NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F046411

Metagenome / Metatranscriptome Family F046411

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F046411
Family Type Metagenome / Metatranscriptome
Number of Sequences 151
Average Sequence Length 95 residues
Representative Sequence YYDRSYGNCEFTGCNDITLATISNPASATPSITYTRVTTSSMPNLVTANNPLQAGFLGDYMWVAVDGHGRANIVWADTRGLNGAVEEDIYFAVTK
Number of Associated Samples 138
Number of Associated Scaffolds 151

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.99 %
% of genes near scaffold ends (potentially truncated) 97.35 %
% of genes from short scaffolds (< 2000 bps) 95.36 %
Associated GOLD sequencing projects 131
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(17.218 % of family members)
Environment Ontology (ENVO) Unclassified
(26.490 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.669 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 5.69%    β-sheet: 40.65%    Coil/Unstructured: 53.66%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 151 Family Scaffolds
PF08445FR47 4.64
PF12902Ferritin-like 4.64
PF01523PmbA_TldD 1.99
PF00082Peptidase_S8 1.99
PF13662Toprim_4 1.32
PF02922CBM_48 1.32
PF11838ERAP1_C 1.32
PF00355Rieske 1.32
PF00364Biotin_lipoyl 0.66
PF00300His_Phos_1 0.66
PF00899ThiF 0.66
PF02163Peptidase_M50 0.66
PF05237Obsolete Pfam Family 0.66
PF12848ABC_tran_Xtn 0.66
PF00378ECH_1 0.66
PF11455MazE-like 0.66
PF00248Aldo_ket_red 0.66
PF04916Phospholip_B 0.66
PF02575YbaB_DNA_bd 0.66
PF13511DUF4124 0.66
PF12697Abhydrolase_6 0.66
PF02146SIR2 0.66
PF08734GYD 0.66
PF00326Peptidase_S9 0.66
PF11695DUF3291 0.66
PF07977FabA 0.66

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 151 Family Scaffolds
COG0312Zn-dependent protease PmbA/TldA or its inactivated homologGeneral function prediction only [R] 1.99
COG0718DNA-binding nucleoid-associated protein YbaB/EfbCTranscription [K] 0.66
COG07643-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydrataseLipid transport and metabolism [I] 0.66
COG0846NAD-dependent protein deacetylase, SIR2 familyPosttranslational modification, protein turnover, chaperones [O] 0.66
COG4274Uncharacterized conserved protein, contains GYD domainFunction unknown [S] 0.66
COG4706Predicted 3-hydroxylacyl-ACP dehydratase, HotDog domainLipid transport and metabolism [I] 0.66

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908016|OU_2_1_1_newblercontig58158All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300000956|JGI10216J12902_116279856All Organisms → cellular organisms → Bacteria1119Open in IMG/M
3300001535|A3PFW1_10196759All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria828Open in IMG/M
3300002120|C687J26616_10030299All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium1993Open in IMG/M
3300003994|Ga0055435_10025971All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1282Open in IMG/M
3300004157|Ga0062590_100572272All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300005171|Ga0066677_10786370All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300005176|Ga0066679_10175701All Organisms → cellular organisms → Bacteria1354Open in IMG/M
3300005177|Ga0066690_10994257All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300005178|Ga0066688_10209854All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1238Open in IMG/M
3300005181|Ga0066678_10829323All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300005216|Ga0068994_10118577All Organisms → cellular organisms → Bacteria696Open in IMG/M
3300005445|Ga0070708_100178929All Organisms → cellular organisms → Bacteria1982Open in IMG/M
3300005446|Ga0066686_10265837All Organisms → cellular organisms → Bacteria1160Open in IMG/M
3300005446|Ga0066686_10301054All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1089Open in IMG/M
3300005450|Ga0066682_10885006All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300005468|Ga0070707_102120964All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300005471|Ga0070698_101230818All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300005536|Ga0070697_101772079All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300005555|Ga0066692_10771764All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300005555|Ga0066692_10973783All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300005557|Ga0066704_10892171All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300005558|Ga0066698_10429925All Organisms → cellular organisms → Bacteria904Open in IMG/M
3300005558|Ga0066698_10781199All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300005559|Ga0066700_10085592All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia → Thermoflexales → Thermoflexaceae → Thermoflexus → Thermoflexus hugenholtzii2034Open in IMG/M
3300005561|Ga0066699_10854444All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium637Open in IMG/M
3300005568|Ga0066703_10010203All Organisms → cellular organisms → Bacteria4487Open in IMG/M
3300005575|Ga0066702_10362698All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium881Open in IMG/M
3300005586|Ga0066691_10814763All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300005598|Ga0066706_11260277All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300005764|Ga0066903_101346548All Organisms → cellular organisms → Bacteria1337Open in IMG/M
3300005885|Ga0075284_1033681All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300006049|Ga0075417_10132974All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1148Open in IMG/M
3300006059|Ga0075017_101177730All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300006354|Ga0075021_10769704All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300006354|Ga0075021_10900252All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062574Open in IMG/M
3300006576|Ga0074047_11655654All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium687Open in IMG/M
3300006796|Ga0066665_11227034All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300006845|Ga0075421_100991236All Organisms → cellular organisms → Bacteria952Open in IMG/M
3300006852|Ga0075433_10570375All Organisms → cellular organisms → Bacteria994Open in IMG/M
3300006854|Ga0075425_100543278All Organisms → cellular organisms → Bacteria1337Open in IMG/M
3300006871|Ga0075434_100479713All Organisms → cellular organisms → Bacteria1265Open in IMG/M
3300006904|Ga0075424_100151658All Organisms → cellular organisms → Bacteria2456Open in IMG/M
3300006904|Ga0075424_101471156All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300007265|Ga0099794_10692110All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium543Open in IMG/M
3300009012|Ga0066710_100760296All Organisms → cellular organisms → Bacteria1482Open in IMG/M
3300009012|Ga0066710_103739370All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300009137|Ga0066709_104531142All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300009162|Ga0075423_11436215All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300009167|Ga0113563_13886797All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300009840|Ga0126313_10189001All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1576Open in IMG/M
3300010304|Ga0134088_10028956All Organisms → cellular organisms → Bacteria2489Open in IMG/M
3300010336|Ga0134071_10698212All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300010359|Ga0126376_12121295All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300010360|Ga0126372_11616225All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300010361|Ga0126378_12056781All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300010364|Ga0134066_10363270All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300010376|Ga0126381_102971901All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300012174|Ga0137338_1076530All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium725Open in IMG/M
3300012199|Ga0137383_11284762All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300012204|Ga0137374_10332134All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1234Open in IMG/M
3300012209|Ga0137379_11623436All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300012285|Ga0137370_10949125All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300012350|Ga0137372_10208724All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1558Open in IMG/M
3300012350|Ga0137372_10314630All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1209Open in IMG/M
3300012355|Ga0137369_10316507All Organisms → cellular organisms → Bacteria1152Open in IMG/M
3300012360|Ga0137375_10336019All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1348Open in IMG/M
3300012362|Ga0137361_11213242All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300012532|Ga0137373_10956196All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300012582|Ga0137358_10336780All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1023Open in IMG/M
3300012925|Ga0137419_11337625All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300012930|Ga0137407_11477860All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300012931|Ga0153915_13001087All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300012944|Ga0137410_10557888All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium942Open in IMG/M
3300012944|Ga0137410_11183257All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300012957|Ga0164303_11538037All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300012975|Ga0134110_10382194All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300013006|Ga0164294_10778922All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300014058|Ga0120149_1144257All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300014823|Ga0120170_1037210All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1178Open in IMG/M
3300015245|Ga0137409_10510312All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1026Open in IMG/M
3300015358|Ga0134089_10571644All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300016319|Ga0182033_10898336All Organisms → cellular organisms → Bacteria → Acidobacteria784Open in IMG/M
3300016341|Ga0182035_10424271All Organisms → cellular organisms → Bacteria1122Open in IMG/M
3300016387|Ga0182040_11129084All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300016404|Ga0182037_10602543All Organisms → cellular organisms → Bacteria932Open in IMG/M
3300016404|Ga0182037_10733063All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300017654|Ga0134069_1323582All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300017654|Ga0134069_1324014All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300017656|Ga0134112_10110987All Organisms → cellular organisms → Bacteria1036Open in IMG/M
3300017659|Ga0134083_10551990All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300018071|Ga0184618_10476704All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300018431|Ga0066655_10268178All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300020022|Ga0193733_1189733All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300020581|Ga0210399_10038043All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3849Open in IMG/M
3300020581|Ga0210399_11091543All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300021178|Ga0210408_10161660All Organisms → cellular organisms → Bacteria1776Open in IMG/M
3300021420|Ga0210394_11359540All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300021475|Ga0210392_10530528All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300021478|Ga0210402_11420818All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300022525|Ga0242656_1132075All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300022726|Ga0242654_10269224All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300022756|Ga0222622_10470358All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300024186|Ga0247688_1079403All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300024232|Ga0247664_1067013All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300024290|Ga0247667_1022410All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1215Open in IMG/M
3300024323|Ga0247666_1037608All Organisms → cellular organisms → Bacteria998Open in IMG/M
3300025915|Ga0207693_11065967All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300025939|Ga0207665_10471884All Organisms → cellular organisms → Bacteria966Open in IMG/M
3300026295|Ga0209234_1198718All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300026317|Ga0209154_1108153All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1181Open in IMG/M
3300026326|Ga0209801_1014677All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales3954Open in IMG/M
3300026334|Ga0209377_1284593All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300026527|Ga0209059_1001178All Organisms → cellular organisms → Bacteria11994Open in IMG/M
3300026532|Ga0209160_1279816All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300026540|Ga0209376_1107462All Organisms → cellular organisms → Bacteria1414Open in IMG/M
3300027521|Ga0209524_1070919All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300027870|Ga0209023_10663150All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300027894|Ga0209068_10712302All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300027909|Ga0209382_11198612All Organisms → cellular organisms → Bacteria777Open in IMG/M
3300027954|Ga0209859_1010623All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1779Open in IMG/M
(restricted) 3300028043|Ga0233417_10431924All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300028536|Ga0137415_11049757All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300028710|Ga0307322_10127192All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300028828|Ga0307312_11036235All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium543Open in IMG/M
3300031058|Ga0308189_10327050All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium609Open in IMG/M
3300031231|Ga0170824_113856128All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300031561|Ga0318528_10754235All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300031681|Ga0318572_10659453All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300031715|Ga0307476_11311325All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300031718|Ga0307474_10966252All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300031719|Ga0306917_10278703All Organisms → cellular organisms → Bacteria1287Open in IMG/M
3300031765|Ga0318554_10538270All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300031768|Ga0318509_10229910All Organisms → cellular organisms → Bacteria → Proteobacteria1034Open in IMG/M
3300031778|Ga0318498_10511023All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300031793|Ga0318548_10365776All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300031794|Ga0318503_10132393All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300031820|Ga0307473_10277460All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae1043Open in IMG/M
3300031820|Ga0307473_10733765All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300031833|Ga0310917_10580086All Organisms → cellular organisms → Bacteria → Acidobacteria762Open in IMG/M
3300031897|Ga0318520_10977737All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300031954|Ga0306926_12682864All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300031962|Ga0307479_11372289All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300032008|Ga0318562_10490293All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300032044|Ga0318558_10143977All Organisms → cellular organisms → Bacteria1144Open in IMG/M
3300032173|Ga0315268_11621233All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300032177|Ga0315276_11875102All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300032180|Ga0307471_100991423All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1007Open in IMG/M
3300032180|Ga0307471_101463174All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300032256|Ga0315271_10960210All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300033432|Ga0326729_1062223All Organisms → cellular organisms → Bacteria571Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil17.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil15.23%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.92%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil5.96%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.64%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.64%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.31%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.31%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment2.65%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.65%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.65%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.99%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.32%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment0.66%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater0.66%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.66%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.66%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.66%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.66%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.66%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.66%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.66%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.66%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.66%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.66%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.66%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.66%
Environmental → Unclassified → Unclassified → Unclassified → Unclassified → 0.66%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908016Sample 642EnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001535Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-PF-15A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300002120Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2EnvironmentalOpen in IMG/M
3300003994Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005216Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLA_D2EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005575Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005885Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_401EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006576Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012174Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300013006Oligotrophic lake water microbial communities from Sparkling Lake, Wisconsin, USA - GEODES005 metaGEnvironmentalOpen in IMG/M
3300014058Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25MEnvironmentalOpen in IMG/M
3300014823Permafrost microbial communities from Nunavut, Canada - A3_80cm_0MEnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300022525Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300024186Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29EnvironmentalOpen in IMG/M
3300024232Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05EnvironmentalOpen in IMG/M
3300024290Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08EnvironmentalOpen in IMG/M
3300024323Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027521Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027870Freshwater and sediment microbial communities from Lake Erie, Canada (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027954Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)EnvironmentalOpen in IMG/M
3300028043 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MGEnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028710Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031793Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21EnvironmentalOpen in IMG/M
3300031794Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032173Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_topEnvironmentalOpen in IMG/M
3300032177Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300033432Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fractionEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
OU_013837502124908016NNLWIGYYDRSYGTCEATGCNDITLARVTSPASPAATVAAYTRVTSSSMPNLVPANNVVQAGFLGDYMWVAADPTGRPHVAWADTRGRNGTVEEDIYYTNFGDFNDGDVR
JGI10216J12902_11627985613300000956SoilGSCETTGCNDITLTRIANPASPSPTISSTRITTSSMPNMVAANNPIEAGFLGDYMWVATDPKGRALIVWGDNRGQNGTVEQDIYFARSS*
A3PFW1_1019675933300001535PermafrostSTLYVAFYDRHFGTCETDGCNDITLATIGSPASATPSFSYTRLTTSSMPNLVPANNPVQAGFIGDYMWVATSGNGLPYVVWADTRGQGGTVEEDIYFSR*
C687J26616_1003029913300002120SoilGNCEFDGCNDITLAAVSNPASASPSVSFTRLTTSSMPNLTPANNPVQAGFLGDYMWVTVDNKGRPHVVWADTRGLGGTVEEDIYYATYP*
Ga0055435_1002597133300003994Natural And Restored WetlandsGNCEFTGCNDITLVKVRNPASNSPQVSYQRLTTSSMPNLVPANNPIQAGFLGDYMWVTVDKDGTPYVVWADTRGRNGTVEEDIFFYKGGGGH*
Ga0062590_10057227213300004157SoilKKLFVGYYDRSYGNCETTGCNDITMATIKNPASPSPNVDYMRITTSSMPNLVVANNPIQAGFLGDYMWVSTDLKGNPSLVWADTRGLGGTVEEDVYLAKPKD*
Ga0066677_1078637023300005171SoilCETTGCNDITLATVESAATTSPSIKYTRITTSSMPNLVPSNNPLQAGFLGDYMWVAVDSKGNPLIAWADTRGLNGTVEEDVYFANP*
Ga0066679_1017570113300005176SoilYGNCEFTGCNDITLANVHNPWSNVPSIGHHRITTGSMPNLIPTNNPLEAGFLGDYMWLAVDARGRANIVWADTRGLNGAVEEDVYFSRFSGGD*
Ga0066690_1099425713300005177SoilYGNCEQTGCNDITLARVANPASASPNVSYDRVTTSSMPNLLPSNNPLEAGFLGDYMYMAVDAKGFANIVWSDTRGLGGTVEEDIYFARMPGRP*
Ga0066688_1020985413300005178SoilITAAEVHRPASNRASVGYTRVTTSSMPNLVVANNPAQAGFLGDYMWVTVDNRGRANVVWADTRGLNQTVEEDVYFAVVGGGD*
Ga0066678_1082932323300005181SoilDGCNDITMATVGGPASGSPSFTYQRLTTSSMPNLVPANNPVEAGFLGDYMWLSVDGGGHPLIVWADTRGLGGAVEEDVYFAKPTG*
Ga0068994_1011857713300005216Natural And Restored WetlandsGSCETTGCNDITLAGISSPASASPSVKYTRLTTSSMPNLVVANNPAQAGFLGDYMWVTVDNKGQPLVVWADTRGLNGTVEEDIYFTRYP*
Ga0070708_10017892943300005445Corn, Switchgrass And Miscanthus RhizosphereGQVLWVAYYDRSYGNCEFTGCNDITLAKVQNPATAVPAMTYQRLTTTSMPNLVPANNPVQAGFLGDYMWVAVDSNGRPHVVWADTRGLGGTVEEDVYFFRGTIP*
Ga0066686_1026583733300005446SoilYYDRSYGSCETTGCNDITLATVESAATTSPSIKYTRITTSSMPNLVPSNNPLQAGFLGDYMWVAVDSKGNPLIAWADTRGLNGTVEEDVYFANP*
Ga0066686_1030105433300005446SoilWVAYYDRSYGTCEFTGCNDITLARIANAASSSPTLKYTRLTTESMPNLVIANNPIQAGFLGDYMWVEIDSKGRPLVVWADTRGLDGTVEEDIYFARP*
Ga0066682_1088500613300005450SoilVAYYDRSYGTCEFEGCNDITLAQVTNPVSALPAISYTRLTTASMPNLVPANNPFQTGFLGDYMWVAVDGEGRPHVVWADTRGRNGTVEEDIYFATLDLLPPASLLRSR*
Ga0070707_10212096423300005468Corn, Switchgrass And Miscanthus RhizosphereNDITLARVANPASTSPNVSYDRVTTASMPNLLPSNNPLEAGFLGDYMYMAVDAKGFANIVWSDTRGLGGTVEEDIYFARMPGRP*
Ga0070698_10123081813300005471Corn, Switchgrass And Miscanthus RhizosphereKLYVTYYDRSYGNCEFTGCNDITLATISNPASATPSITYTRVTTSSMPNLVTANNPLQAGFLGDYMWVAVDGHGRANIVWADTRGLNGAVEEDIYFAVTK*
Ga0070697_10177207913300005536Corn, Switchgrass And Miscanthus RhizosphereSCETTGCNDITLATIGGAASDSPSISYTRITTSSMPNLVPANNPLQAGFLGDYMWVTVDAKGRPLIVWADTRGQNGTVEEDIYFANP*
Ga0066692_1077176423300005555SoilYYDRSYGNCEFTGCNDITLATISNPASATPSITYTRVTTSSMPNLVTANNPLQAGFLGDYMWVAVDGHGRANIVWADTRGLNGAVEEDIYFAVTK*
Ga0066692_1097378323300005555SoilYYDRSYGNCEFTGCNDITLATVTNAASASPTIAYTRVTTASMPNLVPSNNPIQAGFLGDYMWVDVDSMGRALVVWADTRGLDGTVEEDIYFARPLP*
Ga0066704_1089217123300005557SoilSCETTGCNDITLATISDPAGDSPSITYTRITTSSMPNLIPANNPLQAGFLGDYMWVSIDGKGRPLIVWADTRGLNGTVEEDIYFANP*
Ga0066698_1042992513300005558SoilTLATITKAATGSPKIKYQRITTASMPNLVPANNPIQAGFIGDYMWVSSDSDGNPLIAWADTRGLRGAVEEDIYAATP*
Ga0066698_1078119913300005558SoilENEGCNDITLARVRAPDNATPSVTYQRITTSSMPNLLPSNDPAQAGFLGDYMWVASDSKGNPHVVWADTRGLNNSVEEDIYLYRPGL*
Ga0066700_1008559213300005559SoilNCEFTGCNDITLASIRGPASGRPTFTYQRLSNSSMPNLVPANNPAQAGFLGDYMWVATGSSGAPYVVWASTRGLNSTVEEDIYFAR*
Ga0066699_1085444413300005561SoilSYGSCETTGCNDITLAKITNAASSSRSFKYTRLTTDSMPNLVVANNPIQAGFLGDYMWVDLDSQGRPLVVWADTRGLDGTVEEDIYFARPLP*
Ga0066703_1001020313300005568SoilAYYDRSYGSCETTGCNDITLARVTDAASSSRTFKYTRLTTDSMPNLVVANNPIQAGFLGDYMWVDLDSKGRPLVVWADTRGLDGAVEEDIYFARPVP*
Ga0066702_1036269813300005575SoilVSLFGKNLWIAFYDRRYGNCETNGCNDITLATVGKAATSTPTFAYRRLTTSSMPNLVVANNPLQAGFLGDYMWVSALGNIGPLVVWADTRGMHGAVEEDVYFAKLR*
Ga0066691_1081476313300005586SoilAYYDRSYGSCETTGCNDITLAKITNAASSSRSFKYTRLTTDSMPNLVVANNPIQAGFLGDYMWVDLDSKGRPLVVWADTRGLDGTVEEDVYFARPIP*
Ga0066706_1126027723300005598SoilRSYGNCEQTGCNDITLARVANPASASPNVSYDRVTTSSMPNLLPSNNPLEAGFLGDYMYMAVDAKGFANIVWSDTRGLGGTVEEDIYFARMPGRP*
Ga0066903_10134654813300005764Tropical Forest SoilTLAKVQNPATGAPTMTYQRLTTSSMPNLVPANNPAQAGFLGDYMWVAVDHNGRPYVVWADTRGLGGTVEEDVYFAKGPLP*
Ga0075284_103368123300005885Rice Paddy SoilRSYGNCEFSGCNDITLAQVRHPASGSPSTSYSRLTTASMPNLLPSNNPLEAGFLGDYMWVTTDSHGAPYVVWADTRGLAGSVEEDIYFNWSQGGGH*
Ga0075417_1013297413300006049Populus RhizosphereTISYTRLTTASMPNLVPTNNPFQAGFLGDYMWVAVDGDGRPHAVWADTRGRNGTVEEDIYFATLDLLPPPPAALLRSR*
Ga0075017_10117773013300006059WatershedsTGCNDITLASVRHPATQKPSLDYTRVTTSSMPNLVVANNPAQAGFLGDYMWLAVDDQGRANIVWADTRGLNGTVEEDIYFALVE*
Ga0075021_1076970413300006354WatershedsAYYDRSYGNCETTGCNDITLAAVKRPATGSATVTYHRITTASMPNLVVANNPIEAGFLGDYMWLTVDAMGRPNIVWADTRGLHGTVEEDIYFSRFSGNE*
Ga0075021_1090025213300006354WatershedsVGYYDRSYGKCETTGCNDITLARISRPLSASARASYTRVTTSSMPNLVVANNPIQAGFLGDYMWVAVDAHGNAHVVWADTRGRNGTVEEDIYYAKFGDHDDHDEDRR*
Ga0074047_1165565413300006576SoilCETTGCNDITMAAVSKPASSGRSFKYTRITTSSMPNLVVANNPIQAGFLGDYMWVSTDTKGNPLITWADTRGLGGTVEEDIYLAKP*
Ga0066665_1122703413300006796SoilKYGNCEFTGCNDITLARVNQPRGSKTITYTRLTTSSMPNLVVANNPVQAGFIGDYMWVTVDSKGLPYVVWADTRSRGGTAVDEDIYFATG*
Ga0075421_10099123613300006845Populus RhizosphereLFVGYYDRSYGNCETTGCNDITMATVKNPASPTPNVDHTRITTSSMPNLVVANNPIQAGFLGDYMWVSTDLKGNPSLVWADTRGLGGTVEEDVYLAKPND*
Ga0075433_1057037513300006852Populus RhizosphereISYTRLTTTSMPNLIPANNPFQAGFLGDYMWVAVDGEGRPHVVWADTRGRNGMVEEDVYFATLDLLLAAPAALLRSR*
Ga0075425_10054327813300006854Populus RhizospherePDGKKFFIAYYDREYGNCETTGCNDITLATISNAATGSPTIKYQRLTTASMPNLVVANNPVEAGFLGDYMWVSTDSKGNPLIAWADTRGLRGAVEEDIYAATP*
Ga0075434_10047971323300006871Populus RhizosphereLSETNTIGYYDRAYGNCEFEGCNDITLARVANPASAPPTISYTRLTTTSMPNLIPANNPFQAGFLGDYMWVAVDGEGRPHVVWADT
Ga0075424_10015165833300006904Populus RhizosphereCNDITLAQVVNPASAPPTISYTRLTTASMPNLVPANNPFQAGFLGDYMWVAADGDGRPHVVWADTRGRNGTVEEDIYFATLDLLPPPPAALLRSR*
Ga0075424_10147115613300006904Populus RhizosphereYYDRSYGNCETTGCNDITMATVKNPASPTPNVDHTRITTSSMPNLVVANNPIQAGFLGDYMWVSTDLKGNPSLVWADTRGLGGTVEEDVYLAKPND*
Ga0099794_1069211013300007265Vadose Zone SoilRASYTRVTTSSMPNLVVANNPIQAGFLGDYMWVAVDSRGNPHVVWADTRGRNGTVEEDIYFATLDLLLPAPASLLRSR*
Ga0066710_10076029613300009012Grasslands SoilDITLATIEKAATGSPTIKYTRVTTSSMPNLVPANNPIQAGFLGDYMWVAVDAKGQPYIVWSDTRGLDGAVEEDIYFAKP
Ga0066710_10373937023300009012Grasslands SoilPDGSDLWIGYYDRSYGRCESTGCNDITLARVNRPATSGARVSYQRVTTSSMPNLVPANNPIQAGFLGDYMWVDLDSKGRPLVVWADTRGLDGAVEEDVYFARPVP
Ga0066709_10453114223300009137Grasslands SoilAQVANPASASPAISYTRLTTASMPTLVPATNPCQAGFLGDYMWVAVDGEGHRHVVWADTRGRNGTVEEDIYFATLDLLPPPPAALLRSR*
Ga0075423_1143621523300009162Populus RhizosphereVLWVAYYDRSYGNCEFEGCNDITLAQVVNPASAPPTISYTRLTTASMPNLVPANNPFQAGFLGDYMWVAADGDGRPHVVWADTRGRNGTVEEDIYFATLDLLPPPPAALLRSR*
Ga0113563_1388679713300009167Freshwater WetlandsDSSNRITLAKVSNAASGAPTVKYTWMTTESMPNLTSANNPVQAGFLGDYMWVTMDANGKAHVVWADTRGLGGAAEEDIYFATSK*
Ga0126313_1018900123300009840Serpentine SoilFIGYYDRSYGNCETTGCNDITMVTVGKPATASPTFKYTRITTSSMPNLVVANNPIQAGFLGDYMWVSTDTKGRPLVLWADTRGLGGTVEEDVYLARP*
Ga0134088_1002895623300010304Grasslands SoilVAYYDRSYGSCETTGCNDITLAKITNAASSSRSFKYTRLTTDSMPNLVVANNPIQAGFLGDYMWVDLDSQGRPLVVWADTRGLDGTVEEDIYFARPLP*
Ga0134071_1069821213300010336Grasslands SoilNDITLARVRAPDNATPSVTYQRITTSSMPNLLPSNDPAQAGFLGDYMWVASDSKGNPHVVWADTRGLNNSVEEDIYLYRPGL*
Ga0126376_1212129513300010359Tropical Forest SoilYDRSYGNCEFDGCNDITLAKVLNPASATPTIGYTRLTTASMPNLVPANNPLEAGFLGDYMWVAVDKVGNPYVVWADTRGLYATVEEDVYFATVKR*
Ga0126372_1161622523300010360Tropical Forest SoilCNDITLAKVQNPATAAPTMTYQRLTTSSMPNLVPANNPVQAGFLGDYMWVAVDSNGRPHVVWADTRGLGGTVEEDVYFFRGTIP*
Ga0126378_1205678113300010361Tropical Forest SoilYDRSYGDCESTGCNDITLATIRNPTSATPSVRHSRVTTGSMPNLTAANNPIQAGFLGDYMWVTLDAWGQPNIVWADTRGLNGTVEEDIYFARMGENEQ*
Ga0134066_1036327023300010364Grasslands SoilGCNDITLAGVSNPASAAPTVSYRRVTSSSMPNLTPTNNPLQAGFLGDYMWVAVDGNGWPNIVWADTRGLNGAVEEDVYFVRLPPQ*
Ga0126381_10297190113300010376Tropical Forest SoilTGCNDITLATIRNPRSATPSVRHSRVTTSSMPNLTATNNPIQAGFLGDYMWVALDAWGQPNIVWADTRGLNGTVEEDIYFARMSEDQQ*
Ga0137338_107653023300012174SoilSDGKTLWVAYYDRKYGNCESTGCNDITLAKVKNPASNSPSVSYQRITTSSMPNLVPANNPIEAGFLGDYMWVTVDNRGIPYVVWADTRGRNGTVEEDIYSFKGDD*
Ga0137383_1128476223300012199Vadose Zone SoilTTGCNDITLATITRAATASPTIKYQRITTGSMPNLVVANNPLEAGFLGDYMWVSSDSHGNPLIAWADTRGLRGSVEEDVYAATP*
Ga0137374_1033213413300012204Vadose Zone SoilNCEFDGCNDITLVGIRNPASASPSFSYKRLTTSSMPNLVVANNPLEAGFLGDYMWVTVDARGNPFVVWGDTRGLNGTVEEDVYFATVGGGN*
Ga0137379_1162343623300012209Vadose Zone SoilVAFYDREYGNCETTGCNDITLATISNAATGSPTIKYKRITTASMPNLVVANNPVEAGFLGDYMWVSTDSDGNPLIAWADTRGLRGSVEEDIYAATP*
Ga0137370_1094912513300012285Vadose Zone SoilREYGNCETTGCNDITLATISKAATGSPKIKYQRITTASMPNLVPANNPIQAGFIGDYMWVSSDSDGNPLIAWADTRGLRGAVEEDIYAATP*
Ga0137372_1020872443300012350Vadose Zone SoilQPWGAVAPNGEKLFVGYYDRSYGNCETSGCNDITMATVQNPASASPTVGHTRITTSSMPNLVVANNPLQAGFLGDYMGVSTDAKGHPSLVWADTRGLGGTIEEDLYLATP*
Ga0137372_1031463023300012350Vadose Zone SoilWSAVSLFGKSLWIAFYDRHYGNCENTGCNDITLATVASAATPTPTFSWRRLTTGSMPNLVVANNPLQAGFLGDYMWVSALGNIGPLVVWADTRGLRGSVEEDVYFAKLK*
Ga0137369_1031650713300012355Vadose Zone SoilTCEFEGCNDITLAQVTNPASASPALSYTRLTTASMPNLVPANNPFQAGFLGDYMWVAVDGEGRPHVVWADTRGRNGTVEEDIYFATLDLLPPPSASLLRSR*
Ga0137375_1033601913300012360Vadose Zone SoilTLARVRAPAAATPSVTYQRITTSSMPNLVPSNNPAQAGFLGDYMWVASDSKGNPHVVWADTRGLNNAVEEDIYFFRPGL*
Ga0137361_1121324223300012362Vadose Zone SoilYDRSYGRCEATGCNDITLAKVFQPATPAARATYTRVTTSSMPNLVPANNALEAGFLGDYMWVAADANGRPHVVWADTRGRRGTVEEDIYYAKFGDFDEDDEPWSGSR*
Ga0137373_1095619623300012532Vadose Zone SoilYYDRSYGNCEQTGCNDITLARVANPASASPNVSYVRVTTSSMPNLLPSNNPLEAGFLGDYMYMAIDAKGFANIVWSDTRGLGGTVEEDIYFARIPGKP*
Ga0137358_1033678023300012582Vadose Zone SoilSYGNCEFRGCNDITLATVRNPSSNAPSVGHHRITTSSMPNLTAANNPAQAGFLGDYMWLAVDARGRANIVWADTRGLNGTVEEDVYFSRFSGGD*
Ga0137419_1133762513300012925Vadose Zone SoilEFTGCNDITAAAVRHPASNQSSVDYTRVTTSSMPNLVVANNPAQAGFLGDYMWVTVDNRGRANVVWADTRGLNQTVEEDVYFAVVGGQD*
Ga0137407_1147786013300012930Vadose Zone SoilRSYGNCEQTGCNDITLAKVARPTSTTPSVSHRRITTSSMPNLTTANNPTQAGFLGDYMWLALDARGRPNVVWADTRGLNGTTEEDVYFSRVSVDRDD*
Ga0153915_1300108713300012931Freshwater WetlandsMLRPLAKVKNAGTASPAFSYQRITTSSMPNLVNANNPLQAGFLGDYMWVTVDKTNRAYVVWADTRGLDGTVEEDIYYATVKVGGAD*
Ga0137410_1055788813300012944Vadose Zone SoilSAPPTISYTRLTTASMPNLVPANNPFQAGFLGDYMWVAVDGEGRPHVVWADTRGRNGTVEEDIYFATLDLLLPAPASLLRSR*
Ga0137410_1118325713300012944Vadose Zone SoilNCETTGCNDITLAAVNRPATGSATVSYHRITTASMPNLVVANNPIEAGFLGDYMWLTVDAMGRPNIVWADTRGLFGSVEEDIYFSRFSGNE*
Ga0164303_1153803713300012957SoilGYYDRSYGQCETTGCNDITLARVSRPTSLSPGVSYTRLTTSSMPNLVTANNPIQAGFLGDYMWVAVDADGRPHVVWADTRGRNGTVEEDVYYARLGGDDQDDDSDHQH*
Ga0134110_1038219413300012975Grasslands SoilGCNDITLAQVANPASASPAISYTRLTTASMPNLVPANNPFQAGFLGDYMWVAVDGEGHPHVVWADTRGRNGTVEEDIYFATLDLLPPPPAALLRSR*
Ga0164294_1077892213300013006FreshwaterMHGECEHTGCNDITLVHVLEPASASPVLHFERITTSSMPNLLPENNPIQAGFLGDYMYLSLDTKGFANIAWSDTRGLGGVVEEDIYFARVSAETGNHKDAVHN*
Ga0120149_114425713300014058PermafrostTGCNDITMATVENPVSAGRTFKYTRITTDSMPNLVVANNPLQAGFLGDYMWGSTDTKGKPYLVWADTRGLGGTVEEDIYSASP*
Ga0120170_103721033300014823PermafrostGSVSSNGSTLYVAFYDRHFGTCETDGCNDITLATIGSPASATPSFSYTRLTTSSMPNLVPANNPVQAGFIGDYMWVATSGNGLPYVVWADTRGQGGTVEEDIYFSR*
Ga0137409_1051031223300015245Vadose Zone SoilVLWVAYYDRSYGNCEFEGCNDITLAQVAHPASAPPTISYTRLTTASMPNLVPANNPFQAGFLGDYMWVAVDGEGRPHVVWADTRGRNGTVEEDIYFATLDLLLPAPASLLRSR*
Ga0134089_1057164413300015358Grasslands SoilTLAQVANPASASPAISYTGLTTASMPNLVPANNPFQAGFLGDYMWVAVDGEGRPHVVWADTRGRNGTVEEDVYFATLDLLPPPPAALLRSR*
Ga0182033_1089833613300016319SoilCNDITLAEIRDPTSANPKIKHRRVTTSSMPNLTAANNPIQAGFLGDYMWITLDAWGRPNIVWADTRGLNGTVEEDVYFSRVGQGD
Ga0182035_1042427123300016341SoilAAYYDRSYGDCEFTGCNDITLAEIRDPTAAKPKIKHRRITTSSMPNLTAANNPVQAGFLGDYMWITLDRWDRPNIVWADTRGLNGTVEEDVYFSRVDQED
Ga0182040_1112908413300016387SoilYDRSYGNCESTGCNDITLATIRNPTSATPSIRHSRVTTSSMPNLTAANNPVQAGFLGDYMWIALDGWGQPNIVWADTRGLNGTVEEDIYFARMGENEQ
Ga0182037_1060254323300016404SoilTGCNDITLAEIRDPTAGKPKIKHRRITTSAMPNLTAANNPVQAGFLGDYMWITLDRWDRPNIVWADTRGLNGTVEEDVYFSRVDQED
Ga0182037_1073306313300016404SoilFTGCNDITLATISNPTAAAPSIKYTRVTTSSMPNLVIANNPIEAGFLGDYMWVTVGRHNRANVVWADTRGLNGAVEEDIYFATVP
Ga0134069_132358213300017654Grasslands SoilKDGTLWVAYYDRSYGTCESTGCNDITLARVTNAGSSSPAFAYTRLTTASMPNLVVANNPIQAGFLGDYMWVDLDSKGRPLVVWADTRGLDGTVEEDVYFARPIP
Ga0134069_132401423300017654Grasslands SoilAYYDRSYGNCEFTGCNDITLATVLNPTAASPAISYTRITTASMPNLVPSNNPLQAGFLGDYMWVDVDSTGRALVVWADTRGLDGTVEEDIYFARPLP
Ga0134112_1011098713300017656Grasslands SoilVAYYDRSYGSCETTGCNDITLAKITNSASSSRSFKYTRLTTDSMPNLVVANNPIQAGFLGDYMWVEIDSKGRPLVVWADTRGLDGTVEEDIYFARP
Ga0134083_1055199023300017659Grasslands SoilYIAYYDREYGNCETTGCNDITLATISKAATGSPKIKYQRITTASMPNLVVANDPIQAGFIGDYMWVSSDSDGNPLIAWADTRGLRGAVEEDIYAATP
Ga0184618_1047670423300018071Groundwater SedimentQYGNCEFSGCNDITVTKVTNPASASPSMSSSRLTTGSMPDLNTITNPVQAGFLGDYMWVATSGNTAYVVWADTRGMNGTVEEDLYFATTH
Ga0066655_1026817813300018431Grasslands SoilDCETTGCNDITLAGVSNPASAAPTVSYRRVTSSSMPNLTPTNNPLQAGFLGDYMWVAVDGNGWPNIVWADTRGLNGAVEEDVYFVRLPPQ
Ga0193733_118973313300020022SoilYYDRSYGNCEFTGCNDITLANVHNPSSNAPSVGHHRITTSSMPNLTAANNPVQEGFLGDYMWLAVDARGRANIVWADTRGLNGTVEEDVYFSRF
Ga0210399_1003804313300020581SoilETLWIAYYDRSYGNCEFSGCNDITAAAVHRSTSRRPSIDYTRVTTSSMPNLVVANNPAQAGFLGDYMWVTVDNRGRANIVWADTRGLNHTVEEDVYFAVVGGGD
Ga0210399_1109154313300020581SoilTANGRTLWVAYYDRSYGSCETSGCNDITLAAVKRPATGAPTVSYQRITTASMPNLVVANNPIEAGFLGDYMWLTVDAMGRPNIVWADTRGLHGTVEEDIYFARPPSGD
Ga0210408_1016166013300021178SoilPDGSKLYAAYYDRSYGNCESTGCNDITLATIRNPTSAIPSIRHSRVTTGSMPNLTAANNPVEAGFLGDYMWITLDVWGQPNIVWADTRGLNGSVEEDVYFARMGENQQ
Ga0210394_1135954013300021420SoilRSYGNCETTGCNDITLAAVKRPATGSATVSYHRITTASMPNLVVANNPIEAGFLGDYMWLTVDAKGRPNIVWADTRGLHGAVEEDIYFSRFSGDE
Ga0210392_1053052813300021475SoilITLATIRNPTSAIPSIRHSRVTTGSMPNLTAANNPVEAGFLGDYMWITLDVWGQPNIVWADTRGLNGSVEEDVYFARMGENQQ
Ga0210402_1142081813300021478SoilNDITLAAVKRPATGSATVSYHRITTASMPNLVVANNPIEAGFLGDYMWLTVDAKGRPNIVWADTRGLHGAVEEDIYFSRFSGDE
Ga0242656_113207513300022525SoilVSPDGKHLWIAYYDRHYGNCEFTGCNDITLADVTAPAKAAKSSEDGSKITYTRITTSSMPNLVPSNNPLEAGFLGDYMWVTVDAQGNPFIVWADT
Ga0242654_1026922423300022726SoilVTANGKTLWVAYYDRSYGNCETTGCNDITLAAVKRPATGSATVSYHRITTASMPNLVVANNPIEAGFLGDYMWLTVDAKGRPNIVWADTRGLHGAVEEDIYFSRFSGEE
Ga0222622_1047035813300022756Groundwater SedimentTTGCNDITMATVKNPASPSPTVDHMRITTSSMPNLVVANNPIQAGFLGDYMWVSTDLKGNPSLVWADTRGLGGTVEEDVYLAKPKD
Ga0247688_107940313300024186SoilVAYYDRSYGNCETSGCNDITLAAVKHPATGSATASYHRITTSSMPNLVVANDPIEAGFLGDYMWLTVDAKGRPNIVWADTRGLHGTVEEDIYFSRFSGDE
Ga0247664_106701313300024232SoilGCNDITLSTISKAATSSPTIKYQRITTGSMPNLVVANDPVEAGFIGDYMWASSDSHGNPLIAWADTRGLRGTVEEDIYAATP
Ga0247667_102241013300024290SoilAYYDRRYGNCELTGCNDITLSTISKAATSSPTIKYQRITTASMPNLVVANDPVEAGFIGDYMWASSDSHGNPLIAWADTRGLRGTVEEDIYAATP
Ga0247666_103760823300024323SoilYDRRYGNCELTGCNDITLSTISKAATSSPTIKYQRITTASMPNLVVANDPVEAGFIGDYMWASSDSHGNPLIAWADTRGLRGTVEEDIYAATP
Ga0207693_1106596713300025915Corn, Switchgrass And Miscanthus RhizosphereKLYAAYYDRSYGNCESTGCNDITLATIRHPTSAAPSIRHSRVTTGSMPNLTAANNPVEAGFLGDYMWITLDAWGQPNIVWADTRGLNGTVEEDIYFARMIGENEQ
Ga0207665_1047188413300025939Corn, Switchgrass And Miscanthus RhizosphereLWVAYYDRSYGNCETSGCNDITLAAVKHPATGSATASYHRITTSSMPNLVVANDPIEAGFLGDYMWLTVDAKGRPNIVWADTRGLHGTVEEDIYFSRFSGDE
Ga0209234_119871813300026295Grasslands SoilRHYGTCETDGCNDITMATVGGPASGSPSFTYQRLTTSSMPNLVPANNPVEAGFLGDYMWLSVDGGGHPLIVWADTRGLGGAVEEDVYFAKPTG
Ga0209154_110815313300026317SoilETTGCNDITLAKITNAASSSRSFKYTRLTTDSMPNLVVANNPIQAGFLGDYMWVDLDSQGRPLVVWADTRGLDGTVEEDIYFARPLP
Ga0209801_101467733300026326SoilTKDGTLFVAYYDRSYGSCETTGCNDITLAKITNAASSSRSFKYTRLTTDSMPNLVVANNPIQAGFLGDYMWVDLDSQGRPLVVWADTRGLDGTVEEDIYFARPLP
Ga0209377_128459313300026334SoilVTYYDRSYGNCEFTGCNDITLATISNPASATPSITYTRVTTSSMPNLVTANNPLQAGFLGDYMWVAVDGHGRANIVWADTRGLNGAVEEDIYFAVTK
Ga0209059_100117813300026527SoilVSLFGKNLWIAFYDRRYGNCETNGCNDITLATVGKAATSTPTFAYRRLTTSSMPNLVVANNPLQAGFLGDYMWVTVDNRGRANVVWADTRGLNQTVEEDVYFAVVGGGD
Ga0209160_127981623300026532SoilTTGCNDITLATVESAATTSPSIKYTRITTSSMPNLVPSNNPLQAGFLGDYMWVAVDSKGNPLIAWADTRGLNGTVEEDVYFANP
Ga0209376_110746213300026540SoilFYDRHYGNCEFTGCNDITLTAVRNAATASPKLSNQRLTTSSMPNLVVANNPLQAGFLGDYMWLAAPFNKAPYVVWADTRGRHGSVEEDIYFAR
Ga0209524_107091923300027521Forest SoilRSYGTCETSGCNDITLAKISRPSSVSARVSYTRVTTSSMPNLVVANNPIQAGFLGDYMWVAVDSQGHPHVVWADTRGRNGTVEEDVYYAKFGDQDDNDRVHGEFRIP
Ga0209023_1066315013300027870Freshwater And SedimentMPWSAVAPDGKKFYVAYYDRSYGSCETNGCNDITLATIEKAATGSPTIKYTRITTSSMPNLVPANNPLQAGFLGDYMWVATDSKGKPSIVWADTRGLGDTVEEDI
Ga0209068_1071230213300027894WatershedsSDLFVGYYDRSYGKCETTGCNDITLARISRPLSASARASYTRVTTSSMPNLVVANNPIQAGFLGDYMWVAVDAHGNAHVVWADTRGRNGTVEEDIYYAKFGDHDDHDEDRR
Ga0209382_1119861213300027909Populus RhizosphereLFVGYYDRSYGNCETTGCNDITMATVKNPASPTPNVDHTRITTSSMPNLVVANNPIQAGFLGDYMWVSTDLKGNPSLVWADTRGLGGTVEEDVYLAKPND
Ga0209859_101062313300027954Groundwater SandELDGCNDITLTKITNPATASPSISSTRITTSSMPNMVVANNPIQAGFLGDYMWVATDPKGRALIVWGDNRGQNGAVEQDIYFARTP
(restricted) Ga0233417_1043192413300028043SedimentGGKLWVAYYDRSYGNCEFDGCNDITVAGIDNAASPSPTIKFTRLTTGSMPNLTPANNPLQAGFLGDYMWVTVDNKGRPLVVWSDTRGLNGAVEEDIYFGTLP
Ga0137415_1104975713300028536Vadose Zone SoilVAQDGKKLYIAYYDRSYGTCEMSGCNDITLATIQDATTASPSIKYTRITTSSMPNLVPANNPLQAGFLGDYMWVSVDANGNPLITWADTRGLNGTVEEDIYFARP
Ga0307322_1012719213300028710SoilVGYYDRSYGNCETTGCNDITMATIRNPASPSPKIAYTRITTSSMPNLVVANNPIQAGFLGDYMWVSTDLKGRPSLVWADTRGLGGTVEEDIYLARPND
Ga0307312_1103623523300028828SoilGKTLWVGFYDRRYGNCEFSGCNDITLAQIGDPNSHPTFSYARLTTSSMPNLIPANNPVQAGFLGDYMWVATHGNSAPYVVWGDTRGRGGTVEEDIYFAR
Ga0308189_1032705023300031058SoilVSPDGRSLWIAYYDRSYGNCEFDGCNDITLAKIRVLSTVRSTTYTRITTASMPNLTPANNPAQAGFLGDYMWVTVDSTGRPHIVWADTRGLNNTVEEDIYYATVSP
Ga0170824_11385612813300031231Forest SoilYGNCEFTGCNDITLASVHNPWSNTPSVSHHRITTSSMPNLNATNNPVQDGFLGDYMWLAVDARGRANIVWADTRGLNGTVEEDVYFSRFSGAE
Ga0318528_1075423513300031561SoilLFAVYYDRSYGNCESTGCNDITLAEIRDPTSANPKIKHRRVTTSSMPNLTAANNPIQAGFLGDYMWITLDAWGRPNIVWADTRGLNGTVEEDVYFSRVGQGD
Ga0318572_1065945323300031681SoilGCNDITLAEIRDPTSAKPKIKHRRITTSSMPNLTAANNPVQAGFLGDYMWITLDKWDRPNIVWADTRGLNGTVEEDVYFSRVDQGD
Ga0307476_1131132513300031715Hardwood Forest SoilSKLYAAYYDRSYGNCEFTGCNDITLATIRNPTSTAPSIRHRRVTTGSMPNLTVANNPVEAGFLGDYMWITLDAWGRPNIVWADTRGLNGTVEEDVYFARVENED
Ga0307474_1096625213300031718Hardwood Forest SoilSYGNCETSGCNDITLAAVKRPATGAPTISYQRITTASMPNLVVANNPIEAGFLGDYMWLTVDAKGRPNIVWADTRGLHGAVEEDIYFARPSGNE
Ga0306917_1027870323300031719SoilAYYDRSYGDCEFTGCNDITLAEIRDPTAAKPKIKHRRITTSSMPNLTAANNPVQAGFLGDYMWITLDRWDRPNIVWADTRGLNGTVEEDVYFSRVDQED
Ga0318554_1053827023300031765SoilYYDRSYGDCEFTGCNDITLAEIRDPTAAKPKIKHRRITTSSMPNLTAANNPVQAGFLGDYMWITLDRWDRPNIVWADTRGLNGTVEEDVYFSRVDQED
Ga0318509_1022991013300031768SoilYGNCESTGCNDITLATIRNPTSATPSIRHSRVTTSSMPNLTAANNPVQAGFLGDYMWIALDGWGQPNIVWADTRGLNGTVEEDIYFARMGENEQ
Ga0318498_1051102313300031778SoilSYGDCEFTGCNDITLAEIRDPTAAKPKIKHRRITTSSMPNLTAANNPVQAGFLGDYMWITLDRWDRPNIVWADTRGLNGTVEEDVYFSRVDQGD
Ga0318548_1036577613300031793SoilTGCNDITLAEIRDPTAAKPKIKHRRITTSSMPNLTAANNPVQAGFLGDYMWITLDRWDRPNIVWADTRGLNGTVEEDVYFSRVDQGD
Ga0318503_1013239323300031794SoilPDGSKLFAAYYDRSYGDCEFTGCNDITLAEIRDPTSAKPKIKHRRITTSSMPNLTAANNPVQAGFLGDYMWITLDKWDRPNIVWADTRGLNGTVEEDVYFSRVDQGD
Ga0307473_1027746013300031820Hardwood Forest SoilVIRAASKLYAAYYDRSFGNCEFTGCNDITLATIRNPTSATASIRHRRVTTSSMPNFTAANNPVQAGFLGDYRWITLDAWGRPNIVWADTRGLNGTVEEDVYFARVGENED
Ga0307473_1073376513300031820Hardwood Forest SoilTLARVTNPASASPKVSYDRITTSSMPNLVVSNNPLEAGFLGDYMYLAVDAKGNPNIVWSDTRGLGGTVEEDIYFARVPGNPQNGQ
Ga0310917_1058008613300031833SoilWSVVSTDGSKLFAVYYDRSYGNCESTGCNDITLAEIRDPTSANPKIKHRRVTTSSMPNLTAANNPIQAGFLGDYMWITLDAWGRPNIVWADTRGLNGTVEEDVYFSRVGQGD
Ga0318520_1097773713300031897SoilYDRSYGDCEFTGCNDITLAEIRDPTSAKPKIKHRRITTSSMPNLTAANNPVQAGFLGDYMWITLDKWDRPNIVWADTRGLNGTVEEDVYFSRVDQGD
Ga0306926_1268286413300031954SoilVVSPDGSKLFAAYYDRSYGDCEFTGCNDITLAEIRDPTAAKPKIKHRRITTSSMPNLTAANNPVQAGFLGDYMWITLDRWDRPNIVWADTRGLNGTVEEDVYFSRVDQED
Ga0307479_1137228923300031962Hardwood Forest SoilDRSYGNCEFTGCNDITAAAVRRPASSRPSVDYTRVTTSSMPNLVVANNPAEAGFLGDYMWVTVDNRGRANVVWADTRGLNQTVEEDVYFAVVGGGD
Ga0318562_1049029313300032008SoilITLAEIRDPTSAKPKIKHRRITTSSMPNLTAANNPVQAGFLGDYMWITLDKWDRPNIVWADTRGLNGTVEEDVYFSRVDQGD
Ga0318558_1014397723300032044SoilVVSPDGSKLFAAYYDRSYGDCEFTGCNDITLAEIRDPTAAKPKIKHRRITTSSMPNLTAANNPVQAGFLGDYMWITLDRWDRPNIVWADTRGLNGTVEEDVYFSRVDQGD
Ga0315268_1162123323300032173SedimentVAPDGKKYYVAYYDRSYGSCETSGCNDITLATIEKAATGSPKIKYTRITTSSMPNLTPATNPIQAGFLGDYMWVATDSKGKPSIVWADTRGLGGTVEEDIYFATVK
Ga0315276_1187510213300032177SedimentRSYGSCETTGCNDITLATIEKAATGSPKIKYTRVTTSSMPNLTPANNPLQAGFLGDYMWVAVDPKGQPHVVWSDTRGQNGAVEEDSYYAQPK
Ga0307471_10099142313300032180Hardwood Forest SoilYGNCEFTGCNDITAAEVHRPASNRASVGYTRVTTSSMPNLVVANNPAQAGFLGDYMWVTVDNRGRANVVWADTRGLNQTVEEDVYFAVVGGGD
Ga0307471_10146317413300032180Hardwood Forest SoilGNCEFTGCNDITAAEVHRPASNRASVGYTRVTTSSMPNLVVANNPAQAGFLGDYMWVTVDNRGRANVVWADTRGLNQTVEEDVYFAVVGGGD
Ga0315271_1096021023300032256SedimentAYYDRSYGSCETDGCNDITLATIEKAATGSPKIKYTRVTTSSMPNLVPANNPIQAGFLGDYMWVAVDPKGQPHVVWSDTRGQDGAVEEDIYYARP
Ga0326729_106222313300033432Peat SoilLWVAFYDRSYGSCETTGCNDITLARVSRAATKSPSFAYTRLTTSSMPNLLPSNDPLEAGFLGDYMWVTVDNRGNPYVVWADTRGQDGTVEEDVYLARP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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