Metagenome / Metatranscriptome Family F045411

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F045411
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	45 residues
Representative Sequence	VSSWTPQRVLDAAAAMEWVPGGAIELRTDDYRLIRYPDVVLDPTF
Number of Associated Samples	135
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.34 %
% of genes near scaffold ends (potentially truncated)	99.35 %
% of genes from short scaffolds (< 2000 bps)	94.12 %
Associated GOLD sequencing projects	130
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (52.288 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (24.183 % of family members)
Environment Ontology (ENVO)	Unclassified (20.261 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.176 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.70% β-sheet: 10.96% Coil/Unstructured: 75.34%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF00753	Lactamase_B	10.46
PF01663	Phosphodiest	4.58
PF00580	UvrD-helicase	2.61
PF07690	MFS_1	2.61
PF11298	DUF3099	2.61
PF13673	Acetyltransf_10	1.31
PF04672	Methyltransf_19	1.31
PF13191	AAA_16	0.65
PF00456	Transketolase_N	0.65
PF00581	Rhodanese	0.65
PF00583	Acetyltransf_1	0.65
PF10722	YbjN	0.65
PF00903	Glyoxalase	0.65
PF07836	DmpG_comm	0.65
PF13305	TetR_C_33	0.65
PF09900	DUF2127	0.65
PF00378	ECH_1	0.65
PF12679	ABC2_membrane_2	0.65
PF13380	CoA_binding_2	0.65
PF09290	AcetDehyd-dimer	0.65
PF00291	PALP	0.65
PF12697	Abhydrolase_6	0.65
PF00857	Isochorismatase	0.65
PF07714	PK_Tyr_Ser-Thr	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	2.61
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.61
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	2.61
COG3973	DNA helicase IV	Replication, recombination and repair [L]	2.61
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	0.65
COG0119	Isopropylmalate/homocitrate/citramalate synthases	Amino acid transport and metabolism [E]	0.65
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.65
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.65
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	0.65
COG4569	Acetaldehyde dehydrogenase (acetylating)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.29 %
Unclassified	root	N/A	47.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.29 %
Unclassified	root	N/A	47.71 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.29 %
Unclassified	root	N/A	47.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	45.75 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	42.48 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.96 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28.76 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	2.61 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1.96 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3.92 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	2.61 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.61 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.96 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.96 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.31 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.65 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.65 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	3.92 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.61 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.96 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.96 %
Ralstonia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia	1.31 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1.31 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.65 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.65 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.61 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	1.96 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1.96 %
Ralstonia solanacearum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia solanacearum	1.31 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1.31 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.65 %
Kutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	0.65 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.65 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1.96 %
Actinomadura verrucosospora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura verrucosospora	1.31 %
Ralstonia solanacearum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia solanacearum	1.31 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1.31 %
Geodermatophilus amargosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	0.65 %
unclassified Kutzneria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria → unclassified Kutzneria	0.65 %
Streptomyces cellulosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces cellulosae	0.65 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.65 %
unclassified Actinomadura	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura	0.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.65 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.71 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1.96 %
Actinomadura verrucosospora	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura verrucosospora	1.31 %
Ralstonia solanacearum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia solanacearum	1.31 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	1.31 %
Kutzneria sp. 744	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria → unclassified Kutzneria → Kutzneria sp. 744	0.65 %
Actinomadura sp. CNU-125	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. CNU-125	0.65 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.65 %
Geodermatophilus amargosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	0.65 %
Streptomyces cellulosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces cellulosae	0.65 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.65 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.65 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q01AKMF6	Not Available	555	Open in IMG/M
2170459024\|GZRSKLJ01E2WVZ	Not Available	526	Open in IMG/M
3300004092\|Ga0062389_103210908	Not Available	612	Open in IMG/M
3300005434\|Ga0070709_10168806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1527	Open in IMG/M
3300005435\|Ga0070714_101154046	Not Available	755	Open in IMG/M
3300005435\|Ga0070714_101752136	Not Available	607	Open in IMG/M
3300005435\|Ga0070714_101837657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	591	Open in IMG/M
3300005435\|Ga0070714_102488749	Not Available	502	Open in IMG/M
3300005436\|Ga0070713_100727564	Not Available	948	Open in IMG/M
3300005436\|Ga0070713_101171952	Not Available	743	Open in IMG/M
3300005436\|Ga0070713_101418883	Not Available	673	Open in IMG/M
3300005439\|Ga0070711_100960622	Not Available	732	Open in IMG/M
3300005456\|Ga0070678_101396621	Not Available	654	Open in IMG/M
3300005471\|Ga0070698_101500036	Not Available	625	Open in IMG/M
3300005529\|Ga0070741_10075955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3737	Open in IMG/M
3300005534\|Ga0070735_10857707	Not Available	534	Open in IMG/M
3300005556\|Ga0066707_11033482	Not Available	500	Open in IMG/M
3300005564\|Ga0070664_101679709	Not Available	602	Open in IMG/M
3300005843\|Ga0068860_100345934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1462	Open in IMG/M
3300006028\|Ga0070717_10596912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1001	Open in IMG/M
3300006032\|Ga0066696_10828275	Not Available	590	Open in IMG/M
3300006050\|Ga0075028_100766133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	586	Open in IMG/M
3300006086\|Ga0075019_10611829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	684	Open in IMG/M
3300006163\|Ga0070715_10156636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1121	Open in IMG/M
3300006175\|Ga0070712_101669860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300006578\|Ga0074059_12149980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1101	Open in IMG/M
3300006800\|Ga0066660_11562329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	521	Open in IMG/M
3300006804\|Ga0079221_11487163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300006854\|Ga0075425_101202036	Not Available	861	Open in IMG/M
3300006953\|Ga0074063_14166469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	776	Open in IMG/M
3300009012\|Ga0066710_102249450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	794	Open in IMG/M
3300009098\|Ga0105245_10841097	Not Available	957	Open in IMG/M
3300009137\|Ga0066709_101038841	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300009698\|Ga0116216_10133794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1525	Open in IMG/M
3300009700\|Ga0116217_10038582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3562	Open in IMG/M
3300010343\|Ga0074044_10993970	Not Available	550	Open in IMG/M
3300010343\|Ga0074044_11052800	Not Available	533	Open in IMG/M
3300010360\|Ga0126372_11074969	Not Available	821	Open in IMG/M
3300010868\|Ga0124844_1104853	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300010876\|Ga0126361_10645031	All Organisms → cellular organisms → Bacteria → Terrabacteria group	807	Open in IMG/M
3300012356\|Ga0137371_10599460	Not Available	846	Open in IMG/M
3300012361\|Ga0137360_11449781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590	Open in IMG/M
3300012498\|Ga0157345_1018447	Not Available	689	Open in IMG/M
3300012988\|Ga0164306_10765679	Not Available	774	Open in IMG/M
3300013105\|Ga0157369_12190923	Not Available	560	Open in IMG/M
3300013297\|Ga0157378_11825651	Not Available	656	Open in IMG/M
3300013307\|Ga0157372_11652549	Not Available	737	Open in IMG/M
3300013308\|Ga0157375_12071003	Not Available	677	Open in IMG/M
3300015357\|Ga0134072_10130487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	806	Open in IMG/M
3300015374\|Ga0132255_101318072	Not Available	1089	Open in IMG/M
3300016341\|Ga0182035_12050370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura verrucosospora	520	Open in IMG/M
3300017821\|Ga0187812_1163414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	715	Open in IMG/M
3300017924\|Ga0187820_1149960	Not Available	701	Open in IMG/M
3300017928\|Ga0187806_1115330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	867	Open in IMG/M
3300017932\|Ga0187814_10193462	Not Available	764	Open in IMG/M
3300017932\|Ga0187814_10220431	Not Available	715	Open in IMG/M
3300017942\|Ga0187808_10234552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	819	Open in IMG/M
3300017943\|Ga0187819_10619398	Not Available	613	Open in IMG/M
3300017959\|Ga0187779_10966258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589	Open in IMG/M
3300017972\|Ga0187781_10451955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria → unclassified Kutzneria → Kutzneria sp. 744	920	Open in IMG/M
3300017973\|Ga0187780_10572725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	810	Open in IMG/M
3300017974\|Ga0187777_10625009	Not Available	760	Open in IMG/M
3300017975\|Ga0187782_11185692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597	Open in IMG/M
3300018001\|Ga0187815_10415278	Not Available	573	Open in IMG/M
3300018007\|Ga0187805_10503248	Not Available	568	Open in IMG/M
3300018042\|Ga0187871_10316769	Not Available	863	Open in IMG/M
3300018085\|Ga0187772_10442097	Not Available	910	Open in IMG/M
3300018468\|Ga0066662_11048010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	811	Open in IMG/M
3300020579\|Ga0210407_11368913	Not Available	526	Open in IMG/M
3300020581\|Ga0210399_10107168	All Organisms → cellular organisms → Bacteria	2289	Open in IMG/M
3300020582\|Ga0210395_10116748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1979	Open in IMG/M
3300021170\|Ga0210400_11445760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	547	Open in IMG/M
3300021181\|Ga0210388_11446711	Not Available	576	Open in IMG/M
3300021388\|Ga0213875_10369329	Not Available	682	Open in IMG/M
3300021403\|Ga0210397_10129182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1743	Open in IMG/M
3300021406\|Ga0210386_11655568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300021432\|Ga0210384_10555049	Not Available	1033	Open in IMG/M
3300021433\|Ga0210391_10357813	Not Available	1145	Open in IMG/M
3300021444\|Ga0213878_10187720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	867	Open in IMG/M
3300021474\|Ga0210390_10819926	Not Available	769	Open in IMG/M
3300021560\|Ga0126371_13624321	Not Available	521	Open in IMG/M
3300024225\|Ga0224572_1077978	Not Available	611	Open in IMG/M
3300025906\|Ga0207699_10893525	Not Available	655	Open in IMG/M
3300025915\|Ga0207693_11480379	Not Available	501	Open in IMG/M
3300025916\|Ga0207663_10837981	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300025916\|Ga0207663_10921402	Not Available	699	Open in IMG/M
3300025916\|Ga0207663_10947724	Not Available	689	Open in IMG/M
3300025916\|Ga0207663_11332635	Not Available	578	Open in IMG/M
3300025928\|Ga0207700_10378032	Not Available	1238	Open in IMG/M
3300025928\|Ga0207700_11996243	Not Available	507	Open in IMG/M
3300025944\|Ga0207661_10206957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1728	Open in IMG/M
3300027775\|Ga0209177_10262612	Not Available	643	Open in IMG/M
3300027855\|Ga0209693_10061307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1852	Open in IMG/M
3300027855\|Ga0209693_10479115	Not Available	597	Open in IMG/M
3300027882\|Ga0209590_10361064	All Organisms → cellular organisms → Bacteria → Terrabacteria group	936	Open in IMG/M
3300027884\|Ga0209275_10538537	Not Available	668	Open in IMG/M
3300028713\|Ga0307303_10173304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	526	Open in IMG/M
3300028720\|Ga0307317_10245163	Not Available	605	Open in IMG/M
3300028798\|Ga0302222_10358589	Not Available	569	Open in IMG/M
3300028808\|Ga0302228_10043235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces cellulosae	2195	Open in IMG/M
3300028879\|Ga0302229_10384556	Not Available	625	Open in IMG/M
3300028906\|Ga0308309_10460608	Not Available	1096	Open in IMG/M
3300029910\|Ga0311369_10569029	Not Available	951	Open in IMG/M
3300030494\|Ga0310037_10394404	Not Available	574	Open in IMG/M
3300030618\|Ga0311354_10071783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3943	Open in IMG/M
3300030677\|Ga0302317_10259126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	785	Open in IMG/M
3300030706\|Ga0310039_10039307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2141	Open in IMG/M
3300030906\|Ga0302314_10824516	Not Available	924	Open in IMG/M
3300031543\|Ga0318516_10373669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	822	Open in IMG/M
3300031543\|Ga0318516_10514840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	686	Open in IMG/M
3300031543\|Ga0318516_10722153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	565	Open in IMG/M
3300031549\|Ga0318571_10133650	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	843	Open in IMG/M
3300031572\|Ga0318515_10732838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	522	Open in IMG/M
3300031708\|Ga0310686_107268296	Not Available	837	Open in IMG/M
3300031713\|Ga0318496_10221231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia solanacearum	1042	Open in IMG/M
3300031719\|Ga0306917_11545026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	510	Open in IMG/M
3300031724\|Ga0318500_10408244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	676	Open in IMG/M
3300031748\|Ga0318492_10544247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	617	Open in IMG/M
3300031765\|Ga0318554_10333894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300031769\|Ga0318526_10332909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	621	Open in IMG/M
3300031777\|Ga0318543_10343053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	669	Open in IMG/M
3300031779\|Ga0318566_10192892	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1011	Open in IMG/M
3300031782\|Ga0318552_10636394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300031793\|Ga0318548_10184581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1022	Open in IMG/M
3300031799\|Ga0318565_10573512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300031821\|Ga0318567_10551662	Not Available	654	Open in IMG/M
3300031821\|Ga0318567_10806182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	532	Open in IMG/M
3300031832\|Ga0318499_10117186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia solanacearum	1035	Open in IMG/M
3300031896\|Ga0318551_10409967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	771	Open in IMG/M
3300031912\|Ga0306921_11689233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	685	Open in IMG/M
3300031942\|Ga0310916_10865503	Not Available	759	Open in IMG/M
3300031996\|Ga0308176_12079273	Not Available	607	Open in IMG/M
3300032039\|Ga0318559_10436123	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	611	Open in IMG/M
3300032041\|Ga0318549_10232347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	829	Open in IMG/M
3300032055\|Ga0318575_10626243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300032059\|Ga0318533_10846010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300032065\|Ga0318513_10455101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura verrucosospora	626	Open in IMG/M
3300032067\|Ga0318524_10374726	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	741	Open in IMG/M
3300032076\|Ga0306924_10109636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3130	Open in IMG/M
3300032160\|Ga0311301_11992726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	678	Open in IMG/M
3300032160\|Ga0311301_12279888	Not Available	617	Open in IMG/M
3300032205\|Ga0307472_100903331	Not Available	818	Open in IMG/M
3300032770\|Ga0335085_11333765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	755	Open in IMG/M
3300032892\|Ga0335081_11326301	All Organisms → cellular organisms → Bacteria → Terrabacteria group	810	Open in IMG/M
3300032893\|Ga0335069_10444477	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300032895\|Ga0335074_10162513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	2801	Open in IMG/M
3300032895\|Ga0335074_11317822	Not Available	594	Open in IMG/M
3300033004\|Ga0335084_10660498	Not Available	1067	Open in IMG/M
3300033134\|Ga0335073_11877338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300033158\|Ga0335077_10372536	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1542	Open in IMG/M
3300033158\|Ga0335077_11035518	Not Available	816	Open in IMG/M
3300033290\|Ga0318519_10906288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. CNU-125	545	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.50%
Host-Associated	Host-Associated	8.50%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.01%
Aquatic	Environmental → Aquatic	8.50%
Plants	Host-Associated → Plants	8.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.43%
Freshwater	Environmental → Aquatic → Freshwater	7.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.23%
Peat	Environmental → Terrestrial → Peat	4.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.61%
Sediment	Environmental → Aquatic → Sediment	1.31%
Roots	Host-Associated → Plants → Roots	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.67%
Loam	Environmental → Terrestrial → Soil → Loam	17.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.11%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.19%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	4.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.31%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.65%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.65%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.45%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.38%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.11%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	4.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.31%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.31%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.18%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.11%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.88%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.58%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.31%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.31%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.31%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.65%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.65%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.65%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.65%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.65%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.65%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.65%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.65%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012498	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410	Host-Associated	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024225	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU5	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028808	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_2	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030677	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_03397610	2170459005	Grass Soil	VLDAAVASQWRPDGAVEVLTDDYRLIRYPDWAHDSVFPVAQVTRSHSERAAAE
FD1_00415630	2170459024	Grass Soil	VLEAAAASQWCPDGAIEVLTDDYRLIRYPDWALDPAFPAAQVTW
Ga0062389_1032109082	3300004092	Bog Forest Soil	VSSWAPQRVLDAATAMEWQPDGAIEVRTNEYRLIRYPDWALDPTF
Ga0066679_106192661	3300005176	Soil	MSSWTAQRVLDAAAAMEFVPEGAIEVRTEDYRLLRHPDWVLGPSLGAAQVT
Ga0070709_101688063	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VLNAWTRHRVLDAVAGMEWHPDGAIEVLADDYRLIRYPDWALDPTFPAAQVTRSQSS
Ga0070714_1011540461	3300005435	Agricultural Soil	VLNAWTRHRVLDAAAGMEWHPDGAIEVLADDYRLIRYPDWALDPTFP
Ga0070714_1017521361	3300005435	Agricultural Soil	VSSWTPQHVLDAAVAMEWCPDGDTEVLTDDYRLIRYPDWALDPTFPAAQVTRS
Ga0070714_1018376571	3300005435	Agricultural Soil	VSSWTPRHVLEAAAASQWCPDGAIEVLTDDYRLIRYPDWALDPAFPAAQVTW
Ga0070714_1024887491	3300005435	Agricultural Soil	VLNAWTRRRVLDAAAGMEWHPDGAIEVLADDYRLIRYPDWALDPTFP
Ga0070713_1007275642	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VLNAWTRHRVLDAVAGMEWHPDGAIEVLADDYRLIRYPDWALDPTFPAAQVTR
Ga0070713_1011719522	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VLNAWTRHRVLDAAAGMEWHPDGAIEVLADDYRLIRYPDWALDPTFPAAQVTR
Ga0070713_1014188831	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VLNAWTRHRVLDAVAGMEWHPDGAIEVLADDYRLIRYPDWALDPTFPAAQVTRSQS
Ga0070711_1009606222	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSEWTPQRVLDAAAATEFVPEGAIEVRTNDYRLLRHPDWVLGPSLG
Ga0070678_1013966212	3300005456	Miscanthus Rhizosphere	VSSWTPRRVLEAAAARQWCPDGAVEVLTDDYRLIRYPDWALDPAFPAAQV
Ga0070698_1015000362	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VSSWTPRHVLDAAAARQWCPDGAVEVLTDDYRLIRYPDWALD
Ga0070741_100759555	3300005529	Surface Soil	VLNEWTRRRVLDAVAGMEWHPDGAIEVLADDYRLIRYPDWALDPTFPAAQVTRSHSG
Ga0070735_108577073	3300005534	Surface Soil	VSLWTTQRVLDAAAAMEWVPGGAIELRTEDYRLIRY
Ga0066707_110334822	3300005556	Soil	VSSWTPRRVLDAAVASEWRPDGAVEVLTDDYRLIRYPDWALDSAFPAAQVTRSHSERA
Ga0070664_1016797092	3300005564	Corn Rhizosphere	VLNAWTRHRVLDAVAGMEWHPDGAIEVLAEDYRLIRYPD
Ga0068860_1003459342	3300005843	Switchgrass Rhizosphere	VSSWTARHVLDAAAASQWCPDGAIEVLTDDYRLIRYPD
Ga0070717_105969122	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VSSWTPRRVLDAAVAMEWRPDGAVEVLTDDYRLIRYPDWALDSAFPAAQVTRSHSERAAAEVI
Ga0066696_108282751	3300006032	Soil	VSSWTPRHVLDAAAASQWCPDGAIEVLTDDYRLIRYPD
Ga0075028_1007661331	3300006050	Watersheds	MSSWTPQRVLDAAIAMEWRPDGAIEVLADDYRLIRYPDWALDPALPAAHVTR
Ga0075019_106118292	3300006086	Watersheds	LSSWTPKRVLDAAAAMEWCPDGATEVLADGYRLIR
Ga0070715_101566361	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VSSWTPRRVLEAAAASQWCPDGAIEVLTDDYRLIRYPDWALDPAFPAAQVT
Ga0070712_1016698601	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VLNAWTRHRVLDAAAGMEWHPDGAIEVLADDYRLIRYPDWALDPTFPAAQVTRSQSS
Ga0074059_121499802	3300006578	Soil	VSSWTPRHVLEAAAASQWCPDGAIEVLTDDYRLIRYPDWALDPAFPAAQVT
Ga0066660_115623292	3300006800	Soil	MSEWTPQRVLDAAAATEFLPEGGIEVRTNDYRLLRHPD
Ga0079221_114871631	3300006804	Agricultural Soil	VLNTWTRGRVLHAVAGMEWHPDGAIEVLADDYRLIRYPDWALDPTFPAAQ
Ga0075425_1012020362	3300006854	Populus Rhizosphere	VSSWTPRRVLEAAAASQWCPDGAIEVLTDDYRLIRYPDWALDPA
Ga0074063_141664692	3300006953	Soil	VSSWTPRHVLEAAAASQWCPDGAVEVLTDDYRLIRYPDWALDPAFPAA
Ga0066710_1022494501	3300009012	Grasslands Soil	VSSWTPRRVLDAAVASEWRPDGAVEVLTDDYRLIRYPDW
Ga0105245_108410971	3300009098	Miscanthus Rhizosphere	VLEAAAASQWCPDGAIEVLTDDYRLIRYPDWALDPAFP
Ga0066709_1010388411	3300009137	Grasslands Soil	VLDAVAASQWCPDGATEVLTDDYRLIRYPDWALDPTFPAAQ
Ga0116216_101337945	3300009698	Peatlands Soil	VLDAAIAMEWRPHGAIEVLADDYRLIRYPDWALDPVFPAAQVTRSRAGRT
Ga0116217_100385821	3300009700	Peatlands Soil	VLDAAIAMEWRPHGAIEVLADDYRLIRYPDWALDPVLPAAH
Ga0074044_109939702	3300010343	Bog Forest Soil	VLDAAIAMEWRPHGAIEVLADDYRLIRYPDWALDPVFPA
Ga0074044_110528002	3300010343	Bog Forest Soil	VLDAAIAMEWRPHGAIEVLADDYRLIRYPDWALDPVFPAAQVTRSRAGRTQ
Ga0126372_110749691	3300010360	Tropical Forest Soil	VLDAVVAMEWSPDGAIEVRTDDYRLIRYPDWALDPTFRAAQVTRSRTGRA
Ga0124844_11048533	3300010868	Tropical Forest Soil	LSSWTAQRVLDAAAAMEWRPEGAVEVLADDYRLIRY
Ga0126361_106450311	3300010876	Boreal Forest Soil	LSTWTPQRVLDAAIMMEWRPDGALDVQADDYRLIRY
Ga0137371_105994602	3300012356	Vadose Zone Soil	VLDAAAASQWCPDGAIEVLTDDYRLIRYPDWALDPAFPAAQVTRS
Ga0137360_114497811	3300012361	Vadose Zone Soil	MSSWTAQRVLDAAAAMEFVPEGAIEVRTGDYRLLRHPD
Ga0157345_10184471	3300012498	Arabidopsis Rhizosphere	VLEAAAASQWCPDGAVEVLTDDYRLIRYPDWALDPAFPAAQVTWSRSERTA
Ga0164306_107656791	3300012988	Soil	VLEAAAASQWCPDGAIEVLTDDYRLIRYPDWALDPAFPAAQVTWSRSERTAAEVIG
Ga0157369_121909232	3300013105	Corn Rhizosphere	VLDTAAASQWCPDGAVEVLTDDYRLIRYPDWALDSAFP
Ga0157378_118256511	3300013297	Miscanthus Rhizosphere	VLEAAAASQLFPDGAIEVLTDDYRLIRYPDWALDPAFPAAQVTWSRS
Ga0157372_116525492	3300013307	Corn Rhizosphere	VLEAAAARQWCPDGAIEVLTDDYRLIRYPDWALDPAFPAAQVTW
Ga0157375_120710032	3300013308	Miscanthus Rhizosphere	VLEAAAARQWCPDGAIEVLTDDYRLIRYPDWALDPAFPAAQVTWSRSE
Ga0134072_101304872	3300015357	Grasslands Soil	MSSWTAQRVLDAAAAMEWVPEGAIEMRTDDYRLVRYPDVVL
Ga0132255_1013180721	3300015374	Arabidopsis Rhizosphere	VLEAAAARQWCPDGAIEVLTDDYRLIRYPDWALDPAFPAAQVTWS
Ga0182035_120503701	3300016341	Soil	VSSWTPQRVLDAAAAMEWVPGGAIELRTDDYRLIRYPDVV
Ga0187812_11634141	3300017821	Freshwater Sediment	VSSWTPQRVLDAAAAMEWVPGGAIELRTDDYRLIRYPDVVLDPT
Ga0187820_11499602	3300017924	Freshwater Sediment	VSSWTPQRVLDAAAAMEWVPSGAIELRTDDYRLIRYPDV
Ga0187806_11153302	3300017928	Freshwater Sediment	VSSWTPQRVLDAAAAMEWVPGGAIELRTDDYRLIRYPDVVLDPTF
Ga0187814_101934622	3300017932	Freshwater Sediment	VSSWTPQQVLDAAAAMEWVPGGAIELRTDDYRLIRYPDVVLDPTFRA
Ga0187814_102204311	3300017932	Freshwater Sediment	MSSWTAQRVLDAAAGMEWVPEGSIEMRTDDYRLIRYPDVVL
Ga0187808_102345522	3300017942	Freshwater Sediment	VSSWTPQRVLDAAAAMEWVPGGAIELRTDDYRLIRYPDVVLDPTFRAA
Ga0187819_106193981	3300017943	Freshwater Sediment	VSSWTPQRVLDAAAAMEWVPSGAIELRTDDYRLIRYPDVVLDPTFRAA
Ga0187779_109662581	3300017959	Tropical Peatland	LSSWTPQRVLDAAAGMEWMPEGAIEMRNDDYRLVRYPDG
Ga0187781_104519551	3300017972	Tropical Peatland	HGPLDSQRVLDAAAAMEWVPSGAIELRTDDCRLIR
Ga0187780_105727252	3300017973	Tropical Peatland	MSSWTAQRVLDAAAAMEFVPEGAIEVRTDDYRLVR
Ga0187777_106250091	3300017974	Tropical Peatland	LGAWTPRRVLDAAVATEWWPDGAVEAPADDYRLIRYPDWAL
Ga0187782_111856922	3300017975	Tropical Peatland	LSTWTPQRVLDAAAGMEWVPEGAIEMRTEDYRRVRYPD
Ga0187815_104152783	3300018001	Freshwater Sediment	VSSWTPQQVLDAAAAMEWVPGGAIELRTDDYRLIRYPDVVLDPTFRAA
Ga0187805_105032482	3300018007	Freshwater Sediment	VSSWTPQRVLDAAAAMEWVPSGAIELRTDDYRLIRYPDVVLDP
Ga0187871_103167692	3300018042	Peatland	LSPWTPQRVLDAATVMEWQPEDAVEVRTDGYRLIRYPDWALDPSFPAAQV
Ga0187772_104420971	3300018085	Tropical Peatland	LGAWTPRRVLDAAVATEWWPDGAVEAPADDYRLIRYPDWALDP
Ga0066662_110480101	3300018468	Grasslands Soil	MSSWTAQRVLDAAAAMEFVREGAIECRTGDYRLRRHADWVLGPSLGA
Ga0210407_113689132	3300020579	Soil	VSLWTTQRVLDAAAAMEWVPGGAIELRTDDYRLIRYPD
Ga0210399_101071681	3300020581	Soil	VSSWTPRRVLDAAVASEWRPDGAVEVLTDDYRLIRYPDWALDSAFPAAQVTRSHSERAAA
Ga0210395_101167481	3300020582	Soil	LTSWTPRRVHDAAIAMEWRPDGAIEVLAEDYRLVRYPDWALDPVFPA
Ga0210400_114457601	3300021170	Soil	LSSWTPERVLDAAIAMEWCPEGAIEVLADGYRLIRYPGWALDPAFPAAQVTRSRTDRPAD
Ga0210388_114467112	3300021181	Soil	LSPWTPQRVLDAATAMEWQPDGAIEVRTGDYRLIRYPDWAL
Ga0213875_103693291	3300021388	Plant Roots	LSSLTQRRVLDAATAMEWRPDGAVEVLTGDYRLIRYPDWALDPSFSAAQVTRSRTGRPARDII
Ga0210397_101291824	3300021403	Soil	LSSWTPERVLDAATAMEWCPDGAIEVLADGYRLIRYPAWALDPAFPAAQVTRSRTGRPVDEV
Ga0210386_116555682	3300021406	Soil	LSSWTPERVLDAATAMEWCPDGAIEVLADGYRLIRYPAWALDPAFPAAQVTRSRTG
Ga0210384_105550491	3300021432	Soil	LTSWTPRRVHDAAIAMEWRPDGAIEVLAEDYRLVRYPDWALDPVFPAAQVIRSQLY
Ga0210391_103578131	3300021433	Soil	MSSWTPQRVHDAAIAMEWRPDGAIEVLAEDYRLVRYPDWALDPVFPAAQVIR
Ga0213878_101877201	3300021444	Bulk Soil	MSSWTPQRVLDAAAGMEWVPEGAVELRTDDYRLVRYPDVVL
Ga0210390_108199262	3300021474	Soil	LSSWTPQRVHDAAIAMEWRPDGAIEVLAEDYRLVRYPDWALD
Ga0126371_136243211	3300021560	Tropical Forest Soil	VSSWTPRRVLDAVVAMEWSPDGATEILTDDYRLVRYPDWALD
Ga0224572_10779781	3300024225	Rhizosphere	LSSWTPQRVHDAAIAMEWRPDGAIEVLAEDYRLVRYPDWALDPVFPAAQVIRSRVYG
Ga0207699_108935252	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VLNAWTRHRVLDAVAGMEWHPDGAIEVLADDYRLIRYPDW
Ga0207693_114803791	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VLNSGTPHSWTARRVLDATILMEWRPDGAIEVLTDDYRLIRYPDWALDPSFPAAQVTR
Ga0207663_108379811	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VSSWTPRRVLDAAVASEWRPDGAVEVLTDDYRLIRYPDWALDSAFPAA
Ga0207663_109214022	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VLNAWTRHRVLDAVAGMEWHPDGAIEVLADDYRLIRYP
Ga0207663_109477241	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VSSWTPRRVLEAAAASQWCPDGAIEVLTDDYRLIRY
Ga0207663_113326352	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VSSWTPRRVLDAAVDMEWRPDGAVEVLTDDYRLIRYPDWALDSAFPAAQVTRSRSERSAAEV
Ga0207700_103780321	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VLNAWTRHRVLDAVAGMEWHPDGAIEVLADDYRLIRYPD
Ga0207700_119962431	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VLNAWTRHRVLDAVAGMEWHPDGAIEVLGDDYRLIRYPDWALDPTFPAAQVTRSQSS
Ga0207661_102069573	3300025944	Corn Rhizosphere	VLNAWTRHRVLDAVAGMEWHPDGAIEVLADDYRLIRYPDWALDPTFPAA
Ga0209177_102626122	3300027775	Agricultural Soil	VSSWTPRRVLEAAAASQWCPDGAIEVLTDDYRLIRYPDWALDPAFPAAQ
Ga0209693_100613073	3300027855	Soil	VSLWTTQRVLDAAAAMEWVPGGAIELRTEDYRLIRYPD
Ga0209693_104791151	3300027855	Soil	MSSWTPQRVLDAAAGMEWVPGGAIELRTDDYRMIRYPDVVLDPSFRAA
Ga0209590_103610642	3300027882	Vadose Zone Soil	LSSWTQGRVLDAATAMEWRPDGAIEMLTGDYRLIRYPDWALDP
Ga0209275_105385371	3300027884	Soil	VSSWTPQRVLDAMAAMEWRPDGAIEVPADDYRLVRYPDWALDPIVPAAQ
Ga0307303_101733042	3300028713	Soil	VSSWTARHVLDAAAASQWCPDGAVEVLTDDYRLIRYPDWAL
Ga0307317_102451631	3300028720	Soil	VSSWTARHVLDAAAASQWCPDGAVEVLTDDYRLIRYPDWALDPAFPAAQVTRSR
Ga0302222_103585891	3300028798	Palsa	VLDAATVTEWTPDDAIEVRTDDYRLIRYPDWALDPSFPAAQVSRSHSGRPFGEL
Ga0302228_100432353	3300028808	Palsa	VLDAATVTEWTPDDAIEVRTDDYRLIRYPDWALDPSFPAAQVSRSHSGRPFGELVD
Ga0302229_103845562	3300028879	Palsa	LSAWTPQRVLEAAISLEWRPDGSLDVQTADYRLIRYPDWALDP
Ga0308309_104606082	3300028906	Soil	VSLWTTQRVLDAAAAMEWVPGGAIELRTEDYRLIRYPDVVLDPT
Ga0311369_105690292	3300029910	Palsa	LSAWTPRRVLDAAVSMEWRPAGAIDVQAADYRLIRYPDWALDPTFRAAQV
Ga0310037_103944042	3300030494	Peatlands Soil	LSSWTPRRVLDAAIAMEWRPHGAIEVLADDYRLIRYP
Ga0311354_100717831	3300030618	Palsa	LSPWTPQRVLDAATAMEWQPDGAIEVRTGDYRLIRYPDWALDP
Ga0302317_102591261	3300030677	Palsa	LSPWTPQRVLDAATVMEWQPDDAIEVRTDDYRLIRYP
Ga0310039_100393074	3300030706	Peatlands Soil	LSSWTPRRVLDAAIAMEWRPHGAIEVLTDDYRLIRYPDWALDPVLPAAQVTRSR
Ga0302314_108245161	3300030906	Palsa	VATDLRRQALSAWTPQRVLEAAISLEWRPDGSLDVQTADYRLIRYPDWALDPTF
Ga0318516_103736691	3300031543	Soil	VSSWTPERVLDAAAAMEWVPGGAIELRTDDYRLIRYPDVVLDPTL
Ga0318516_105148402	3300031543	Soil	VSSWTSQRVLDAAAAMEWVPSGAVELRTDDYRLIRYPDVVLDPTLR
Ga0318516_107221531	3300031543	Soil	VLDAAAAIEWVPGGAVELRTDDYRLIRYPDVVLDPTLRAAQVTW
Ga0318571_101336502	3300031549	Soil	VSSWTPRRVLDALVAVEWSPDGATEVLTDDYRLIRYPDW
Ga0318515_107328381	3300031572	Soil	VSSWTPQRVLDAAAAMEWVPSGAVELRTDDYRLIRYPDVVLDPTLRAAQVT
Ga0310686_1072682961	3300031708	Soil	VSLWTTQRVLDAAAAMEWVPGGAIELRTEDYRMIRYPDVVLDP
Ga0318496_102212312	3300031713	Soil	VSSWTPRRVLDALVAVEWSPDGATEVLTDDYRLIRYPDWALDPAFPAAQVTRSRTG
Ga0306917_115450261	3300031719	Soil	VSSWTPQRVLDAAAAMEWVPGGAIELRTDDYRLIRYPDV
Ga0318500_104082441	3300031724	Soil	VSSWTPQRVLDAAAAMEWVPGGAIELRTDDYRLIRYPDVVLDPTLRAAQV
Ga0318492_105442471	3300031748	Soil	VSSWTPQRVLDAAAAMEWVPSGAVELRTDDYRLIRYPDVV
Ga0318554_103338941	3300031765	Soil	VSSWTPERVLDAAAAMEWVPGGAIELRTDDYRLIRYPDVVLDPTLRAA
Ga0318526_103329092	3300031769	Soil	MSSWIAQRVLDAAAAMEFVPEGAIEVRTEDYRLVRHPD
Ga0318543_103430532	3300031777	Soil	VSSWTSQRVLDAAAAMEWVPSGAVELRTDDYRLIRYPDVVLDPTLRA
Ga0318566_101928923	3300031779	Soil	VSSWTAQRVLDAAAGMEWVPEGVIEMRTDAYRLVRYPDVVLDPTFRAGQA
Ga0318552_106363942	3300031782	Soil	LNSWTPQRVLDHAAAIEFVPEGGSEVRTDDYRLVRHPDWV
Ga0318548_101845811	3300031793	Soil	VSSWTPRRVLDSVVAMEWSPDGAIEVRTDDYRLIRYPD
Ga0318565_105735122	3300031799	Soil	MSSWTAQRVLDAAAATEFVPEGAIEVRTDDYRLVR
Ga0318567_105516621	3300031821	Soil	VSSWTPQRVLDAAAAMEWVPSGAVELRTDDYRLIRYPDVVLDPT
Ga0318567_108061821	3300031821	Soil	MEWAPGGAIELRTDDYRVIRYPDLVLDPTFRAAQVTWSRTTRPLDEII
Ga0318499_101171861	3300031832	Soil	VSSWTPRRVLDALVAVEWSPDGATEVLTDDYRLIRYPDWALDPAFPAAQV
Ga0318551_104099672	3300031896	Soil	VSSWTPQRVLDAAAAMEWVPGGAIELRTDDYRLIRYPD
Ga0306921_116892331	3300031912	Soil	VSSWTPERVLDAAAAMEWVPGGAIELRTDDYRLIR
Ga0310916_108655033	3300031942	Soil	VSSWTAQRVLDAAAGMEWVPEGVIEMRTDAYRLVRYPDVVLDPTF
Ga0308176_120792731	3300031996	Soil	VLNAWTRGRVLDAVAGMEWHPDGAIEVLADDYRLIR
Ga0318559_104361231	3300032039	Soil	VSLWTPQRVLDAVVALEWFPDGAVEVRTDDYRLIRYPD
Ga0318549_102323472	3300032041	Soil	VSSWTPQRVLDAAADIEWVPGGAIELRTDDYRLVRYPDVVLDPT
Ga0318575_106262432	3300032055	Soil	VSSWTPRRVLDALVAVEWSPDGATEVLTDDYRLIRYPDWALDPAFSAAQVTRSRTG
Ga0318533_108460102	3300032059	Soil	VSSWTPQRVLDAAAAMEWVPGGAIELRTDDYRLIRYPDVVLDPALRAAGYPLH
Ga0318513_104551012	3300032065	Soil	VSSWTPERVLDAAAAMEWVPGGAIELRTDDYRLIRYPDVVLDPT
Ga0318524_103747261	3300032067	Soil	VSSWTPRRVLDALVAVEWSPDGATEVLTDDYRLIRY
Ga0306924_101096361	3300032076	Soil	VSSWTPQRVLDAAAAMEWVPGGAIELRTDDYRLIR
Ga0311301_119927261	3300032160	Peatlands Soil	LSSWTPQRVLDAAIAMEWRPDGAIEVLTDDYRLIRYPDWALDAVFPAAQVTRSRAGRTRRPADE
Ga0311301_122798882	3300032160	Peatlands Soil	LSSWTPQRVLDAAIAMEWRPHGAIEVLADDYRLIRYPDWALD
Ga0307472_1009033312	3300032205	Hardwood Forest Soil	VSSWTPRRVLDAAVAMEWRPDGSLEVLADGYRLIR
Ga0335085_113337652	3300032770	Soil	VSSWTPRRVLDALVAVEWSPDGATEVLTDDYRLIRYPDWALDPAFPAAQITR
Ga0335081_113263011	3300032892	Soil	VSGAYSRVVSSWTPRRVLDAAIAMEWRPDGAVEAPSEDYRLI
Ga0335069_104444771	3300032893	Soil	VLNAWTRGRVLDAVAGMEWHPDGAIEVLADDYRLIRYPDWAL
Ga0335074_101625131	3300032895	Soil	VLDAAAGMEWVPGGAIELRTDDYKIIRYPDVVLDPTFSAAQVTWS
Ga0335074_113178221	3300032895	Soil	VSSWTPQRVLDAAAGMEWVPGGAIELRTDDYKIIRYPDVVLDPTFSAAQVTWS
Ga0335084_106604983	3300033004	Soil	VSSWTPRHVLDAAAASQWCPEGAVEVLTDDYRLIRY
Ga0335073_118773381	3300033134	Soil	VSSWTPQRVLDAAAAMEWVPAGSVELRTDDYRLIRYPDVVLDPTLR
Ga0335077_103725361	3300033158	Soil	LNSWTPGRVLDVANEMDWRPDGSIEAPAGDYRLIRYPDWAL
Ga0335077_110355183	3300033158	Soil	VLNAWTRHRVLDAVAGMEWHPDGAIEVLADDYRLIRYPDWALDPTFPA
Ga0318519_109062881	3300033290	Soil	VSSWTPQRVLDAAADIEWVSGAAIELRTDDYRLVRYPDVVLDP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045411

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences