Metagenome / Metatranscriptome Family F045558

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045558
Family Type	Metagenome / Metatranscriptome
Number of Sequences	152
Average Sequence Length	62 residues
Representative Sequence	MIPIKRVSDNMEGYAFLVIDYSQEHDLLFTCAMDNGEIWTLNNKEIRFCKNISLDRKK
Number of Associated Samples	113
Number of Associated Scaffolds	152

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	12.00 %
% of genes near scaffold ends (potentially truncated)	19.74 %
% of genes from short scaffolds (< 2000 bps)	61.18 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.079 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake (21.053 % of family members)
Environment Ontology (ENVO)	Unclassified (61.184 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (65.789 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.98% β-sheet: 37.21% Coil/Unstructured: 55.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 152 Family Scaffolds
PF12705	PDDEXK_1	4.61
PF00216	Bac_DNA_binding	3.29
PF01223	Endonuclease_NS	2.63
PF02562	PhoH	1.97
PF00149	Metallophos	1.97
PF12728	HTH_17	1.97
PF11325	DUF3127	1.32
PF10269	Tmemb_185A	1.32
PF05996	Fe_bilin_red	1.32
PF04308	RNaseH_like	1.32
PF14528	LAGLIDADG_3	1.32
PF01583	APS_kinase	1.32
PF01844	HNH	1.32
PF14359	DUF4406	0.66
PF10686	YAcAr	0.66
PF08774	VRR_NUC	0.66
PF01476	LysM	0.66
PF00644	PARP	0.66
PF06114	Peptidase_M78	0.66
PF09612	HtrL_YibB	0.66
PF01541	GIY-YIG	0.66
PF13662	Toprim_4	0.66
PF01555	N6_N4_Mtase	0.66
PF17164	DUF5122	0.66
PF04851	ResIII	0.66
PF13392	HNH_3	0.66
PF09834	DUF2061	0.66
PF13489	Methyltransf_23	0.66
PF00856	SET	0.66
PF13578	Methyltransf_24	0.66
PF05732	RepL	0.66
PF13619	KTSC	0.66
PF00118	Cpn60_TCP1	0.66
PF00535	Glycos_transf_2	0.66
PF00908	dTDP_sugar_isom	0.66
PF13385	Laminin_G_3	0.66
PF13521	AAA_28	0.66
PF02195	ParBc	0.66
PF14279	HNH_5	0.66
PF10127	RlaP	0.66
PF03796	DnaB_C	0.66
PF11195	DUF2829	0.66
PF03837	RecT	0.66
PF06745	ATPase	0.66
PF13455	MUG113	0.66
PF00574	CLP_protease	0.66
PF11913	DUF3431	0.66

COG ID	Name	Functional Category	% Frequency in 152 Family Scaffolds
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	3.29
COG1864	DNA/RNA endonuclease G, NUC1	Nucleotide transport and metabolism [F]	2.63
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	1.97
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	1.97
COG0529	Adenylylsulfate kinase or related kinase	Inorganic ion transport and metabolism [P]	1.32
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.32
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	1.32
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.66
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.66
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.66
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	0.66
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.66
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	0.66
COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme	Cell wall/membrane/envelope biogenesis [M]	0.66
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.66
COG3723	Recombinational DNA repair protein RecT	Replication, recombination and repair [L]	0.66

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.08 %
All Organisms	root	All Organisms	30.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.08 %
cellular organisms	root	All Organisms → cellular organisms	18.42 %
Viruses	superkingdom	All Organisms → Viruses	12.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.08 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	12.50 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	7.24 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	5.92 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.61 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.08 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	7.24 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	4.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.61 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.95 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.32 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	1.32 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	0.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.66 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.08 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	7.24 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	4.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.61 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	3.95 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	1.32 %
unclassified Spirochaetota	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota	1.32 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	0.66 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.08 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	7.24 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	4.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.61 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3.95 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.32 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.32 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.66 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.08 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	5.26 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	4.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.61 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	1.97 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.32 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.32 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.66 %
Lillamyvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Lillamyvirus	0.66 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.66 %
Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	0.66 %
Elemovirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Elemovirus	0.66 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.08 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5.26 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	4.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.61 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1.97 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.32 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.32 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.66 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.66 %
Lillamyvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Lillamyvirus	0.66 %
Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	0.66 %
Elemovirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Elemovirus	0.66 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.08 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5.26 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	4.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.61 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.32 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.32 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	0.66 %
Cyclobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae	0.66 %
Crocinitomicaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae	0.66 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.66 %
Lillamyvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Lillamyvirus	0.66 %
Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	0.66 %
Elemovirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Elemovirus	0.66 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.08 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5.26 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	4.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.61 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.32 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.32 %
Spirosoma	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma	0.66 %
Brumimicrobium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → Brumimicrobium	0.66 %
Cyclobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae	0.66 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.66 %
Lillamyvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Lillamyvirus	0.66 %
Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	0.66 %
Elemovirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Elemovirus	0.66 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.08 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5.26 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	4.61 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.61 %
Spirochaetota bacterium	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	1.32 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.32 %
Brumimicrobium mesophilum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → Brumimicrobium → Brumimicrobium mesophilum	0.66 %
Spirosoma	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma	0.66 %
Cyclobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae	0.66 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.66 %
Lillamyvirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Lillamyvirus	0.66 %
Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	0.66 %
Elemovirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Elemovirus	0.66 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.66 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.66 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_106127805	Not Available	898	Open in IMG/M
3300001839\|RCM40_1110436	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300002447\|JGI24768J34885_10000016	Not Available	42379	Open in IMG/M
3300002447\|JGI24768J34885_10099906	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300002471\|metazooDRAFT_1499151	Not Available	1694	Open in IMG/M
3300002835\|B570J40625_100610194	Not Available	997	Open in IMG/M
3300003815\|Ga0007856_1000136	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	7971	Open in IMG/M
3300004448\|Ga0065861_1025954	All Organisms → cellular organisms → Bacteria	5721	Open in IMG/M
3300004777\|Ga0007827_10077366	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300004795\|Ga0007756_11612364	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	727	Open in IMG/M
3300005527\|Ga0068876_10083475	All Organisms → Viruses → Predicted Viral	1915	Open in IMG/M
3300005528\|Ga0068872_10010743	Not Available	6489	Open in IMG/M
3300005662\|Ga0078894_10046805	All Organisms → cellular organisms → Bacteria → Proteobacteria	3648	Open in IMG/M
3300005662\|Ga0078894_10371274	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	1294	Open in IMG/M
3300005662\|Ga0078894_10381952	Not Available	1274	Open in IMG/M
3300005662\|Ga0078894_11311803	Not Available	608	Open in IMG/M
3300005758\|Ga0078117_1073303	All Organisms → cellular organisms → Bacteria	4292	Open in IMG/M
3300006118\|Ga0007859_1085335	Not Available	635	Open in IMG/M
3300007543\|Ga0102853_1070663	Not Available	629	Open in IMG/M
3300007547\|Ga0102875_1068783	Not Available	1147	Open in IMG/M
3300007559\|Ga0102828_1191593	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	522	Open in IMG/M
3300007590\|Ga0102917_1073328	Not Available	1206	Open in IMG/M
3300007639\|Ga0102865_1183975	Not Available	624	Open in IMG/M
3300007681\|Ga0102824_1195580	Not Available	534	Open in IMG/M
3300008113\|Ga0114346_1001887	Not Available	16164	Open in IMG/M
3300008113\|Ga0114346_1231943	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	705	Open in IMG/M
3300008261\|Ga0114336_1035350	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Spirosoma	4721	Open in IMG/M
3300008261\|Ga0114336_1178302	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	914	Open in IMG/M
3300008266\|Ga0114363_1185363	Not Available	655	Open in IMG/M
3300008267\|Ga0114364_1006404	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	13217	Open in IMG/M
3300008267\|Ga0114364_1048572	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	2784	Open in IMG/M
3300008267\|Ga0114364_1058769	Not Available	1342	Open in IMG/M
3300008267\|Ga0114364_1109547	Not Available	843	Open in IMG/M
3300008448\|Ga0114876_1048200	Not Available	1943	Open in IMG/M
3300008450\|Ga0114880_1004505	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Lillamyvirus	7456	Open in IMG/M
3300009085\|Ga0105103_10387723	Not Available	772	Open in IMG/M
3300009151\|Ga0114962_10030990	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	3669	Open in IMG/M
3300009152\|Ga0114980_10002791	Not Available	12176	Open in IMG/M
3300009154\|Ga0114963_10000032	Not Available	75075	Open in IMG/M
3300009154\|Ga0114963_10443123	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10	698	Open in IMG/M
3300009155\|Ga0114968_10007927	Not Available	7763	Open in IMG/M
3300009158\|Ga0114977_10005009	Not Available	8422	Open in IMG/M
3300009159\|Ga0114978_10039366	Not Available	3325	Open in IMG/M
3300009160\|Ga0114981_10006223	Not Available	7328	Open in IMG/M
3300009164\|Ga0114975_10081724	Not Available	1879	Open in IMG/M
3300009168\|Ga0105104_10943574	Not Available	508	Open in IMG/M
3300009181\|Ga0114969_10011594	Not Available	6464	Open in IMG/M
3300009181\|Ga0114969_10270256	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Elemovirus	1014	Open in IMG/M
3300009184\|Ga0114976_10217512	All Organisms → Viruses → Predicted Viral	1046	Open in IMG/M
3300009184\|Ga0114976_10356273	Not Available	773	Open in IMG/M
3300009185\|Ga0114971_10281191	Not Available	966	Open in IMG/M
3300009419\|Ga0114982_1000934	All Organisms → cellular organisms → Bacteria	15255	Open in IMG/M
3300009419\|Ga0114982_1021783	All Organisms → Viruses → Predicted Viral	2127	Open in IMG/M
3300009684\|Ga0114958_10353731	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	714	Open in IMG/M
3300010157\|Ga0114964_10082497	Not Available	1617	Open in IMG/M
3300010160\|Ga0114967_10169164	Not Available	1199	Open in IMG/M
3300010353\|Ga0116236_11419124	Not Available	526	Open in IMG/M
3300010354\|Ga0129333_10183318	Not Available	1909	Open in IMG/M
3300010354\|Ga0129333_10504403	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1060	Open in IMG/M
3300010370\|Ga0129336_10037875	All Organisms → Viruses → Predicted Viral	2906	Open in IMG/M
3300010885\|Ga0133913_10008173	Not Available	27294	Open in IMG/M
3300010885\|Ga0133913_10509269	Not Available	3171	Open in IMG/M
3300010885\|Ga0133913_10655267	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2752	Open in IMG/M
3300011268\|Ga0151620_1131196	Not Available	777	Open in IMG/M
3300011268\|Ga0151620_1182373	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	639	Open in IMG/M
3300011335\|Ga0153698_1097	Not Available	36531	Open in IMG/M
3300017747\|Ga0181352_1033391	Not Available	1546	Open in IMG/M
3300017754\|Ga0181344_1010080	Not Available	3045	Open in IMG/M
3300017754\|Ga0181344_1090783	Not Available	892	Open in IMG/M
3300017766\|Ga0181343_1001072	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11028	Open in IMG/M
3300017766\|Ga0181343_1008914	Not Available	3291	Open in IMG/M
3300017766\|Ga0181343_1039382	Not Available	1411	Open in IMG/M
3300017766\|Ga0181343_1163103	Not Available	618	Open in IMG/M
3300017778\|Ga0181349_1215695	Not Available	656	Open in IMG/M
3300017780\|Ga0181346_1051083	Not Available	1673	Open in IMG/M
3300017785\|Ga0181355_1000127	Not Available	29304	Open in IMG/M
3300020048\|Ga0207193_1086269	All Organisms → cellular organisms → Bacteria	2953	Open in IMG/M
3300020083\|Ga0194111_10096537	Not Available	2388	Open in IMG/M
3300020141\|Ga0211732_1007833	All Organisms → cellular organisms → Bacteria	5927	Open in IMG/M
3300020151\|Ga0211736_10220103	Not Available	684	Open in IMG/M
3300020160\|Ga0211733_10014547	Not Available	520	Open in IMG/M
3300020562\|Ga0208597_1050347	Not Available	789	Open in IMG/M
3300021131\|Ga0214206_1005225	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2217	Open in IMG/M
3300021519\|Ga0194048_10171815	Not Available	809	Open in IMG/M
3300021963\|Ga0222712_10233539	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1186	Open in IMG/M
3300021963\|Ga0222712_10461737	Not Available	759	Open in IMG/M
3300022407\|Ga0181351_1000055	Not Available	30807	Open in IMG/M
3300022752\|Ga0214917_10191675	Not Available	1020	Open in IMG/M
3300023179\|Ga0214923_10113116	Not Available	1794	Open in IMG/M
3300023179\|Ga0214923_10299410	Not Available	875	Open in IMG/M
3300023184\|Ga0214919_10141816	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1928	Open in IMG/M
3300023184\|Ga0214919_10652902	Not Available	608	Open in IMG/M
3300024289\|Ga0255147_1000251	Not Available	18762	Open in IMG/M
3300024343\|Ga0244777_10125824	Not Available	1657	Open in IMG/M
3300024346\|Ga0244775_10008217	Not Available	10115	Open in IMG/M
3300024346\|Ga0244775_10318170	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1288	Open in IMG/M
3300024346\|Ga0244775_11063005	Not Available	636	Open in IMG/M
3300025388\|Ga0208503_1000748	All Organisms → cellular organisms → Bacteria	5812	Open in IMG/M
3300025389\|Ga0208257_1003422	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → Brumimicrobium → Brumimicrobium mesophilum	3226	Open in IMG/M
3300025421\|Ga0207958_1046920	Not Available	636	Open in IMG/M
3300025889\|Ga0208644_1386560	Not Available	520	Open in IMG/M
3300026454\|Ga0256319_1087641	Not Available	611	Open in IMG/M
3300027204\|Ga0208924_123576	Not Available	504	Open in IMG/M
3300027563\|Ga0209552_1036050	Not Available	1440	Open in IMG/M
3300027659\|Ga0208975_1135238	Not Available	696	Open in IMG/M
3300027710\|Ga0209599_10000422	Not Available	28129	Open in IMG/M
3300027710\|Ga0209599_10005838	Not Available	4238	Open in IMG/M
3300027712\|Ga0209499_1102471	All Organisms → Viruses → Predicted Viral	1085	Open in IMG/M
3300027733\|Ga0209297_1383135	Not Available	502	Open in IMG/M
3300027736\|Ga0209190_1107459	All Organisms → Viruses → Predicted Viral	1275	Open in IMG/M
3300027741\|Ga0209085_1000002	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	192459	Open in IMG/M
3300027741\|Ga0209085_1063376	Not Available	1687	Open in IMG/M
3300027754\|Ga0209596_1001077	All Organisms → cellular organisms → Bacteria → Spirochaetes → unclassified Spirochaetota → Spirochaetota bacterium	24176	Open in IMG/M
3300027756\|Ga0209444_10068327	Not Available	1541	Open in IMG/M
3300027763\|Ga0209088_10011953	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4660	Open in IMG/M
3300027770\|Ga0209086_10108247	Not Available	1410	Open in IMG/M
3300027777\|Ga0209829_10331826	Not Available	610	Open in IMG/M
3300027793\|Ga0209972_10004583	Not Available	10386	Open in IMG/M
3300027793\|Ga0209972_10005166	Not Available	9667	Open in IMG/M
3300027798\|Ga0209353_10024191	Not Available	2844	Open in IMG/M
3300027798\|Ga0209353_10313182	Not Available	662	Open in IMG/M
3300027804\|Ga0209358_10000583	Not Available	31694	Open in IMG/M
3300027804\|Ga0209358_10362785	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	693	Open in IMG/M
3300027805\|Ga0209229_10037439	Not Available	2140	Open in IMG/M
3300027899\|Ga0209668_10001970	Not Available	8950	Open in IMG/M
3300027899\|Ga0209668_10471303	Not Available	830	Open in IMG/M
3300027899\|Ga0209668_10621675	Not Available	722	Open in IMG/M
3300027969\|Ga0209191_1001826	Not Available	13727	Open in IMG/M
3300027969\|Ga0209191_1080456	Not Available	1423	Open in IMG/M
3300028027\|Ga0247722_10117111	Not Available	976	Open in IMG/M
3300028392\|Ga0304729_1000277	Not Available	37710	Open in IMG/M
3300031786\|Ga0315908_10272367	Not Available	1414	Open in IMG/M
3300031786\|Ga0315908_10895511	Not Available	720	Open in IMG/M
3300031857\|Ga0315909_10501549	Not Available	838	Open in IMG/M
3300032092\|Ga0315905_10104962	Not Available	2847	Open in IMG/M
3300032092\|Ga0315905_10206577	Not Available	1930	Open in IMG/M
3300032092\|Ga0315905_11276534	Not Available	593	Open in IMG/M
3300032092\|Ga0315905_11299179	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	586	Open in IMG/M
3300033984\|Ga0334989_0000439	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	20343	Open in IMG/M
3300034012\|Ga0334986_0293949	Not Available	864	Open in IMG/M
3300034061\|Ga0334987_0097587	Not Available	2269	Open in IMG/M
3300034063\|Ga0335000_0646703	Not Available	588	Open in IMG/M
3300034101\|Ga0335027_0539802	Not Available	722	Open in IMG/M
3300034104\|Ga0335031_0563359	Not Available	680	Open in IMG/M
3300034108\|Ga0335050_0332797	Not Available	709	Open in IMG/M
3300034112\|Ga0335066_0019174	All Organisms → Viruses → Predicted Viral	4835	Open in IMG/M
3300034116\|Ga0335068_0432263	Not Available	623	Open in IMG/M
3300034167\|Ga0335017_0274375	Not Available	947	Open in IMG/M
3300034279\|Ga0335052_0038350	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae	2978	Open in IMG/M
3300034356\|Ga0335048_0436392	Not Available	641	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.68%
Host-Associated	Host-Associated	0.66%
Engineered	Engineered	0.66%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.39%
Terrestrial	Environmental → Terrestrial	3.29%
Plants	Host-Associated → Plants	0.66%
Wastewater	Engineered → Wastewater	0.66%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	82.89%
Marine	Environmental → Aquatic → Marine	12.50%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	3.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.66%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.66%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	44.74%
Lentic	Environmental → Aquatic → Freshwater → Lentic	28.29%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.26%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	4.61%
Coastal	Environmental → Aquatic → Marine → Coastal	3.29%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.29%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	3.29%
Lotic	Environmental → Aquatic → Freshwater → Lotic	2.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.32%
River	Environmental → Aquatic → Freshwater → River	1.32%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.66%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	44.08%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	23.68%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	5.26%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	4.61%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	3.29%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.29%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	3.29%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	2.63%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	2.63%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.97%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.32%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.32%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.66%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.66%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.66%

Habitat	Taxonomy	Distribution
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	21.05%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	17.11%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	11.84%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	5.92%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	5.26%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	4.61%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	3.95%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	2.63%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	1.97%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	1.97%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.97%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.97%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.97%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.97%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.97%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.32%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.32%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.32%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.32%
Lake	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake	0.66%
Freshwater Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic	0.66%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.66%
Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water	0.66%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.66%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	0.66%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	0.66%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.66%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.66%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.66%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	0.66%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.66%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.66%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001839	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM40, ROCA_DNA238_2.0um_Ob_C_3b	Environmental	Open in IMG/M
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental	Open in IMG/M
3300002471	Freshwater microbial communities from San Paulo Zoo lake, Brazil - MAY 2013	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300003815	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004777	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Jul07	Environmental	Open in IMG/M
3300004795	Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300005758	Cyanobacteria communities in tropical freswater systems - freshwater lake in Singapore	Environmental	Open in IMG/M
3300006118	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul07	Environmental	Open in IMG/M
3300007543	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-3	Environmental	Open in IMG/M
3300007547	Estuarine microbial communities from the Columbia River estuary - metaG 1547B-02	Environmental	Open in IMG/M
3300007559	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541	Environmental	Open in IMG/M
3300007590	Estuarine microbial communities from the Columbia River estuary - metaG 1562A-02	Environmental	Open in IMG/M
3300007639	Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02	Environmental	Open in IMG/M
3300007681	Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.753	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300008450	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigs	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009151	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130820_MF_MetaG	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009154	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG	Environmental	Open in IMG/M
3300009155	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_EF_MetaG	Environmental	Open in IMG/M
3300009158	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009164	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009181	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG	Environmental	Open in IMG/M
3300009184	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_EF_MetaG	Environmental	Open in IMG/M
3300009185	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140625_MF_MetaG	Environmental	Open in IMG/M
3300009419	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT	Environmental	Open in IMG/M
3300009684	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG	Environmental	Open in IMG/M
3300010157	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG	Environmental	Open in IMG/M
3300010160	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG	Environmental	Open in IMG/M
3300010353	AD_USCAca	Engineered	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010370	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNA	Environmental	Open in IMG/M
3300010885	northern Canada Lakes Co-assembly	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300011335	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Guman	Environmental	Open in IMG/M
3300017747	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.N	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017766	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.D	Environmental	Open in IMG/M
3300017778	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300017785	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.N	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300020083	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300m	Environmental	Open in IMG/M
3300020141	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_104 megahit1	Environmental	Open in IMG/M
3300020151	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1	Environmental	Open in IMG/M
3300020160	Freshwater lake microbial communities from Lake Erken, Sweden - P4710_105 megahit1	Environmental	Open in IMG/M
3300020562	Freshwater microbial communities from Lake Mendota, WI - 05MAY2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300021131	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 epilimnion	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300021963	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657D	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300022752	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BB	Environmental	Open in IMG/M
3300023179	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1510	Environmental	Open in IMG/M
3300023184	Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503	Environmental	Open in IMG/M
3300024289	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8h	Environmental	Open in IMG/M
3300024343	Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fraction	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025388	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE31Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025389	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025421	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jul07 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300026454	Metatranscriptome of freshwater microbial communities from St. Lawrence River, New York, United States - Law_Colum_RepA_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300027204	Estuarine microbial communities from the Columbia River estuary - metaG 1370B-3 (SPAdes)	Environmental	Open in IMG/M
3300027563	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027659	Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)	Environmental	Open in IMG/M
3300027710	Subsurface microbial communities from deep shales in Ohio, USA - Utica-3 well 1 S input2 FT (SPAdes)	Environmental	Open in IMG/M
3300027712	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_130208_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027733	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130805_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027741	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027754	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130807_MF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027756	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027777	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027793	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027798	Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027804	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN (SPAdes)	Environmental	Open in IMG/M
3300027805	Freshwater and sediment microbial communities from dead zone in Sandusky Bay, Ohio, USA (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027969	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_130626_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028027	Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 3H_FC	Environmental	Open in IMG/M
3300028392	Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_131016_MF_MetaG (v2)	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300033984	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Mar2001-rr0030	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034063	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Oct2008D10-rr0053	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034108	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Jun2014-rr0157	Environmental	Open in IMG/M
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M
3300034279	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163	Environmental	Open in IMG/M
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1061278053	3300001213	Wetland	MIPVYSIEHQMEGYAFLVIDYSQEHDLLFTVALDNGEIWTLNNKDLRFCKNVSMY
RCM40_11104362	3300001839	Marine Plankton	MIPIIRLSDKMEGYAFLVIDYSQEHDLLFTCAMDDGEIWTLNNKEIRFCKNISLDRKEI
JGI24768J34885_100000169	3300002447	Freshwater And Sediment	MIPIKRVSDNMEGYAFLVIDYSQEHDLLFTCAMDNGEIWTLNNKEVRFCKNISLDRR*
JGI24768J34885_100999062	3300002447	Freshwater And Sediment	IVRVSDNMKGYAFLVIDYSQEHDLMFTCAMNNGEIWTLKNSEIRVEENITLGRK*
metazooDRAFT_14991511	3300002471	Lake	MLPIYSVDHKMEGYAFLVIDYSQEHDLLFTCALDNGEIWTISNKKLRFCKNPTMDRKIISDQI*
B570J40625_1006101942	3300002835	Freshwater	MIPILRVSDGMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLTNKEIRFCKNISLERYNINL*
Ga0007856_10001362	3300003815	Freshwater	MLQLNPMIPIVRNSDQMNGFAFLVIDYSQEHYLLFTCAMDNGEIWTLYNTEISFQNNFSLQRDTK*
Ga0065861_10259545	3300004448	Marine	MIPIFRTSDKMQGYAFLVIDYSQEHNLLFTCAMDNGEIWTLNNLEIRFCKNISLDRK*
Ga0007827_100773661	3300004777	Freshwater	MLQLNPMIPIIRNSDQMNGFAFLVIDYSQEHHLLFTCAMDNGEIWTLYNTEISFQNNFSLQRDTK*
Ga0007756_116123643	3300004795	Freshwater Lake	MIPIIRVSDKMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLSNHDIRFCKNISLDRNEVKL*
Ga0068876_100834754	3300005527	Freshwater Lake	MMLQLNPMIPIFRISDNMEGYAILVIDYSQEHDLLFTCAMDNGEIWTLNNKEIRFCKNISLDRKI*
Ga0068872_1001074312	3300005528	Freshwater Lake	MIPIYSIEHKMEGYAFLVIDYSQEHDLLFTCALDNGEIWTISNKKLRFCHNPSLDRVKNAIAP*
Ga0078894_100468054	3300005662	Freshwater Lake	MMLQLNPMIPIVRVLDGMGGYAFLVIDYSQEHHILFTCAMDNGEIWTLNNKEIRFDKNVSMERTEIKLKNDT*
Ga0078894_103712744	3300005662	Freshwater Lake	MIPIIRVKDGMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLSNHDIRFCKNISMDRKEVKL*
Ga0078894_103819523	3300005662	Freshwater Lake	MIVQLNPMIPIKRIKDDMEGYAFLVIDYSQEHDILFTCAMDDGEIWTLNNKEIRFCKNISLDRK*
Ga0078894_113118033	3300005662	Freshwater Lake	MIPIIRVKDKMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLSNHDIRFCKNISLDRNEIKL*
Ga0078117_10733032	3300005758	Lake Water	MILQLNPMIPIKRVSDDMEGYAFLVIDYSQEHDILFTCAMDDGEIWTLSNKELRFCKNISLDRK*
Ga0007859_10853351	3300006118	Freshwater	MLQLNPMIPIIRNSDQMNGFAFLVIDYSQEHHLLFTCAMDNGEIWTLYNTEIKFQNNFSLQRD
Ga0102853_10706631	3300007543	Estuarine	PIKRVSDNMEGYAFLVIDYSQEHDLLFTCAMDDGEIWTLNNKEIRFCKNVSLDRK*
Ga0102875_10687833	3300007547	Estuarine	MIPILRVSDGMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLSNHDIRFCKNISLDRNEIKL*
Ga0102828_11915931	3300007559	Estuarine	MLQLNPTIPIIRISDNMKGYAFIVIDYSQEHDLYFVCAMNDGEIWTLNNRDIRMQSNITLDRK*
Ga0102917_10733282	3300007590	Estuarine	MVPIKRVSDDMEGYAFLVIDYSQEHDLLFTCAMDDGEIWTLSNKELRFCKNISLDRK*
Ga0102865_11839751	3300007639	Estuarine	MIPIIRVSDKMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLSNHDIRFCKNISLDRDEVKL*
Ga0102824_11955801	3300007681	Estuarine	MILQLNPMIPIIRKSDDMKGFAFLVIDYSQEHDLIFTCAMNDGEIWSIKNSELRFDTNISLGRNKI*
Ga0114346_100188713	3300008113	Freshwater, Plankton	MLQLNPMIPIVRVLDGMGGYAFLVIDYSQEHHILFTCAMDNGEIWTLNNKEIRFDKNVSMERTEIKLKNDT*
Ga0114346_12319433	3300008113	Freshwater, Plankton	MIPIIRISDGMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLSNHDIRFCKNISLDRKDVKIGN*
Ga0114336_10353506	3300008261	Freshwater, Plankton	MIPIVRVKDGMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLTNKEIRFCKNISLERYKINI*
Ga0114336_11783021	3300008261	Freshwater, Plankton	MIPIIRVSDKMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLSNHDIRFCKNVSLDRSEVKL*
Ga0114363_11853631	3300008266	Freshwater, Plankton	PIFRISDNMEGYAILVIDYSQEHDLLFTCAMDNGEIWTLNNKEIRFCKNISLDRKI*
Ga0114364_10064043	3300008267	Freshwater, Plankton	MLQLNPMIPIVRVSDNMKGYAFLVIDYSQEHDLMFTCAMNNGEIWTLKNSEIRVEQNISLGRL*
Ga0114364_10485728	3300008267	Freshwater, Plankton	VRVKDGMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLTNKEIRFCKNISLERYKINI*
Ga0114364_10587694	3300008267	Freshwater, Plankton	VRVKDGMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLSNKEIRFCKNISLDRNI*
Ga0114364_11095473	3300008267	Freshwater, Plankton	MILQLNLMIPIIRKSDDMKGFAFLVIDYSQEHDLIFTCAMNDGEIWSIKNSELRFDTNISLGRNKI*
Ga0114876_10482002	3300008448	Freshwater Lake	MIPIIRVSDKMEGYAFLVIDYSQEHDLLFTCAMDDGEIWTLNNKEIRFCKNISMERTNIKLDSLSNLL*
Ga0114880_100450511	3300008450	Freshwater Lake	MMLQLNPMLPIFRISDNMEGYAILVIDYSQEHDLLFTCAMDNGEIWTLNNKEIRFCKNISLDRKI*
Ga0105103_103877232	3300009085	Freshwater Sediment	MIPIYSIEHEMEGYAFLVIDYSQENDLLFTCALNNGEIWTISNKKLRFCKNLSLDRKKLSE*
Ga0105240_121673912	3300009093	Corn Rhizosphere	MEGYAFLVIDYSQEHNLLFTCAFDNGEIWTLSNQELRFCKNVSLDRKEII*
Ga0114962_100309905	3300009151	Freshwater Lake	MIPILRLSDGMEGYAFLVIDYTQEHHLLFTCALDNGEIWTLSNKDIRFQKNISLGRKYPPII*
Ga0114980_100027916	3300009152	Freshwater Lake	MMLQLNPMIPIIRVKDQMEGYAFLVIDYSQEHNILFTCAMSNGEIWTLSNKEVRFQKNISLDRKNTTYDTERNGDLPE*
Ga0114963_1000003268	3300009154	Freshwater Lake	MIPIKRISDQMEGYAFLVIDYSQEHDLLFTCAMDDGEIWTLNNKEIRFCKNITLERKA*
Ga0114963_104431232	3300009154	Freshwater Lake	MIIQLNPMIPIYRTSDGMEGYAFLVIDYSQEHNILFTCAMDNGEIWTLNNKEIRFSKNISLDRK*
Ga0114968_1000792712	3300009155	Freshwater Lake	MMLQLNPMIPIVRVSDKMEGFAFMVIDYSQEHTLLFVCGMDDGEIWTLNNKEIRFCKNVSMDRKNINYDGFIKD*
Ga0114977_100050092	3300009158	Freshwater Lake	MIPIIRVSDKMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLSNHNIRFCKNISLDRNEVKL*
Ga0114978_100393661	3300009159	Freshwater Lake	PIIRVKDQMEGYAFLVIDYSQEHNILFTCAMSNGEIWTLSNKEVRFQKNISLDRKNTTYDTERNGDLPG*
Ga0114981_1000622310	3300009160	Freshwater Lake	MMLQLNPMIPIIRVKDQMEGYAFLVIDYSQEHNILFTCAMSNGEIWTLSNKEVRFQKNISLDRKNTTYDTERNGDLPG*
Ga0114975_100817242	3300009164	Freshwater Lake	MILQLNPMIPIKRVSDNMEGYAFLVIDYSQEHDILFTCAMDDGEIWTLSNKELRFCKNISLDRK*
Ga0105104_109435742	3300009168	Freshwater Sediment	FRISDNMKGFAFLIIDYSQEHDLLFTCAMDDGEIWTLTNKEIRFCKNISLERYNINL*
Ga0114969_1001159413	3300009181	Freshwater Lake	MILQLNPTMPIIRVSDGMKGYAFLVIDHSQELDLLYVCAMDNGEISTLNNKAIRVQNNISLGRVNNS*
Ga0114969_102702563	3300009181	Freshwater Lake	MLPIVRVSDNMKGYVFLIIDYSQEHDLMFTCAMDDSEIWTLKNSDIRMDVNITLGRNEFD
Ga0114976_102175122	3300009184	Freshwater Lake	MIPIKRVSDGLEGYAFLVIDYSQEHDLLFTCAMDDGEIWTLNNKEIRFCKNISMDRING*
Ga0114976_103562732	3300009184	Freshwater Lake	MLPIYRLSDNMTGYAFLVIDYSQEHNLLFTCAMSNGEIWTLSNAEIKFQNNISLNRK*
Ga0114971_102811911	3300009185	Freshwater Lake	MILQLNPTMPIIRVSDGMKGYAFLVIDHSQELDLLYVCAMDNGEIWTLNNKTIRVQNNISLGRVNNS*
Ga0114982_10009341	3300009419	Deep Subsurface	MIPIFRVSDNMEGFAFLVIDYSQEHDLLFTCAMDDGKIWTLNNKEIRMPKNISLDRK*
Ga0114982_10217833	3300009419	Deep Subsurface	MIPMVRVSDGMKGYAMLVIDYSQEHDLLFTCAMDNGEVWTLGNKDIRMNVNITLNRIL*
Ga0114958_103537312	3300009684	Freshwater Lake	MSMLQLNPMIPVFRVSDNMEGYVFLVIDYSQEHDLLFTCAMDNGEIWTLSNKDIRFCKNISLDRK*
Ga0114964_100824973	3300010157	Freshwater Lake	MIPVYRMSDKMEGYAFILIDYSQEHDLLFTCAMDNGEIWTLSTKELRFCKNISLERFNQS
Ga0114967_101691642	3300010160	Freshwater Lake	MILQLNPTMPIIRVSDGMKGYAFLVIDHSQELDLLYVCAMDNGEIWTLNNKAIRVQTNISLGRVNNS*
Ga0116236_114191243	3300010353	Anaerobic Digestor Sludge	MVTQLNPMIPIIRVSDKMEGYAFLVIDYSQEHDLLFTCAMDDGEIWTLNNKEIRFC
Ga0129333_101833181	3300010354	Freshwater To Marine Saline Gradient	MIPIYSIEHKMEGYAFLVIDYSQEHDLLFTCALDNGEIWTISNKKLRFCKNPSMDRKIISD*
Ga0129333_105044032	3300010354	Freshwater To Marine Saline Gradient	MMLQLNPMIPIIRVSDNMEGYAFIVIDYSQEHDILFTCAMDNGEIWTLNNKEIRFCKNISLDRK*
Ga0129336_100378757	3300010370	Freshwater To Marine Saline Gradient	MMLQLNPMVPIIRVSDKMEGYAFLVIDYSQEHDLLFTCAMDDGEIWTLNNKEIRFCK
Ga0133913_1000817357	3300010885	Freshwater Lake	MIPIYRTSDGMEGYAFLVIDYSQEHNILFTCAMDNGEIWTLNNKEIRFSKNISLDRK*
Ga0133913_105092692	3300010885	Freshwater Lake	MLPVYSNKHNMDGYAFIVIDYSQEHDLYFVVALKNGEIWTLNNKDIRFQNNISLDREKK*
Ga0133913_106552676	3300010885	Freshwater Lake	MLQLNPMLPIVRNSDGMKGFAFLVIDYSQEHDLVFTCAMDDGHIWTLSNKVITFDNNITLNRIIANETK*
Ga0151620_11311961	3300011268	Freshwater	MEGFAFMCIDYSQEHNLLFVCAMDNGEIWTLSNHEIRFCKNISMDRKSINYGETTIKDTK
Ga0151620_11823731	3300011268	Freshwater	MIPIVRVSDGMEGYAFLIIDYSQEHNLLFTCAMDDGEIWTLSNKEIRFCKNISLDRNNCKIVRC*
Ga0153698_109725	3300011335	Freshwater	MLPIKRISDNMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLNNKELRFCKNISLERK*
Ga0181352_10333911	3300017747	Freshwater Lake	IPIYSIEHEMEGYAFLVIDYSQEHDLLFTCALSNGEIWTISNKKLRFCKNLSLDRKKLSE
Ga0181344_10100802	3300017754	Freshwater Lake	MIPIFSIEHNMEGYAFLVIDYSQEHDLLFTCALDNGEIWTINNKDLRFCYNRSLDRKKGPLSET
Ga0181344_10907831	3300017754	Freshwater Lake	HEMEGYAFLVIDYSQEHDLLFTCALSNGEIWTISNKKLRFCKNLSLDRKKLSE
Ga0181343_10010723	3300017766	Freshwater Lake	MMLQLNPMIPITRISDGMSGFAFLVIDYSQEHDLLFVCAMKNGEIWTLSNRDIRMQPNISLSRNMKY
Ga0181343_10089142	3300017766	Freshwater Lake	MIPIFSIEHNMEGYAFLVIDYSQEHDLLFTVALDNGEIWTINNKALRFCWNRSLDRVKK
Ga0181343_10393822	3300017766	Freshwater Lake	MIVQLNPMIPIKRVKDDMEGYAFLVIDYSQEHDILFTCAMDDGEIWTLNNKEIRFCKNISLDRK
Ga0181343_11631031	3300017766	Freshwater Lake	NKMMLQLNPMIPIVRVLDGMGGYAFLVIDYSQEHHILFTCAMDNGEIWTLNNKEIRFDKNVSMERTEIKLKNDT
Ga0181349_12156952	3300017778	Freshwater Lake	MILICRVSDKIEGYAFLVIDYSQEHNLLFSCAMDHGEIWTLSNKEIRFSKNISLDRKL
Ga0181346_10510832	3300017780	Freshwater Lake	MIPIKRVSDDLEGYAFLVIDYSQEHDLLFTCAMDDGEIWTLNNKEIRFCKNISMDRRMG
Ga0181355_100012735	3300017785	Freshwater Lake	YMIVQLNPMIPIKRVSDNMEGYAFLVIDYSQEHDLLFTCAMVNGEIWTLNNKEIRFCKNISLDRKK
Ga0207193_10862693	3300020048	Freshwater Lake Sediment	MIPITRNSDQMKGFAFLVIDYSQEHNLMFTCAMDNGEIWTLSNQDIRFCNNVSMKREIKK
Ga0194111_100965377	3300020083	Freshwater Lake	MLPIYSCKHNMEGYAFIVIDYSQEHDLYFVVALKNGEIWTLNNKDVKFQNNITLDRIKK
Ga0211732_100783313	3300020141	Freshwater	MMIQMNPTIPIVRVRDGMKGYAFICIDYSQEHDLYFTCGMEDGEIWTLNNKDIRMERNISLHRDEPNTGLKPITGL
Ga0211736_102201032	3300020151	Freshwater	DGLEGYAFLVIDYSQEHNLLFTCAMDNGEIWTLNNKQIRFCKNVSMDRKQVILGGTSEHP
Ga0211733_100145472	3300020160	Freshwater	MMIQMNPTIPIVRVKDGMKGYAFICIDYSQEHDLYFTCGMDDGEIWTLNNKDIRMERNISLHRDEPNMGLKPITGL
Ga0208597_10503471	3300020562	Freshwater	LRVSDGMEGYAFLVIDYSQEHNLLFTCAMDNGEIWTLTTKEIRFCKNISLERYNINL
Ga0214206_10052255	3300021131	Freshwater	MLQLNPMIPIVRNSDQMNGFAFLVIDYSQEHYLLFTCAMDNGEIWTLYNTEISFQNNFSLQRDTK
Ga0194048_101718153	3300021519	Anoxic Zone Freshwater	MILQLNPTMPIIRVSDGMKGYAFLVIDHSQELDLLYVCAMDNGEIWTLNNKAIRVQNNISLGRVNNS
Ga0222712_102335393	3300021963	Estuarine Water	MMLQLNPMIPIVRVLDGMGGYAFLVIDYSQEHHILFTCAMDNGEIWTLNNKEIRFDKNVSMERTEIKLKNDT
Ga0222712_104617372	3300021963	Estuarine Water	MMLQLNPMIPIVRVLDGMGGYAFLVTDYSQEHYLLFTCAMDDGEIWTLNNKEIRFDKNISMERTEIKLKNDT
Ga0181351_100005567	3300022407	Freshwater Lake	MIPIFRVSDNMEGYAFLVIDYSQEHNLLFSCAMDNGEIWTLSNKEIRFSKNISLDRKL
Ga0214917_101916752	3300022752	Freshwater	MIPVYSLRHNMQGYAFLVIDYSQEHNLLFTVALDNGEIWTLKNQELRFCKNASLDREKMEKT
Ga0214923_101131162	3300023179	Freshwater	MIPIKRVSDGLEGYAFLVIDYSQEHDLLFTCAMDDGEIWTLNNKEIRFCKNISMERK
Ga0214923_102994102	3300023179	Freshwater	MLQLNPMLPIYRLSDNMTGFAFLVIDYSQEHNLLFTCAMSNGEIWTLSNQEIKFQNNISLNRK
Ga0214919_101418164	3300023184	Freshwater	MLQLNPMIPIVRVSDGLEGYAFLVIDYSQEHDLLFTCAMDDGEIWTLSNKEIRF
Ga0214919_106529021	3300023184	Freshwater	MIPILRVSDGMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLSNHDIRFCKNVSLDRNEVK
Ga0214919_107630732	3300023184	Freshwater	DGMEGYAFIVIDYSQEHDLLFTCAMDDGEIWTLNNKEIRFCKNISMKRT
Ga0255147_100025143	3300024289	Freshwater	MIPIVRISDGMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLSNKEIRFCKNISLDRKDVK
Ga0244777_101258242	3300024343	Estuarine	MIVQLNPMIPIKRIKDDMEGYAFLVIDYSQEHDILFTCAMDDGEIWTLSNKEIRFCKNISLDRK
Ga0244775_1000821711	3300024346	Estuarine	MILQLNPMIPIIRKSDDMKGFAFLVIDYSQEHDLIFTCAMNDGEIWSIKNSELRFDTNISLGRNKI
Ga0244775_103181703	3300024346	Estuarine	MLQLNPTIPIIRISDNMKGYAFIVIDYSQEHDLYFVCAMNDGEIWTLNNRDIRMQSNITLDRK
Ga0244775_110630052	3300024346	Estuarine	MMLQLNPMLPIVRVSDGMEGYAFLVIDYSQEHYTLFTCAMDNGEIWTLNNKEIRFCKNISLDRKEVKL
Ga0208503_10007487	3300025388	Freshwater	MLQLNPMIPIVRNSDQMNGFAFLVIDYSQEHHLLFTCAMDNGEIWTLYNTEISFQNNFSLQRDTK
Ga0208257_10034228	3300025389	Freshwater	MLQLNPMIPIVRNSDQMNGFAFLVIDYSQEHYLLFTCAMDNGEIWTLYNTEISF
Ga0207958_10469201	3300025421	Freshwater	MLQLNPMIPIIRNSDQMNGFAFLVIDYSQEHHLLFTCAMDNGEIWTLYNTEIKFQNNFSLQRDNK
Ga0208644_13865601	3300025889	Aqueous	LDPMIPIYSVEHEMEGYAFLVIDYSQEHDLLFTCALNNGEIWTISNKKLRFCKNVSLDRKKIT
Ga0256319_10876411	3300026454	Freshwater	YSDEMEGYAFLVIDYSQEHNLLFTCAMDNGEIWTLSNKEIRFCKNISLDRHI
Ga0208924_1235762	3300027204	Estuarine	PIKRVSDNMEGYAFLVIDYSQEHDLLFTCAMDDGEIWTLNNKEIRFCKNVSLDRK
Ga0209552_10360504	3300027563	Freshwater Lake	MIPIKRVSDNMEGYAFLVIDYSQEHDLLFTCAMDNGEIWTLNNKEIRFCKNISLDRT
Ga0208975_11352381	3300027659	Freshwater Lentic	MIPIIRVSDKMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLSNHDIRFCKNISLDRNEVK
Ga0209599_100004227	3300027710	Deep Subsurface	MIPIIRVSDKMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLSNHDIRFCKNVSLDRSEVK
Ga0209599_1000583814	3300027710	Deep Subsurface	MIPIFRVSDNMEGFAFLVIDYSQEHDLLFTCAMDDGKIWTLNNKEIRMPKNISLDRK
Ga0209499_11024712	3300027712	Freshwater Lake	MSMLQLNPMIPVFRVSDNMEGYVFLVIDYSQEHDLLFTCAMDNGEIWTLSNKDIRFCKNISLDRK
Ga0209297_13831352	3300027733	Freshwater Lake	MLQLNPMIPIIRVKDQMEGYAFLVIDYSQEHNILFTCAMSNGEIWTLSNKEVRFQKNISLDRKNTTYDTERNGDLPE
Ga0209190_11074592	3300027736	Freshwater Lake	MMLQLNPMIPIVRVSDKMEGFAFMVIDYSQEHTLLFVCGMDDGEIWTLNNKEIRFCKNVSMDRKNINYDGFIKD
Ga0209085_1000002165	3300027741	Freshwater Lake	MIPIKRISDQMEGYAFLVIDYSQEHDLLFTCAMDDGEIWTLNNKEIRFCKNITLERKA
Ga0209085_10633765	3300027741	Freshwater Lake	MIPVYRMSDKMEGYAFLIIDYSQEHDLLFTCAMDNGEIWTLSTKELRFCKNISLERFNQS
Ga0209596_100107727	3300027754	Freshwater Lake	MILQLNPTMPIIRVSDGMKGYAFLVIDHSQELDLLYVCAMDNGEIWTLNNKAIRVQTNISLGRVNNS
Ga0209444_100683274	3300027756	Freshwater Lake	MIPIKRVSDNMEGYAFLVIDYSQEHDLLFTCAMDNGEIWTLNNKEIRFCKNISLDRKK
Ga0209088_100119538	3300027763	Freshwater Lake	MLQLNPMIPIIRVKDQMEGYAFLVIDYSQEHNILFTCAMSNGEIWTLSNKEVRFQKNISLDRKNTTYDTERNGDLPG
Ga0209086_101082479	3300027770	Freshwater Lake	MIPIIRVSDKMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLSNHDIRFCKNISLDR
Ga0209829_103318262	3300027777	Freshwater Lake	IMILQLNPMIPILRLSDGMEGYAFLVIDYTQEHHLLFTCALDNGEIWTLSNKDIRFQKNISLGRKYPPII
Ga0209972_1000458312	3300027793	Freshwater Lake	MMLQLNPMIPIFRISDNMEGYAILVIDYSQEHDLLFTCAMDNGEIWTLNNKEIRFCKNISLDRKI
Ga0209972_100051664	3300027793	Freshwater Lake	MIPIYSIEHKMEGYAFLVIDYSQEHDLLFTCALDNGEIWTISNKKLRFCHNPSLDRVKNAIAP
Ga0209353_100241914	3300027798	Freshwater Lake	MEGYAFLVIDYSQEHNLLFSCAMSDGEIWTLSNQDIRFSKNISLSRFSVKKEENTHIPSSSL
Ga0209353_103131823	3300027798	Freshwater Lake	MIVQLNPMIPIKRLHDDMEGYAFLVIDYSQEHDILFTCAMDDGEIWTMSNKEIRFCKNISLDRR
Ga0209358_1000058373	3300027804	Freshwater Lake	MIPIIRVSDGMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLSNKEIRFCKNISLDRSNIK
Ga0209358_103627851	3300027804	Freshwater Lake	MIPIIRVSDKMEGYAFLVIDYSQEHNLLFACAMDDGEIWTLSNHDIRF
Ga0209229_100374391	3300027805	Freshwater And Sediment	DPMIPVYSLQHQLEGYAFLVIDYSQEHDLLFTCALDNGEIWTISNKQLRFCHNPSLDRTK
Ga0209668_1000197017	3300027899	Freshwater Lake Sediment	MILQLNPMIPIKRISDNMEGYAFLVVDYSQEHDILFTCAMDDGEIWTLSNKELRFCKNISMGRYGKII
Ga0209668_104713032	3300027899	Freshwater Lake Sediment	MLQLNPMIPIYSIEHEMEGYAFLVIDYSQEHDLLFTCALSNGEIWTISNKKLRFCKNLSLDRKKLSE
Ga0209668_106216752	3300027899	Freshwater Lake Sediment	MIPIYSIEHEMEGYAFLVIDYSQEHDLLFTCALDNGEIWTISNKKLRFCKNPSMDRKKVS
Ga0209191_100182619	3300027969	Freshwater Lake	MIPIIRVSDKMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLSNHNIRFCKNISLDRNEVK
Ga0209191_10804562	3300027969	Freshwater Lake	MILQLNPMIPIKRVSDNMEGYAFLVIDYSQEHDILFTCAMDDGEIWTLSNKELRFCKNISLDRK
Ga0247722_101171113	3300028027	Deep Subsurface Sediment	MIPIVRVSDGMEGYAFLVIDYSQEHNLLFTCAMDDGEIWTLSNHDIRFCKNISLDRKEIK
Ga0304729_100027719	3300028392	Freshwater Lake	MNFTQNFIMILQLNPMIPILRLSDGMEGYAFLVIDYTQEHHLLFTCALDNGEIWTLSNKDIRFQKNISLGRKYPPII
Ga0315908_102723673	3300031786	Freshwater	MIVQLNPMIPIKRVKDDMEGYAFLVIDYSQEHDVLFTCAMDDGEIWTLSNKEIRFCKNISLDRK
Ga0315908_108955112	3300031786	Freshwater	MMLQLNPMLPIFRISDNMEGYAILVIDYSQEHDLLFTCAMDNGEIWTLNNKEIRFCKNISLDRKI
Ga0315909_105015493	3300031857	Freshwater	MIPIKRISDNLEGYAFLVIDYSQEHDLLFTCAMDDGEIWTLNNKEIRFCKNISMDRGIG
Ga0315905_101049624	3300032092	Freshwater	MIVQLNPMIPIKRIKDDMEGYAFLVIDYSQEHDILFTCAMDDGEIWTLNNKEIRFCKNISLDRK
Ga0315905_102065777	3300032092	Freshwater	MIPIKRVSDNLEGYAFLVIDYSQEHDLLFTCAMDDGEIWTLNNREIRFCKNISMDRRIG
Ga0315905_112765343	3300032092	Freshwater	MIVQLNPMIPIFRVSDKMEGCAFLVIDYSQEHNLLFTCAMENGEIWTLSNKEIRFCKNISLDRNTINQK
Ga0315905_112991793	3300032092	Freshwater	MMPIKRVSDNLEGYAFLVIDYSQEHDLLFTCAMDDGEIWTLSNKEIRFCKNISMDRKI
Ga0334989_0000439_3880_4077	3300033984	Freshwater	MIPIVRASDGMKGYAMLVIDYSQEHDLLFCCAMDNGEIWTLGNKDIRMNVNITLNRIYEKGKQRG
Ga0334986_0293949_279_482	3300034012	Freshwater	MLQLNPMIPIYSIEHEMEGYAFLVIDYSQEHDLLFTCALSNGEIWTISNKKLRFCKNLSLDRKKPSE
Ga0334987_0097587_1636_1833	3300034061	Freshwater	MILQLNPMIPIMRYSDGMEGYAFLVIDYSQEHNILFTCAMDNGEIWTLSNKEIRFCKNISLDRNI
Ga0335000_0646703_328_513	3300034063	Freshwater	MIPILRVSDGMEGYAFLVIDYSQEHNLLFTCAMDNGEIWTLTNKEIRFCKNISLERYNIN
Ga0335027_0539802_33_218	3300034101	Freshwater	MIPIYSIEHEMEGYAFLVIDYSQEHDLLFTCALSNGEIWTISNKKLRFCKNLSLDRKKPS
Ga0335031_0563359_506_679	3300034104	Freshwater	MIPIFRVSDNMEGYAFLVIDYSQEHNLLFTCAMDNGEIWTLSNKEIRFCKNISLDRK
Ga0335050_0332797_202_417	3300034108	Freshwater	MLQLNPMIPIVRVLDGMGGYAFLVIDYSQEHHILFTCAMDNGEIWTLNNKEIRFDKNVSMERTEIKLKNDT
Ga0335066_0019174_246_431	3300034112	Freshwater	MIPIVRVSDKMEGYAFLVIDYSQEHNLLFTCAMDDGQIWTLTNKEIRFCKNISLERYNIN
Ga0335068_0432263_433_609	3300034116	Freshwater	MIPIFRVSDNMEGYAFLVIDYSQEHNLLFTCAMDNGEIWTLSNKEIRFCKNISLDRKQ
Ga0335017_0274375_546_722	3300034167	Freshwater	MIPIVRDSDGMKGYAMLVIDYSQEHDLLFCCAMDNGEIWTLGNKDIRMNVNITLNRML
Ga0335052_0038350_2097_2273	3300034279	Freshwater	MLPIKRISDKMEGYAFLVIDYSQEHDLLFTCAMDNGEIWTLNNREITVCKNISLERII
Ga0335048_0436392_4_201	3300034356	Freshwater	MIPIVRVLDGMGGYAFLVIDYSQEHHILFTCAMDNGEIWTLNNKEIRFDKNVSMERTEIKLKNDT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045558

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences