Metagenome / Metatranscriptome Family F045387

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045387
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	46 residues
Representative Sequence	ANGSTTMTVTVSAGHGDVVQGWINLDGPGSNDLHFAYYATVGR
Number of Associated Samples	126
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.65 %
% of genes near scaffold ends (potentially truncated)	96.08 %
% of genes from short scaffolds (< 2000 bps)	91.50 %
Associated GOLD sequencing projects	120
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.693 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.608 % of family members)
Environment Ontology (ENVO)	Unclassified (34.641 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.941 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 19.72% Coil/Unstructured: 80.28%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF08885	GSCFA	8.50
PF00300	His_Phos_1	5.88
PF00072	Response_reg	4.58
PF01709	Transcrip_reg	2.61
PF06280	fn3_5	2.61
PF13414	TPR_11	1.31
PF07681	DoxX	1.31
PF00158	Sigma54_activat	1.31
PF02954	HTH_8	1.31
PF13273	DUF4064	0.65
PF13231	PMT_2	0.65
PF07497	Rho_RNA_bind	0.65
PF00480	ROK	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG0217	Transcriptional and/or translational regulatory protein YebC/TACO1	Translation, ribosomal structure and biogenesis [J]	2.61
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.31
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	1.31
COG4270	Uncharacterized membrane protein	Function unknown [S]	1.31
COG1158	Transcription termination factor Rho	Transcription [K]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.69 %
Unclassified	root	N/A	1.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.69 %
Unclassified	root	N/A	1.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.69 %
Unclassified	root	N/A	1.31 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	52.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.61 %
Unclassified	root	N/A	1.31 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.65 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	52.94 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.61 %
Unclassified	root	N/A	1.31 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.65 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	37.91 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	9.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.61 %
Unclassified	root	N/A	1.31 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.65 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	37.91 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	9.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.61 %
Unclassified	root	N/A	1.31 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	37.91 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	9.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.61 %
Unclassified	root	N/A	1.31 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	37.91 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	9.15 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.61 %
Unclassified	root	N/A	1.31 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	0.65 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	37.91 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.61 %
Unclassified	root	N/A	1.31 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	0.65 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908009\|FWIRA_GRAM18401ANQGS	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
2170459002\|FZY7DQ102FI0NI	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
2170459005\|F1BAP7Q02JVRQ2	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
2189573003\|GZIR7W402JYMIT	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0407509	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1053590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	570	Open in IMG/M
3300000890\|JGI11643J12802_10500586	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300000890\|JGI11643J12802_11978748	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300000890\|JGI11643J12802_12035366	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300000956\|JGI10216J12902_109724223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300000956\|JGI10216J12902_123028599	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300001139\|JGI10220J13317_11756033	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300005171\|Ga0066677_10075403	All Organisms → cellular organisms → Bacteria	1742	Open in IMG/M
3300005175\|Ga0066673_10094745	All Organisms → cellular organisms → Bacteria → Proteobacteria	1593	Open in IMG/M
3300005181\|Ga0066678_10560985	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300005186\|Ga0066676_10637601	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300005289\|Ga0065704_10423758	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300005295\|Ga0065707_10032905	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300005329\|Ga0070683_100691301	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300005354\|Ga0070675_100105728	All Organisms → cellular organisms → Bacteria	2375	Open in IMG/M
3300005364\|Ga0070673_100196505	All Organisms → cellular organisms → Bacteria	1735	Open in IMG/M
3300005445\|Ga0070708_100529502	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1112	Open in IMG/M
3300005447\|Ga0066689_10457141	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300005450\|Ga0066682_10083043	All Organisms → cellular organisms → Bacteria	1992	Open in IMG/M
3300005451\|Ga0066681_10928695	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	521	Open in IMG/M
3300005536\|Ga0070697_100241445	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300005536\|Ga0070697_100358464	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1260	Open in IMG/M
3300005548\|Ga0070665_101106482	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300005558\|Ga0066698_10580222	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300005561\|Ga0066699_10945504	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300005574\|Ga0066694_10394611	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	651	Open in IMG/M
3300005586\|Ga0066691_10490396	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300005764\|Ga0066903_100698620	All Organisms → cellular organisms → Bacteria → Proteobacteria	1787	Open in IMG/M
3300005764\|Ga0066903_105926755	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	641	Open in IMG/M
3300006046\|Ga0066652_101301757	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300006163\|Ga0070715_10823143	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	565	Open in IMG/M
3300006175\|Ga0070712_100485704	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300006796\|Ga0066665_10202502	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300006800\|Ga0066660_11369610	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300009012\|Ga0066710_103069317	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300009012\|Ga0066710_103269010	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	620	Open in IMG/M
3300009143\|Ga0099792_10098995	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300009802\|Ga0105073_1040173	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300010038\|Ga0126315_10289181	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300010043\|Ga0126380_11358239	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300010046\|Ga0126384_10099988	All Organisms → cellular organisms → Bacteria	2138	Open in IMG/M
3300010303\|Ga0134082_10401612	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300010304\|Ga0134088_10181246	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1007	Open in IMG/M
3300010323\|Ga0134086_10076263	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1163	Open in IMG/M
3300010326\|Ga0134065_10034523	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1497	Open in IMG/M
3300010326\|Ga0134065_10117159	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300010359\|Ga0126376_10120354	All Organisms → cellular organisms → Bacteria	2046	Open in IMG/M
3300010361\|Ga0126378_12269653	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	619	Open in IMG/M
3300010361\|Ga0126378_12312058	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300010376\|Ga0126381_101899975	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300010397\|Ga0134124_10220873	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1730	Open in IMG/M
3300010398\|Ga0126383_12791819	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	570	Open in IMG/M
3300011992\|Ga0120146_1078215	Not Available	531	Open in IMG/M
3300012198\|Ga0137364_10054008	All Organisms → cellular organisms → Bacteria	2686	Open in IMG/M
3300012198\|Ga0137364_10850605	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300012198\|Ga0137364_11442518	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300012199\|Ga0137383_10219087	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1395	Open in IMG/M
3300012200\|Ga0137382_10002738	All Organisms → cellular organisms → Bacteria → Proteobacteria	8140	Open in IMG/M
3300012202\|Ga0137363_10882704	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300012204\|Ga0137374_10541526	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	897	Open in IMG/M
3300012206\|Ga0137380_10175840	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1948	Open in IMG/M
3300012206\|Ga0137380_11203785	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	642	Open in IMG/M
3300012207\|Ga0137381_11238121	Not Available	639	Open in IMG/M
3300012211\|Ga0137377_11447863	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	614	Open in IMG/M
3300012285\|Ga0137370_10623579	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	668	Open in IMG/M
3300012285\|Ga0137370_10896229	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	549	Open in IMG/M
3300012351\|Ga0137386_10640337	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	765	Open in IMG/M
3300012353\|Ga0137367_10207922	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300012353\|Ga0137367_11216106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	503	Open in IMG/M
3300012354\|Ga0137366_10342583	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1095	Open in IMG/M
3300012355\|Ga0137369_10523945	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	834	Open in IMG/M
3300012356\|Ga0137371_10393428	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1075	Open in IMG/M
3300012357\|Ga0137384_10329634	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1267	Open in IMG/M
3300012357\|Ga0137384_10330766	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1264	Open in IMG/M
3300012361\|Ga0137360_10605983	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	938	Open in IMG/M
3300012361\|Ga0137360_11099246	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	687	Open in IMG/M
3300012582\|Ga0137358_10254220	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1195	Open in IMG/M
3300012901\|Ga0157288_10331165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	544	Open in IMG/M
3300012929\|Ga0137404_10139477	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	2005	Open in IMG/M
3300012930\|Ga0137407_11151935	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300012948\|Ga0126375_10355250	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300012955\|Ga0164298_10349687	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300012961\|Ga0164302_10855520	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300012975\|Ga0134110_10383231	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	621	Open in IMG/M
3300012976\|Ga0134076_10352988	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300012985\|Ga0164308_10391580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1134	Open in IMG/M
3300013296\|Ga0157374_10132840	All Organisms → cellular organisms → Bacteria	2410	Open in IMG/M
3300013296\|Ga0157374_11301490	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300014150\|Ga0134081_10047969	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1271	Open in IMG/M
3300014326\|Ga0157380_13124690	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300015264\|Ga0137403_10056622	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4019	Open in IMG/M
3300015356\|Ga0134073_10016267	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300015358\|Ga0134089_10293825	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	673	Open in IMG/M
3300015358\|Ga0134089_10371206	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	606	Open in IMG/M
3300015359\|Ga0134085_10319457	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	685	Open in IMG/M
3300015373\|Ga0132257_101861311	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300016341\|Ga0182035_10168808	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1701	Open in IMG/M
3300016371\|Ga0182034_12034861	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300017659\|Ga0134083_10396827	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300017997\|Ga0184610_1272568	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300018071\|Ga0184618_10341968	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	638	Open in IMG/M
3300018076\|Ga0184609_10214673	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300018433\|Ga0066667_11755540	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300018468\|Ga0066662_10837402	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300018468\|Ga0066662_11648747	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	670	Open in IMG/M
3300018468\|Ga0066662_11807411	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300019869\|Ga0193705_1042164	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300019869\|Ga0193705_1078205	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	642	Open in IMG/M
3300019886\|Ga0193727_1096190	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	879	Open in IMG/M
3300020006\|Ga0193735_1033420	All Organisms → cellular organisms → Bacteria	1567	Open in IMG/M
3300020008\|Ga0193757_1009085	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	947	Open in IMG/M
3300020015\|Ga0193734_1045697	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300021078\|Ga0210381_10100624	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	938	Open in IMG/M
3300022694\|Ga0222623_10275490	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300022756\|Ga0222622_10522180	All Organisms → cellular organisms → Bacteria	850	Open in IMG/M
3300022756\|Ga0222622_10801199	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	688	Open in IMG/M
3300022889\|Ga0247785_1029947	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300024288\|Ga0179589_10321370	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300025928\|Ga0207700_11494902	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300025930\|Ga0207701_10045134	All Organisms → cellular organisms → Bacteria	4080	Open in IMG/M
3300025930\|Ga0207701_10895328	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300025937\|Ga0207669_10820665	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300025986\|Ga0207658_11047973	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300026277\|Ga0209350_1007742	All Organisms → cellular organisms → Bacteria	3597	Open in IMG/M
3300026277\|Ga0209350_1090564	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300026308\|Ga0209265_1167282	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	574	Open in IMG/M
3300026309\|Ga0209055_1046019	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1905	Open in IMG/M
3300026316\|Ga0209155_1055147	All Organisms → cellular organisms → Bacteria → Proteobacteria	1534	Open in IMG/M
3300026316\|Ga0209155_1266814	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300026324\|Ga0209470_1229382	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300026324\|Ga0209470_1273628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	655	Open in IMG/M
3300026328\|Ga0209802_1021062	All Organisms → cellular organisms → Bacteria	3582	Open in IMG/M
3300026334\|Ga0209377_1036216	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	2313	Open in IMG/M
3300026537\|Ga0209157_1358124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300026538\|Ga0209056_10609846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300026540\|Ga0209376_1115431	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300026557\|Ga0179587_10017147	All Organisms → cellular organisms → Bacteria	3852	Open in IMG/M
3300028711\|Ga0307293_10078481	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300028876\|Ga0307286_10302133	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	592	Open in IMG/M
3300030847\|Ga0075405_11626553	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300031231\|Ga0170824_120090687	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300031231\|Ga0170824_124642843	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	536	Open in IMG/M
3300031231\|Ga0170824_125131363	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300031474\|Ga0170818_111410050	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	621	Open in IMG/M
3300031543\|Ga0318516_10866027	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	509	Open in IMG/M
3300031562\|Ga0310886_10381463	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300031897\|Ga0318520_10684408	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300032001\|Ga0306922_12203579	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.46%
Host-Associated	Host-Associated	6.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.89%
Plants	Host-Associated → Plants	6.54%
Aquatic	Environmental → Aquatic	4.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.23%
Sediment	Environmental → Aquatic → Sediment	3.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.31%
Freshwater	Environmental → Aquatic → Freshwater	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.74%
Loam	Environmental → Terrestrial → Soil → Loam	8.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.65%
Sand	Environmental → Terrestrial → Soil → Sand	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.44%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.58%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.27%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.31%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.65%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.30%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.27%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.31%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.65%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.65%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.65%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.65%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908009	Soil microbial communities from sample at FACE Site Metagenome WIR_Amb2	Environmental	Open in IMG/M
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2189573003	Grass soil microbial communities from Rothamsted Park, UK - FE2 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009802	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_50_60	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011992	Permafrost microbial communities from Nunavut, Canada - A23_65cm_12M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020008	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022889	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIRA_03463490	2124908009	Soil	VTVPANGSTTLTVSLSQGPTRHSIVQGWINLDGDDTNDLHFAYYGRVGSSK
E1_05416610	2170459002	Grass Soil	RGSVCQERERPANGSAVLTVTVNNGIPSGEVVQGWINLDGPGSNDLRFAYYAIVGH
E41_10778030	2170459005	Grass Soil	TLTVTVNAGQPLGTVVQGWIDLNSGSDDLHFGYYAQVGP
FE2_03441610	2189573003	Grass Soil	SVMVPANGSTTLTVTVSAPQGTTVQGWVNLAGEGENDLHFAYYAHVVP
ICChiseqgaiiDRAFT_04075091	3300000033	Soil	VPTNGSTTMTVTVNAGHGLGEVVQGWINLDGPGSNDLHFAYYAIVGH*
AP72_2010_repI_A100DRAFT_10535901	3300000837	Forest Soil	PASVTVPASGSTTMAVTVSAAQGSTAQGWVNLDGDGDNDLHFAYYAQVVPYGP*
JGI11643J12802_105005861	3300000890	Soil	ITVPASVTVPANSSTTLTVSVSASQGTTVQGWVNLDGDGANDLHFAYYAKVSP*
JGI11643J12802_119787482	3300000890	Soil	TVTVSAAIGSTVQGWVNLDGAGDNDLHFAYYAHVGP*
JGI11643J12802_120353662	3300000890	Soil	PANGSTTLTVTVTAPQGTTVQGWVDLDGEGDNDLHFAYYAHVAP*
JGI10216J12902_1097242232	3300000956	Soil	GDNRITVPGSINVPANGSTTMTVTVNAGLRDVVQGWINLDGPGSNDLHFAYYAIVGNP*
JGI10216J12902_1230285991	3300000956	Soil	ANGSTTLTVTVDAALGTTPQGWINLDGPGANDLHFAYYALVGP*
JGI10220J13317_117560331	3300001139	Soil	STTLTVTVSAAIGSTVQGWVNLDGEGDNDLHFAYYAHVGP*
Ga0066677_100754033	3300005171	Soil	TVPASVTVPANGSTTMTVTVSAGHGDVVQGWINLDGPGSNDLHFAYYATVGR*
Ga0066673_100947453	3300005175	Soil	ASVMVPADGSTTLTVTVAAGIGETVQGWINLDGPVDNDLHFAYYAHVVP*
Ga0066678_105609852	3300005181	Soil	TLSTPDDRITVPGSVTVPANGSTTMTVTVNSGQGDVVQGWINLDEHGSNDLHLAYYAIVGR*
Ga0066676_106376012	3300005186	Soil	GSVTVPANGSTTMTVTVNSGQGDVVQGWINLDEHGSNDLHLAYYAIVGR*
Ga0065704_104237582	3300005289	Switchgrass Rhizosphere	AGGSTTLTVTVSAAIGSTVQGWVNLDGEGDNDLHFAYYAHVGP*
Ga0065707_100329051	3300005295	Switchgrass Rhizosphere	TVPANVTVPAGGSTTLTVTVSAAIGSTVQGWVNLDGEGDNDLHFAYYAHVGP*
Ga0070683_1006913011	3300005329	Corn Rhizosphere	AEGSTTLRVTVNAGIGATVQGWINLDGPLDNDLHFAYYAHVGP*
Ga0070675_1001057284	3300005354	Miscanthus Rhizosphere	GDDRISVPASVTVPAEGSSTIRVTVNAGMGATVQGWINLDGPLDNDLHFAYYAHVGP*
Ga0070673_1001965051	3300005364	Switchgrass Rhizosphere	TTLRVTVNAGIGATVQGWINLDGPLDNDLHFAYYAHVGP*
Ga0070708_1005295022	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	TVAANSSATITVTVNPGLSPGAVLQGWINLDGPGSNDLHFAYYAAVGP*
Ga0066689_104571412	3300005447	Soil	LSSGDDRITVPGSVMVPANGSTTMTVTVNSSHGDVVQGWINLDGPGSNDLHFAYYAQVGR
Ga0066682_100830434	3300005450	Soil	TMTVTVNGGHGSGEVIQGWINLDGPGANDLHLAYYAVVGH*
Ga0066681_109286952	3300005451	Soil	PANGSTTMTVTVSAGLGDVVQGWINLDGPGANDLHLAYYAIVGR*
Ga0070697_1002414451	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	TRLTVPASVNVPANGSATLTVTVNAGLPHGALVQGWIDLNSGSDDLHFGYYAQVGP*
Ga0070697_1003584642	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VTVAANSSATITVTVNPGLSPGAVLQGWINLDGPGSNDLHFAYYAAVGP*
Ga0070665_1011064821	3300005548	Switchgrass Rhizosphere	SVTVPANGSTTLTVTVSAPQGATVQGWVNLDGGNNDLHFGYYAHVGP*
Ga0066698_105802222	3300005558	Soil	TVPANGSTTMTVTVNSSHGDVVQGWINLDGPGSNDLHFAYYAQVGP*
Ga0066699_109455042	3300005561	Soil	SVTVPANGSTTMTVTVSAGHGDVVQGWINLDGPGSNDLHFAYYATVGR*
Ga0066694_103946112	3300005574	Soil	TTLTVTVNTGQPSGTVVQGWINLDGPGSNDLHFAYYAIVGH*
Ga0066691_104903961	3300005586	Soil	ANGSTTMTVTVSSSHGDVVQGWVNLDGPGSDDLHFAYYATVGR*
Ga0066903_1006986203	3300005764	Tropical Forest Soil	STTLTVTVSAPQSTIVQGWVNLDGDGNNDLHLSYYAQVVP*
Ga0066903_1059267552	3300005764	Tropical Forest Soil	VPANGSTTLTVTVNAGQPLGTVIQGWIDLNSGSDDLHFAYYAQVGP*
Ga0066652_1013017572	3300006046	Soil	ANGSTTMTVTVSAGLGDVVQGWINLDGPGSNDLHLAYYAIVGR*
Ga0070715_108231431	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	PANGSATLSVSVNAGLASGTVVQGWINLDGGSSNVLHFAYYAQVGQ*
Ga0070712_1004857041	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ANGSATLSVSVNAGLASGTVVQGWINLDGPGSNDLHFAYYAQVGQ*
Ga0066665_102025021	3300006796	Soil	VPANGSTTMTVTVNGGHALGDVAQGWINLDGPGSNDLHLAYYAIVGH*
Ga0066660_113696101	3300006800	Soil	NGSTTMTVTVNAAHGDVVQGWINLDGPDTNDLHFAYYAIVGP*
Ga0066710_1030693171	3300009012	Grasslands Soil	TLSSGDDRITVPGSVTVPANGSTTMTVTVNSSHRDVVQGWINLDGPDSNDLHFAYYATVGNP
Ga0066710_1032690101	3300009012	Grasslands Soil	SVTVPANGSTTMTVTVSSGHGDVVQGWINLDGPGSNDLHLAYYATVGQ
Ga0099792_100989951	3300009143	Vadose Zone Soil	GSTTLTVTVSAPQGTTVQGWVNLDGDGENDLHFAYDAQVVP*
Ga0105073_10401732	3300009802	Groundwater Sand	GSVTVPANSSTTLTVTVSATLGDTVQGWINLDGDGDNDLHFAYYAHVGP*
Ga0126315_102891811	3300010038	Serpentine Soil	PSVTVPANGSTTMTVTVSSSHGDVVQGWINLDGAGSNDLHFAYYAQVGK*
Ga0126380_113582392	3300010043	Tropical Forest Soil	VTVNSSHGDVVQGWINLDGAGSNDLHFAYYAQVGK*
Ga0126384_100999881	3300010046	Tropical Forest Soil	RITVPASVTVPANGSTTLTVTVSAPQGTTVQGWINLDGPMHNDLHFAYYAHVVP*
Ga0134082_104016122	3300010303	Grasslands Soil	TTLTVTVNAGQPLGTAVQGWIDLNSGSDDLHFGYYAQVGP*
Ga0134088_101812462	3300010304	Grasslands Soil	TINPGSTGIVQGWINLNGPGSNDLHFAYYAHVGP*
Ga0134086_100762631	3300010323	Grasslands Soil	ANGSTTMTVTVNSSNGDVVEGWINLDGPGSNDLHFAYYAQVGR*
Ga0134065_100345231	3300010326	Grasslands Soil	VPSSVTVPANGSATLSVTVNAGHGDVVQGWINLDGPGSNDLHFAYYATVGKP*
Ga0134065_101171592	3300010326	Grasslands Soil	MVPANGSTTMTVTVNSSHGDVVQGWINLDGPGSNDLHFAYYAQVGR*
Ga0126376_101203544	3300010359	Tropical Forest Soil	SVTVPANGSTTITVTVTTGRGEVVQGWINLDGGSNDLHFAYYAIVN*
Ga0126378_122696532	3300010361	Tropical Forest Soil	LSSPDERITVPGSVTVPANGSTTMIVTVNSSHGDVVQGWINLDGAGSNDLHFAYYAAVGK
Ga0126378_123120581	3300010361	Tropical Forest Soil	GSATLTVSVNAGLPAGTVVQGWINLDGGGSNDLHFAYYAQVGP*
Ga0126381_1018999751	3300010376	Tropical Forest Soil	TTLTVTVSAPQGTTVQGWVNLDGPGDNDLHFAYYAHVVP*
Ga0134124_102208731	3300010397	Terrestrial Soil	TLTVTVSAPQGTTVQGWVNLDGGNNDLHFGYYAHVGP*
Ga0126383_127918191	3300010398	Tropical Forest Soil	MVPANGSTTMTVTVSSSHGDVVQGWINLDGPGSNDLHFAYYAQVGK*
Ga0120146_10782151	3300011992	Permafrost	VPANGSTTITVWVNSGAAGSVVQGWIQLANGSNTYHFAYWAFRG*
Ga0137364_100540084	3300012198	Vadose Zone Soil	STTMTVTVNSSHGDVVQGWINLDGPGSNDLHFAYYATVGR*
Ga0137364_108506052	3300012198	Vadose Zone Soil	PTMTVTVSAAQGSTAQGWVNLDGDGSNDLHFAYYAHVVP*
Ga0137364_114425181	3300012198	Vadose Zone Soil	TVPANGSTTMTVTVSAGHRDVVQGWINLDGPLSNDLHFAYYAQVGK*
Ga0137383_102190871	3300012199	Vadose Zone Soil	GSTTMTVTVNSSHGDVVQGWINLDGPGSNDLHFAYYAQVGR*
Ga0137382_100027381	3300012200	Vadose Zone Soil	SVMVPANGSTTLTVTVSAAQGTTVQGWVNLDGELENDLHFAYYAHVGP*
Ga0137363_108827041	3300012202	Vadose Zone Soil	VTVPANGSTTMTVTVNGGHALGEVAQGWINLDGPGSNDLHLAYYAIVGH*
Ga0137374_105415261	3300012204	Vadose Zone Soil	TVTVNAALGATVQGWINLDGDGDNDLHFAYYAKVGP*
Ga0137380_101758401	3300012206	Vadose Zone Soil	TITVTVNAGLALGTVVQGWIGLDGLGSNDLHFAYYAVVRP*
Ga0137380_112037851	3300012206	Vadose Zone Soil	PANGSTTLTVTVNAALGTTVQGWINLDGPGSNDLHFAYYAIVGQ*
Ga0137381_112381211	3300012207	Vadose Zone Soil	PGLSPGAVVQGWINLAGTGGNNNLHLAYYAVVGP*
Ga0137377_114478631	3300012211	Vadose Zone Soil	NGSTTLTVTVSAGHGEVVQGWINLDGPGSNDLHFAYYAVVGH*
Ga0137370_106235792	3300012285	Vadose Zone Soil	DVAVSAPMGTTVQGWINLDGGGDNDLHFAYYAIVGR*
Ga0137370_108962291	3300012285	Vadose Zone Soil	VMVPANGSTTMTVTVNSSHGDVVQGWINLDGPGSNDLHFAYYAQVGR*
Ga0137386_106403372	3300012351	Vadose Zone Soil	VPSSVAVPANGSATITVTVNAGLALGTVVQGWIGLDGLGSNDLHFAYYAVGP*
Ga0137367_102079221	3300012353	Vadose Zone Soil	STTLTVTVNAALGATVQGWINLDGDGDNDLHFAYYAKVGP*
Ga0137367_112161062	3300012353	Vadose Zone Soil	PAGVTVPASGSTTLTIQVNAGQAIGGVIQGWIDLDGGASGSYHFAYYAVVGR*
Ga0137366_103425831	3300012354	Vadose Zone Soil	ANGSTTMTVTVSAAMGTTAQGWLNLDGDGANDLHFAYYAAVSP*
Ga0137369_105239452	3300012355	Vadose Zone Soil	TVTVNAGLGTTAQGWINLDGPGSNDLHFAYLAIVGR*
Ga0137371_103934281	3300012356	Vadose Zone Soil	SVTVPANGSTTMIVTVNAGLGEVVQGWINLDGPDTNDLHFAYYAIVGP*
Ga0137384_103296343	3300012357	Vadose Zone Soil	VPGSVMVPANGSTTMTVTVNSSHGDVVQGWINLDGPGSNDLHFAYYAQVGR*
Ga0137384_103307663	3300012357	Vadose Zone Soil	GDDRITVPGSVMVPANGSTTMTVTVNSSHGDVVQGWINLDGPGSNDLHFAYYAQVGR*
Ga0137360_106059831	3300012361	Vadose Zone Soil	GSTTMTVTVSSSHGDLVQGWINLDGPGSNDLHFAYYATVGL*
Ga0137360_110992462	3300012361	Vadose Zone Soil	IVPNSVTVPANGSTTMTVTVNSIHGDVVQGWINLDGPSSNDLHFAYYAVVGK*
Ga0137358_102542201	3300012582	Vadose Zone Soil	VTVPANGSTTLTVAVSSAHGDVVQGWVNLDGPGSNDLHFAYYATVGR*
Ga0157288_103311651	3300012901	Soil	NGSTTLTVTVNTGQPSGTVVQGWIKLDGPGSNDLHFAYYAIVGH*
Ga0137404_101394773	3300012929	Vadose Zone Soil	VPASVMVPADGSTTLTVTVAAGIGETVQGWINLDGPVDNDLHFAYYAHVVP*
Ga0137407_111519352	3300012930	Vadose Zone Soil	SVMVPADGSTTLTVTVATGIGETVQGWINLDGPVDNDLHFAYYAHVVP*
Ga0126375_103552501	3300012948	Tropical Forest Soil	NGSTTLRVTVSAPQGSTVQGWVNLDGDGNNDLHFAYYAQVVP*
Ga0164298_103496871	3300012955	Soil	NTGQPSGTVVQGWINLDGAGSNDLHFAYYAIVGH*
Ga0164302_108555202	3300012961	Soil	STTLRVTVNAGIGATVQGWINLDGPLDNDLHFAYYAHVGP*
Ga0134110_103832311	3300012975	Grasslands Soil	PNSVTVPASGSTTMTVTVNSSHGDVVQGWINLDGPGSNDLHFAYYAVVGK*
Ga0134076_103529881	3300012976	Grasslands Soil	DGSTTLTVTVAAGIGETVQGWINLDGPADNDLHFAYYAHIGP*
Ga0164308_103915803	3300012985	Soil	AVSVNAALPAGTVVQGWVNLDGSGTNDLHFAYYAQVGP*
Ga0157374_101328404	3300013296	Miscanthus Rhizosphere	VPANGSTTLTVTVSAPQGTTVQGWVNLDGGNNDLHFGYYAHVGP*
Ga0157374_113014902	3300013296	Miscanthus Rhizosphere	ANGSTTLTVTVSAPQGTTVQGWVNLDGGNNDLHFGYYAHVGP*
Ga0134081_100479691	3300014150	Grasslands Soil	VTINPGSTGIVQGWINLNGPGSNDLHFAYYAHVGP*
Ga0157380_131246902	3300014326	Switchgrass Rhizosphere	ASVTVPANGSTTLTVTVSAPQGTTLQGWVNLDGGNNDLHFGYYAHVGP*
Ga0137403_100566221	3300015264	Vadose Zone Soil	TTMTVTVNSSHGDVVQGWINLDGPGSNDLHFAYYAQVGR*
Ga0134073_100162671	3300015356	Grasslands Soil	PANGSTTMTVTVSAAHGDVAQGWINLDGPGSNDLHFAYYAIVGR*
Ga0134089_102938252	3300015358	Grasslands Soil	ITVPSSVTVPANGSATLSVTVNAGHGDVVQGWINLDGPGSNDLHFAYYATVGKP*
Ga0134089_103712061	3300015358	Grasslands Soil	TVTVAAGIGETVQGWINLDGPVDNDLHFAYYAHVGP*
Ga0134085_103194571	3300015359	Grasslands Soil	TVPANGSTTLTVTVSAAMGTTAQGWINLDGDGANDLHFAYYAAVSP*
Ga0132257_1018613111	3300015373	Arabidopsis Rhizosphere	ITVPASVTAPANASTTLTVTVNGRLALGETVQGWINLDGPGSNDVHFGYYAVVSP*
Ga0182035_101688081	3300016341	Soil	SVMVPANGSATLTVSVNAGLAAGTVVQGWINLNGGGSNVLHFAYYAQVGQ
Ga0182034_120348611	3300016371	Soil	TTLTVTVNAGLPHGTVVQGWIDLNSGSDDLHLAYYAQVGP
Ga0134083_103968271	3300017659	Grasslands Soil	VMVPADGSTTLTVTVAAGIGETVQGWINLDGPVDNDLHFAYYAIVGP
Ga0184610_12725681	3300017997	Groundwater Sediment	PDSVTVPANGSTTLTVTVNTGHSLDTVQGWINLDGPGSNDLHFAYYAVVGH
Ga0184618_103419682	3300018071	Groundwater Sediment	TVNTGHSLDTVQGWINLDGPGSNDLHFAYYAVVGH
Ga0184609_102146731	3300018076	Groundwater Sediment	TVTVSAPQGTTVQGWVNLDGEGENDLHFAYYAHVVP
Ga0066667_117555401	3300018433	Grasslands Soil	DVAVSAPMGTTVQGWINLDGEGDNDLHFAYYAIVGR
Ga0066662_108374023	3300018468	Grasslands Soil	STTMTVTVNSGHGDVVQGWINLDGDGGNDLHLAYYAIVGR
Ga0066662_116487471	3300018468	Grasslands Soil	TVPGSVTVPANGSTTLTVTVNSGHSLDTVQGWINLDGPGSNDLHFAYYAVVGH
Ga0066662_118074112	3300018468	Grasslands Soil	PGSVMVPANGSTTMTVTVNSSHGDVVQGWINLDGPGSNDLHFAYYAQVGR
Ga0193705_10421641	3300019869	Soil	PGSVNVPANGSAVLTVTVNNGIPSGEVVQGWINLDGPGSNDLRFAYYAIVGH
Ga0193705_10782052	3300019869	Soil	ANGSTTLTVTVNAGHALDTVQGWINLDGPGSNDLHFAYYAVVGH
Ga0193727_10961903	3300019886	Soil	TTMTVTVNSSHGDVAQGWINLDGAGSNDLHFAYYAQVGR
Ga0193735_10334201	3300020006	Soil	GSTTLTVTVSAPQGTTVQGWVNLDGDGENDLHFAYYAQVVP
Ga0193757_10090851	3300020008	Soil	VTVPANSSTTMTVTVSSGHGDVVQGWIDLDGPGSNDLHFAYYAVVGK
Ga0193734_10456972	3300020015	Soil	ASVTVPANGSTTLTVSVSAPQGTTVQGWVNLDGDGSNDLHFAYYAHVVP
Ga0210381_101006241	3300021078	Groundwater Sediment	SVPASVTVPANGSTTLTVTVNAGHALDTVQGWINLDGPGSNDLHFAYYAVVGH
Ga0222623_102754901	3300022694	Groundwater Sediment	TVNAGHALDTVQGWINLDGPGSNDLHFAYYAVVGH
Ga0222622_105221801	3300022756	Groundwater Sediment	GSVTVPANGSTTLSVAVSAPMGTTVQGWVNLDGDGDNDLHFAYFAIVGR
Ga0222622_108011991	3300022756	Groundwater Sediment	MVPANSSTTLTVTVSAPQGSNVQGWVNLDGEAENDLHFAYYAQVVP
Ga0247785_10299471	3300022889	Soil	EGSTTLRVTVNAGIGATVQGWINLDGPLDNDLHFAYYAHVGP
Ga0179589_103213701	3300024288	Vadose Zone Soil	VPVSAAQGTTVQGWVNLDGELENDLHFAYYAQVVP
Ga0207700_114949022	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	TLTVTVNAGLPHGALVQGWIDLNSGSDDLHFGYYAQVGP
Ga0207701_100451341	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	LRVTVNAGMGATVQGWINLDGPLDNDLHFAYYAHVGP
Ga0207701_108953281	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	ANASTTLTVTVSAPQGSTVQGWVNLDGDGSNDLHFAYYAHVVP
Ga0207669_108206652	3300025937	Miscanthus Rhizosphere	DRVSVPASVTVPAEGSTTLRVTVNAGIGATVQGWINLDGPLDNDLHFAYYAHVGP
Ga0207658_110479732	3300025986	Switchgrass Rhizosphere	ASVNVPANGSTTLTVTVNTGQPSGTVVQGWINLDGPGSNDLHFAYYAIVGH
Ga0209350_10077425	3300026277	Grasslands Soil	TVTVNGGHGSGEVIQGWINLDGPGSNDLHLAYYAIVGH
Ga0209350_10905641	3300026277	Grasslands Soil	ANGSTTMTVTVSAGHGDVVQGWINLDGPGSNDLHFAYYATVGR
Ga0209265_11672822	3300026308	Soil	STTLTVTVAAGIGETVQGWINLDGPVDNDLHFAYYAHVVP
Ga0209055_10460191	3300026309	Soil	TLPDSVTVPANGSTTLTVTVNAGHSLDTVQGWINLDGPGSNDLHFAYYAVVGH
Ga0209155_10551471	3300026316	Soil	ASVMVPADGSTTLTVTVAAGIGETVQGWINLDGPVDNDLHFAYYAHVVP
Ga0209155_12668141	3300026316	Soil	ITVPGSVTVPANGSTTMTVTVNSSHGDVVQGWINLDGAGSNDLHFAYYAQVGK
Ga0209470_12293821	3300026324	Soil	TVTVNAGQPLGTAVQGWIDLNSGSDDLHFGYYAQVGP
Ga0209470_12736281	3300026324	Soil	VPANGSTTMTVTVNSGQGDVVQGWINLDEHGSNDLHLAYYAIVGR
Ga0209802_10210621	3300026328	Soil	SVTVPGNGSTTMTVTVNAAHGDVVQGWINLDGPDTNDLHFAYYAIVGP
Ga0209377_10362161	3300026334	Soil	ILSAGDTRIIVPNSVTVPANGSTTMTVTVNSIHGDVVQGWINLDGPSSNDLHFAYYAVVG
Ga0209157_13581241	3300026537	Soil	VTVNTGQPSGTVVQGWINLDGPGSNDLHFAYYAIVGH
Ga0209056_106098461	3300026538	Soil	SVTVPANGSTTMTVTVNPSHGDVVQGWINLDGPGTNDLHFAYYAQVGK
Ga0209376_11154313	3300026540	Soil	ANGSTTLTVTVNAGQPLGTAVQGWIDLNSGSDDLHFGYYAQVGP
Ga0179587_100171471	3300026557	Vadose Zone Soil	NGSTTLTVAVSSAHGDVVQGWVNLDGPGSNDLHFAYYATVGR
Ga0307293_100784811	3300028711	Soil	AVLTVTVNNGIPSGEVVQGWINLDGPGSNDLRFAYYAIVGH
Ga0307286_103021331	3300028876	Soil	NGSAVLTVTVNNGIPSGEVVQGWINLDGPGSNDLRFAYYAIVGH
Ga0075405_116265531	3300030847	Soil	AGDARISVPGSVNVPANGSAVLTVTVNNGIPSGEVVQGWINLDGPGSNDLHFAYYAIVGH
Ga0170824_1200906871	3300031231	Forest Soil	PSSVMVPANGSATLSVSVNAGLAAGTVVQGWINLDGGGSNDLHFAYYAQVVP
Ga0170824_1246428432	3300031231	Forest Soil	LTVTVNAGQPLGTVVQGWIDLNSGSDDLHFGYYAQVGP
Ga0170824_1251313632	3300031231	Forest Soil	ITVPASVNVPANGSTTLTVTVNTGQPSGTVVQGWINLDGPGSDLHFAYYAIVGH
Ga0170818_1114100501	3300031474	Forest Soil	ANGSTTMTVTVSSSHGDVVQGWVNLDGPGSDDLHFAYYATVGR
Ga0318516_108660271	3300031543	Soil	ANGSTTLTVTVNAGSPLGTVVQGWIDLNSGSDDLHFAYYAQVGP
Ga0310886_103814631	3300031562	Soil	TVPASVTVPANGSTTLTVTVSAPQGTTVQGWVNLDGGNNDLHFGYYAHVGP
Ga0318520_106844082	3300031897	Soil	NRITVPSSVMVPANGSATLTVSVNAGLAAGTVVQGWINLNGGGSNVLHFAYYAQVGQ
Ga0306922_122035792	3300032001	Soil	GVLSSGDTRITVPASVNVPANGSTTLTVTVNAGQPLGTVVQGWIDLNSGSDDLHFGYYAQVGP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045387

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences