Metagenome / Metatranscriptome Family F046488

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F046488
Family Type	Metagenome / Metatranscriptome
Number of Sequences	151
Average Sequence Length	58 residues
Representative Sequence	LLADWAVQPFWPKCASLALVIGTGAAAFFLCANALGIAEVHDIAAALRRRLRRAAG
Number of Associated Samples	128
Number of Associated Scaffolds	151

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.67 %
% of genes near scaffold ends (potentially truncated)	98.68 %
% of genes from short scaffolds (< 2000 bps)	84.11 %
Associated GOLD sequencing projects	121
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (84.106 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.086 % of family members)
Environment Ontology (ENVO)	Unclassified (37.748 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.642 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.95% β-sheet: 0.00% Coil/Unstructured: 44.05%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 151 Family Scaffolds
PF05013	FGase	56.95
PF13505	OMP_b-brl	13.25
PF01979	Amidohydro_1	7.95
PF07837	FTCD_N	7.95
PF02554	CstA	0.66
PF01370	Epimerase	0.66
PF02441	Flavoprotein	0.66

COG ID	Name	Functional Category	% Frequency in 151 Family Scaffolds
COG3741	N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	56.95
COG3931	Predicted N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	56.95
COG3643	Glutamate formiminotransferase	Amino acid transport and metabolism [E]	7.95
COG1966	Carbon starvation protein CstA (peptide/pyruvate transporter)	Energy production and conversion [C]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.11 %
Unclassified	root	N/A	15.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.11 %
Unclassified	root	N/A	15.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.11 %
Unclassified	root	N/A	15.89 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	69.54 %
Unclassified	root	N/A	15.89 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.66 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.66 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	40.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.19 %
Unclassified	root	N/A	15.89 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	21.85 %
Unclassified	root	N/A	15.89 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	5.30 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	21.85 %
Unclassified	root	N/A	15.89 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	5.30 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.66 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	21.85 %
Unclassified	root	N/A	15.89 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	5.30 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.66 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	21.85 %
Unclassified	root	N/A	15.89 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	5.30 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.66 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	21.85 %
Unclassified	root	N/A	15.89 %
Sphingomonas sp. dw_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. dw_22	5.30 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.66 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.66 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_10928266	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300005166\|Ga0066674_10149347	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300005187\|Ga0066675_10481709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	926	Open in IMG/M
3300005332\|Ga0066388_104022039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	750	Open in IMG/M
3300005363\|Ga0008090_14729636	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300005440\|Ga0070705_101578038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	552	Open in IMG/M
3300005450\|Ga0066682_10492571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	777	Open in IMG/M
3300005451\|Ga0066681_10168879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1295	Open in IMG/M
3300005541\|Ga0070733_10849637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	613	Open in IMG/M
3300005546\|Ga0070696_101074448	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300005548\|Ga0070665_101311761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	734	Open in IMG/M
3300005554\|Ga0066661_10510339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	725	Open in IMG/M
3300005560\|Ga0066670_10048119	All Organisms → cellular organisms → Bacteria → Proteobacteria	2196	Open in IMG/M
3300005561\|Ga0066699_10745622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	694	Open in IMG/M
3300005591\|Ga0070761_10018745	All Organisms → cellular organisms → Bacteria → Proteobacteria	3842	Open in IMG/M
3300005617\|Ga0068859_102689752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	547	Open in IMG/M
3300005921\|Ga0070766_10081171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. dw_22	1888	Open in IMG/M
3300006176\|Ga0070765_101369138	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300006358\|Ga0068871_101115558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	738	Open in IMG/M
3300006578\|Ga0074059_11889286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. dw_22	1062	Open in IMG/M
3300006603\|Ga0074064_11770289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	672	Open in IMG/M
3300006852\|Ga0075433_10800080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	824	Open in IMG/M
3300006871\|Ga0075434_100858058	Not Available	923	Open in IMG/M
3300006903\|Ga0075426_10720237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	749	Open in IMG/M
3300009545\|Ga0105237_10118662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. dw_22	2639	Open in IMG/M
3300010048\|Ga0126373_12287854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	601	Open in IMG/M
3300010048\|Ga0126373_12423441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	584	Open in IMG/M
3300010049\|Ga0123356_11695316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	784	Open in IMG/M
3300010303\|Ga0134082_10240973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	748	Open in IMG/M
3300010321\|Ga0134067_10014795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2277	Open in IMG/M
3300010359\|Ga0126376_11174112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	781	Open in IMG/M
3300010376\|Ga0126381_100795042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1358	Open in IMG/M
3300010376\|Ga0126381_101656442	Not Available	924	Open in IMG/M
3300010376\|Ga0126381_104526586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	536	Open in IMG/M
3300011106\|Ga0151489_1026238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	571	Open in IMG/M
3300012206\|Ga0137380_10602707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	960	Open in IMG/M
3300012285\|Ga0137370_10722886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	618	Open in IMG/M
3300012285\|Ga0137370_10790886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	588	Open in IMG/M
3300012683\|Ga0137398_10043999	All Organisms → cellular organisms → Bacteria → Proteobacteria	2612	Open in IMG/M
3300012917\|Ga0137395_11133820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	552	Open in IMG/M
3300012927\|Ga0137416_11823007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	556	Open in IMG/M
3300012929\|Ga0137404_10349471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1294	Open in IMG/M
3300012971\|Ga0126369_11739684	Not Available	712	Open in IMG/M
3300012977\|Ga0134087_10638523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	556	Open in IMG/M
3300012988\|Ga0164306_10153604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1572	Open in IMG/M
3300012989\|Ga0164305_10042570	All Organisms → cellular organisms → Bacteria → Proteobacteria	2596	Open in IMG/M
3300014501\|Ga0182024_10117218	All Organisms → cellular organisms → Bacteria → Proteobacteria	3822	Open in IMG/M
3300015357\|Ga0134072_10347171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	568	Open in IMG/M
3300016270\|Ga0182036_10461671	Not Available	1000	Open in IMG/M
3300016270\|Ga0182036_11742993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	526	Open in IMG/M
3300016294\|Ga0182041_10075228	All Organisms → cellular organisms → Bacteria	2392	Open in IMG/M
3300016294\|Ga0182041_11889123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	555	Open in IMG/M
3300016341\|Ga0182035_11107374	Not Available	705	Open in IMG/M
3300016371\|Ga0182034_10898233	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300016371\|Ga0182034_11915891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	523	Open in IMG/M
3300016387\|Ga0182040_10747496	Not Available	803	Open in IMG/M
3300016387\|Ga0182040_11350809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	602	Open in IMG/M
3300016404\|Ga0182037_10515407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. dw_22	1005	Open in IMG/M
3300016445\|Ga0182038_10448441	Not Available	1092	Open in IMG/M
3300017959\|Ga0187779_11031987	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300017973\|Ga0187780_10109460	All Organisms → cellular organisms → Bacteria → Proteobacteria	1905	Open in IMG/M
3300017974\|Ga0187777_10226451	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300018058\|Ga0187766_10038145	All Organisms → cellular organisms → Bacteria → Proteobacteria	2805	Open in IMG/M
3300018062\|Ga0187784_10609495	Not Available	877	Open in IMG/M
3300018085\|Ga0187772_10810677	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300020582\|Ga0210395_10704123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	755	Open in IMG/M
3300020583\|Ga0210401_10165899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2061	Open in IMG/M
3300021180\|Ga0210396_10687899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	884	Open in IMG/M
3300021402\|Ga0210385_10106230	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300021402\|Ga0210385_10489001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	932	Open in IMG/M
3300021402\|Ga0210385_11290987	Not Available	559	Open in IMG/M
3300021403\|Ga0210397_10600552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	841	Open in IMG/M
3300021403\|Ga0210397_11175890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	596	Open in IMG/M
3300021406\|Ga0210386_10134496	All Organisms → cellular organisms → Bacteria	2056	Open in IMG/M
3300021433\|Ga0210391_11181668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	593	Open in IMG/M
3300021444\|Ga0213878_10386605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	608	Open in IMG/M
3300021474\|Ga0210390_10042215	All Organisms → cellular organisms → Bacteria	3731	Open in IMG/M
3300021474\|Ga0210390_10055713	All Organisms → cellular organisms → Bacteria → Proteobacteria	3254	Open in IMG/M
3300021474\|Ga0210390_10559047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	961	Open in IMG/M
3300021477\|Ga0210398_10243409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1465	Open in IMG/M
3300021477\|Ga0210398_10681129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	832	Open in IMG/M
3300021559\|Ga0210409_10904929	Not Available	756	Open in IMG/M
3300021560\|Ga0126371_11732387	Not Available	748	Open in IMG/M
3300025914\|Ga0207671_11089689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	628	Open in IMG/M
3300025941\|Ga0207711_11858274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	545	Open in IMG/M
3300026078\|Ga0207702_10204440	All Organisms → cellular organisms → Bacteria	1833	Open in IMG/M
3300026333\|Ga0209158_1302984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	550	Open in IMG/M
3300026529\|Ga0209806_1043638	All Organisms → cellular organisms → Bacteria → Proteobacteria	2147	Open in IMG/M
3300027376\|Ga0209004_1075805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	569	Open in IMG/M
3300027879\|Ga0209169_10628644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	560	Open in IMG/M
3300027889\|Ga0209380_10096536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1706	Open in IMG/M
3300028047\|Ga0209526_10079793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2305	Open in IMG/M
3300028773\|Ga0302234_10495109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	523	Open in IMG/M
3300031231\|Ga0170824_115382997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	901	Open in IMG/M
3300031543\|Ga0318516_10115732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1525	Open in IMG/M
3300031545\|Ga0318541_10836284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	514	Open in IMG/M
3300031546\|Ga0318538_10564354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	617	Open in IMG/M
3300031573\|Ga0310915_10062955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2425	Open in IMG/M
3300031668\|Ga0318542_10316458	Not Available	800	Open in IMG/M
3300031679\|Ga0318561_10116237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1418	Open in IMG/M
3300031681\|Ga0318572_10030579	All Organisms → cellular organisms → Bacteria	2797	Open in IMG/M
3300031708\|Ga0310686_100842610	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300031708\|Ga0310686_110338382	All Organisms → cellular organisms → Bacteria → Proteobacteria	2486	Open in IMG/M
3300031720\|Ga0307469_12327931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	522	Open in IMG/M
3300031751\|Ga0318494_10057602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2068	Open in IMG/M
3300031754\|Ga0307475_10178744	All Organisms → cellular organisms → Bacteria	1693	Open in IMG/M
3300031754\|Ga0307475_10211584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1551	Open in IMG/M
3300031764\|Ga0318535_10073220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1468	Open in IMG/M
3300031764\|Ga0318535_10191352	Not Available	915	Open in IMG/M
3300031764\|Ga0318535_10340629	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300031770\|Ga0318521_10118650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1476	Open in IMG/M
3300031771\|Ga0318546_10415176	Not Available	941	Open in IMG/M
3300031777\|Ga0318543_10119035	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300031778\|Ga0318498_10152225	Not Available	1053	Open in IMG/M
3300031782\|Ga0318552_10546969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	591	Open in IMG/M
3300031794\|Ga0318503_10053785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1230	Open in IMG/M
3300031796\|Ga0318576_10341768	Not Available	707	Open in IMG/M
3300031819\|Ga0318568_10893867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	550	Open in IMG/M
3300031821\|Ga0318567_10175722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1191	Open in IMG/M
3300031821\|Ga0318567_10866921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	511	Open in IMG/M
3300031823\|Ga0307478_10454882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1065	Open in IMG/M
3300031835\|Ga0318517_10126502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. dw_22	1133	Open in IMG/M
3300031879\|Ga0306919_11272981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	557	Open in IMG/M
3300031890\|Ga0306925_10789129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. dw_22	987	Open in IMG/M
3300031941\|Ga0310912_10122686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1937	Open in IMG/M
3300031942\|Ga0310916_10388435	Not Available	1187	Open in IMG/M
3300031945\|Ga0310913_10839801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	647	Open in IMG/M
3300031947\|Ga0310909_10151478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1907	Open in IMG/M
3300031954\|Ga0306926_10901011	Not Available	1059	Open in IMG/M
3300031962\|Ga0307479_10476832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1231	Open in IMG/M
3300031962\|Ga0307479_11123993	Not Available	751	Open in IMG/M
3300031981\|Ga0318531_10463699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	574	Open in IMG/M
3300032001\|Ga0306922_10467547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1346	Open in IMG/M
3300032001\|Ga0306922_10854263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. dw_22	948	Open in IMG/M
3300032008\|Ga0318562_10196874	Not Available	1167	Open in IMG/M
3300032009\|Ga0318563_10732646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	530	Open in IMG/M
3300032042\|Ga0318545_10123182	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300032044\|Ga0318558_10068816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1606	Open in IMG/M
3300032044\|Ga0318558_10122589	All Organisms → cellular organisms → Bacteria	1233	Open in IMG/M
3300032044\|Ga0318558_10626637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	537	Open in IMG/M
3300032052\|Ga0318506_10126680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. dw_22	1107	Open in IMG/M
3300032054\|Ga0318570_10502792	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	553	Open in IMG/M
3300032059\|Ga0318533_10097860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2027	Open in IMG/M
3300032063\|Ga0318504_10032906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2074	Open in IMG/M
3300032064\|Ga0318510_10356595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	617	Open in IMG/M
3300032261\|Ga0306920_101677264	Not Available	901	Open in IMG/M
3300032805\|Ga0335078_11278956	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300032893\|Ga0335069_10097868	All Organisms → cellular organisms → Bacteria → Proteobacteria	3711	Open in IMG/M
3300033289\|Ga0310914_10441796	Not Available	1177	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.72%
Host-Associated	Host-Associated	7.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.05%
Plants	Host-Associated → Plants	6.62%
Aquatic	Environmental → Aquatic	0.66%
Arthropoda	Host-Associated → Arthropoda	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.32%
Freshwater	Environmental → Aquatic → Freshwater	0.66%
Peat	Environmental → Terrestrial → Peat	0.66%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.66%
Roots	Host-Associated → Plants → Roots	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.81%
Loam	Environmental → Terrestrial → Soil → Loam	6.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.32%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.66%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.66%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.66%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.66%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.30%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.32%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.66%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.66%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.66%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.66%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.64%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.99%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.32%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.32%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.66%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.66%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.66%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.66%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.66%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.66%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.66%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.66%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_109282662	3300004080	Bog Forest Soil	GGHYLLGDWATQPFWPKCLSLLGVIVASAGAFFLCANVLGIREVHDLVAAVRRRLKRSR*
Ga0066674_101493471	3300005166	Soil	WPKCVSLILVIGSAAGAFFLCANALGIGEVHEIVRAVRRRVRRAA*
Ga0066675_104817091	3300005187	Soil	LLADWAVQRFWPKCVSLLLVIGSGAGAFFLCANALGIGEVHEIVRAVRRRVRRRSG*
Ga0066388_1040220391	3300005332	Tropical Forest Soil	CWAGAHLLLADWAVQPFWPKCFSLLLVIVTAAAAFFLTASALGIPEVHDIVAAVRRRLRR
Ga0008090_147296362	3300005363	Tropical Rainforest Soil	HYLLSDWAVQPFWPKFASLTLVILTAAAAFFLCAGALGIDEVHDIAAALRRRLRRAASGPG*
Ga0070705_1015780382	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VQAFWPKCASLVLVIGTSAAAFFLLASLLRIGEVHEITAAVRRRLRRRAA*
Ga0066682_104925712	3300005450	Soil	FWPKCVSLLLVIGSGAGAFFLCANALGIGEVHEIARAMRRRLHRAA*
Ga0066681_101688791	3300005451	Soil	LLADWAVQRFWPKCVSLLLVIGSAAGAFFLCANALGIGDVDEIVRAVRRRFSRAA*
Ga0070733_108496372	3300005541	Surface Soil	LLAVSWAGAHYLLENWASQPFWPKCASLVLVIAVSGAGFFLCANALRIVEVHDIVQAVRRRLQRRR*
Ga0070696_1010744481	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	GCTAQSGAHLLLADWAVQPFGPKAASLLLVIAAGAAAFFLCAHALRIGEVRDIFAAVGRRLRRAGNK*
Ga0070665_1013117611	3300005548	Switchgrass Rhizosphere	WAGGHYLLGGWATQAFWPKCASLTLVIAVAGAAFFFVANALKIAEVHDIVAAVRRRLTRQR*
Ga0066661_105103392	3300005554	Soil	GAHFLLADWAVQSFWPKCLSLVLVIVLAAAAFFVSASALGIGEVHEIARAVQRRLRRAG*
Ga0066670_100481194	3300005560	Soil	RFWPKCVSLLLVIGSGAGAFFLCANALGIGEVHEIARAMRRRLHRAA*
Ga0066699_107456221	3300005561	Soil	LLADWAVQSFWPKCLSLVLVIVLAAAAFFVSASALGIGEVHEIARAVQRRLRRAG*
Ga0070761_100187451	3300005591	Soil	HFLLADWAVQAFWPKLVSLLLVISVGAAAFFFTASALGISEVHDITRAVRRRLQRRV*
Ga0068859_1026897521	3300005617	Switchgrass Rhizosphere	LGGWATQAFWPKCASLTLVIAVAGAAFFFVANALKITEVHDIVAAVRRRLARQR*
Ga0070766_100811714	3300005921	Soil	KCLSLALVIASGAAAFFFCAHALGIGEVHEIVRAVRRRLRRAT*
Ga0070765_1013691381	3300006176	Soil	WAGGHYLLAGWATQAFWPKCLSLAGVIAVSAGAFFLCANALGIREVHDLVAAVRRRLARRR*
Ga0068871_1011155582	3300006358	Miscanthus Rhizosphere	GGRLLLADWAVQAFWPKCASLVLVIGTSAAAFFLLASLLGIGEVHEITAAVRRRLRRRAA
Ga0074059_118892861	3300006578	Soil	YLLGGWATQAFWPKCASLTLVIAVAGAAFFFVANALKIAEVHDIVAAVRRRLARQR*
Ga0074064_117702892	3300006603	Soil	LVLLTISWAGGHYLLGGWATQAFWPKCASLTLVIAVAGAAFFFVANALKITEVHDIVAAVRRRLARQR*
Ga0075433_108000801	3300006852	Populus Rhizosphere	GNYLLLADWAVQPFWPKCAGLTLIIATAAAAFFLCASALNIGEVHDIMAALRRRLRGAPR
Ga0075434_1008580582	3300006871	Populus Rhizosphere	ALFATCWGGNRLLLADWAVQPFWPKCAGLTLIIATAAAAFFLCASALNIGEVHDIMAALRRRLRGAPR*
Ga0075426_107202372	3300006903	Populus Rhizosphere	SLVLLAIAWAGGHYLLGGWATQAFWPKCASLTLVIAVAGAAFFFVANALKITEVHDIVAAVRRRLTRQR*
Ga0105237_101186621	3300009545	Corn Rhizosphere	LVLLAISWAGGHYLLGGWATQAFWPKCASLTLVIAVAGAAFFFVANALKITEVHDIVAAVRRRLTRQR*
Ga0126373_122878541	3300010048	Tropical Forest Soil	AALFAVAWAGDHFLLADWEVQLFWPKFASLVLVIATAAGAFFLCASALGISEVHDIAAALRRRLRRAASGPNG*
Ga0126373_124234411	3300010048	Tropical Forest Soil	LAVCAAGLQYLLADWAVQAFWPKAASLTLVIAVAAAVFFLIANALGVSEVHDIVAAVRRRLARRGS*
Ga0123356_116953161	3300010049	Termite Gut	WAGAHYLLVDWAVQPFWPKFARLGLVITVAAAAFCVCASVLGIGEVDDLVAAVRRRLRR*
Ga0134082_102409732	3300010303	Grasslands Soil	VQRFWPKCVSLLLVIGSAAGAFFLCANALGIGDVDEIVRAVRRRFSRAA*
Ga0134067_100147953	3300010321	Grasslands Soil	QSFWPKCLSLVLVIVLAAAAFFVTASALGIGEVHEIARAVQRRLRRAG*
Ga0126376_111741122	3300010359	Tropical Forest Soil	VLLGLCAAGGHWLLSEWATQAFWPKSLSLLLVIAVGAAGFFASASALGITEVHEISAALRRRLQRR*
Ga0126381_1007950423	3300010376	Tropical Forest Soil	SDWAVQPFWPKLASLILVIVTAAAAFFLCASALGIDEVHDIAAALRRRLRRAASGPS*
Ga0126381_1016564422	3300010376	Tropical Forest Soil	SWAGLHYLLADWAVQPFWPKCARLILVISTAAAAFFVCASALGIGEVHDITAALGRRLRRAAPGSSG*
Ga0126381_1045265861	3300010376	Tropical Forest Soil	LLADWAVQPFWPKFASLTLVIMTAAAAFFLCASALGIEEVHDITAALRRRLRRAVSG*
Ga0151489_10262382	3300011106	Soil	QAFWPKCASLTLVIAVAGAAFFFVANALKITEVHDIVAAVRRRLARQR*
Ga0137380_106027071	3300012206	Vadose Zone Soil	AVQSFWPKCLSLALVIVLAAAAFFVSASALGVGEVHEIARAVQRRLRRAG*
Ga0137370_107228861	3300012285	Vadose Zone Soil	KCVSLILVIGSAAGAFFLCANALGIGEVDEIVRAVRRRVRRAA*
Ga0137370_107908861	3300012285	Vadose Zone Soil	LADWAVQRFWPKCVSLLLVIGSGAGAFFLCANALGIGEVHEIVRAVRRRVRRRSG*
Ga0137398_100439994	3300012683	Vadose Zone Soil	VLLGICWAGAHFLLADWAVQRFWPKCVSLLLVIGGGGGAFFLCASALGIGEVHEIVRAMRRRLHRVA*
Ga0137395_111338202	3300012917	Vadose Zone Soil	WAVQRFWPKCVSLLLVIGSGAGAFFLCANVLGIGEVHEIVRAMRRRLHRAA*
Ga0137416_118230072	3300012927	Vadose Zone Soil	AHFLLADWAVQRFWPKCVSLLLVIGSGAGAFFLCASALGIGEVHEIVRAMRRRLHRAA*
Ga0137404_103494713	3300012929	Vadose Zone Soil	WAVQRFWPKCVSLLLVIGSGAGAFFLCASALGIGEVHEIVRALRRRLHRAA*
Ga0126369_117396842	3300012971	Tropical Forest Soil	LLADWAIQAFWPKCASLVLVIGMSAAAFFLLASVLGISEVHDIAAAVRRRLRRRAA*
Ga0134087_106385232	3300012977	Grasslands Soil	LLADWAVQRFWPKCVSLLLVIGSGAGAFFLCANALGIGEVHEIARAMRRRLHRAA*
Ga0164306_101536043	3300012988	Soil	LALASLVLLAISWAGGHYLLGGWATQAFWPKCASLTLVIAVAGAAFFFVANALKIAEVHDIVAAVRRRLARQR*
Ga0164305_100425701	3300012989	Soil	LLGGWATQAFWPKCASLTLVIAVAGAAFFFVANALKITEVHDIVAAVRRRLARQR*
Ga0182024_101172185	3300014501	Permafrost	SLLLGISWAGGHFLLADWAVQAFWPKLLSLMLVIAAGAAAFFFAASALGISEVHDITRAVRRRLQRRA*
Ga0134072_103471711	3300015357	Grasslands Soil	RFWPKCVSLLLVIGSGAGAFFLCANALGIGEVDEIVRAVRRRVRRAA*
Ga0182036_104616711	3300016270	Soil	ALLAVSWAGAHYLLSDWAVQPFWPKCASLVLVIGVGAAAFFLCANALGIREVHDIMAGLRRRLRRTA
Ga0182036_117429932	3300016270	Soil	YLLSDWAVQPFWPKFASLTLVILTAAAAFFLCAGALGIDEVHDIVAALRRRLRRATSGPN
Ga0182041_100752283	3300016294	Soil	WAVQPFWPKCASLVLVIGVGAAAFFVCANALGIREVHDIMAGLRRRLRRAR
Ga0182041_118891231	3300016294	Soil	IALLAVCAAGMHYLLADWAVQAFWPKCISLMLVIAVAAAAFFFCANALGISEVHDIVAAARRRLARRGK
Ga0182035_111073742	3300016341	Soil	QPFWPKFASLTLVILTAAAAFFLCAGALGIDEVHDIVAALRRRLRRATSGPNG
Ga0182034_108982332	3300016371	Soil	FAVSWAGAHLLLADWAVQPFWPKCASLVLVIGVGAAAFFVCANALGIREVHDIMAGLRRRLRRAR
Ga0182034_119158912	3300016371	Soil	ASTALLAVSWAGAHYLLADWAVQPFWPKFASLALVIFTAAAAFFLCASALGIEEVHDIAAALRRRLRRAASG
Ga0182040_107474962	3300016387	Soil	VQPFWPKCARLILVIFTSAAAFFLCASALGIGEVHDITAALRRRLRRAAGGSSG
Ga0182040_113508092	3300016387	Soil	ADWAVQPFWPKCASLVLVIGVAAAAFFLCANALGIREVHDIVAGLQRRLRRTA
Ga0182037_105154071	3300016404	Soil	WAGAHYLLVDWAVQPFWQRSARLILVIFTSAAAFFLCASALGIGAVHDITAALRRRLRRAAGGSSG
Ga0182038_104484412	3300016445	Soil	VSWAGAHYLLADWQVQPFWPKSARLILVIFTAAAAFFLCASALGIGEVRDITAALRRRLRRAASGSSG
Ga0187779_110319871	3300017959	Tropical Peatland	QPFWPTCVALLCVIALSGGAFFLCAGLLRIDEVHEIVRAVRRRLERAR
Ga0187780_101094603	3300017973	Tropical Peatland	HWLLADWAVQRFWPKLASLTLVIGCAAVAFFLCASALGISEVQELRQAVRRRLRRAR
Ga0187777_102264512	3300017974	Tropical Peatland	VQPFWPTCVALLCVIALSGGAFFLCAGLLRIGEVHEIVRAVRRRLERAR
Ga0187766_100381454	3300018058	Tropical Peatland	EPFWPKCARLTLVIAAGAAAFFAAAQGLGIAEVREIGRALRRRLERAR
Ga0187784_106094952	3300018062	Tropical Peatland	LADWAVQHFWPKLASLTLVIACAAAAFFLSASALGIGEVQELRGALERRIKRTRNP
Ga0187772_108106772	3300018085	Tropical Peatland	WLLADWAVQRFWPKLASLTLVIGCAAVAFFLCASALGISEVQELRQAVRRRLRRAR
Ga0066669_106785361	3300018482	Grasslands Soil	KCVSLLLVIGSGAGAFFLCANALGIGEVHEIVRAVRRRARRRSG
Ga0210395_107041232	3300020582	Soil	GHFLLADWAVQAFWPKCLSLALVIASGAAAFFFCAHALGIGEVHEIVRAVRRRLRRAT
Ga0210401_101658993	3300020583	Soil	PKCASLVLVIAVSGAGFFLCANALCIVEVQDIAQAVRRRLQRRR
Ga0210396_106878991	3300021180	Soil	LLLADWATQHFWPKLASLTLVIGCAAAAFFLCAAALGIGEVRELKDAVLRRLRRRRNP
Ga0210385_101062303	3300021402	Soil	LLANWAVQAFWPKCMSLLLVIACASAAFFFCAAALGIGEVHDILAALRRRLARRRGPK
Ga0210385_104890012	3300021402	Soil	IAWGGGQLLLGDWATQHFWPKLASLTLVIGCAAAAFFLCAAALGIGEVRELRDAVLRRLRRTRNP
Ga0210385_112909872	3300021402	Soil	LADWASARFWPKCVALAAVISAAAAVFFFCANALGIGEVHDIVAAVRRRLRRAH
Ga0210397_106005521	3300021403	Soil	HYLLSDWATQAFGPKSLSLLLVIAVAGAAFFACANALRIAEVHEIIAALARRLRR
Ga0210397_111758902	3300021403	Soil	LADWAVQAFWPKCLSLTLVIAVGAAGFFLCAAALRIAEVQDLTAALRRRLRRAR
Ga0210386_101344961	3300021406	Soil	ASAALFAVSFVGGRLLLADWAVQPFWPKCASLVLVISTSAAAFFICASALGISEVHDMVAALRRRLRRAA
Ga0210391_111816682	3300021433	Soil	YLLANWALQAFWPKLASLLLVIGAGAGAFFLCAAALGIGEVRELTQALRRRLRARNP
Ga0213878_103866052	3300021444	Bulk Soil	ADWAVQPFWPKLASLTLVIACAAVAFFLCASALGISEMQELRQAVWRRLHRKR
Ga0210390_100422151	3300021474	Soil	QSFWPKCMSLLLVIACAAAAFFLCAAALRIREVSDIVAALRRRLARRRGQR
Ga0210390_100557131	3300021474	Soil	LVLVIAVSGAGFFLCANALCIVEVQDIAQAVRRRLQRRR
Ga0210390_105590472	3300021474	Soil	ALLLVAGAGEQLLLADWAVQSFWPKCMSLLLVIACAAAAFFLCAAALRIGEVSDIVAALRRRLAGRRGQR
Ga0210398_102434093	3300021477	Soil	PFWPKCASLVLVIAVSGAGFFLCANALRIVEVQDIAQAVRRRLQRRR
Ga0210398_106811292	3300021477	Soil	LLAVSWAGAHYLLENWASQPFWPKCASLVLVIAVSGAGFFLCANALRIVEVHDIVQAVRRRLQRRR
Ga0210409_109049292	3300021559	Soil	YLLENWASQPFWPKCASLVLVIAVSGAGFFLCANALRIVEVRDIVQAVRRRLQRRR
Ga0126371_117323871	3300021560	Tropical Forest Soil	DWAVQPFWPKLASLILVILTAAAAFFLCASALGIDEVHDIAAALRRRLRRAASGPS
Ga0207671_110896892	3300025914	Corn Rhizosphere	LLGGWATQAFWPKCASLTLVIAVAGAAFFFVANALKITEVHDIVAAVRRRLTRQR
Ga0207711_118582741	3300025941	Switchgrass Rhizosphere	GWATQAFWPKCASLTLVIAVAGAAFFFVANALKITEVHDIVAAVRRRLTRQR
Ga0207702_102044401	3300026078	Corn Rhizosphere	WAVQPFWPKCASLTLVIVIGVAAFFLCASALGIGEVHEIRAGVRRRLRRAR
Ga0209158_13029842	3300026333	Soil	AVLLLASWAGAHFLLADWAVQSFWPKCLSLALVIVLAAAAFFVSASALGIGEVHEIARAVQRRLRRAG
Ga0209806_10436384	3300026529	Soil	ISWAGAHLLLADWAVQRFWPKCVSLILVIGSAAGAFFLCANALGVGEVHEIVRAVRRRVRRA
Ga0209004_10758051	3300027376	Forest Soil	WSGAHLLLADWAVQPFWPKCISLLLIIAAAGAGFVLAANALGVREVHEIIAAVRRRLGGA
Ga0209169_106286442	3300027879	Soil	LASLALLAIAWAGGHYLLAGWATQAFWPKCLSLAGVIAVSAGAFFLCANALGIREVHDLVAAVRRRLARRR
Ga0209380_100965364	3300027889	Soil	AVQTFWPKCLSLALVIASGAAAFFFCAHALGIGEVHEIVRAVRRRLRRAT
Ga0209526_100797931	3300028047	Forest Soil	VLLGFSWAGAHWLLADWAVQRFWPKCGSLVLVIASAGAAFFFCANALGIGEVHEIACAVRRRLRRMA
Ga0302234_104951092	3300028773	Palsa	LALLAIAWAGGHYLLAGWATQAFWPKCLSLVAVIALSAGAFFLCANALGIREVHDLVAAVRRRLQRRR
Ga0170824_1153829971	3300031231	Forest Soil	VQAFWPKLLSLMLVIGCAAAAFFLCATAVGIGEVRELTQALRRRLRARNA
Ga0318516_101157323	3300031543	Soil	HLLLADWAVQPFWPKCASLVLVIGVAAAAFFLCANALGIREVHDIVAGLQRRLRRTA
Ga0318541_108362842	3300031545	Soil	VSWAGAHYLLADWAVQPFWPKCARLILVIFTSAAAFFLCASALGIGEVHDITAALRRRLRRAAGGSSG
Ga0318538_105643541	3300031546	Soil	WAGAHYLLADWQVQPFWPKSARLILVIFTAAAAFFLCASALGIGEVRDITAALRRRLRRAASG
Ga0310915_100629553	3300031573	Soil	WAGSHYLLSDWAVEPFWPKFASLTLVILTAAAAFFLCAGALGIDEVHDIVAALRRRLRRATSGPSG
Ga0318542_103164581	3300031668	Soil	LLLADWALQAFWPKCASLVLVIGTSAAAFFLLASLLGINEVHDITAAVRRRLRRRAT
Ga0318561_101162371	3300031679	Soil	SWAGAHYLLSDWAVQPFWPKLASLILVILTAAAAFFLCASALGIDEVHDIAAALRRRLRRAASG
Ga0318572_100305794	3300031681	Soil	LFAVSWAGAHYLLADWQVQPFWPKSARLILVIFTAAAAFFLCASALGIGEVRDITAALRRRLRRAASG
Ga0310686_1008426102	3300031708	Soil	LGKIAVASSLLLGIAWAGGHFLLADWAVQAFWPKLASLLLVIATGAAAFFFAANALGVAEVHDISRAVRRRLQRRA
Ga0310686_1103383824	3300031708	Soil	LLADWAVQAFWPKLVSLMLVIAAAAAAFFFAASALGIGEVRELTQALRRRLRARNP
Ga0307469_123279311	3300031720	Hardwood Forest Soil	AGGRWLLADWAVQAFWPKCLSLALVIATAAGAFFWCANALGIGEVHDIVRAVRRRLRRTP
Ga0318494_100576021	3300031751	Soil	AVSWAGAHYLLADWAVQPFWPKCARLILVIFTSAAAFFLCASALGIGEVHDITAALRRRLRRAAGGSSG
Ga0307475_101787441	3300031754	Hardwood Forest Soil	TGAHYLLADWAVQPFWPKCASLILVIVTAAAAFFLCAGALGIDEVHDIAAALRRRLRRTASGSSG
Ga0307475_102115841	3300031754	Hardwood Forest Soil	GGQLLLANWSVQPFWPKLASLTLVIGCAAVAFFFCASVLGISEVEELKQAVRRRLRRTR
Ga0318535_100732201	3300031764	Soil	WAGAHYLLADWAVQPFWPKCASLVLVIGVGAAAFFLCANALGIREVHDIMAGLRRRLRRT
Ga0318535_101913521	3300031764	Soil	AALLAVSWAGAHYLLADWAVQPFWPKFASLTLVIFTAAAAFFLCASALGIDEVHDIAAALRRRLRRAASG
Ga0318535_103406291	3300031764	Soil	QPFWPKCASLVLVIGMAAAVFFVCANAFGIREVHDIMAGLRRRLRRAR
Ga0318521_101186503	3300031770	Soil	SWAGAHYLLADWAVQPFWPKFASLTLVIFTAAAAFFLCASALGIDEVHDIAAALRRRLRRAASG
Ga0318546_104151762	3300031771	Soil	AGAPLLLADWAVQPFWPKCASLVLVIGVGAAAFFLCANALGIREVHDIMAGLRRRLRRTA
Ga0318543_101190352	3300031777	Soil	HLLLADWAVQPFWPKCASLVLVIGVGAAAFFVCANALGIREVHDIMAGLRRRLRRAR
Ga0318498_101522252	3300031778	Soil	DWAVQPFWPKCTILIVVILTAGAAFFLCASALGIGEVHDITAAVRRRLRRATSGSSG
Ga0318547_107654661	3300031781	Soil	LSKVALACVALLAVCAAGMHYLLADWAVQAFWPKCLGLTLVIAVAAGAFFFCANALGVDEVHDIVAAVRRRVARR
Ga0318552_105469692	3300031782	Soil	AVQPFWPKLASVTLVIACAAGAFFLCAAALGVAEVHELAAALRRRLRRRAT
Ga0318503_100537851	3300031794	Soil	LLSDWAVQPFWPKFASLTLVILTAAAAFFLCAGALGIDEVHDIVAALRRRLRRATSGPNG
Ga0318576_103417681	3300031796	Soil	PKCASLVLVIGVGAAAFFVCANALGIREVHDIMAGLRRRLRRTA
Ga0318568_108938671	3300031819	Soil	WAVQPFWPKFASLTLVILTAAAAFFLCASALGIDEVHDIAAALRRRLRRATSGPSG
Ga0318567_101757223	3300031821	Soil	LADWAVQPFWPKFASLALVIFTAAAAFFLCASALGIEEVHDIAAALRRRLRRAASG
Ga0318567_108669212	3300031821	Soil	QAFWPKCASLVLVIGTSAAAFFLLASLLGISEVHDITAAVRRRLRRRAA
Ga0307478_104548821	3300031823	Hardwood Forest Soil	VAGAGDQLLLADWAVQSFWPKCMSLLLVIACAAAAFFLCAAALRIGEVSDIVAALRRRLARRRGQR
Ga0318517_101265021	3300031835	Soil	FWPKCASLVLVIGVGAAAFFLCANALGIREVHDIMAGLRRRLRRTA
Ga0306919_112729811	3300031879	Soil	LLADWAVQPFWPKCASLALVIGTGAAAFFLCANALGIAEVHDIAAALRRRLRRAAG
Ga0306925_107891292	3300031890	Soil	GSHYLLSDWAVEPFWPKFASLTLVILTAAAAFFLCAGALGIDEVHDIVAALRRRLRRATSGPSG
Ga0310912_101226861	3300031941	Soil	DWAVEPFWPKFASLTLVILTAAAAFFLCAGALGIDEVHDIVAALRRRLRRATSGPSG
Ga0310916_103884351	3300031942	Soil	YAGGRLLLADWAVQAFWPKCASLVLVIGTSAAAFFLLASLLGISEVHDITAAVRRRLRRRAA
Ga0310913_108398011	3300031945	Soil	LLAICWAGAHFLLADWAVQPFWPKCASLALVIGTGAAAFFLCANALGIAEVHDIAAALRRRLRRAAG
Ga0310909_101514781	3300031947	Soil	LLLADWAVQAFWPKCASLVLVIGTSAAAFFLLASLLGISEVHDITAAVRRRLRRRAA
Ga0306926_109010111	3300031954	Soil	AGNHLLLADWAVQPFWPKCASLTLVIGLGAAGFFGCASALGIGEVHELLGAVRRRLRRAA
Ga0307479_104768323	3300031962	Hardwood Forest Soil	DWAVQSFWPKCVSLILVIAVGTAAFFLCASALGIGEVHEIARALKRRLRRAA
Ga0307479_111239932	3300031962	Hardwood Forest Soil	LADWAVQPFWPKCASLVLVIGTSAAAFFICASALGIGEVHDIAAALRRRLRRAA
Ga0318531_104636991	3300031981	Soil	VQPFWPKFASLTLVIFTAAAAFFLCASALGIAEVHDIAAALRRRLRRAASGPS
Ga0306922_104675473	3300032001	Soil	DWAVQPFWPKFASLTLVIFTAAAAFFLCASALGIDEVHDIAAALRRRLRRAASG
Ga0306922_108542631	3300032001	Soil	DWAVQPFWPKCASLLLVIALGAAAFFLCASALGIGEVHDITAAVRRRLRRAVS
Ga0318562_101968743	3300032008	Soil	LADWAVQAFWPKCASLVLVIGTSAAAFFLLASLLGISEVHDITAAVRRRLRRRAA
Ga0318563_107326461	3300032009	Soil	HYLLADWAVQPFWPKCARLILVIFTSAAAFFLCASALGIGEVHDITAALRRRLRRAAGGSSG
Ga0318545_101231821	3300032042	Soil	ADWAVQPFWPKCASLVLVIGVGAAAFFVCANALGIREVHDIMAGLRRRLRRAR
Ga0318558_100688163	3300032044	Soil	VQPFWPKCASLVLVIGVGAAAFFLCANALGIREVHDIMAGLRRRLRRTA
Ga0318558_101225891	3300032044	Soil	QPFWPKCASLVLVIGVGAAAFFVCANALGIREVHDIMAGLRRRLRRAR
Ga0318558_106266372	3300032044	Soil	SAALFAVSWAGAHYLLADWQVQPFWPKSARLILVIFTAAAAFFLCASALGIGEVRDITAALRRRLRRAASG
Ga0318506_101266801	3300032052	Soil	LFAVSWAGAHLLLADWAVQPFWPKCASLVLVIGVGAAAFFLCANALGIREVHDIMAGLRRRLRRTA
Ga0318570_105027921	3300032054	Soil	CALAYAGGRLLLADWAVQAFWPKCASLVLVIGTSAAAFFLLASLLGISEVHDITAAVRRRLRRRAA
Ga0318533_100978603	3300032059	Soil	SWAGAHLLLADWAVQPFWPKCASLVLVIGVGAAAFFLCANALGIREVHDIMAGLRRRLRRTA
Ga0318504_100329061	3300032063	Soil	LLADWAVQPFWPKCARLILVIFTSAAAFFLCASALGIGEVHDITAALRRRLRRAAGGSSG
Ga0318510_103565951	3300032064	Soil	LLAVSWAGSHYLLSDWAVEPFWPKFASLTLVILTAAAAFFLCAGALGIDEVHDIVAALRR
Ga0306920_1016772642	3300032261	Soil	AGGRLLLADWAVQAFWPKCASLVLVIGTSAAAFFLLASLLGISEVHDITAAVRRRLRRRA
Ga0335078_112789562	3300032805	Soil	LLLAEWAVQSFWPTCGSLLLVIAVAGGAFFLCANALRIGEVHEIVSAVRRRLERAR
Ga0335069_100978681	3300032893	Soil	SAALATIAWGGDHLLLADWAVQPFWPKCASLALVIALAAAAFFLCAHALQIGEVHDIVAALRRRLRRAA
Ga0310914_104417961	3300033289	Soil	GAHYLLADWAVQPFWPKCARLILVIFTSAAAFFLCASALGIGEVHDITAALRRRLRRAAGGSSG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F046488

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences