVPPPETAVAAEPVQQPAKSASPTRRSHHSARAQRRSH
Ga0318538_101067152	3300031546	Soil	MMLVLKYFLVVGAVLTLGLIALNAHLLPDGAKPPAAVIHSATTASLPTVTPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0318538_106036841	3300031546	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGAKAPAAVIHSATTASLPTVTPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0318573_100277833	3300031564	Soil	MLVLKYFLVVGAVLTLGLIALNAHLLSDGAKPPAAVIHSATTASLPTVTPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0318515_100105197	3300031572	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGAKPPAAVIHSATTASLPTVTPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0310915_108038971	3300031573	Soil	ILKYFLVVGAALTLGLIALNAHLLPDGSKPPAAVIHSATTASVPTVAPNVPPPEASVAAEPVQPPAKSAAPTRRSHHSARVQRRSH
Ga0310915_109440821	3300031573	Soil	MLILKYFLVVGTVLTLGLIALNAHLLPDGSKPPAAVFHSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0318555_102872861	3300031640	Soil	MLILKYFLVVGTALTLGLIALNAHLLPDGSKAPAAVIHSATTASLPTVAPNVPAPETTVATEPVQPPAKSASPTRRSHHSARVQRRSH
Ga0318561_100678131	3300031679	Soil	MLILKYFLVVGTALTLGLIALNAHLLPDGSKAPAAVIHSATTASLPTVAPNVPAPETTVAAEPVQPPAKSASPTRRSHHSARAQRRS
Ga0318560_100986832	3300031682	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPAADTNVAAEPSQPPPAKSASPARRSHHSARVQPRSH
Ga0318496_104847641	3300031713	Soil	AVLTLGLIALNAHLLPDGAKAPAAVIHSATTASLPTVTPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0318493_100849931	3300031723	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTAAPNVPAADTNVAAEPSRPPPAKSASPAR
Ga0306918_103228132	3300031744	Soil	MLILKYFLVVGTVLTLGLIALNAHLLPDGAKPSALVIHSATTASLPTVAPNVPAPEPSVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0318502_104349271	3300031747	Soil	DAAGHAARGAMMLILKYFLVVGAVLTLGLIALNAHLLPDGAKAPAAVIHSATTASLPTVTPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0318502_106062321	3300031747	Soil	MLILKYFLVVGAALTLGLIALNAHLLPDGSKAPAAVIHSATTASLPTVAPNVPAPETTVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0318526_101260771	3300031769	Soil	MPRRLRLQGALMLILKYFLVVGTVLTLGLIALNAHLLPDGSKPPAAVFHSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPTRRSHHSARAQRR
Ga0318521_106767321	3300031770	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPTAVIHSATTASLPTVAPNVPPPEASVAAEPVQPPAKSAAPTRRSHHSARVQR
Ga0318546_100070438	3300031771	Soil	MLILKYFLVVGAVLALGLIALNAHLLPDGSKAPAAIIHSPTTASLPTVTPNVPPTDTNVAVEPSQPPPAKSASPARRSHHSARVQRRSH
Ga0318546_100753271	3300031771	Soil	MPRRLRLQGALMLILKYFLVVGTVLTLGLIALNAHLLPDGSKPPAAVFHSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPTRRSHHSARAQR
Ga0318546_107696062	3300031771	Soil	MLILKYFLVVGTALTLGLIALNAHLLPDGSKAPAAVIHSATTASLPTVAPNVPAPETTVAAEPVQPPAKSASPTRRSHH
Ga0318566_100078424	3300031779	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAIIHSPTTASLPTVTPNVPPTDTNVAVEPSQPPPAKSASPARRSHHSA
Ga0318566_102061361	3300031779	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGAKPPAAVIHSATTASLRTVTPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0318566_102655751	3300031779	Soil	MLILKYFLVVGTALTLGLIALNAHLLPDGSKAPAAVIHSATTASLPTVAPNVPAPETTVAAEPVQPPAKSASPTRRSHHS
Ga0318547_102273491	3300031781	Soil	NRDAATLAARGGMMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTAAPNVPAADTNVAAEPSQPPPAKSASPARRSHHSARVQRRSH
Ga0318529_103113131	3300031792	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVIHSATTASLPTVAPNVPPPETAVAAEPVQQPAKSASPTRRSHHSARAQRRSH
Ga0318550_100378352	3300031797	Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKPPAAVFHSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0318523_100015761	3300031798	Soil	FLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTAAPNVPAADTNVAAEPSQPPPAKSASPARRSHHSARVQRRSH
Ga0318568_102184912	3300031819	Soil	GAMMLVLKYFLVVGAVLTLGLIALNAHLLPDGAKPPAAVIHSATTASLPTVTPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0318564_102518611	3300031831	Soil	MPRRLRLQGALMLILKYFLVVGTVLTLGLIALNAHLLPDGSKPPAAVFHSATTASLPTVAPNVPPPETSVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0310917_102613602	3300031833	Soil	MMLILKYFLVVGAALTLGLIALNAHLLPDGSKPPAAVIHSATTASLPTVAPNVPPPEASVAAEPVQPPAKSAAPTRRSHHSARVQRRSH
Ga0318517_101758672	3300031835	Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTAAPNVPAADTNVAAEPSQPPPAKSASPARRSHHSARVQRRSH
Ga0318495_103068612	3300031860	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAIIHSPTTASLPTVTPNVPPTDTNVAVEPSQPPPAKSASPARRSHH
Ga0318551_102893292	3300031896	Soil	MLILKYFLVVGTVLTLGLIALNAHLLPDGAKPSALVIHSATTASLPTVAPNVPAPEPSVAAEPVQPPAKSASPTRRSHHSARAQR
Ga0318551_103546311	3300031896	Soil	GHAARGAMMLILKYFLVVGAVLTLGLIALNAHLLPDGAKAPAAVIHSATTASLPTVTPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0318520_109275531	3300031897	Soil	LKYFLVVGAVLTLGLIALNAHLLPDGSKLPAAVIHSATTASLPTVAPNVPAPETSVAAEPVQPPPKSASPTRRSHHSARVQRRSH
Ga0306923_106840872	3300031910	Soil	MMLILKYFLVVGAVLTLGLIALNAHLLPDGAKAPAAVIHSATTASLPTVTPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0306921_100279229	3300031912	Soil	MLILKYFLVVGAALTLGLIALNAHLLPDGSKPPAAVIHSATTASLPTVAPNVPPPEASVAAEPVQPPAKSAAPTRRSHHSARVQRRSH
Ga0310916_109009871	3300031942	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGAKPPAAVIHSATTASLPTVTPNVPAPETAVAAEPVQPPAKSASPTRRSHH
Ga0310910_100913981	3300031946	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKLPAAVIHSATTASLPTVAPNVPAPETSVAAEPVQPPPKSASPTRRSHHSARVQRRSH
Ga0306926_1000353619	3300031954	Soil	MLILKYFLVVGTVLTLGLIALNAHLLPDGSKPPAAVFHSATTASLPTVAPNVPSPETSVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0306926_104758812	3300031954	Soil	MLILKYFLVVGAALTLGLIALNAHLLPDGAKLPAAVIHSATTASLPTVTPNVPAPETAVAAEPIQPPAKSASPTRRSHHSARAQRRSH
Ga0318530_100017622	3300031959	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTAAPNVPAADTNVAAEPSQPPPAKSASPARRSHHSARVQRRSY
Ga0318562_100810901	3300032008	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTVAPNVPAADTNVAAEPSQPPPAKSASPARRSHH
Ga0318563_102728291	3300032009	Soil	MLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTAAPNVPAADTNVAAEPSQPPPAKSASPARRSHHSARVQRR
Ga0318507_100694861	3300032025	Soil	KYFLVVGAVLTLGLIALNAHLLPDGAKPPAAVIHSATTASLPTVTPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0318559_100729661	3300032039	Soil	MLILKYFLVVGTVLTLGLIALNAHLLPDGSKPPAAVFHSATTASLPTVAPNVPSPETSVAAEPVQPPAKSASPTRRSHH
Ga0318558_101802751	3300032044	Soil	LNRDAATLAARGGMMLILKYFLVVGAVLTLGLIALNAHLLPDGSKAPAAVIHSPTTASLPTAAPNVPAADTNVAAEPSQPPPAKSASPARRSHHSARVQRRSH
Ga0318505_102794012	3300032060	Soil	MLILKYFLVVGTVLTLGLIALNAHLLPDGSKPPAAVFHSATTASLPTVAPNVPPPETSVAVEPVQPPAKSASPTRRSHHSARAQ
Ga0318510_104651081	3300032064	Soil	MPRRLRLQGALMLILKYFLVVGTVLTLGLIALNAHLLPDGSKPPAAVFHSATTASLPTVAPNVPPPETSVAVEPVQPPAKSASPTRRSHHSARAQRRSH
Ga0306920_1015258461	3300032261	Soil	MLILKYFLVVGAALTLGLIALNAHLLPDGSKPPAAVFHSATTASLPTVAPNVPAPETAVAAEPVQPLAKSASPTRRSHHSARAQRRSH
Ga0318519_101724072	3300033290	Soil	AMMLILKYFLVVGAVLTLGLIALNAHLLPDGAKAPAAVIHSATTASLPTVTPNVPAPETAVAAEPVQPPAKSASPTRRSHHSARAQRRSH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F046525

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences