Metagenome / Metatranscriptome Family F046515

Basic Information
Family ID	F046515
Family Type	Metagenome / Metatranscriptome
Number of Sequences	151
Average Sequence Length	46 residues
Representative Sequence	MKGRILDRVVAAEREHRSVALATDLATGRQLLLDGEHAEGDLALPD
Number of Associated Samples	124
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.34 %
% of genes near scaffold ends (potentially truncated)	99.34 %
% of genes from short scaffolds (< 2000 bps)	89.40 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Most Common Taxonomy
Group	Bacteria (99.338 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (51.656 % of family members)
Environment Ontology (ENVO)	Unclassified (50.993 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (43.046 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.22% β-sheet: 21.62% Coil/Unstructured: 62.16%
Feature Viewer

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Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF02625	XdhC_CoxI	68.87
PF05762	VWA_CoxE	28.48
PF01502	PRA-CH	0.66
PF07728	AAA_5	0.66
PF03450	CO_deh_flav_C	0.66
PF03576	Peptidase_S58	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG1975	Molybdoenzyme maturation factor PaoD (Mo cofactor insertion), XdhC/CoxF family	Posttranslational modification, protein turnover, chaperones [O]	68.87
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	1.32
COG0139	Phosphoribosyl-AMP cyclohydrolase	Amino acid transport and metabolism [E]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.34 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.34 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.34 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	99.34 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	67.55 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	30.46 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	67.55 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	30.46 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	43.05 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	30.46 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.32 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	36.42 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	30.46 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	6.62 %
Inquilinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus	0.66 %
Unclassified	root	N/A	0.66 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	36.42 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	30.46 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	6.62 %
Inquilinus limosus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	0.66 %
Unclassified	root	N/A	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10368898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Inquilinus → Inquilinus limosus	582	Open in IMG/M
3300003351\|JGI26346J50198_1004509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1327	Open in IMG/M
3300005435\|Ga0070714_101142451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	759	Open in IMG/M
3300005587\|Ga0066654_10933998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	500	Open in IMG/M
3300005764\|Ga0066903_104363736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	756	Open in IMG/M
3300006175\|Ga0070712_101071806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	699	Open in IMG/M
3300006755\|Ga0079222_12079643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	561	Open in IMG/M
3300007076\|Ga0075435_100974888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	740	Open in IMG/M
3300009090\|Ga0099827_11107531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	688	Open in IMG/M
3300009525\|Ga0116220_10192372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	882	Open in IMG/M
3300009698\|Ga0116216_10989554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	503	Open in IMG/M
3300010048\|Ga0126373_12418788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	585	Open in IMG/M
3300010360\|Ga0126372_10715112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	980	Open in IMG/M
3300010360\|Ga0126372_10916335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	881	Open in IMG/M
3300010362\|Ga0126377_10140139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2260	Open in IMG/M
3300010362\|Ga0126377_12669614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	574	Open in IMG/M
3300010376\|Ga0126381_100343687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2060	Open in IMG/M
3300010376\|Ga0126381_102959060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	675	Open in IMG/M
3300010398\|Ga0126383_11197408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	849	Open in IMG/M
3300010400\|Ga0134122_11039064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	806	Open in IMG/M
3300011120\|Ga0150983_12009557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1011	Open in IMG/M
3300012180\|Ga0153974_1144460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	557	Open in IMG/M
3300012202\|Ga0137363_10642524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	897	Open in IMG/M
3300012224\|Ga0134028_1094326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	657	Open in IMG/M
3300012349\|Ga0137387_10757486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	702	Open in IMG/M
3300012363\|Ga0137390_10829814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	881	Open in IMG/M
3300012363\|Ga0137390_11741585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	556	Open in IMG/M
3300012376\|Ga0134032_1262898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	561	Open in IMG/M
3300012469\|Ga0150984_117945361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	612	Open in IMG/M
3300012927\|Ga0137416_10414198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1144	Open in IMG/M
3300012930\|Ga0137407_10360629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1340	Open in IMG/M
3300015241\|Ga0137418_10960932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	622	Open in IMG/M
3300016270\|Ga0182036_10170703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1568	Open in IMG/M
3300016294\|Ga0182041_10033616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3313	Open in IMG/M
3300016341\|Ga0182035_11238714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	667	Open in IMG/M
3300016357\|Ga0182032_11228874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	645	Open in IMG/M
3300016357\|Ga0182032_11665474	All Organisms → cellular organisms → Bacteria → Proteobacteria	556	Open in IMG/M
3300016387\|Ga0182040_10026043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3342	Open in IMG/M
3300016387\|Ga0182040_11171316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	646	Open in IMG/M
3300016404\|Ga0182037_10082695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2259	Open in IMG/M
3300016422\|Ga0182039_10043582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3001	Open in IMG/M
3300016422\|Ga0182039_10279712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1373	Open in IMG/M
3300016422\|Ga0182039_11083611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	721	Open in IMG/M
3300017822\|Ga0187802_10068529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1314	Open in IMG/M
3300017822\|Ga0187802_10333610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	594	Open in IMG/M
3300017926\|Ga0187807_1259627	Not Available	571	Open in IMG/M
3300017970\|Ga0187783_10300300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1171	Open in IMG/M
3300018433\|Ga0066667_11499777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	596	Open in IMG/M
3300018482\|Ga0066669_12228862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	520	Open in IMG/M
3300020199\|Ga0179592_10174874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	978	Open in IMG/M
3300020581\|Ga0210399_10138957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2004	Open in IMG/M
3300020583\|Ga0210401_10288081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1502	Open in IMG/M
3300021151\|Ga0179584_1196721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	831	Open in IMG/M
3300021178\|Ga0210408_11044717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	630	Open in IMG/M
3300021180\|Ga0210396_10375633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1251	Open in IMG/M
3300021181\|Ga0210388_10552384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1009	Open in IMG/M
3300021377\|Ga0213874_10350031	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	566	Open in IMG/M
3300021401\|Ga0210393_11034957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	664	Open in IMG/M
3300021432\|Ga0210384_10054028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3640	Open in IMG/M
3300021475\|Ga0210392_10335209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1091	Open in IMG/M
3300022522\|Ga0242659_1001256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2583	Open in IMG/M
3300022533\|Ga0242662_10211464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	615	Open in IMG/M
3300022533\|Ga0242662_10289475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	543	Open in IMG/M
3300022708\|Ga0242670_1018063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	818	Open in IMG/M
3300022709\|Ga0222756_1006929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1212	Open in IMG/M
3300022713\|Ga0242677_1058722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	581	Open in IMG/M
3300022716\|Ga0242673_1084492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	590	Open in IMG/M
3300025898\|Ga0207692_11157510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	513	Open in IMG/M
3300025905\|Ga0207685_10553676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	612	Open in IMG/M
3300025915\|Ga0207693_10655432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	815	Open in IMG/M
3300025915\|Ga0207693_10809171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	722	Open in IMG/M
3300026340\|Ga0257162_1046848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	546	Open in IMG/M
3300026494\|Ga0257159_1100350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	507	Open in IMG/M
3300026498\|Ga0257156_1025195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1193	Open in IMG/M
3300026508\|Ga0257161_1004150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2474	Open in IMG/M
3300027070\|Ga0208365_1028665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	730	Open in IMG/M
3300027521\|Ga0209524_1084284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	668	Open in IMG/M
3300027701\|Ga0209447_10043787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1237	Open in IMG/M
3300030730\|Ga0307482_1202060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	604	Open in IMG/M
3300030738\|Ga0265462_12061878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	557	Open in IMG/M
3300031446\|Ga0170820_10387097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	519	Open in IMG/M
3300031469\|Ga0170819_13837196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	611	Open in IMG/M
3300031474\|Ga0170818_107718112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	620	Open in IMG/M
3300031544\|Ga0318534_10077110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1891	Open in IMG/M
3300031561\|Ga0318528_10213029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1034	Open in IMG/M
3300031561\|Ga0318528_10770711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	514	Open in IMG/M
3300031572\|Ga0318515_10549163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	615	Open in IMG/M
3300031668\|Ga0318542_10009460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3633	Open in IMG/M
3300031668\|Ga0318542_10741386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	514	Open in IMG/M
3300031680\|Ga0318574_10015578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3592	Open in IMG/M
3300031680\|Ga0318574_10347471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	865	Open in IMG/M
3300031713\|Ga0318496_10544725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	641	Open in IMG/M
3300031720\|Ga0307469_11841304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	585	Open in IMG/M
3300031724\|Ga0318500_10388748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	692	Open in IMG/M
3300031736\|Ga0318501_10784420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	527	Open in IMG/M
3300031747\|Ga0318502_10876004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	545	Open in IMG/M
3300031751\|Ga0318494_10807734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	549	Open in IMG/M
3300031763\|Ga0318537_10301142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	593	Open in IMG/M
3300031764\|Ga0318535_10444130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	578	Open in IMG/M
3300031777\|Ga0318543_10063301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1535	Open in IMG/M
3300031779\|Ga0318566_10332509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	751	Open in IMG/M
3300031780\|Ga0318508_1258591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	501	Open in IMG/M
3300031781\|Ga0318547_10076993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1861	Open in IMG/M
3300031793\|Ga0318548_10101507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1378	Open in IMG/M
3300031793\|Ga0318548_10374702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	698	Open in IMG/M
3300031796\|Ga0318576_10382810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	665	Open in IMG/M
3300031796\|Ga0318576_10576367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	530	Open in IMG/M
3300031798\|Ga0318523_10495332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	605	Open in IMG/M
3300031799\|Ga0318565_10039109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2172	Open in IMG/M
3300031819\|Ga0318568_11000974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	516	Open in IMG/M
3300031832\|Ga0318499_10207525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	763	Open in IMG/M
3300031832\|Ga0318499_10250110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	688	Open in IMG/M
3300031846\|Ga0318512_10132411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1193	Open in IMG/M
3300031859\|Ga0318527_10035054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1891	Open in IMG/M
3300031893\|Ga0318536_10639335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	531	Open in IMG/M
3300031897\|Ga0318520_10011259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3916	Open in IMG/M
3300031897\|Ga0318520_10272250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1015	Open in IMG/M
3300031897\|Ga0318520_10305542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	959	Open in IMG/M
3300031912\|Ga0306921_11556454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	720	Open in IMG/M
3300031942\|Ga0310916_10329817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1295	Open in IMG/M
3300031942\|Ga0310916_11745908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	502	Open in IMG/M
3300031945\|Ga0310913_10520072	All Organisms → cellular organisms → Bacteria → Proteobacteria	845	Open in IMG/M
3300031945\|Ga0310913_10586098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	791	Open in IMG/M
3300031946\|Ga0310910_10045029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3082	Open in IMG/M
3300031947\|Ga0310909_10548891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	967	Open in IMG/M
3300031954\|Ga0306926_11470494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	787	Open in IMG/M
3300031981\|Ga0318531_10395518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	625	Open in IMG/M
3300032001\|Ga0306922_11730129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	618	Open in IMG/M
3300032001\|Ga0306922_11928720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	577	Open in IMG/M
3300032001\|Ga0306922_12376400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	506	Open in IMG/M
3300032010\|Ga0318569_10485205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	576	Open in IMG/M
3300032025\|Ga0318507_10276590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	729	Open in IMG/M
3300032035\|Ga0310911_10744985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	567	Open in IMG/M
3300032039\|Ga0318559_10280437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	772	Open in IMG/M
3300032042\|Ga0318545_10111560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	962	Open in IMG/M
3300032042\|Ga0318545_10179900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	755	Open in IMG/M
3300032043\|Ga0318556_10409452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	709	Open in IMG/M
3300032044\|Ga0318558_10328621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	757	Open in IMG/M
3300032044\|Ga0318558_10676848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	516	Open in IMG/M
3300032059\|Ga0318533_10088039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2130	Open in IMG/M
3300032063\|Ga0318504_10519600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	571	Open in IMG/M
3300032064\|Ga0318510_10118962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1021	Open in IMG/M
3300032066\|Ga0318514_10764016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	514	Open in IMG/M
3300032076\|Ga0306924_11137946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	848	Open in IMG/M
3300032076\|Ga0306924_11763383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	646	Open in IMG/M
3300032091\|Ga0318577_10467722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	601	Open in IMG/M
3300032205\|Ga0307472_100395039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	1154	Open in IMG/M
3300032261\|Ga0306920_103380216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	593	Open in IMG/M
3300033289\|Ga0310914_10680843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	924	Open in IMG/M
3300033289\|Ga0310914_11376103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	608	Open in IMG/M
3300033290\|Ga0318519_10961340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	529	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.35%
Host-Associated	Host-Associated	2.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.04%
Aquatic	Environmental → Aquatic	3.31%
Plants	Host-Associated → Plants	1.99%
Fungi	Host-Associated → Fungi	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.04%
Freshwater	Environmental → Aquatic → Freshwater	3.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.32%
Roots	Host-Associated → Plants → Roots	0.66%
Mycelium	Host-Associated → Fungi → Mycelium	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.09%
Loam	Environmental → Terrestrial → Soil → Loam	7.28%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.66%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.66%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	68.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.31%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.99%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.99%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.32%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.66%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.66%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	51.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.58%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.30%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.99%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.32%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.32%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.32%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.66%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.66%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.66%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.66%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.66%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003351	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012224	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F046515

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_103688983	3300001867	Forest Soil	MKGRILDRIVAAEREHRSVALATDLATGRQLLFEGEHAEGDLALDEAALEKLREA
JGI26346J50198_10045093	3300003351	Bog Forest Soil	MKGRILDAVIAAGRASRSVALATDLATGRQLLVDEASIEGDLALNAAALAEI
Ga0070714_1011424513	3300005435	Agricultural Soil	MKGRILDRVVAAEREHRSVALATDLATGRQLLFEGEHAEG
Ga0066654_109339981	3300005587	Soil	MKGRILDRVVAAARDHRSVAVATDLATGRQLLLDGEQPEGDLALDDTALDRI
Ga0066903_1043637363	3300005764	Tropical Forest Soil	MKGRTLDHVVAAARDHRSVALATNLTTGRQLLLDGDQVE
Ga0070712_1010718061	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKGRILDRVVAAEREHRSVALATDLATGRQLLFEGEHAEGD
Ga0079222_120796433	3300006755	Agricultural Soil	MKGRILDRVVAAEREHRSVALATDLATGRQLLLDDERPEGDLTLDDGALE
Ga0075435_1009748881	3300007076	Populus Rhizosphere	MKARILDQVVAAEREHRSVALATDLTTGRQLLFEGGQAEGDLALDDAAL
Ga0099827_111075311	3300009090	Vadose Zone Soil	MKGYILDRVVAAEREHRSVALATDLATGRQLLLDGEHAEG
Ga0116220_101923721	3300009525	Peatlands Soil	MKGRILDRVVAAEREHRSVALATNLATGRQLLLDGEHAEGDLALDDAVLERVR
Ga0116216_109895541	3300009698	Peatlands Soil	MKGRILDRVVAAEREHRSVALATDLATGRQLLLDGEHAE
Ga0126373_124187883	3300010048	Tropical Forest Soil	MKGRTLDHVVAAARGHRSVALATDLHTGRQLLLDGE
Ga0126372_107151121	3300010360	Tropical Forest Soil	MKGRILDRVVTAAREHRSVALATDLSTGQQVLFDGTQADGDLTLDDA
Ga0126372_109163351	3300010360	Tropical Forest Soil	MKGRTLDHVVAAARDHRSVALATDLRTGRQLLLDSEQVEGDLALEDSALDRVRNAWRS
Ga0126377_101401394	3300010362	Tropical Forest Soil	MKRPVLDAIVAAGRDSRSVALATDLASGRQLLVDE
Ga0126377_126696142	3300010362	Tropical Forest Soil	MKGHTLDHVVAAARDHRSVALATDLTTGRQLLLDGE
Ga0126381_1003436874	3300010376	Tropical Forest Soil	MKGRTLDHVVAAARDHRSVALATNLTTGRQLLLDGDQV
Ga0126381_1029590601	3300010376	Tropical Forest Soil	MKGRTLDHVVAAARDHRSVALATDLTTGRQLLLDGEQAEGDLALEGAALDK
Ga0126383_111974083	3300010398	Tropical Forest Soil	MKGRILDRVVAAEREHRSVALATELVTGRQLLLEDERTEGDLALDDAALE
Ga0134122_110390641	3300010400	Terrestrial Soil	MKGRILDRVVAAEREHRSVALATDLATGRQLLFEGEHA
Ga0150983_120095571	3300011120	Forest Soil	MKGRILDRVVAAEREHRSVALATDLATGRQMLLDGGHAEG
Ga0153974_11444601	3300012180	Attine Ant Fungus Gardens	MKERTLDHVVGAARDHRSVALATDLETGQQLLLDGRDADG
Ga0137363_106425241	3300012202	Vadose Zone Soil	MKGRILDRVVAAERDHRSVALATDLATGRQLLFEGEHAEGDLALDDAALDR
Ga0134028_10943261	3300012224	Grasslands Soil	MKGRILDRVVAAEREHRSVALATDLATGRQLLFEGEHAEGDLAFDD
Ga0137387_107574861	3300012349	Vadose Zone Soil	MKGRILDAVMAAGRDSRSVALATDLATGRQLFVDGGST
Ga0137390_108298141	3300012363	Vadose Zone Soil	MKGRILDRVVAAERDHRSVALATDLATGRQALVDEASTEGDLTLDAAALAEVRQALH
Ga0137390_117415852	3300012363	Vadose Zone Soil	MKGRILDKVVAAERAHRSVALATDLATGRQLLFDGEHAEGDLTLDDAALDGVR
Ga0134032_12628982	3300012376	Grasslands Soil	MKGRILDRVVAAEREHRSVAIASDLATGRQLLFEGEHAE
Ga0150984_1179453611	3300012469	Avena Fatua Rhizosphere	MKGRILDRLVAAEREHRSVALATDLATGGQLLLDGDDVDGDLTLDEAALDRTR
Ga0137416_104141981	3300012927	Vadose Zone Soil	MKARILDAVIAAGRESGSVALATDLATGRQVLVDG
Ga0137407_103606293	3300012930	Vadose Zone Soil	MKGRILDHLVAAEREHRSVALATDLATGRQLLLDREQAEGDLALDTAALDRVRE
Ga0137418_109609321	3300015241	Vadose Zone Soil	MKGRILDHLVAAEREHRSVALATDLATGRQLLLDREQAEGDLELDTAALDRVRE
Ga0182036_101707031	3300016270	Soil	MKGRILDRVVAAEREHRSVALATDLATGRQLLLDGEHAEGDLALDDAVLDR
Ga0182041_100336166	3300016294	Soil	MKGRILDRVVAAERDHRSVALATELASGRQLLLDGEQPEGDLTLD
Ga0182035_112387143	3300016341	Soil	MRGRVLDALIGTSRESRSAALATDLATGRQLLVDEDRAE
Ga0182032_112288741	3300016357	Soil	MKGRILDRVVAAEREHRSVALATDLATGRQLLLDGEHAEGDLALDDGVLDRV
Ga0182032_116654741	3300016357	Soil	MKGSILDRLVAAGRGHRSVALATDLATGRQLLLDGDRGEGDLVLDEAALGAMREA
Ga0182040_100260431	3300016387	Soil	MKGRILDAVISAGRESRSVALATNLATGRQVLVDGASAEGE
Ga0182040_111713163	3300016387	Soil	MKGRTLDRLVAAEREHRSVALATDLATGRQLLLDGEHAEGDLALDD
Ga0182037_100826951	3300016404	Soil	MKGRVLDAVIAAGHETRSIALATDLATGRQLLLDGEHAE
Ga0182039_100435825	3300016422	Soil	MKGRILDHVVAAARDHRSVALATDLATGRQLLLDGDQVEGDLALDDPALDRVREAW
Ga0182039_102797121	3300016422	Soil	MKGRILDRVVAAEREHRSVALATDLATGWQLLLEGEHVEGDLVLDDT
Ga0182039_110836113	3300016422	Soil	MKGRILDHVVTAARDHRSVALATDLATGKQLLLDGEQ
Ga0187802_100685293	3300017822	Freshwater Sediment	MKGRILDAVIAAGRESRSVALATDLATGRQLLVDDG
Ga0187802_103336102	3300017822	Freshwater Sediment	MKGRILDRVVAAEREHRSVALATNLATGRQLLLDGEHAEG
Ga0187807_12596271	3300017926	Freshwater Sediment	MKGAILDRVVAAARAHRSVALATDLASGRQLLLDAAAAEGD
Ga0187783_103003001	3300017970	Tropical Peatland	MKGRTLDHVVAAARDHRSVALATDLTTGRQLLLDG
Ga0066667_114997773	3300018433	Grasslands Soil	MKGRILDRVVAAARDHRSVAVATDLATGRQLLLDGEQAEGDLAL
Ga0066669_122288622	3300018482	Grasslands Soil	MKGRILDRVVAAARDHRSVAVATDLATGRQLLLDGEQPEGDLALDDT
Ga0179592_101748743	3300020199	Vadose Zone Soil	MKGRILDHLVAAEREHRSVALATDLATGRQLLLDREQAEGDLALDTA
Ga0210399_101389571	3300020581	Soil	MKGRILDHVVAAARDHRSVALATDLTAGRQLLLDGDQVDGDLALDVAALDKVRETW
Ga0210401_102880813	3300020583	Soil	MKGRILDQVLAAEREHRSVALATDLATGRQLLFEGEHAEGDLALD
Ga0179584_11967213	3300021151	Vadose Zone Soil	MKGRILDRVVAAKREHRSVALATDLATGRQLLIEGEHAEGDLALD
Ga0210408_110447172	3300021178	Soil	MKGRILDHLVAAEREHRSVALATDLATGRQLLLDREQAEG
Ga0210396_103756333	3300021180	Soil	MKGRILDRIVAAEREHRSVALATDLATGRQLLFEGEH
Ga0210388_105523841	3300021181	Soil	MKGRILDRIVAAEREHRSVALATDLATGRQLLFEGEHAE
Ga0213874_103500311	3300021377	Plant Roots	MKGRILDRVVAAEREHRSVALATDLATGRQLLFEGDDAEGDLTLDDAAL
Ga0210393_110349573	3300021401	Soil	MKGRILDQVLAAEREHRSVALATDLATGRQMLLDGEH
Ga0210384_100540286	3300021432	Soil	MKGRILDHLVAAEREHRSVALATDLATGRQLLLDREQAEGDLALDT
Ga0210392_103352093	3300021475	Soil	MKGRILDQVLAAEREHRSVALATDLATGRQLLFEGEHAE
Ga0242659_10012565	3300022522	Soil	MKGRILDHVVAAARDHRSLALATNLATGRQLLLDGDHAEGDLTLE
Ga0242662_102114641	3300022533	Soil	MKGRTLDHVVAAARDHRSVALATDLAAGRQLLLDGEHAEGDLAIVGAALDMVREVWR
Ga0242662_102894751	3300022533	Soil	MKRGILDRLVGAGRGHRSAALATELATGRQLLLDGDR
Ga0242670_10180631	3300022708	Soil	MKGRILDQVLAAEREHRSVALATDLATGRQLLFEGEHAEGDLALDDAAFDRVR
Ga0222756_10069291	3300022709	Soil	MKSRILDHVVAAARDHRSLALATNLATGRQLLLDGDHAEGDLTLEDAALVRVREAW
Ga0242677_10587222	3300022713	Soil	MKGRILDRVVAAEREHRSVALATDLATGRQLLFEGVHAEGDLALDDAALDRVRE
Ga0242673_10844923	3300022716	Soil	MKSRILDHVVAAARDHRSLALATNLATGRQLLLDGDHAEGDLTLEDA
Ga0207692_111575101	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKGRILDQVLAAEREHRSVALATDLATGRQLLFEGEHAEGDLALDDAA
Ga0207685_105536761	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MKGRTLDRVVSAEREHRSVALATDLATGRQLLLEGEHAEGDLTLDDAALNRVREAW
Ga0207693_106554323	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKGRILDRVVAAEREHRSVALATDLATGRQLLFEGE
Ga0207693_108091713	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKGRILDRVVAAEREHRSVALATDLATGRQLLFEGEHAEGDLALDDAAL
Ga0257162_10468481	3300026340	Soil	MKGRILDRVVAAERDHRSVALATDLATGRQLLFEGEHAEGDLALDDAALD
Ga0257159_11003501	3300026494	Soil	MKGRILDQVLAAEREHRSVALATDLATGRQLLFEGEHAEGGLTLDDAALDRVREAW
Ga0257156_10251953	3300026498	Soil	MKGRILDRVVAAERDHRSVALATDLATGRQLLFEGEHAEGDLALDDAALDRVRQAW
Ga0257161_10041501	3300026508	Soil	MKGRILDQVLAAEREHRSVALATDLATGRQLLFEGEHAEGDLALDDAAL
Ga0208365_10286653	3300027070	Forest Soil	MRGRTLDHVVGAVRDHRSVALATDLKTGQQLLLDGRN
Ga0209524_10842843	3300027521	Forest Soil	MKGRILDQVLAAEREHRSVALATDLATGRQLLFEGEHAEGDLA
Ga0209447_100437871	3300027701	Bog Forest Soil	MKGRTLDHVVAAARDHRSVALATDLATGRQLLLDGDQ
Ga0307482_12020601	3300030730	Hardwood Forest Soil	MKGRMLDQVVAAARDHRSVALATDLAAGRQLLLDGEHAEGDLAIDGAALDKVRE
Ga0265462_120618783	3300030738	Soil	MKGRILDRVVAAEREHRSVALATNLATGRQLLLDAEQAEG
Ga0170820_103870972	3300031446	Forest Soil	MKGRVLDAVIAAGRESRSVALATDLATGRQLLVDDGAAEGELVRTKKNK
Ga0170819_138371961	3300031469	Forest Soil	MKGRTLDRVVAAARDHRSVALATDLTAGRQLLLDGEQVEGDLALDGAALDKVRE
Ga0170818_1077181123	3300031474	Forest Soil	MKGRTLDAVIAAGRESRSLALATDLATGRQLLVDEDK
Ga0318534_100771101	3300031544	Soil	MKGRMLDHVVAAARDHRSVALATDLAAGQQLLLDGEHAEGDLALDGAALDMVRDVW
Ga0318528_102130293	3300031561	Soil	MKGRTLDHVVAAARDHRSVALATDLGTGRQLLLDGDRVEGDLAIDDQ
Ga0318528_107707111	3300031561	Soil	MKGRTLDHVVAAARDHRSVALATDLTTGRQLLLDGEQAEGDL
Ga0318515_105491631	3300031572	Soil	MKGRILDRVVAAEREHRSVALATDLATGRQLLLDGEHAEGDLALPD
Ga0318542_100094606	3300031668	Soil	MKGRILDHVVAAARDHRSVALATDLASGRQLLLDAEQVEGDLALDDP
Ga0318542_107413861	3300031668	Soil	MKGRTLDHVVAAARDHRSVALATDLATGRQLLLDGEQAEGDLALED
Ga0318574_100155781	3300031680	Soil	MKGRILDRVVAAEREHRSIALATDLATGRQLLLDGEHAEGDLALPD
Ga0318574_103474713	3300031680	Soil	MKGRILDHVVAAARDHRSVALATDLTAGWQLLFDGDQVE
Ga0318496_105447251	3300031713	Soil	MKGRILDRVVAAEREHRSVALATDLATGRQLLLDGEHAEGD
Ga0307469_118413041	3300031720	Hardwood Forest Soil	MKGRVLDAVVAAGRESRSLALATDLATGRQLLVDDDAAEGELALDPAAL
Ga0318500_103887483	3300031724	Soil	MKGRTLDRLVAAEREHRSVALATDLATGRQLLLDGEHAEGDLALDDAVLD
Ga0318501_107844201	3300031736	Soil	MKGRMLDHVVAAARDHRSVALATDLAVGRQLLLDGEQAEGDL
Ga0318502_108760043	3300031747	Soil	MKGRMLDHVVAAARDHRSVALATDLAAGRQLLLDGEHAEGELTIDGAALDM
Ga0318494_108077342	3300031751	Soil	MKGRILDRVVAAEREHRSVALATDLATGRQLLLDGEHAEGDLALPDAVLD
Ga0318537_103011421	3300031763	Soil	MKGRTLDHVVAAARDHRSVALATDLTTGRQLLLDGEQAEGDLALDGAA
Ga0318535_104441301	3300031764	Soil	MKGRILDAVISAGRESRSVALATNLATGRQALVDGASAE
Ga0318543_100633011	3300031777	Soil	MKGRILDHVVAAARDHRSVALATDLTTGRQLLLDGEQVE
Ga0318566_103325093	3300031779	Soil	MKGRILDRVVAAEREHRSVALATDLATGWQLLLEGEHVEGDLVLDDTA
Ga0318508_12585911	3300031780	Soil	MKGRILDRVVAAERDHRSVALATELASGRQLLLDGEQPE
Ga0318547_100769931	3300031781	Soil	MKGRMLDQVVAAARDHRSVALATDLAAGRQLLLDGEHAEGELTIDGAALD
Ga0318548_101015073	3300031793	Soil	MKGRILDRVVAAGRDHRSVALATDLASGRQLLLDGEQPEGDLTLDDGALEK
Ga0318548_103747021	3300031793	Soil	MKGRILDHVVTAARDHRSVALATDLATGKQLLLDGEQVEGDLAL
Ga0318576_103828101	3300031796	Soil	MKGRILDAVISAGGESRSVALATNLATGRQVLVDGASAEGELA
Ga0318576_105763671	3300031796	Soil	MKGRILDRVVAAEREHRSVVLATDLATGRQLLLEGEHEEGDLALDAAVLD
Ga0318523_104953321	3300031798	Soil	MKGRILDHVVTAARDHRSVALATDLATGKQLLLDDDQVEGDLALDGATFD
Ga0318565_100391091	3300031799	Soil	MKGRMLDHVVAAARDHRSVALATDLAVGRQLLLDGEQAEGDLALDGAALDM
Ga0318568_110009741	3300031819	Soil	MKGRILDHVVTAARDHRSVALATDLATGKQLLLDDD
Ga0318499_102075253	3300031832	Soil	MKGRILDRVVAAEREHRSIALATDLATGRQLLLDGEHAEGDLALPDAVLSL
Ga0318499_102501101	3300031832	Soil	MKGRILDHVVTAARDHRSVALATDLATGKQLLLDGEQIEGDLTLDDTM
Ga0318512_101324113	3300031846	Soil	MKGRVLDAVIAAGHETRSIALATDLATGRQLLVDD
Ga0318527_100350541	3300031859	Soil	MKGRMLDQVVAAARDHRSVALATDLAAGRQLLLDGEHAEGELTIDGAALDMVREVW
Ga0318536_106393353	3300031893	Soil	MKGRILDHVVTAARDHRSVALATDLATGKQLLLDDDQVEG
Ga0318520_100112591	3300031897	Soil	MKRRILDRVVAAEREHRSVALATDLATGRQLVLDGEHAEGDLALDDGVLDR
Ga0318520_102722501	3300031897	Soil	MKGRILDRVVAAERDHRSVALATELASGRQLLLDGEQPEGDLTLDDGALEKVREVWRTG
Ga0318520_103055423	3300031897	Soil	MKGRILDRVVAAEREHRSVALATDLATGWQLLLEGEHVEGDLVLDDTAIEKVRE
Ga0306921_115564541	3300031912	Soil	MKGRILDRVVAAEREHRSVALATELATGRQLLLESEHAEGDLALDDAALD
Ga0310916_103298173	3300031942	Soil	MKGRILDHVVAAARDHRSVALATDLATGRQLLLDGEQVEGD
Ga0310916_117459082	3300031942	Soil	MKGRILDRVAAAGRDHRSVALATDLASGRQLLLDGEQPEGDLTLDDGALEKVREV
Ga0310913_105200721	3300031945	Soil	MKGRILDHVVAAARDHRSVALATDLATGRQLLLDGDQVEGDLALDD
Ga0310913_105860983	3300031945	Soil	MKGRILDHVVTAARDHRSVALATDLATGKQLLLDGEQIEGDLTLDDTMLDRV
Ga0310910_100450295	3300031946	Soil	MKGRILDRVVAAERDHRSVALATELASGRQLLLDGEQPEGDLTLDDGALEKVREVW
Ga0310909_105488911	3300031947	Soil	MKGRILDRVAAAGRDHRSVALATDLASGRQLLLDGEQPEGDLTL
Ga0306926_114704941	3300031954	Soil	MKGRTLDHVVAAARDHRSVALATDLGTGRQLLLDGDRVEGDL
Ga0318531_103955183	3300031981	Soil	MKGRILDRIVAAEREHRSVALATDLATGRQMLFEGEQAEGDLTLEHAALERVR
Ga0306922_117301293	3300032001	Soil	MKGRILDHVVAAARDHRSVALATDLTAGWQLLFDGD
Ga0306922_119287201	3300032001	Soil	MKGRILDRVVAAESEHRSVALATDLATGRQLLFEGEQVDGDLTLDDVALDTVREVW
Ga0306922_123764001	3300032001	Soil	MKGRILDHVVTAARDHRSVALATDLATGKQLLLDGE
Ga0318569_104852051	3300032010	Soil	MKGRILDHVVAAARDHRSVALATDLTAGWQLLFDGDQVEGDLALDGAALDKVRETWRS
Ga0318507_102765901	3300032025	Soil	MKGRMLDHVVAAARDHRSVALATDLAAGRQLLLDGEHAE
Ga0310911_107449853	3300032035	Soil	MKGRILDHVVTAARDHRSVALATDLATGKQLLLDGEQVEGDLALDGATFDKV
Ga0318559_102804373	3300032039	Soil	MKGRMLDHVVAAARDHRSVALATDLAAGRQLLLDGEHAEGELTIDGAALDMVRE
Ga0318545_101115601	3300032042	Soil	MKGRILDRIVAAEREHRSVALATDLATGRQMLFEGEQAEGDLTLEHA
Ga0318545_101799001	3300032042	Soil	MKGRTLDRLVAAEREHRSVALATDLATGRQLLLDGEHAEGDLA
Ga0318556_104094521	3300032043	Soil	MKGRILDQVVAAEREHRSVALATDLATGSQLLFEGEHAEGDLTLDDAALDRV
Ga0318558_103286213	3300032044	Soil	MKGRTLDHVVAAARDHRSVALATDLGTGRQLLLDGDRVEGDLAIDDQTLDRL
Ga0318558_106768482	3300032044	Soil	MKGRILDRVVAAEREHRSVALATDLATGRQLLLEGKHVEGDLVLDD
Ga0318533_100880391	3300032059	Soil	MKGRTLDHVVAAARDHRSVALATDLATGRQLLLDGEQ
Ga0318504_105196001	3300032063	Soil	MKGRTLDRLVAAEREHRSVALATDLATGRQLLLDG
Ga0318510_101189623	3300032064	Soil	MKGRMLDHVVAAARDHRSVALATDLAAGRQLLLDGEHAEGELTIDGAALD
Ga0318514_107640161	3300032066	Soil	MKGRILDHVVAAARDHRSVALATDLATGRQLLLDGEQVE
Ga0306924_111379463	3300032076	Soil	MKGRILDHVVAAARDHRSVALATDLATGRQLLLDGDQVEGDLALDDPALDRV
Ga0306924_117633831	3300032076	Soil	MKGRILDRVVAAEREHRSVALATDLATGRQLLLEGEH
Ga0318577_104677221	3300032091	Soil	MKGRILDRVVAAEREHRSIALATDLATGRQLLLDGE
Ga0307472_1003950393	3300032205	Hardwood Forest Soil	MKGRILDHVVAAARDHRSVALATDLTTGFQALLDGQQVEGDLELDEIALDRVREV
Ga0306920_1033802162	3300032261	Soil	MKGRILDRVVAAESEHRSVALATDLATGRQLLFEGEQVDGDLTLDDVAL
Ga0310914_106808431	3300033289	Soil	MKGRILDRVLAAEREHRSVALATDLASGRQLLFDGEH
Ga0310914_113761033	3300033289	Soil	MKGRTLDHVVAAARDHRSVALATDLATGRQLLLDGEQAEGDLALEDS
Ga0318519_109613401	3300033290	Soil	MKGRTLDHVVAAARDHRSVALATNLTTGRQLLLDGDQVEGDLALDDAALDTVRG

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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