Metagenome / Metatranscriptome Family F045726

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F045726
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	52 residues
Representative Sequence	VVISMTANQSTPRPRALQAVRRAARALNSINDQQVQMWEAFWRAGRFPSD
Number of Associated Samples	111
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	54.61 %
% of genes near scaffold ends (potentially truncated)	35.53 %
% of genes from short scaffolds (< 2000 bps)	82.24 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (59.211 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (21.053 % of family members)
Environment Ontology (ENVO)	Unclassified (30.263 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.289 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.18% β-sheet: 0.00% Coil/Unstructured: 62.82%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF04073	tRNA_edit	13.16
PF13350	Y_phosphatase3	5.26
PF00581	Rhodanese	5.26
PF00903	Glyoxalase	3.95
PF00005	ABC_tran	2.63
PF06897	DUF1269	2.63
PF13413	HTH_25	2.63
PF04248	NTP_transf_9	1.97
PF12680	SnoaL_2	1.97
PF01042	Ribonuc_L-PSP	1.97
PF03861	ANTAR	1.97
PF12681	Glyoxalase_2	1.97
PF00501	AMP-binding	1.32
PF06071	YchF-GTPase_C	1.32
PF03417	AAT	1.32
PF13649	Methyltransf_25	1.32
PF01872	RibD_C	1.32
PF00069	Pkinase	1.32
PF07690	MFS_1	1.32
PF03479	PCC	0.66
PF13348	Obsolete Pfam Family	0.66
PF00491	Arginase	0.66
PF05977	MFS_3	0.66
PF01575	MaoC_dehydratas	0.66
PF01339	CheB_methylest	0.66
PF02233	PNTB	0.66
PF01909	NTP_transf_2	0.66
PF08327	AHSA1	0.66
PF07969	Amidohydro_3	0.66
PF01061	ABC2_membrane	0.66
PF01258	zf-dskA_traR	0.66
PF13546	DDE_5	0.66
PF13427	DUF4111	0.66
PF13340	DUF4096	0.66
PF07366	SnoaL	0.66
PF01425	Amidase	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.26
COG4803	Uncharacterized membrane protein	Function unknown [S]	2.63
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.97
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	1.97
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	1.97
COG0012	Ribosome-binding ATPase YchF, GTP1/OBG family	Translation, ribosomal structure and biogenesis [J]	1.32
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.32
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.32
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	1.32
COG4927	Predicted choloylglycine hydrolase	General function prediction only [R]	1.32
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.66
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.66
COG1282	NAD/NADP transhydrogenase beta subunit	Energy production and conversion [C]	0.66
COG1661	Predicted DNA-binding protein with PD1-like DNA-binding motif, PPC/DUF296 domain	General function prediction only [R]	0.66
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.66
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.21 %
Unclassified	root	N/A	40.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.21 %
Unclassified	root	N/A	40.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.21 %
Unclassified	root	N/A	40.79 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.71 %
Unclassified	root	N/A	40.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	41.45 %
Unclassified	root	N/A	40.79 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4.61 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.79 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	26.97 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	4.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.61 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.97 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.97 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.97 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.32 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.66 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.66 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.66 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.66 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.97 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.97 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.32 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.32 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	0.66 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	0.66 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.66 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.66 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.66 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.97 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.97 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1.32 %
Saccharothrix	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix	1.32 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.66 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.66 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.66 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.66 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.66 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	0.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.97 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.97 %
Saccharothrix syringae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix syringae	1.32 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1.32 %
Actinopolymorpha alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	0.66 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.66 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.66 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.66 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.66 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.79 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.61 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.97 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.97 %
Saccharothrix syringae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix syringae	1.32 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	1.32 %
Frankia sp. CcI6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. CcI6	0.66 %
Streptomyces sp. TLI_235	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. TLI_235	0.66 %
Actinopolymorpha alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	0.66 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.66 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	0.66 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.66 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02IPME0	Not Available	530	Open in IMG/M
2189573004\|GZGWRS401C63KK	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300004633\|Ga0066395_10446349	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300005162\|Ga0066814_10007546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1247	Open in IMG/M
3300005332\|Ga0066388_100475800	All Organisms → cellular organisms → Bacteria	1888	Open in IMG/M
3300005332\|Ga0066388_103916411	Not Available	759	Open in IMG/M
3300005337\|Ga0070682_100336389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1121	Open in IMG/M
3300005364\|Ga0070673_101311437	Not Available	680	Open in IMG/M
3300005435\|Ga0070714_101299902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	710	Open in IMG/M
3300005436\|Ga0070713_102259031	Not Available	527	Open in IMG/M
3300005439\|Ga0070711_100776832	Not Available	811	Open in IMG/M
3300005450\|Ga0066682_10078538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2048	Open in IMG/M
3300005450\|Ga0066682_10261634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1114	Open in IMG/M
3300005713\|Ga0066905_100011278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4270	Open in IMG/M
3300005713\|Ga0066905_100265776	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300005719\|Ga0068861_101680615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	627	Open in IMG/M
3300005764\|Ga0066903_100132934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3507	Open in IMG/M
3300005764\|Ga0066903_100892260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1607	Open in IMG/M
3300005764\|Ga0066903_102242043	Not Available	1054	Open in IMG/M
3300005764\|Ga0066903_103080746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	902	Open in IMG/M
3300005764\|Ga0066903_103673360	Not Available	826	Open in IMG/M
3300005764\|Ga0066903_105384488	Not Available	676	Open in IMG/M
3300005840\|Ga0068870_10618831	Not Available	738	Open in IMG/M
3300005841\|Ga0068863_100246555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1725	Open in IMG/M
3300005983\|Ga0081540_1002203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16098	Open in IMG/M
3300006031\|Ga0066651_10412508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300006057\|Ga0075026_100472345	Not Available	717	Open in IMG/M
3300006059\|Ga0075017_100778321	Not Available	739	Open in IMG/M
3300006605\|Ga0074057_10033373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3089	Open in IMG/M
3300006755\|Ga0079222_11543174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	626	Open in IMG/M
3300006796\|Ga0066665_10962335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	657	Open in IMG/M
3300006804\|Ga0079221_10983773	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300006854\|Ga0075425_100540430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1341	Open in IMG/M
3300006871\|Ga0075434_100011948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. CcI6	8213	Open in IMG/M
3300006903\|Ga0075426_10091371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2180	Open in IMG/M
3300006904\|Ga0075424_100118100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2802	Open in IMG/M
3300007076\|Ga0075435_100064946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2966	Open in IMG/M
3300009137\|Ga0066709_104133527	Not Available	528	Open in IMG/M
3300009551\|Ga0105238_12511279	Not Available	551	Open in IMG/M
3300009553\|Ga0105249_12315051	Not Available	610	Open in IMG/M
3300009792\|Ga0126374_10454991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	911	Open in IMG/M
3300010043\|Ga0126380_10037489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2514	Open in IMG/M
3300010043\|Ga0126380_10278556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1176	Open in IMG/M
3300010043\|Ga0126380_10592239	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	871	Open in IMG/M
3300010043\|Ga0126380_12075907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300010046\|Ga0126384_10028965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3660	Open in IMG/M
3300010046\|Ga0126384_11112160	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300010047\|Ga0126382_11053895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	717	Open in IMG/M
3300010048\|Ga0126373_10915623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	941	Open in IMG/M
3300010154\|Ga0127503_11242251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1148	Open in IMG/M
3300010359\|Ga0126376_10053195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2875	Open in IMG/M
3300010359\|Ga0126376_10481091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1144	Open in IMG/M
3300010359\|Ga0126376_11900406	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300010360\|Ga0126372_10015271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4319	Open in IMG/M
3300010360\|Ga0126372_11482128	Not Available	714	Open in IMG/M
3300010360\|Ga0126372_12479575	Not Available	570	Open in IMG/M
3300010361\|Ga0126378_10122488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2607	Open in IMG/M
3300010362\|Ga0126377_10463421	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1292	Open in IMG/M
3300010362\|Ga0126377_12219165	Not Available	625	Open in IMG/M
3300010366\|Ga0126379_10560006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1224	Open in IMG/M
3300010366\|Ga0126379_11428919	Not Available	798	Open in IMG/M
3300010376\|Ga0126381_101413015	Not Available	1006	Open in IMG/M
3300010397\|Ga0134124_10718016	Not Available	991	Open in IMG/M
3300010398\|Ga0126383_10048018	All Organisms → cellular organisms → Bacteria	3535	Open in IMG/M
3300010398\|Ga0126383_12064396	Not Available	657	Open in IMG/M
3300010398\|Ga0126383_12910507	Not Available	559	Open in IMG/M
3300010398\|Ga0126383_13010704	Not Available	550	Open in IMG/M
3300010399\|Ga0134127_11633494	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300011119\|Ga0105246_11537312	Not Available	626	Open in IMG/M
3300012198\|Ga0137364_10724303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	751	Open in IMG/M
3300012198\|Ga0137364_10749498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	738	Open in IMG/M
3300012198\|Ga0137364_10972354	Not Available	642	Open in IMG/M
3300012199\|Ga0137383_10820017	Not Available	679	Open in IMG/M
3300012200\|Ga0137382_10078453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2135	Open in IMG/M
3300012200\|Ga0137382_11216914	Not Available	534	Open in IMG/M
3300012201\|Ga0137365_10056493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2964	Open in IMG/M
3300012201\|Ga0137365_10167420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1648	Open in IMG/M
3300012351\|Ga0137386_10722558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	716	Open in IMG/M
3300012356\|Ga0137371_10341146	Not Available	1165	Open in IMG/M
3300012948\|Ga0126375_10238764	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300012948\|Ga0126375_11874171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	526	Open in IMG/M
3300012971\|Ga0126369_10318181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1565	Open in IMG/M
3300015371\|Ga0132258_10330694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3761	Open in IMG/M
3300016294\|Ga0182041_10656029	Not Available	927	Open in IMG/M
3300016319\|Ga0182033_10460348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1086	Open in IMG/M
3300016404\|Ga0182037_11183497	Not Available	671	Open in IMG/M
3300017947\|Ga0187785_10448923	Not Available	631	Open in IMG/M
3300017959\|Ga0187779_10329799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	982	Open in IMG/M
3300017959\|Ga0187779_10456629	Not Available	840	Open in IMG/M
3300017999\|Ga0187767_10021894	Not Available	1391	Open in IMG/M
3300018032\|Ga0187788_10563612	Not Available	500	Open in IMG/M
3300018058\|Ga0187766_10320524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. TLI_235	1008	Open in IMG/M
3300018060\|Ga0187765_10043323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2286	Open in IMG/M
3300018060\|Ga0187765_10947373	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300018089\|Ga0187774_10956225	Not Available	594	Open in IMG/M
3300021088\|Ga0210404_10849267	Not Available	522	Open in IMG/M
3300021560\|Ga0126371_11355106	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300021560\|Ga0126371_11438877	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300021560\|Ga0126371_11451936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	815	Open in IMG/M
3300021560\|Ga0126371_12130041	Not Available	676	Open in IMG/M
3300025915\|Ga0207693_10119320	All Organisms → cellular organisms → Bacteria	2071	Open in IMG/M
3300025927\|Ga0207687_11088930	Not Available	686	Open in IMG/M
3300025928\|Ga0207700_11497101	Not Available	599	Open in IMG/M
3300025961\|Ga0207712_11505322	Not Available	603	Open in IMG/M
3300026023\|Ga0207677_10960653	Not Available	773	Open in IMG/M
3300026088\|Ga0207641_11108253	Not Available	790	Open in IMG/M
3300026121\|Ga0207683_10335841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1385	Open in IMG/M
3300026340\|Ga0257162_1029798	Not Available	670	Open in IMG/M
3300026475\|Ga0257147_1003384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1858	Open in IMG/M
3300027725\|Ga0209178_1370966	Not Available	539	Open in IMG/M
3300027874\|Ga0209465_10644720	Not Available	522	Open in IMG/M
3300028819\|Ga0307296_10043699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2364	Open in IMG/M
3300031226\|Ga0307497_10688230	Not Available	526	Open in IMG/M
3300031543\|Ga0318516_10234229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	1062	Open in IMG/M
3300031544\|Ga0318534_10164029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1284	Open in IMG/M
3300031549\|Ga0318571_10449554	Not Available	511	Open in IMG/M
3300031564\|Ga0318573_10048327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2068	Open in IMG/M
3300031564\|Ga0318573_10489702	Not Available	662	Open in IMG/M
3300031572\|Ga0318515_10307539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	850	Open in IMG/M
3300031573\|Ga0310915_10215613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1345	Open in IMG/M
3300031713\|Ga0318496_10182558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1151	Open in IMG/M
3300031713\|Ga0318496_10580412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	620	Open in IMG/M
3300031719\|Ga0306917_11333814	Not Available	554	Open in IMG/M
3300031723\|Ga0318493_10028157	Not Available	2537	Open in IMG/M
3300031723\|Ga0318493_10671958	Not Available	580	Open in IMG/M
3300031744\|Ga0306918_11172419	Not Available	594	Open in IMG/M
3300031771\|Ga0318546_10355827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1019	Open in IMG/M
3300031782\|Ga0318552_10692678	Not Available	520	Open in IMG/M
3300031805\|Ga0318497_10624438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	604	Open in IMG/M
3300031819\|Ga0318568_10103644	Not Available	1706	Open in IMG/M
3300031846\|Ga0318512_10723946	Not Available	511	Open in IMG/M
3300031896\|Ga0318551_10852137	Not Available	531	Open in IMG/M
3300031910\|Ga0306923_10293240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1859	Open in IMG/M
3300031910\|Ga0306923_11848107	Not Available	619	Open in IMG/M
3300031912\|Ga0306921_11212570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	840	Open in IMG/M
3300032001\|Ga0306922_10084124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3345	Open in IMG/M
3300032066\|Ga0318514_10248647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	936	Open in IMG/M
3300032067\|Ga0318524_10550270	Not Available	607	Open in IMG/M
3300032770\|Ga0335085_10462144	Not Available	1457	Open in IMG/M
3300032783\|Ga0335079_10002973	All Organisms → cellular organisms → Bacteria	19528	Open in IMG/M
3300032783\|Ga0335079_10117152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3008	Open in IMG/M
3300032783\|Ga0335079_10647414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix syringae	1110	Open in IMG/M
3300032805\|Ga0335078_11823154	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300032828\|Ga0335080_10541805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharothrix → Saccharothrix syringae	1231	Open in IMG/M
3300032828\|Ga0335080_11633438	Not Available	634	Open in IMG/M
3300032892\|Ga0335081_10011644	All Organisms → cellular organisms → Bacteria	14241	Open in IMG/M
3300032954\|Ga0335083_10267476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1519	Open in IMG/M
3300032954\|Ga0335083_10375222	All Organisms → cellular organisms → Bacteria	1223	Open in IMG/M
3300032954\|Ga0335083_10530734	Not Available	980	Open in IMG/M
3300033158\|Ga0335077_10493490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1296	Open in IMG/M
3300033158\|Ga0335077_10877257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	906	Open in IMG/M
3300034820\|Ga0373959_0047484	Not Available	918	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.84%
Host-Associated	Host-Associated	13.16%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.87%
Plants	Host-Associated → Plants	13.16%
Aquatic	Environmental → Aquatic	1.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.26%
Sediment	Environmental → Aquatic → Sediment	1.32%
Freshwater	Environmental → Aquatic → Freshwater	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.47%
Loam	Environmental → Terrestrial → Soil → Loam	11.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.58%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.32%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.32%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.66%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.24%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.39%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.95%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.32%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.66%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.05%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.47%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.97%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.32%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.32%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.32%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.32%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.66%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.66%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.66%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.66%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.66%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.66%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.66%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.66%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.66%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.66%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_10752800	2170459005	Grass Soil	MVSTSEPISNMVISMTANQSTPRPRALQAVRRAARALKPINDQQVLMVEAFWRSGRF
FG2_06632410	2189573004	Grass Soil	MVSTSERLTRNVVISMTANQPRALRAVRRAARAFSSVNDQQVAMWEAYWRAGRFPPK
Ga0066395_104463492	3300004633	Tropical Forest Soil	MSANQSTPRPRALQAVRRAARALNSINDQQVKMWEAFWQAGRFPPK*
Ga0066814_100075461	3300005162	Soil	RRIVVSSMTANQPTPRPRAWQAVGRAARALKSVNDQQVSMWEAFWRSNRFPAD*
Ga0066388_1004758001	3300005332	Tropical Forest Soil	PTPRPRAWRAVGRAARALKSVNDQQVSMWEAFWRANRFPADR*
Ga0066388_1039164112	3300005332	Tropical Forest Soil	VISMTANQPTPRPRALHAVRRAVRALKTGNDQQVAMWEAFWRAGRFPEN*
Ga0070682_1003363891	3300005337	Corn Rhizosphere	MTANQPRALRAVRRAARALSNVNDQQVAMWEAYWRAGRFPPK*
Ga0070673_1013114371	3300005364	Switchgrass Rhizosphere	VSTSERLTRNVVIAMTANQPRALRAVRRAARALSSVNDQQVAMWEAYWRAGRFPPK*
Ga0070714_1012999021	3300005435	Agricultural Soil	MVSTSERISKQVISMSANQSTRRPRALQAVRRAARAFNSINDQQVQMWE
Ga0070713_1022590312	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MVSTSERISKQVISMSANQSTRRPRALQAVRRAARAINSINDQQVQMWEAFWRAGRYPSDH*
Ga0070711_1007768322	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSANQSTRRPRALQAVRRAARALNSINDQQVQMWEAFWRAGRFPSDH*
Ga0066682_100785384	3300005450	Soil	VIPMTANKPAPRPRALQPVRRAARALKRINDEQVSMWEAFWRANRFPAD*
Ga0066682_102616342	3300005450	Soil	MVSTSEPISNVVISMTANQSTPRPRALQAVRRAARALKPINDQQVRMWEAFWRAGRFPSD
Ga0066905_1000112782	3300005713	Tropical Forest Soil	MTANQPTPRPRATQAVRRVTRAFKRINDEQVLMWEAFWRSNRFPGD*
Ga0066905_1002657763	3300005713	Tropical Forest Soil	WGALARSSMVSTSERISNVVISMSANQSTPRPRVLQAVRRAARALKSTNDQQVAMWEAFWRSGRFPEN*
Ga0068861_1016806152	3300005719	Switchgrass Rhizosphere	VISMTANKPAPRPRALQPVRRAARALKRINDEQVSMWEAFWRANRFPAD*
Ga0066903_1001329344	3300005764	Tropical Forest Soil	MLSTSGRLSRRQQIQNGVISMTANQPTPRRGAAQTVRRVTRAFKRINDEQVLMWEALWRSSRFPTD*
Ga0066903_1008922602	3300005764	Tropical Forest Soil	MVSTSERLTRKVVIPMTANQPTPRPRALQAVRRAARALKSTNDQQVAMWEAFWRAGRFPEN*
Ga0066903_1022420432	3300005764	Tropical Forest Soil	MVYTSERISRRPTRNVVISMTSNQPAPRPRALQAVRRAARALKSLNDEQLSMWDAYLRSSRFPEN*
Ga0066903_1030807462	3300005764	Tropical Forest Soil	MTANQPTPRPRAWRAVGRAARALKSVNDQQVSMWEAFWRANRFPADR*
Ga0066903_1036733601	3300005764	Tropical Forest Soil	NVVISMTANQPTPRPRAWQTVRRAARALKNANDQQVLMWEAFLRSNRFPTE*
Ga0066903_1053844882	3300005764	Tropical Forest Soil	VVISMTANQPTPRPRAWQTVRRAARALKYANDQQVLMWEAFLRSNRFPKE*
Ga0068870_106188312	3300005840	Miscanthus Rhizosphere	VSTSERLTRKVVIAMTANQPRALRAVRRAARALSSVNDQQVAMWEAYWRAGRFPPK*
Ga0068863_1002465552	3300005841	Switchgrass Rhizosphere	VSTSERLTRNVVIAMTANQPRALRAVRRAARALSNVNDQQVAMWEAYWRAGRFPPK*
Ga0081540_100220314	3300005983	Tabebuia Heterophylla Rhizosphere	MVSLRTAQPATSNSQNGVISMTANQPTARPRATQAVRRVTRAFKRVNDEQILMWEAFWRTNRFPTD*
Ga0066651_104125082	3300006031	Soil	VVISMTANQSTPRPRALQAVRRAARALHSLNGQQVQMWEAFWRAGRFPSD*
Ga0075026_1004723452	3300006057	Watersheds	MVSTSERISKQVISMSANQSTPRPRALQAVRRAARAFNSINDQQVQMWEAFWRAGRYPSDH*
Ga0075017_1007783212	3300006059	Watersheds	MVSTSERIGKQVISMSANQSTPRPRALQAVRRAARAFNSINDQQVQMWEAFWRAGRYPSDH*
Ga0074057_100333734	3300006605	Soil	MTANQPTPRPRAWQAVGRAARALKSVNDQQVSMWEAFWRSNRFPAD*
Ga0079222_115431742	3300006755	Agricultural Soil	VSTSQRISKQVISMSANQSTRRPRALQAVRRAARAFNSINDQQVQMWEAFWRAGRYPSDH
Ga0066665_109623351	3300006796	Soil	GSANVVISMSANQSTPRPRALQAVRRAARALNSINDQQVQMWEAFWRAGRYPSDH*
Ga0079221_109837731	3300006804	Agricultural Soil	VPARCGTRGLRAKLEVSTSERLTRNVVIAMTANQPRALRAVRRAARALSNVNDQQVAMWEAYWRAGRFPPK*
Ga0075425_1005404302	3300006854	Populus Rhizosphere	VISMTANKPAPRPQTLQPVRRAARALKRINDEQVSMWEAFWRANRFPAD*
Ga0075434_1000119481	3300006871	Populus Rhizosphere	PRALRAVRRAARALSSVNDQQVAMWEAYWRAGRFPPK*
Ga0075426_100913714	3300006903	Populus Rhizosphere	VISMTANQSTPRPRALRAVRRAARALNNINDQQVAMWEAYWRAGRFPAK*
Ga0075424_1001181004	3300006904	Populus Rhizosphere	VISMTANQSTPRPRALRAVRRAARALSSVNDQQVAMWEAYWRAGRFPAK*
Ga0075435_1000649463	3300007076	Populus Rhizosphere	VISMTANQSTPRPRALRVVRRAARALSSVNDQQVAMWEAYWRAGRFPAK*
Ga0066709_1041335271	3300009137	Grasslands Soil	VVISMTANQSTPRPRALQAVRRAARALNSINDQQVQMWEAFWRAG
Ga0105238_125112792	3300009551	Corn Rhizosphere	ANQPRALRAVRRAARALSSVNDQQVAMWEAYWRAGRFPPK*
Ga0105249_123150511	3300009553	Switchgrass Rhizosphere	LEPSSKVSTSERLTRNVVIAMTANQPRALRAVRRAARALSNVNDQQVAMWEAYWRAGRFPPK*
Ga0126374_104549912	3300009792	Tropical Forest Soil	MVSTSERLTRNVVISMTANQTTARPRALQAVRRAARSLRSINDQQVAMWEAFWRSGRFPEN*
Ga0126380_100374891	3300010043	Tropical Forest Soil	VVISMTANQPTPRPRATQAVRRVTRAFKRINDEQVLMWEAFWRSNRFPGD*
Ga0126380_102785562	3300010043	Tropical Forest Soil	MTANQPTPRPGAAQAVRRVTRAFKRINDEQILMWEALWRAGRFPTD*
Ga0126380_105922392	3300010043	Tropical Forest Soil	MRVISMTANQSTSRPRALQAVRRAARALKSTNDQQVAMWESFWRAGRFPSE*
Ga0126380_120759072	3300010043	Tropical Forest Soil	QLQNVVISMTANQPTPRSRAPQAVRRITRAFKRINDEQVMMWEAFWRANRFPTE*
Ga0126384_100289654	3300010046	Tropical Forest Soil	MVSTSERLTRNVVIPMTANQPTPRPRALQAVRRAARALKSTNDQQVAMWEAFWRSGRFPEN*
Ga0126384_111121601	3300010046	Tropical Forest Soil	MVSTSERLTRNVVISMTANQPRALRAVRRAARALKSTNDQQVAMWEAFWR
Ga0126382_110538952	3300010047	Tropical Forest Soil	MQLQNVVISMTANQPTPRSRAPQAVRRITRAFKRINDEQVMMWEAFWRANRFPTE*
Ga0126373_109156232	3300010048	Tropical Forest Soil	MVSTSERLTRNVVISMTANQPTPRPRALHAVRRAVRALKTGNDQQVAMWEAFWRAGRFPEN*
Ga0127503_112422511	3300010154	Soil	ISMSANQSTPRPRALQAVRRAARAFNSINDQQVQMWEAFWRAGRYPSDH*
Ga0126376_100531954	3300010359	Tropical Forest Soil	MTANQPAPRPGAAQAVRRVTRAFKRINDEQISMWEALWRASRFPTD*
Ga0126376_104810912	3300010359	Tropical Forest Soil	GSAGHKQLQNVVISMTANQPTPRPRATQAVRRVTRAFKRINDEQVLMWEAFWRSNRFPGD
Ga0126376_119004062	3300010359	Tropical Forest Soil	MVSTSERLTRKIVISMTANQPRALRVVRRAARALKSTNDQ
Ga0126372_100152712	3300010360	Tropical Forest Soil	MVSTSERLTRKVVIPMTANQPTPRPRALQAVRRAARALRSTNDQQVAMWEAFWRAGRFPEN*
Ga0126372_114821281	3300010360	Tropical Forest Soil	MTANQPAPRPGAAQAVRRVTRAFKRINDEQILMWEALWRAGRFPTD*
Ga0126372_124795752	3300010360	Tropical Forest Soil	MVSTSERLTRNVVISMTANQPTRRPRALQAVRRAARALNSVNDQQVTMWEAFWRAGRFPEN*
Ga0126378_101224884	3300010361	Tropical Forest Soil	MVSATSDSRNRNVVISMTANQPTPRPRAWQTVRRAARALKNANDQQVLMWEAFLRSNRFPTE*
Ga0126377_104634213	3300010362	Tropical Forest Soil	GGKQLQNGVSSMTANQPTPRPGAAQAVRRVTRAFKRINDEQILMWEALWRAGRFPTD*
Ga0126377_122191651	3300010362	Tropical Forest Soil	TARPRALQAVRRAARSLRSINDQQVAMWEAFWRSGRFPEN*
Ga0126379_105600061	3300010366	Tropical Forest Soil	MVSNTSDSRNRNVVISMTANQPTPRPRAWQTVRRAARALKNANDQQVLMWEAFLRSNRFPTE*
Ga0126379_114289192	3300010366	Tropical Forest Soil	MTANQTTARPRALQAVRRAARSLRSINDQQVAMWEAFWRSGRFPEN*
Ga0126381_1014130152	3300010376	Tropical Forest Soil	MVSTSERLTRNVVISMTANQSTHRPRALHAVRRAVRALKTGNDQQVAMWEAFWRAGRFPEN*
Ga0134124_107180162	3300010397	Terrestrial Soil	ALRAVRRAARALSNVNDQQVAMWEAYWRAGRFPPK*
Ga0126383_100480182	3300010398	Tropical Forest Soil	VVISMTSNQPAPRPRALQAVRRAARALKSFNDEQLSMWDAFYRSNRFPPQ*
Ga0126383_120643961	3300010398	Tropical Forest Soil	MTANQSTPRPRALQAVRRAARALHSINDQQVSMWEAFWRAGRFPAE*
Ga0126383_129105071	3300010398	Tropical Forest Soil	VVISMTANQPTPRPRAWQTVRRAARALKNANDQQVLMWEAFLRSNRFPTE*
Ga0126383_130107042	3300010398	Tropical Forest Soil	MRVISMTANQSTSRPRALQAVRRAARALKSTNDQQVAMWEAFWRAGRFPEN*
Ga0134127_116334941	3300010399	Terrestrial Soil	MTANQPRALRAVRRAARALSNVNDQQVAMWEAYWRAG
Ga0105246_115373121	3300011119	Miscanthus Rhizosphere	SSKVSTSERLTRNVVIAMTANQPRALRAVRRAARALSNVNDQQVAMWEAYWRAGRFPPK*
Ga0137364_107243032	3300012198	Vadose Zone Soil	VVISMTANQSTPRPRALQAVRRAARALKPINDQQVRMWEAFWRAGRFPSD*
Ga0137364_107494981	3300012198	Vadose Zone Soil	VVISMTANQSTPRPRALQAVRRAARALNSINDQQVQMWEAFWRAGRFPSD*
Ga0137364_109723541	3300012198	Vadose Zone Soil	MVSTSEPISNVVTSMTANQSTPRPRALQTVRRAARALKPINDQQVRMWEAFWRAGRFPSE
Ga0137383_108200172	3300012199	Vadose Zone Soil	MVSTSEPISNVVISMTANQSTPRPRALQAVRRAARALKPINDQQVRMWEAFWRAGRF
Ga0137382_100784531	3300012200	Vadose Zone Soil	GSMVSTSEPISNVVISMTANQSTPRPRALQAVRRAARALKPINDQQVRMWEAFWRAGRFPSE*
Ga0137382_112169141	3300012200	Vadose Zone Soil	MVSTSEPISNMVISMTANQSTPRPRALRAVRRAARALKPLNDQQVQMWEAFWRAGRFPSD
Ga0137365_100564934	3300012201	Vadose Zone Soil	MVSTSEPISNMVISMTANQSTPRPRALQAVRRAARALKPINDQQVQMWEAFWRACRFPSD
Ga0137365_101674203	3300012201	Vadose Zone Soil	APRHRALQPVRRAARALKRINDEQVSMWEAFWRANRFPAG*
Ga0137386_107225582	3300012351	Vadose Zone Soil	MVSTSEPISNVVISMTANQSTPRPRALQAVRRAARALKPINDQQVLMWEAFWRAGRFPSE
Ga0137371_103411461	3300012356	Vadose Zone Soil	ALARGSMVSTSEPISNMVISMTANQSTPRPRALRAVRRAARALKPLNDQQVQMWEAFWRAGRFPSD*
Ga0126375_102387641	3300012948	Tropical Forest Soil	MTANQPTPRPGAAQAVRRVTRAFKRINDQQILMFEALWRAGRFPTD*
Ga0126375_118741711	3300012948	Tropical Forest Soil	LQNVVISMTANQPTPRSRAPQAVRRITRAFKRINDEQVMMWEAFWRANRFPTE*
Ga0126369_103181812	3300012971	Tropical Forest Soil	MVSTSERLTRNVVISMTANQPTPRPRALHAVRRAARALKSVNDQQVAMWEAFWRDGRFPEN*
Ga0132258_103306946	3300015371	Arabidopsis Rhizosphere	ISMTANKPAPRPRALQPVRRAARALKRINDEQVSMWEAFWRANRFPAD*
Ga0182041_106560292	3300016294	Soil	MQVISMTANQSTPRPRALQAVRRAARALKSTNDQQALMWEAFWRAGRFPEN
Ga0182033_104603482	3300016319	Soil	MRVISMTANQSTPRPRALQAVRRAARALKSANDQQTLMWEAFWQAGRFPPE
Ga0182037_111834971	3300016404	Soil	RAWQTVRRAARALKNVNDQQVLMWESFLRSNRFPTE
Ga0187785_104489232	3300017947	Tropical Peatland	MVSTSERISKQVISMTANQSTPRPRALQAVRRAARALRSTNDQQVQMWESFWRAGRFPSE
Ga0187779_103297992	3300017959	Tropical Peatland	VVISMTATQSARRPRALQAVRRAARALKSANDEQVLMWEAFWRASRFPEN
Ga0187779_104566291	3300017959	Tropical Peatland	PGWCQDTTREVVIAMTANQPAPRPRAWQAVRRAAHALKATNDQQVLMWEAFWRANRFPGD
Ga0187767_100218943	3300017999	Tropical Peatland	MTANQPAPRPRAWQAVRRAAHALKATNDQQVLMWEAFWRANRFPGD
Ga0187788_105636121	3300018032	Tropical Peatland	MVSTSERISNVVISMSANQSTPRPRALQAVRRAARALNSINDQQVKMWEAFWQAGRFPSK
Ga0187766_103205242	3300018058	Tropical Peatland	MTATQSARRPRALQAVRRAARALKSVNDEQVLMWEAFWRAN
Ga0187765_100433233	3300018060	Tropical Peatland	MTANQATSRPRALQAVRRAARALRSTNDQQTAMWEAFWRAGRFPAE
Ga0187765_109473732	3300018060	Tropical Peatland	VISMTANQPRALRVVRRAARALKSTNDQQVAMWETFWKAGRFPEN
Ga0187774_109562252	3300018089	Tropical Peatland	VGGLSARLDGVISERISNVVISMSANQSTPRPRVLQAVRRAARALNSVNDQQVQMWEAFWQAGRFPPK
Ga0210404_108492671	3300021088	Soil	MSANQSTPRPRALQAVRRAARAFNSINDQQVQMWEAFWRAGRYPSDH
Ga0126371_113551061	3300021560	Tropical Forest Soil	MRVISMTANQSTSRPRALQAVRRAARALKSTNDQQVQMWESFWRAGRFPSE
Ga0126371_114388771	3300021560	Tropical Forest Soil	VISMTANQPTPRPRALHAVRRAVRALKTGNDQQVAMWEAFWRAGRFPEN
Ga0126371_114519361	3300021560	Tropical Forest Soil	MSANQSTPRPRALQAVRRAARALNSINDQQVKMWEAFWQAGRFPPK
Ga0126371_121300412	3300021560	Tropical Forest Soil	MVSATSDSRNRNVVISMTANQPTPRPRAWQTVRRAARALKNANDQQVLMWEAFLRSNRFP
Ga0207693_101193203	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSANQSTRRPRALQAVRRAARALNSINDQQVQMWEAFWRAGRFPSDH
Ga0207687_110889302	3300025927	Miscanthus Rhizosphere	QPRALRAVRRAARALSNVNDQQVAMWEAYWRAGRFPPK
Ga0207700_114971012	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MVSTSERISKQVISMSANQSTRRPRALQAVRRAARAINSINDQQVQMWEAFWRAGRYPSD
Ga0207712_115053221	3300025961	Switchgrass Rhizosphere	LEPSSKVSTSERLTRNVVIAMTANQPRALRAVRRAARALSNVNDQQVAMWEAYWRAGRFPPK
Ga0207677_109606531	3300026023	Miscanthus Rhizosphere	KVSTSERLTRNVVIAMTANQPRALRAVRRAARALSNVNDQQVAMWEAYWRAGRFPPK
Ga0207641_111082531	3300026088	Switchgrass Rhizosphere	ALEPSSKVSTSERLTRNVVIAMTANQPRALRAVRRAARALSNVNDQQVAMWEAYWRAGRFPPK
Ga0207683_103358411	3300026121	Miscanthus Rhizosphere	ERGALEPSSKVSTSERLTRNVVIAMTANQPRALRAVRRAARALSNVNDQQVAMWEAYWRAGRFPPK
Ga0257162_10297982	3300026340	Soil	MVSTSEPISNVVISMTANQSTPRPRALQAVRRAARALKPVNDQQVLMWETFWR
Ga0257147_10033842	3300026475	Soil	MVSTSEPISNVVISMTANQSTPRPRALQAVRRAARALKPINDQQVLMWEAFWRGGRFPSE
Ga0209178_13709661	3300027725	Agricultural Soil	VSTSERISKQVISMSANQSTRRPRALQAVRRAARALNSINDQQVQMWEAFWRAGRFPSDH
Ga0209465_106447201	3300027874	Tropical Forest Soil	MTANQPTPRPRAWRAVGRAARALKSVNDQQVSMWEAFWRANRFPADR
Ga0307296_100436992	3300028819	Soil	MTANKPAPRPRALQPVRRAARALKRINDEQVSMWEAFWRANRFPAD
Ga0307497_106882301	3300031226	Soil	MTANQPTPRPRAWQAVGRAARALKSVNDQQVSMWEAFWRSNRFPAD
Ga0318516_102342291	3300031543	Soil	MQVISMTANQSTPRPRALRAVRRAARALKSANDQQTLMWEAFWQ
Ga0318534_101640293	3300031544	Soil	MVSTPNGSANAVISMTANQSTPRPRALQAVRRAARALKSTNDQQVQMW
Ga0318571_104495541	3300031549	Soil	MQVISMTANQSTPRPRALRAVRRAARALKSANDQQTLMWEAFWQAGRFPSE
Ga0318573_100483271	3300031564	Soil	MVSTPNGSANAVISMTANQSTPRPRALQAVRRAARALKSANDQQTLMWEAFWQAGRFPPE
Ga0318573_104897021	3300031564	Soil	MQVISMTANQSTPRPRALRAVRRAARALKSANDQQTLMW
Ga0318515_103075391	3300031572	Soil	MVSTPNGSANAVISMTANQSTPRPGALQAVRRAARALKSANDQQTLMWEAFWQAGRFPSE
Ga0310915_102156132	3300031573	Soil	MVSTPNGSANAVISMTANQSTPRPGALQAVRRAARALKSANDQQTLMWEAFWQAGRFPPE
Ga0318496_101825582	3300031713	Soil	MVSTSEQISKQVISMSANQSTPRPRALQAVRRVARAFNSINDQQVQMWEAFWRAGRYPSD
Ga0318496_105804121	3300031713	Soil	PRPGALQAVRRAARALKSANDQQTLMWEAFWQAGRFPPE
Ga0306917_113338141	3300031719	Soil	MQVISMTANQSTPRPRALRAVRRAARALKSANDQQTLMWEAFWQAGRFPPE
Ga0318493_100281571	3300031723	Soil	MVSTPNGSANAVISMTANQSTPRPRALQAVRRAARALKYANDQQTLMWEAFWQAGRFPPE
Ga0318493_106719581	3300031723	Soil	MVSTSEQISKQVISMSANQSTPRPRALQAVRRAARALNSINDQQVQMWEAFWRAGRYPSD
Ga0306918_111724191	3300031744	Soil	MVSTPNGSANAVISMTANQSTPRPRALQAVRRAARALKSTNDQQVLMWEAFWQAGRFPPE
Ga0318546_103558271	3300031771	Soil	QSTPRPRALRAVRRAARALKSANDQQTLMWEAFWQAGRFPSE
Ga0318552_106926781	3300031782	Soil	MRVISMTANQSTSRPRALQAVRRVARAFNSINDQQVQMWEAFWRAGRYPSDH
Ga0318497_106244382	3300031805	Soil	QSTPRPGALQAVRRAARALKSANDQQTLMWEAFWQAGRFPPE
Ga0318568_101036441	3300031819	Soil	MVSTPNGSANAVISMTANQSTPRPGALQAVRRAARALKSANDQQTLMWEAFW
Ga0318512_107239462	3300031846	Soil	MVSTPNGSANAVISMTANQSTPRPRALQAVRRAARALKSANDQQTLMWEAFWQAGRFPSE
Ga0318551_108521371	3300031896	Soil	VVISMTANQPTPRPRAWQTVRRAARALKYANDQQVLMWEAFLRSNRFPKE
Ga0306923_102932403	3300031910	Soil	ANQSTPRPRALQAVRRAARALKSANDQQTLMWEAFWQAGRFPPE
Ga0306923_118481071	3300031910	Soil	MQVISMTANQSTPRPRALQAVRRAARALKSANDQQTLMWEAFWQAGRFPPE
Ga0306921_112125701	3300031912	Soil	ANQSTPRPRALQAVRRAARALKSANDQQTLMWEAFWQAGRFPSE
Ga0306922_100841246	3300032001	Soil	ANRPTPRPRAWQTVRRAARALKNVNDQQVLMWESFLRSNRFPTE
Ga0318514_102486471	3300032066	Soil	MRVISMTANQSTSRPRALQAVRRAARALKSTNDQQVLMWEAFWQAGRFPSE
Ga0318524_105502701	3300032067	Soil	GQGALARGSMVSTTEQISKQVISMSANQSTPRPRALQAVRRVARAFNSINDQQVQMWEAFWRAGRYPSDH
Ga0335085_104621443	3300032770	Soil	PRPRAWQAVRRAAHALKATNDQQVLMWEAFWRANRFPGN
Ga0335079_1000297314	3300032783	Soil	VVISMTASQPARRPRGLQAVRRAARALKASNDEQVLMWEAFWRTNRFPAD
Ga0335079_101171523	3300032783	Soil	VISMTANQPTRGPRALRAVRRAARALSSVNDQQVQMWEAFWRAGRFPTD
Ga0335079_106474142	3300032783	Soil	MRVISMSANQSTPRPRALQAVRRAARALNSINGQQVQMWEAFWRAGRFPSD
Ga0335078_118231541	3300032805	Soil	VIAMTANQPAPRPRAWRAVRRAAHALKATNDQQVLMWEAFWRANRFPDN
Ga0335080_105418051	3300032828	Soil	MSANQSTPRPRALQAVRRAARALNSINGQQVQMWEAFWRAGRFPSD
Ga0335080_116334381	3300032828	Soil	MVSTSERLTRNVVISMTANQPRALRAVRRAARALSSVNDQQVAMWEAYWRAGRFPAK
Ga0335081_100116449	3300032892	Soil	MTASQPARRPRGLQAVRRAARALKASNDEQVLMWEAFWRTNRFPAD
Ga0335083_102674761	3300032954	Soil	MVSRHNQRVVIAMTANQPAPRPRAWQAVRRAAHALKATNDQQVLMWEAFWRANRFPG
Ga0335083_103752223	3300032954	Soil	QPAPRPRAWQAVRRAAHALKATNDQQVLMWEAFWRANRFPGD
Ga0335083_105307341	3300032954	Soil	PAPRPRVWQAVRRAAHALKATNDQQVLMWEAFWRANRFPGN
Ga0335077_104934901	3300033158	Soil	MVSGTTREVVIAMTANQPAPRPRAWRAVRRAAHALKATNDQQVLMWEAFWRANRFPGD
Ga0335077_108772572	3300033158	Soil	MTANQPRALRAVRRAARALSSVNDQQVAMWEAYWRAGRFPAK
Ga0373959_0047484_3_143	3300034820	Rhizosphere Soil	VVIAMTANQPRALRAVRRAARALSSVNDQQVAMWEAYWRAGRFPPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045726

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences