NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F045904

Metagenome / Metatranscriptome Family F045904

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F045904
Family Type Metagenome / Metatranscriptome
Number of Sequences 152
Average Sequence Length 61 residues
Representative Sequence TPELSQNLDDYDGRWVAVRDGTVVAHGDDEESLRADPAVRDGDLVYPIGDPPSGFYLINV
Number of Associated Samples 109
Number of Associated Scaffolds 152

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 86.84 %
% of genes near scaffold ends (potentially truncated) 36.84 %
% of genes from short scaffolds (< 2000 bps) 92.11 %
Associated GOLD sequencing projects 104
AlphaFold2 3D model prediction Yes
3D model pTM-score0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (74.342 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(13.816 % of family members)
Environment Ontology (ENVO) Unclassified
(27.632 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(51.316 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 10.23%    β-sheet: 17.05%    Coil/Unstructured: 72.73%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.70
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 152 Family Scaffolds
PF05199GMC_oxred_C 67.11
PF13115YtkA 3.29
PF02653BPD_transp_2 3.29
PF13618Gluconate_2-dh3 1.97
PF00196GerE 1.32
PF06723MreB_Mbl 1.32
PF07883Cupin_2 1.32
PF02627CMD 0.66
PF00582Usp 0.66
PF00496SBP_bac_5 0.66
PF00293NUDIX 0.66
PF10027DUF2269 0.66
PF00118Cpn60_TCP1 0.66
PF03404Mo-co_dimer 0.66
PF00356LacI 0.66
PF00160Pro_isomerase 0.66
PF00532Peripla_BP_1 0.66
PF05231MASE1 0.66
PF00441Acyl-CoA_dh_1 0.66
PF13231PMT_2 0.66
PF07366SnoaL 0.66
PF13185GAF_2 0.66

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 152 Family Scaffolds
COG2303Choline dehydrogenase or related flavoproteinLipid transport and metabolism [I] 67.11
COG1077Cell shape-determining ATPase MreB, actin-like superfamilyCell cycle control, cell division, chromosome partitioning [D] 1.32
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 0.66
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 0.66
COG0642Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.66
COG0652Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin familyPosttranslational modification, protein turnover, chaperones [O] 0.66
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.66
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 0.66
COG3447Integral membrane sensor domain MASE1Signal transduction mechanisms [T] 0.66
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.66

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms74.34 %
UnclassifiedrootN/A25.66 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2199352024|deeps__Contig_143354All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300000956|JGI10216J12902_101331362All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300000956|JGI10216J12902_102442682All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300000956|JGI10216J12902_118438839Not Available777Open in IMG/M
3300001213|JGIcombinedJ13530_108568355Not Available527Open in IMG/M
3300001686|C688J18823_10678019Not Available656Open in IMG/M
3300002568|C688J35102_119420543All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300004081|Ga0063454_101258198Not Available616Open in IMG/M
3300004479|Ga0062595_100052079All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1880Open in IMG/M
3300004799|Ga0058863_11923718All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei2552Open in IMG/M
3300004800|Ga0058861_10179517Not Available509Open in IMG/M
3300004800|Ga0058861_11742569All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300004803|Ga0058862_12601089All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300004803|Ga0058862_12700048All Organisms → cellular organisms → Bacteria1287Open in IMG/M
3300005167|Ga0066672_10887980Not Available553Open in IMG/M
3300005171|Ga0066677_10685568All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300005178|Ga0066688_10173894Not Available1358Open in IMG/M
3300005179|Ga0066684_10851455All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300005187|Ga0066675_10294970All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1172Open in IMG/M
3300005329|Ga0070683_100435380All Organisms → cellular organisms → Bacteria1251Open in IMG/M
3300005329|Ga0070683_102218922Not Available527Open in IMG/M
3300005435|Ga0070714_100058879All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3293Open in IMG/M
3300005437|Ga0070710_11183549Not Available564Open in IMG/M
3300005466|Ga0070685_10598218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales793Open in IMG/M
3300005467|Ga0070706_101175429All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300005471|Ga0070698_101446409Not Available638Open in IMG/M
3300005529|Ga0070741_10007424All Organisms → cellular organisms → Bacteria22673Open in IMG/M
3300005529|Ga0070741_10012236All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria15578Open in IMG/M
3300005529|Ga0070741_10088112All Organisms → cellular organisms → Bacteria3365Open in IMG/M
3300005529|Ga0070741_11482671Not Available560Open in IMG/M
3300005530|Ga0070679_101402541All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300005553|Ga0066695_10816546Not Available537Open in IMG/M
3300005560|Ga0066670_10330227All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300005561|Ga0066699_10926418All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300005561|Ga0066699_11021328Not Available572Open in IMG/M
3300005587|Ga0066654_10110621All Organisms → cellular organisms → Bacteria1343Open in IMG/M
3300005598|Ga0066706_10614079All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300005764|Ga0066903_100714348All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1770Open in IMG/M
3300005764|Ga0066903_101537934All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1258Open in IMG/M
3300005764|Ga0066903_101821979All Organisms → cellular organisms → Bacteria1163Open in IMG/M
3300005764|Ga0066903_104866745All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300006032|Ga0066696_10607635All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300006032|Ga0066696_10747273All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300006046|Ga0066652_101666374All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300006175|Ga0070712_100914185All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300006237|Ga0097621_101023529All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300006794|Ga0066658_10186829All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300006794|Ga0066658_10202924All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1049Open in IMG/M
3300006797|Ga0066659_10670625All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300006806|Ga0079220_10842452All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300006854|Ga0075425_100980169All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300006904|Ga0075424_102188609Not Available582Open in IMG/M
3300009012|Ga0066710_100842364All Organisms → cellular organisms → Bacteria1408Open in IMG/M
3300009137|Ga0066709_100217890All Organisms → cellular organisms → Bacteria2524Open in IMG/M
3300009137|Ga0066709_101553093All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium951Open in IMG/M
3300009137|Ga0066709_103084767Not Available610Open in IMG/M
3300009789|Ga0126307_10166959Not Available1764Open in IMG/M
3300009840|Ga0126313_10565296Not Available914Open in IMG/M
3300010039|Ga0126309_10658639Not Available667Open in IMG/M
3300010044|Ga0126310_10638007All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300010047|Ga0126382_10237655All Organisms → cellular organisms → Bacteria1325Open in IMG/M
3300010102|Ga0127453_1085740All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300010141|Ga0127499_1120826All Organisms → cellular organisms → Bacteria1310Open in IMG/M
3300010147|Ga0126319_1215584All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4475Open in IMG/M
3300010147|Ga0126319_1375884All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300010147|Ga0126319_1385646All Organisms → cellular organisms → Bacteria1819Open in IMG/M
3300010147|Ga0126319_1518246Not Available871Open in IMG/M
3300010154|Ga0127503_10133177All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3107Open in IMG/M
3300010337|Ga0134062_10483079All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300010371|Ga0134125_13142513All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium500Open in IMG/M
3300010373|Ga0134128_11026052All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria912Open in IMG/M
3300010398|Ga0126383_11567216All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300010858|Ga0126345_1050995Not Available543Open in IMG/M
3300010865|Ga0126346_1357319All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300012199|Ga0137383_11209266All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi543Open in IMG/M
3300012200|Ga0137382_10456530All Organisms → cellular organisms → Bacteria905Open in IMG/M
3300012202|Ga0137363_10761789All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300012205|Ga0137362_11553708All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300012206|Ga0137380_11636044Not Available528Open in IMG/M
3300012208|Ga0137376_10792830All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300012208|Ga0137376_11491982All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Planococcaceae → Ureibacillus → Ureibacillus acetophenoni567Open in IMG/M
3300012210|Ga0137378_10972785All Organisms → cellular organisms → Bacteria762Open in IMG/M
3300012212|Ga0150985_103699314All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300012212|Ga0150985_105305021All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300012212|Ga0150985_107543709All Organisms → cellular organisms → Bacteria1670Open in IMG/M
3300012212|Ga0150985_107940275All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300012212|Ga0150985_110880336All Organisms → cellular organisms → Bacteria1458Open in IMG/M
3300012212|Ga0150985_112940183All Organisms → cellular organisms → Bacteria1091Open in IMG/M
3300012212|Ga0150985_113087611All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300012212|Ga0150985_114736098All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300012212|Ga0150985_116166801Not Available590Open in IMG/M
3300012285|Ga0137370_10626979All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300012362|Ga0137361_10259581All Organisms → cellular organisms → Bacteria1584Open in IMG/M
3300012395|Ga0134044_1263846All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300012396|Ga0134057_1281237Not Available501Open in IMG/M
3300012401|Ga0134055_1197786All Organisms → cellular organisms → Bacteria898Open in IMG/M
3300012406|Ga0134053_1281528All Organisms → cellular organisms → Bacteria1340Open in IMG/M
3300012469|Ga0150984_100764769All Organisms → cellular organisms → Bacteria769Open in IMG/M
3300012469|Ga0150984_103639491Not Available528Open in IMG/M
3300012469|Ga0150984_104519351All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1263Open in IMG/M
3300012469|Ga0150984_107061835Not Available587Open in IMG/M
3300012469|Ga0150984_107939542All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300012469|Ga0150984_108542987All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300012469|Ga0150984_115787393All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300012469|Ga0150984_118394947All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300012479|Ga0157348_1022024All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300012582|Ga0137358_10259933All Organisms → cellular organisms → Bacteria1181Open in IMG/M
3300012923|Ga0137359_10064600All Organisms → cellular organisms → Bacteria3193Open in IMG/M
3300012958|Ga0164299_10671857All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300012958|Ga0164299_11461923Not Available531Open in IMG/M
3300012960|Ga0164301_10240313All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1182Open in IMG/M
3300012971|Ga0126369_11933897All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria678Open in IMG/M
3300012986|Ga0164304_10258716All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1171Open in IMG/M
3300014497|Ga0182008_10487653All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300015077|Ga0173483_10681550Not Available577Open in IMG/M
3300015265|Ga0182005_1204569Not Available595Open in IMG/M
3300015371|Ga0132258_10459197All Organisms → cellular organisms → Bacteria3177Open in IMG/M
3300015371|Ga0132258_10525342All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2963Open in IMG/M
3300015372|Ga0132256_103384309All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300018431|Ga0066655_10613218All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300018433|Ga0066667_10167417All Organisms → cellular organisms → Bacteria1574Open in IMG/M
3300018433|Ga0066667_10389163All Organisms → cellular organisms → Bacteria1123Open in IMG/M
3300018465|Ga0190269_11063995All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300018482|Ga0066669_10514502All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300018482|Ga0066669_11761036All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300020069|Ga0197907_11491091Not Available649Open in IMG/M
3300020078|Ga0206352_11079623All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300021363|Ga0193699_10020001All Organisms → cellular organisms → Bacteria2441Open in IMG/M
3300021445|Ga0182009_10515401All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300022467|Ga0224712_10333891All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300024055|Ga0247794_10230921All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300025915|Ga0207693_10311786All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1232Open in IMG/M
3300025916|Ga0207663_11459972Not Available551Open in IMG/M
3300025917|Ga0207660_10720753Not Available814Open in IMG/M
3300025921|Ga0207652_10189324All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1851Open in IMG/M
3300025944|Ga0207661_12059085Not Available517Open in IMG/M
3300026300|Ga0209027_1274411Not Available542Open in IMG/M
3300026550|Ga0209474_10188168Not Available1323Open in IMG/M
3300026550|Ga0209474_10366865Not Available787Open in IMG/M
3300028707|Ga0307291_1012379All Organisms → cellular organisms → Bacteria1873Open in IMG/M
3300028796|Ga0307287_10376469Not Available535Open in IMG/M
3300028802|Ga0307503_10412744Not Available708Open in IMG/M
3300030336|Ga0247826_10419158All Organisms → cellular organisms → Bacteria994Open in IMG/M
3300031058|Ga0308189_10344892All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300031091|Ga0308201_10021071All Organisms → cellular organisms → Bacteria1367Open in IMG/M
3300031091|Ga0308201_10093027All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300031091|Ga0308201_10095536All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300031091|Ga0308201_10253332All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300031720|Ga0307469_10758708All Organisms → cellular organisms → Bacteria886Open in IMG/M
3300032770|Ga0335085_10492926All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1400Open in IMG/M
3300032896|Ga0335075_11066051Not Available717Open in IMG/M
3300034384|Ga0372946_0351904Not Available715Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil13.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.87%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.89%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil6.58%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere5.92%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere5.26%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.61%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.95%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.95%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil3.29%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated3.29%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.63%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.63%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.63%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.63%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.97%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.32%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.32%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.32%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.32%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.32%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.32%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil1.32%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.66%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.66%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.66%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.66%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.66%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.66%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.66%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.66%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.66%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2199352024Bare-fallow DEEP SOILEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004799Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300004800Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300004803Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010102Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010141Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010147Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010858Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010865Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012395Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012396Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012401Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012406Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012479Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.yng.030610EnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015265Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021363Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300028707Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031091Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300034384Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
deeps_026224602199352024SoilLSTEPEGLPQELDHYDGRWVAVRAGTIVAHADTEEALRADPAVREDDLCSPVGDPPSGFYMINV
JGI10216J12902_10133136223300000956SoilLSKQEHQQATETDLSRYDGQWVAVRDGSVIANASDEGALRADPRVRQSDDVYPIGDPPAGFYLINV*
JGI10216J12902_10244268213300000956SoilLSEQLHQQATELDLSRYDGQWVAVRDGRIIANAADEGTLRADPRLCQGDDVYPIGDPPAGFYMINV*
JGI10216J12902_11843883923300000956SoilMTATNGLPQELDAYDGRWVAVRDGVVVAHGSDEETLRADSSVRDDDHVYPIGDPPSGFYLINV*
JGIcombinedJ13530_10856835513300001213WetlandNELPANDLAHYDGLWVAVRGGHVVAHAPDEETLRADPAVRGQDDVYPIGDPPSGFYMVNV
C688J18823_1067801933300001686SoilNLDDYDGRWVAVRDGTVVAHGDDEESLRADPAVRDGDLVYPIGDPPSGFYLINV*
C688J35102_11942054313300002568SoilMSSTPELSQNLDDYDGRWVAVRDGTVVAHGDDEESLRADPAVRDGDLVYPIGDPPSGFYLINV*
Ga0063454_10125819823300004081SoilTPELSQNLDDYDGRWVAVRDGTVVAHGDDEESLRADPAVRDGDLVYPIGDPPSGFYLINV
Ga0062595_10005207923300004479SoilMNTAFEPLSQNLDDYDGRWVAVRDGRVVAHADDEESLRADEAVRDGDLVYPIGDPPSGFYLINV*
Ga0058863_1192371813300004799Host-AssociatedMSHDLDAFDGKWVAVRDGRVVAHAEDEQALRADPAVRDDDDVYPIGDPPSGFYMINV*
Ga0058861_1017951723300004800Host-AssociatedMSHDLDAFDGKWVAVRDGRVVAHAEDEQALRADPAVRDDDDVYPIGDPPSGFYMI
Ga0058861_1174256913300004800Host-AssociatedMSPDLEPYDGRWVAVRDGEVVAHAADEQELRGDPAVRESDDVYPVGEPPSGFYMIN
Ga0058862_1260108913300004803Host-AssociatedMSPNLEPYDGRWVAVRDGEVVAHAADEQELRGDPAVRESDDVYPVGEPPSGFYMINV*
Ga0058862_1270004823300004803Host-AssociatedMSHDLDRYDGRWVAVREGRVVADAEDEQTLRADPEVRDGDDVYPIGEPPSGFYMINV*
Ga0066672_1088798023300005167SoilMKARSEPLSQNLDDYDGRWVAVRDGQVVAHAGDEESLRADAAVRDGDLFFPIGDPPSGFYLINV*
Ga0066677_1068556823300005171SoilMTARPEPLSQNLDDYDGRWVAVRGGTVVAHAADEESLRADDAVRDGDLLFPIG
Ga0066688_1017389443300005178SoilMKTTPDLDQFDGKWVAVRGNKVVAHADDEETLRAHPAVRDGDDVYPIGHPVTGWYMINV*
Ga0066684_1085145513300005179SoilYDGRWVAVRDGQVVAHAGDEESLRADAAVRDGDLFFPIGDPPSGFYLINV*
Ga0066675_1029497023300005187SoilMTAAPEPLSQNLDDYDGRWVAVRDGTVVAHAADEESLRADVAVRDGDLLFPIGDPPSGFYLINV*
Ga0070683_10043538023300005329Corn RhizosphereMNQNPDLGNYDGKWVAVRGPKVVAHADDEETLRAHPAVREDDDVYPVGDPPSGFYMINV*
Ga0070683_10221892213300005329Corn RhizosphereMSHDLDRYDGRWVAVRDGRVVADAEDEQTLRADPEVRDGDDVYPIGEPPSGFYMINV*
Ga0070714_10005887933300005435Agricultural SoilLSTRQHQLATGPDLSPYDGQWVAVRNGKVIANALDEGALRADPNVREGDDVYPIGDPPSGFYLINV*
Ga0070710_1118354923300005437Corn, Switchgrass And Miscanthus RhizosphereMNQKPDLDRYDGKWVAVRGAKVVAHADDEDTLRAHPAVREDDDFYPVGDPPSGFYMINV*
Ga0070685_1059821823300005466Switchgrass RhizosphereMNQNPDLERYDGKWVAVRGPKVVAHADDEETLRAHPAVRDDDDVSPVGDPPSGFYMINV*
Ga0070706_10117542923300005467Corn, Switchgrass And Miscanthus RhizosphereLSEPEQQQAAEHDLSRYDGQWVAVRDGKVVAHAGDEETLRADPTVQEDDDIYPIGDPPSG
Ga0070698_10144640923300005471Corn, Switchgrass And Miscanthus RhizosphereVSHDLDQYDGQWVAVRDGVVVAHAPDEETLRADPKVKDGDLVYPIGDPPSGFYMINV*
Ga0070741_10007424213300005529Surface SoilMSTEQRPSPELEPYDGRWVAVRDGAVVAHAADEASLRADPAVREGDLVFPVGDPPSGFYLVNV*
Ga0070741_1001223623300005529Surface SoilMSTAHEQLSQDLDDYDGRWVAVRNGEVVAHAADEESLRRDEAVRETDLLYPIGDPPSGFYLINV*
Ga0070741_1008811223300005529Surface SoilVTEPAEPLSQNLDDYDGRWIAVRDGVIVAAGDDEESVRADGAVRDGDLVYPIGDPPSGFYLINV*
Ga0070741_1148267123300005529Surface SoilMSERPDLEPYEGRWVAVRGAEVVADAEDEATLRAHPDVRATDDVYPVGEPPSGFYLVNV*
Ga0070679_10140254123300005530Corn RhizosphereMSPDLEPYDGRWVAVRDGEVVAHAADEQELRGDPAVRESDDVYPVGEPPSGFYMINV*
Ga0066695_1081654623300005553SoilVSGAPELSQNLDDYGGRWVAVRDGKVVAHGDDEESVRADPAVRDGDLVYPIGDPPSGFYLINV*
Ga0066670_1033022723300005560SoilMNEKPDLDRYDGKWVAVRGPNVVAHADDEETLRAHPAVREDDDFYPVGDPPSGFYMINV*
Ga0066699_1092641813300005561SoilMTAAPEPLSQNLDDYDGRWVAVRAGQVVAHAGDEESLRADEAVRDGDLLFPIGDPPSGFYLINV*
Ga0066699_1102132823300005561SoilMKATPEPLSQNLDDYDGRWVAVRDGQVVACAGDEESLRADAAVRDGDLVFPIGDPPSGFYLINV*
Ga0066654_1011062123300005587SoilMNEKPDLDRYDGKWVAVRGPKVVAHADDEETLRAHPAVREDDDFYPVGDPPSGFYMINV*
Ga0066706_1061407913300005598SoilMKARSEPLSQNLDDYDGRWVAVRDGQVVAHAGDEESLRADAAVRDGDLVFPIGDPPSGFYLINV
Ga0066903_10071434823300005764Tropical Forest SoilDGRWVAVRNGEVVAHAEDEETLRADPAVRDGDLLYPIGDPPSGFYLINV*
Ga0066903_10153793423300005764Tropical Forest SoilVTDKKAQLSQNLDDYDGRWVAVRNGEIVAHAEDEEMLRADPAVRDGDLLYPIGDPPSGFYLINV*
Ga0066903_10182197923300005764Tropical Forest SoilVTDEKAQLSQNLDDYDGRWVAVRNGEVVAHAEDEETLRADPAVRDGDLLYPIGD
Ga0066903_10486674523300005764Tropical Forest SoilVTDEKAQLSQNLDDYDGRWVAVRNGEVVAHAEDEETLRADPAVRDGDLLYPIGDPPSGFYLINV*
Ga0066696_1060763513300006032SoilDGRQPRMKAPSEQLSQNLDDYDGRWVAVRSGQVVAHAADEDALRADAAVRDGDLLFPIGDPPSGFYLINV*
Ga0066696_1074727313300006032SoilMTAAPEPLSQNLDDYDGRWVAVRDGTVVAHAADEESLRADVAVRDGDLLFPIG
Ga0066652_10166637423300006046SoilMRTQPDLDDFDGKWVAIRGNKVVAHADDEETVRAHPAVREDDDVYPIGHPVTGWYMINV*
Ga0070712_10091418523300006175Corn, Switchgrass And Miscanthus RhizosphereVTSHNLDQYDGQWVAVRDGEVVAHAPDEETLRADPKVRESDLVYPIGEPPSGFYMINV*
Ga0097621_10102352923300006237Miscanthus RhizosphereMNQNPDLERYDGKWVAVRGPKVVAHADDEETLRAHPAVRDDDDVYPVGDPPSGFYMINV*
Ga0066658_1018682923300006794SoilMNEKPDLDRYDGKWVAVRGPKVVAHADDEETLRAHPAVREDDDFYPVGDPPSGF
Ga0066658_1020292423300006794SoilMKATPEPLSQNLDDYDGRWVAVRDGQVVAHAGDEESLRADAAVRDGDLVFPIGDPPSGFYLINV*
Ga0066659_1067062523300006797SoilMTATREPLSQNLDDYDGRWVAVREGRVVAHADDEGTLRADPAVREGDLVYPIGDPPSGFYLINV*
Ga0079220_1084245223300006806Agricultural SoilMNEKADLEGYDGKWVAVRGPKIVAHADDEETLRAHPAVRDDDDFYPVGDPPSGFYMINV*
Ga0075425_10098016923300006854Populus RhizosphereMTGPKKAKLSQRLDDYDGRWIAVRQGLVVAHATDEPTLRADPAVRKGDLVYPIGEPPSGFYLINV*
Ga0075424_10218860923300006904Populus RhizosphereMNQNPDLGKYDGKWVAVRGPKVVAHADDEETLRAHPAVREDDDVYPVGDPPSGFYMINV*
Ga0066710_10084236423300009012Grasslands SoilMKTTPDLDQFDGKWVAVRGNKVVAHADDEETLRAHPAVRDGDDVYPIGHPVTGWYMINV
Ga0066709_10021789033300009137Grasslands SoilMSATPELSQNLDDYDGRWVAVRDGQVVAHAGDEESLRADAAVRDGDLFFPIGDPPSGFYLINV*
Ga0066709_10155309313300009137Grasslands SoilQVGREPRMTAAPEPLSQNLDDYDGRWVAVRDGTVVAHAADEESLRADVAVRDGDLLFPIGDPPSGFYLINV*
Ga0066709_10308476713300009137Grasslands SoilGQSRMKATPEPLSQNLDDYDGRWVAVRDGQVVAHADDEQSLRADAAVRDSDLLFPIGDPPSGFYLINV*
Ga0126307_1016695933300009789Serpentine SoilMNQNPDLERYDGKWVAVRGPKVVAHAEDEETLRAHPAVREDDDVYPVGDPPSGFYMINV*
Ga0126313_1056529633300009840Serpentine SoilMNQNPDLERYDGKWVAVRGPKVVAQAEDEETLRAHPAVREDDDVYPVGEPPSGFYMINV*
Ga0126309_1065863923300010039Serpentine SoilMNENPDLERYDGKWVAIRGPKVVAHADDEETLRAHPAVREDDDVYPVGDPPSGFYMINV*
Ga0126310_1063800713300010044Serpentine SoilMNQNPDLEQYDNKWVAVRGPKVVAHADDEETLRAHPAVRENDDIYPVGDPPS
Ga0126382_1023765523300010047Tropical Forest SoilMTDETAQLSQNLDDYDGRWVAVRNGEVVAHAEDEETLRADPAVRDGDLLYPIGDPPSGFYLINV*
Ga0127453_108574023300010102Grasslands SoilMNEKPDLDRYDGKWVAVRGPKVVAHADDEETLRAHPAVREDDDFYPVGNPPS
Ga0127499_112082623300010141Grasslands SoilMNEKPNLDRYDGKWVAVRGPNVVAHADDEETLRAHPAVREDDDFYPVGDPPSGFYMINV*
Ga0126319_121558433300010147SoilMNAANHRPTEPLSQELDDYDGRWVAVRDGVLVSHAADEETLRRDPVCRDGDLCYPIGDPVTGFYMINV*
Ga0126319_137588413300010147SoilVSSTPELSQNLDDYDGRWVAVRDGTVVAHGDGEESLRADPAVRDGDLVYPIGDPPS
Ga0126319_138564623300010147SoilMNAANHGTPESLSQELDDYDGRWVAVRDGVVVAHASDEETLRREHVNRDGDLCFPIGDPVTGFYMINV*
Ga0126319_151824623300010147SoilMSDDLGQYEGKWVAVRDGKVVAHSPDEETLRADPNVRDGDDIYPVGDPPSGFYMIN
Ga0127503_1013317743300010154SoilMNTASDHSAEPLSQHLDEYEGEWVAVRNGFVVAHASDEETLRRDPVVRDGDLIYPIGDPPSGFYLINV*
Ga0134062_1048307923300010337Grasslands SoilMKARSEPLSQNLDDYDGRWVAVRDGQVVSHAGDEESLRADAAVRDGDLFFPIGDPPSGFYLINV*
Ga0134125_1314251313300010371Terrestrial SoilDHSAEPLSQRLEDYEGDWVAVRNGSVVAHASDEETLRRDPVVRDGDLVYPIGDPPSGFYLINV*
Ga0134128_1102605213300010373Terrestrial SoilDGRWVAVRDGRVVAHADDEESLRADEAVRDGDLVYPIGDPPSGFYLINV*
Ga0126383_1156721623300010398Tropical Forest SoilVTDETAQLSQDLDDYDGRWVAVRNGEVVAHAEDEETLRADPAVRDGDLLYPIGDPPSGFYLINV*
Ga0126345_105099513300010858Boreal Forest SoilVSTRGHTETEPPGLSQNLDDYDGSWVAVRDGTIVAHGESQEAVRADPSYEEGDLVYPIGEPPSGFYLINV*
Ga0126346_135731913300010865Boreal Forest SoilVSTRGHTETEPPGLSQNLDDYDGSWVAVRDGTIVAHGESQEAVLADPSYEEGDLVYPIGDPPSGFYLINV*
Ga0137383_1120926623300012199Vadose Zone SoilMKATPEPLSQNLDDYDGRWVAVRDGQVVAHAGDEESLRAEPAVRDGDLVVPIGDPPSGFYLINV*
Ga0137382_1045653013300012200Vadose Zone SoilVSDAAELSQNLDAYDGRWVAVRDGKVVAHGDDEESLRADPAVRDGDLVYPIGDPPSGFYLINV*
Ga0137363_1076178923300012202Vadose Zone SoilVSHDLDQYDGQWVAVRDGVVVAHAPDEETLRADPKVKEGDLVYPIGDPPSGF
Ga0137362_1155370823300012205Vadose Zone SoilVSHDLDQYDGQWVAVRDGVVVAHAPDEETLRADPKVKEGDLVYPIGDPPSGFYMINV*
Ga0137380_1163604423300012206Vadose Zone SoilMKTTPDLDRFDGKWVAIRGNKVVAHADDEETLRDHPAVRDGDDVYPIGHLVTGWYMINV*
Ga0137376_1079283023300012208Vadose Zone SoilVSSPAKTLSQSLDDYEGGWVAVRDGEVIAHAPDEQTLRSDPAVREGDLVYPIGEPPSGFYLINV*
Ga0137376_1149198223300012208Vadose Zone SoilMSTAPELSQELDDYDGRWVAMRDGHVVAHAEDEEALRREPAMRHGDLCFPIGDPPTGFYMINV*
Ga0137378_1097278513300012210Vadose Zone SoilTPEPLSQNLDDYDGNWVALRDGQVVAHAGDEESLRADAAVRDGDLLFPIGDPPSGFYLINV*
Ga0150985_10369931423300012212Avena Fatua RhizosphereMSIVGKLSQNLDHYDGRWVAVRDGLVVAHGDDEDALRADPAVKEGDLLYPIGEPPAGFYMVNV*
Ga0150985_10530502113300012212Avena Fatua RhizosphereVEGASYDSPPEPLSQNLDDYDGRWVAVRDGQVVAHGADEQTVRGDRAVREGDLVFPIGDPPSGFYLINV
Ga0150985_10754370913300012212Avena Fatua RhizosphereMTLDLAPYENQWVAVRGEEVVASAADEQSLRADPAVQDGDDVYPVGEPPSGFYLQ
Ga0150985_10794027523300012212Avena Fatua RhizosphereVQHSQNLDDYDGRWVAVREGRVVAHAHDEQTLRSDPAVREGDLVYPIGEPAAGFYMINV*
Ga0150985_11088033613300012212Avena Fatua RhizosphereLSTPEHGEPEQAAELDPHDLSNFDGEWVAVRDGKVVAHSPDEETLRADPNVQDGDDIYPVGDPPSGFYMINV*
Ga0150985_11294018313300012212Avena Fatua RhizosphereMTPDLEPYDGKWVAVRGSRVVAHAEDEETLRSHPLVRETDDVYPVGDPPSGFYMINV*
Ga0150985_11308761123300012212Avena Fatua RhizosphereMNEQPDLEPYDGKWVAVRGSEVVAHADDEESLRAHPAVRGTDDVYPVGEPPSGFYLINV*
Ga0150985_11473609823300012212Avena Fatua RhizosphereMNQSPDLEPYDGKWVAVRGPKVVAHADDEETLRAHPAVRENDDVYPVGDPPSGFYMI
Ga0150985_11616680113300012212Avena Fatua RhizosphereMNQSPDLERYDGKWVAVRGPKVVAHADDEETLRAHPAVREDDDVYPVGDPPSGFYMINV*
Ga0137370_1062697923300012285Vadose Zone SoilMKARSEPLSQNLDDYDGRWVAVRDGQVVAHAGDEESLRADAAVRDGDLVFPIGDPPSGFYLINV*
Ga0137361_1025958123300012362Vadose Zone SoilMSEAAPLSQNLDDYDGRWVAMRAGAVVACGDDEETVRSDPNVRDGDLVYPIGLPPSGFYLLNV*
Ga0134044_126384613300012395Grasslands SoilMSSTPELSQNLDDYDGRWVAVRDGTVVAHGDDEESLRADPAVRDDDLVYPIGDPPSGFYLINV
Ga0134057_128123723300012396Grasslands SoilMSSTPELSQNLDDYDGRWVAVRDGTVVAHGDDEESLRADPAVRDGDLVYPIGDPPSGFYLIN
Ga0134055_119778623300012401Grasslands SoilMNQKPDLDGYDGKWVAVRGAKVVAHADDEETLRAHPAVREDDDFYPVGDPPSGFY
Ga0134053_128152813300012406Grasslands SoilMNQNPDLERYNGKWVAVRGPKVVAHAEDEETLRAHPAVRDDDDVYPVGDPPSGFYMINV
Ga0150984_10076476913300012469Avena Fatua RhizosphereMNQNPDLERYDGKWVAVRGPKVVAHAEDEETLRAHPAVRDDDDVYPVGDPPSGFYMINV*
Ga0150984_10363949113300012469Avena Fatua RhizosphereMTLELGPYENTWVAVRGDEVIASAADEQSLRADPAVQDGDDVYPVGEPPSGFYLLNV*
Ga0150984_10451935133300012469Avena Fatua RhizosphereLSTPEHGEPEQAAELDPHDLSNFDGEWVAVRDGKVVAHSPDEETLRADPNVQDGDDIYPVGDPPSGFYMI
Ga0150984_10706183513300012469Avena Fatua RhizosphereMKQSPDLEQYDGKWVAVRGPKVVAHADDEETLRAHPAVREDDDLYPVGDPPSGFYMINV*
Ga0150984_10793954223300012469Avena Fatua RhizosphereMNQNPDLERYNGKWVAVRGPKVVAHAEDEETLRAHPAVRDDDDVYPVGDPPSGFYMINV*
Ga0150984_10854298723300012469Avena Fatua RhizosphereMTLDLAPYENQWVAVRGEEVVASAADEQSLRADPTVQDGDDVYPVGEPPSGFYLLNV*
Ga0150984_11578739313300012469Avena Fatua RhizosphereMSTTPELSQELDDYDGRWVAMRDGQVVAHAADEEALRRAPAMRHGDLLFPIGDPPTGFYLINV*
Ga0150984_11839494723300012469Avena Fatua RhizosphereVNQNPDLERYDGKWVAVRGPKVVAHADDEETLRAHPAVREDDDVYPVGDPPSGFYMINV*
Ga0157348_102202423300012479Unplanted SoilMSTMPSQNLDDYQDRWVAVRDGQVVAHAADEEALRLNPSVRDGDLVYPIGDPPSGFYMINV*
Ga0137358_1025993323300012582Vadose Zone SoilMSEAAPLSQNLDDYDGRWVAMRADAVVACGDDEETVRSDPNVRDGDLVYPIGLPPSGFYLLNV*
Ga0137359_1006460033300012923Vadose Zone SoilMSEAAPLSQNLDDYDGRWVAMRADAVVACGDDEETVRSDPNVRDGDLVYPIGLPPSGFYLLKV*
Ga0164299_1067185723300012958SoilLSTEPEGLPQELDHYDGRWVAVRAGTHVAHAETEEALRADPAVRDGDLLKPVGDPPSGFYMINV*
Ga0164299_1146192313300012958SoilMNQKPDLDRYDGKWVAVRGPKVVAHADDEETLRAHPAVREDDDFYPVGDPPSGFYMINV*
Ga0164301_1024031333300012960SoilRGKPRLSTEPEGLPQELDHYDGRWVAVRAGTIVAHADTEEALRADPAVRDGDLLYPVGDPPSGFYMINV*
Ga0126369_1193389713300012971Tropical Forest SoilTEEPAQLSQNLDDYDGRWVAVRNGEVVAHAEDEETLRADPAVRDGDLLYPIGDPPSGFYLINV*
Ga0164304_1025871623300012986SoilLSTEPEGLPQELDHYDGRWVAVRAGTIVAHAETEEALRADPAVRDGDLLYPVGDPPSGFYMINV*
Ga0182008_1048765323300014497RhizosphereGDLEHYAGQWVAVRGGVVVASAADEKALRALPEVEDGDDVYPIGDPPSGFYFVEGSV*
Ga0173483_1068155023300015077SoilMTAAFNDPVSPNLDNYTGQWVAVRDRVVVAHADDEESLRKQAAVRDGDLLFPIGDPPSGFYLINV*
Ga0182005_120456923300015265RhizosphereMIQNPDLEPYDGKWVAVRGPKVVAHADDEETLRAHPAVREDDDFYPVGDPPSGFYMINV*
Ga0132258_1045919733300015371Arabidopsis RhizosphereMNQNPDLERYDGKWVAVRGPKVVAHADDEETLRAHPAVREGDDVYPVGDPPSGFYMINV*
Ga0132258_1052534213300015371Arabidopsis RhizospherePGDLEHYSGQWVAVRGGEGVASAADEESLRALPEVQEGDDVYPIGDPPSGFYFVEGSV*
Ga0132256_10338430923300015372Arabidopsis RhizosphereMNQNPDLERYDGKWVAVRGPKVVAHADDEETLRAHPAVRESDDVYPVGDPPSGFYM
Ga0066655_1061321813300018431Grasslands SoilMTAAPAPLSQNLDDYDGRWVAVRDGTVVAHAADEESLRADVAVRDGDLLFPIGDPPSGFYLINV
Ga0066667_1016741723300018433Grasslands SoilMNQKPDLDRYDGKWVAVRGPKVVAHADDEETLRAHPAVREDDDFYPVGDPPSGFYMINV
Ga0066667_1038916323300018433Grasslands SoilMSATPELSQNLDDYDGRWVAVRDGQVVAHAGDEESLRADAAVRDGDLFFPIGDPPSGFYLINV
Ga0190269_1106399513300018465SoilMNAANHRPTEPLSQELDDYDGRWVAVRDGVVVSHAADEETLRRDPVCRDGDLCYPIGDPVTGFYMINV
Ga0066669_1051450223300018482Grasslands SoilMKARSEPLSQNLDDYDGRWVAVRDGQVVAHAGDEESLRADAAVRDGDLFFPIGDPPSGFYLINV
Ga0066669_1176103613300018482Grasslands SoilVNETPELSQNLDDYDGRWVAVRDGKVVAHGDGEESLRADPAVRDGDLVYPIGDPPSGF
Ga0197907_1149109123300020069Corn, Switchgrass And Miscanthus RhizosphereMNTAFEPLSQNLDDYDGRWVAVRDGRVVAHADDEESLRADEAVRDGDLVYPIGDPPSGFYLINV
Ga0206352_1107962323300020078Corn, Switchgrass And Miscanthus RhizosphereLTAPAQHSQNLDDYDGRWIAVRDGRVVAHAADEEALRSDPAVREGDLVYPIG
Ga0193699_1002000123300021363SoilVSAREHTETEPPGLSQNLDDYDGRWVAVRDGTIVAHGESREAVLADPSCEEGDLVYPIGEPPSGFYLINV
Ga0182009_1051540113300021445SoilMNQKPELDRYDGKWVAVRGPKVVAHADDEETLRAHPAVREDDDFYPVGDPPSGFYMINV
Ga0224712_1033389113300022467Corn, Switchgrass And Miscanthus RhizosphereMTLELGPYEGRWVAVRGDEVVADAEDEQTLRADPKVREGDDVYPVGEPPSGFYL
Ga0247794_1023092123300024055SoilMNQNPDLGNYDGKWVAVRGPKVVAHADDEETLRAHPAVREDDDVYPVGDPPSGFYMINV
Ga0207693_1031178613300025915Corn, Switchgrass And Miscanthus RhizosphereVHYEGRWVAVRDGEVVADAENEATLRANPRVLASDLVYPIGEPPSGFYLINV
Ga0207663_1145997223300025916Corn, Switchgrass And Miscanthus RhizosphereMNQKPDLDRYDGKWVAVRGAKVVAHADDEDTLRAHPAVREDDDFYPVGDPPSGFYMINV
Ga0207660_1072075323300025917Corn RhizosphereMSHDLDRYDGRWVAVREGRVVADAEDEQTLRADPEVRDGDDVYPIGEPPSGFYMINV
Ga0207652_1018932443300025921Corn RhizosphereMSHDLDAFDGKWVAVRDGRVVAHAEDEQALRADPAVRDDDDVYPIGDPPSGFYMINV
Ga0207661_1205908523300025944Corn RhizosphereMNQNPDLERYDGKWVAVRGPKVVAHADDEETLRAHPAVREGDDVYPVGDPPSGFYMINV
Ga0209027_127441123300026300Grasslands SoilMKATPEPLSQNLDDYDGRWVAVRDGQVVAHAGDEESLRADAAVRDGDLVFPIGD
Ga0209474_1018816823300026550SoilMKAPSEQLSQNLDDYDGRWVAVRSGQVVAHAADEDALRADAAVRDGDLLFPIGDPPSGFYLINV
Ga0209474_1036686513300026550SoilMTAAPEPLSQNLDDYDGRWVAVRDGTVVAHAADEESLRADVAVRDGDLLFPIGDPPSGFYLINV
Ga0307291_101237933300028707SoilMNQKPDLDRYEGKWVAVRGPKVVAHADDEETLRAHPAVREDDDLYPVGDPPSGFYMINV
Ga0307287_1037646913300028796SoilMNAANHRPTEPLSQELDDYDGRWVAVRDGVLVSHAADEETLRRDPVCRDGDLCYPIGDPVTGFYMINV
Ga0307503_1041274423300028802SoilMNATNHGTSEPLSQELDDYDGRWVAVRDGLVVAHASDEETLRREHVTRDGDLCFPIGDPVTGFYMINV
Ga0247826_1041915823300030336SoilMNQNPDLERYDGKWVAVRGPKVVAHADDEETLRAHPAVRDDDDVYPVGDPPSGFYMINV
Ga0308189_1034489213300031058SoilMNQKPDLDRYEGKWVAVRWPKVVAHADDEETLRAHPAVREDDDLYPVGDPPSGFYMINV
Ga0308201_1002107123300031091SoilMSGHSQSLDDYDGRWVAVRDGTVVAHADDEEALRSDPAVREGDLVYPIGEPAAGFYMIN
Ga0308201_1009302723300031091SoilMNAPDLEPYDGKWVAVRGSEVVAHAEDEEALRAHPAVREGDDVYPVGDPPSGFYMINV
Ga0308201_1009553613300031091SoilMNQNPDLERYDGKWVAVRGPKVVAHAEDEETLRAHPAVRDDDDVYPVGEPPSGFYMINV
Ga0308201_1025333223300031091SoilMNQNPDLERYDGKWVAVRGPKVVAHADDEETLRAHAAVREDDDVYPVGDPPSGFYMINV
Ga0307469_1075870823300031720Hardwood Forest SoilMSSVDDRDPAASGLTQELDDYDGRWVAVRGQVVVADAADEEALRRELAVREGDLLFPIGDPPTGFYMINV
Ga0335085_1049292623300032770SoilMNKPSQNLEDYDGHWVAVRKGEVVAHAESEDTLRDDPAVREGDLLYPIGEPPSGFYLINV
Ga0335075_1106605133300032896SoilPAVLSQQLDDYTGRWVAVRNGLVIAHASDEASLRADPSLRDGDLVYPIGPPPSGFYLINV
Ga0372946_0351904_295_4713300034384SoilMSQPDLEPYDGQWVAVRGDRVVAAADDQEALQAHPNVRESDDMYPIGDPPSGFYLINV

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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