Metagenome / Metatranscriptome Family F045307

Basic Information
Family ID	F045307
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	40 residues
Representative Sequence	DTLNQVWPEQKKLEPLWFWNNYDVPKAGEPLSYGKTVQP
Number of Associated Samples	137
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.31 %
% of genes near scaffold ends (potentially truncated)	97.39 %
% of genes from short scaffolds (< 2000 bps)	88.89 %
Associated GOLD sequencing projects	127
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.16

Most Common Taxonomy
Group	Bacteria (94.771 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.183 % of family members)
Environment Ontology (ENVO)	Unclassified (26.797 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.288 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.48% β-sheet: 0.00% Coil/Unstructured: 95.52%
Feature Viewer

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Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF01370	Epimerase	45.75
PF16363	GDP_Man_Dehyd	16.34
PF11306	DUF3108	7.19
PF13950	Obsolete Pfam Family	3.27
PF01904	DUF72	1.31
PF12704	MacB_PCD	1.31
PF01925	TauE	0.65
PF00704	Glyco_hydro_18	0.65
PF00696	AA_kinase	0.65
PF01979	Amidohydro_1	0.65
PF13533	Biotin_lipoyl_2	0.65
PF07676	PD40	0.65
PF13683	rve_3	0.65
PF13646	HEAT_2	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	1.31
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.77 %
Unclassified	root	N/A	5.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.77 %
Unclassified	root	N/A	5.23 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.77 %
Unclassified	root	N/A	5.23 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	45.75 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	25.49 %
Unclassified	root	N/A	5.23 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	33.33 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	25.49 %
Unclassified	root	N/A	5.23 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.58 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.31 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.33 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	25.49 %
Unclassified	root	N/A	5.23 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.65 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.33 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	25.49 %
Unclassified	root	N/A	5.23 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.65 %
Isosphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales	0.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.33 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	25.49 %
Unclassified	root	N/A	5.23 %
Isosphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae	0.65 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.33 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	25.49 %
Unclassified	root	N/A	5.23 %
Paludisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera	0.65 %
Terriglobus albidus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	0.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	33.33 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	25.49 %
Unclassified	root	N/A	5.23 %
Paludisphaera borealis	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	0.65 %
Terriglobus albidus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	0.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100443089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1176	Open in IMG/M
3300002917\|JGI25616J43925_10091807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1261	Open in IMG/M
3300003505\|JGIcombinedJ51221_10468925	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	508	Open in IMG/M
3300004092\|Ga0062389_104301435	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	536	Open in IMG/M
3300004631\|Ga0058899_10867137	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	504	Open in IMG/M
3300005177\|Ga0066690_10106868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1804	Open in IMG/M
3300005186\|Ga0066676_10349797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300005332\|Ga0066388_105229938	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	658	Open in IMG/M
3300005434\|Ga0070709_10365920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1069	Open in IMG/M
3300005445\|Ga0070708_100920892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300005447\|Ga0066689_10069536	All Organisms → cellular organisms → Bacteria	1947	Open in IMG/M
3300005467\|Ga0070706_101456575	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	626	Open in IMG/M
3300005518\|Ga0070699_101782102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300005542\|Ga0070732_10307843	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300005555\|Ga0066692_10348795	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300005557\|Ga0066704_10067870	All Organisms → cellular organisms → Bacteria → Acidobacteria	2289	Open in IMG/M
3300005560\|Ga0066670_10322013	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	941	Open in IMG/M
3300005586\|Ga0066691_10280670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	981	Open in IMG/M
3300005610\|Ga0070763_10537976	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300005844\|Ga0068862_101919956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300006041\|Ga0075023_100526222	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	537	Open in IMG/M
3300006046\|Ga0066652_101392557	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	657	Open in IMG/M
3300006059\|Ga0075017_101163996	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	603	Open in IMG/M
3300006102\|Ga0075015_100695562	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	603	Open in IMG/M
3300006162\|Ga0075030_100365606	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300006173\|Ga0070716_100724435	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	762	Open in IMG/M
3300006175\|Ga0070712_101402350	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	610	Open in IMG/M
3300006176\|Ga0070765_100849709	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	863	Open in IMG/M
3300006176\|Ga0070765_101574964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300006354\|Ga0075021_11168449	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	505	Open in IMG/M
3300006794\|Ga0066658_10924658	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	504	Open in IMG/M
3300006797\|Ga0066659_10863482	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	754	Open in IMG/M
3300006804\|Ga0079221_10789952	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300006854\|Ga0075425_101910960	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	665	Open in IMG/M
3300007255\|Ga0099791_10165453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1037	Open in IMG/M
3300007258\|Ga0099793_10041536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1997	Open in IMG/M
3300007265\|Ga0099794_10391433	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300007265\|Ga0099794_10743990	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	523	Open in IMG/M
3300009038\|Ga0099829_10316914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1280	Open in IMG/M
3300009088\|Ga0099830_10273906	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1341	Open in IMG/M
3300009162\|Ga0075423_10677094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1088	Open in IMG/M
3300009792\|Ga0126374_10307842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1066	Open in IMG/M
3300010043\|Ga0126380_11374160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300010046\|Ga0126384_10081044	All Organisms → cellular organisms → Bacteria → Acidobacteria	2339	Open in IMG/M
3300010325\|Ga0134064_10134229	Not Available	843	Open in IMG/M
3300010325\|Ga0134064_10338928	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	584	Open in IMG/M
3300010326\|Ga0134065_10498992	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	507	Open in IMG/M
3300010358\|Ga0126370_11334780	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300010359\|Ga0126376_12560589	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300010361\|Ga0126378_10718256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1111	Open in IMG/M
3300010361\|Ga0126378_12225446	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	626	Open in IMG/M
3300010361\|Ga0126378_12570218	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	582	Open in IMG/M
3300010362\|Ga0126377_11511214	Not Available	745	Open in IMG/M
3300010379\|Ga0136449_104330350	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	524	Open in IMG/M
3300011120\|Ga0150983_13605025	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	532	Open in IMG/M
3300011120\|Ga0150983_14284306	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	568	Open in IMG/M
3300011270\|Ga0137391_10451565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1093	Open in IMG/M
3300011270\|Ga0137391_11006607	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	678	Open in IMG/M
3300011271\|Ga0137393_10812366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300012189\|Ga0137388_10170546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1943	Open in IMG/M
3300012189\|Ga0137388_10280108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1525	Open in IMG/M
3300012189\|Ga0137388_11122854	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300012199\|Ga0137383_10019978	All Organisms → cellular organisms → Bacteria	4622	Open in IMG/M
3300012200\|Ga0137382_10797992	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300012202\|Ga0137363_11469492	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	572	Open in IMG/M
3300012202\|Ga0137363_11831227	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	500	Open in IMG/M
3300012203\|Ga0137399_10768722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300012203\|Ga0137399_11207743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300012210\|Ga0137378_11661255	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	546	Open in IMG/M
3300012211\|Ga0137377_10116541	All Organisms → cellular organisms → Bacteria → Acidobacteria	2543	Open in IMG/M
3300012285\|Ga0137370_10134479	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300012351\|Ga0137386_10062982	All Organisms → cellular organisms → Bacteria → Acidobacteria	2579	Open in IMG/M
3300012361\|Ga0137360_10327248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1278	Open in IMG/M
3300012362\|Ga0137361_10733517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300012683\|Ga0137398_10796214	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300012683\|Ga0137398_11116016	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	542	Open in IMG/M
3300012918\|Ga0137396_10414023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M
3300012923\|Ga0137359_11671177	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300012925\|Ga0137419_10569936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300012944\|Ga0137410_10838063	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300012948\|Ga0126375_11700546	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	547	Open in IMG/M
3300012948\|Ga0126375_11721975	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	544	Open in IMG/M
3300013297\|Ga0157378_12252330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300014325\|Ga0163163_12663719	Not Available	557	Open in IMG/M
3300015053\|Ga0137405_1408795	Not Available	5760	Open in IMG/M
3300015054\|Ga0137420_1317565	All Organisms → cellular organisms → Bacteria	4318	Open in IMG/M
3300015357\|Ga0134072_10391420	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	545	Open in IMG/M
3300015373\|Ga0132257_101456069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300016270\|Ga0182036_10341681	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300016341\|Ga0182035_12178160	Not Available	502	Open in IMG/M
3300017972\|Ga0187781_11306105	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300017975\|Ga0187782_11057459	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300017995\|Ga0187816_10263399	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300018433\|Ga0066667_12170790	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	516	Open in IMG/M
3300019789\|Ga0137408_1067809	All Organisms → cellular organisms → Bacteria → Acidobacteria	2279	Open in IMG/M
3300020170\|Ga0179594_10039400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1551	Open in IMG/M
3300020581\|Ga0210399_10032339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4178	Open in IMG/M
3300021168\|Ga0210406_10249692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1456	Open in IMG/M
3300021171\|Ga0210405_10850011	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300021181\|Ga0210388_10411920	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus	1188	Open in IMG/M
3300021420\|Ga0210394_10382307	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300021478\|Ga0210402_10325160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1425	Open in IMG/M
3300021478\|Ga0210402_11566135	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	586	Open in IMG/M
3300021559\|Ga0210409_10062182	All Organisms → cellular organisms → Bacteria → Acidobacteria	3486	Open in IMG/M
3300024182\|Ga0247669_1088552	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	521	Open in IMG/M
3300024251\|Ga0247679_1041423	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300024288\|Ga0179589_10231548	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300024331\|Ga0247668_1010037	All Organisms → cellular organisms → Bacteria → Acidobacteria	1976	Open in IMG/M
3300025898\|Ga0207692_10443130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300025916\|Ga0207663_11479520	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	547	Open in IMG/M
3300025935\|Ga0207709_11026474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300026304\|Ga0209240_1008720	All Organisms → cellular organisms → Bacteria	3835	Open in IMG/M
3300026324\|Ga0209470_1261920	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	685	Open in IMG/M
3300026325\|Ga0209152_10204074	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300026332\|Ga0209803_1089955	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1270	Open in IMG/M
3300026335\|Ga0209804_1057592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1876	Open in IMG/M
3300026497\|Ga0257164_1060377	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	620	Open in IMG/M
3300026538\|Ga0209056_10034144	All Organisms → cellular organisms → Bacteria	4753	Open in IMG/M
3300026557\|Ga0179587_10030096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3005	Open in IMG/M
3300027105\|Ga0207944_1008343	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	921	Open in IMG/M
3300027565\|Ga0209219_1092522	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	747	Open in IMG/M
3300027671\|Ga0209588_1153098	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300027825\|Ga0209039_10035021	All Organisms → cellular organisms → Bacteria → Acidobacteria	2382	Open in IMG/M
3300027855\|Ga0209693_10547593	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300027879\|Ga0209169_10041421	All Organisms → cellular organisms → Bacteria	2412	Open in IMG/M
3300027895\|Ga0209624_10975194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300027908\|Ga0209006_10514490	Not Available	997	Open in IMG/M
3300027908\|Ga0209006_11135416	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300028047\|Ga0209526_10092659	All Organisms → cellular organisms → Bacteria → Acidobacteria	2127	Open in IMG/M
3300028792\|Ga0307504_10395840	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	542	Open in IMG/M
3300028906\|Ga0308309_10001079	All Organisms → cellular organisms → Bacteria	16236	Open in IMG/M
3300030879\|Ga0265765_1002485	All Organisms → cellular organisms → Bacteria → Acidobacteria	1790	Open in IMG/M
3300031421\|Ga0308194_10101261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300031446\|Ga0170820_17575997	All Organisms → cellular organisms → Bacteria → Acidobacteria	997	Open in IMG/M
3300031719\|Ga0306917_10939107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300031720\|Ga0307469_10539428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1031	Open in IMG/M
3300031720\|Ga0307469_11903360	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	576	Open in IMG/M
3300031754\|Ga0307475_10608643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300031763\|Ga0318537_10150636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300031823\|Ga0307478_10243041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1461	Open in IMG/M
3300031879\|Ga0306919_10899723	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	679	Open in IMG/M
3300031910\|Ga0306923_11647663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300031912\|Ga0306921_11526516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300031941\|Ga0310912_10406222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1060	Open in IMG/M
3300031945\|Ga0310913_10194257	All Organisms → cellular organisms → Bacteria	1416	Open in IMG/M
3300031954\|Ga0306926_10447744	Not Available	1591	Open in IMG/M
3300031962\|Ga0307479_11537655	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	622	Open in IMG/M
3300032001\|Ga0306922_10550841	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300032173\|Ga0315268_10342965	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Paludisphaera → Paludisphaera borealis	1454	Open in IMG/M
3300032205\|Ga0307472_101446584	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	669	Open in IMG/M
3300032261\|Ga0306920_101530288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300032782\|Ga0335082_10798948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300033004\|Ga0335084_11098024	Not Available	798	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.42%
Host-Associated	Host-Associated	4.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.54%
Aquatic	Environmental → Aquatic	5.88%
Plants	Host-Associated → Plants	4.58%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.54%
Sediment	Environmental → Aquatic → Sediment	3.27%
Freshwater	Environmental → Aquatic → Freshwater	2.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.31%
Roots	Host-Associated → Plants → Roots	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.93%
Loam	Environmental → Terrestrial → Soil → Loam	16.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.96%
Lake	Environmental → Aquatic → Freshwater → Lake	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.27%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.31%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.65%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.65%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.23%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.31%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.31%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.31%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.65%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024331	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027105	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF018 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030879	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.16
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.16
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045307

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1004430892	3300002245	Forest Soil	LDQIWPEKKKLEPLFFWNFDTPKAGEPLSYGKTSLP*
JGI25616J43925_100918072	3300002917	Grasslands Soil	KNEELFEGDTLNHVWPEEKFKPLWFWNYDQSKPGTPLSYGKTVQP*
JGIcombinedJ51221_104689252	3300003505	Forest Soil	FEGDTLNQVWPEQKKLEPLWFWNYDQPKKGEPLSYGTTTQP*
Ga0062389_1043014351	3300004092	Bog Forest Soil	GDTLDQVWPEQKKLEPLYFWNFDKPKVGEPLSYGKTVTP*
Ga0058899_108671372	3300004631	Forest Soil	LFEGDTLNEVWPEQKKLEPLWFWNNYDVPKAGEPLSYGNTVQP*
Ga0066690_101068683	3300005177	Soil	FEGDTLNQVWPEQKKLEPLWFWSNYDVPKPGEPLRYGKTAQP*
Ga0066676_103497972	3300005186	Soil	FEGDTLNQVWPEQKKLDPLWFWNNYDAPKAGDPLNYGKITQP*
Ga0066388_1052299381	3300005332	Tropical Forest Soil	FEGDTLNQVWPEQKKLEPLWFWNNYDAPKSGEALGYGKTATP*
Ga0070709_103659202	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	DTLNQVWPEQKKLEPLWFWNNYDAPKAGDPLEYGKTVQP*
Ga0070708_1009208922	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VFEGDTLNQVWPEQKKLEPLWFWNNYDAPKAGDPLQYGKTVQP*
Ga0066689_100695361	3300005447	Soil	FEGDTLNQVWPEQKKMEPLWFWNNYDTPKPGDPLNYGKTTQP*
Ga0070706_1014565751	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GDTLNQVWPEQKRLEPLWFWNNYDVPKAGEPLNYGKTVQP*
Ga0070699_1017821021	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	FEGDTLNQVWPEQKKLEPLWFWNNYDAPKAGDPLQYGKTVQP*
Ga0070732_103078432	3300005542	Surface Soil	QVWPEQKKLEPLFFWNYDTPKAGEPLSYGKTTLP*
Ga0066692_103487951	3300005555	Soil	GELFEGDTLDQVWPEQRKLGPLWFWNNYDVPKAGDPLSYGKTTQP*
Ga0066704_100678701	3300005557	Soil	NQVWPEQKKLEPLWFRNYDQPKTDGSLSYGKTTTP*
Ga0066670_103220132	3300005560	Soil	GDTLNEVWPEQKKLEPLWFWNYDQPKTGTSMSYGKTMLP*
Ga0066691_102806701	3300005586	Soil	DTLNQVWPEQKKLEPLWFWNNYDAPKAGDPLQYGKTVQP*
Ga0070763_105379761	3300005610	Soil	NQVWPEQKKLEPLYFWNFDAPKAGEPLSYGKTVTP*
Ga0068862_1019199562	3300005844	Switchgrass Rhizosphere	ELFEGDTLNQVWPEQRKLEPLWFWNKYDEPKTGDPLSYGKTAAP*
Ga0075023_1005262221	3300006041	Watersheds	LDQVWPEQKKLEPLWFWNFDKPKAGEPLHYGVMTKP*
Ga0066652_1013925571	3300006046	Soil	GEVFEGDTLNQVWPEQKKLEPLWFWNNYDAPKAGEPLQYGKTAQP*
Ga0075017_1011639962	3300006059	Watersheds	NEVWPEQKKLEPLWFWNNYDVPKSGDPLSYGKTTQP*
Ga0075015_1006955621	3300006102	Watersheds	FEGDTLDQVWPEQKKLGPLYFWNFDKPKAGEPLSYGKTVTP*
Ga0075030_1003656061	3300006162	Watersheds	TLNQVWPEQKKLEPLFFWNNYDVPKSGDPLSYGKPTQP*
Ga0070716_1007244352	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	FEGDTLDQVWPEQKKLEPLYFWNFDKPKAGEPLSYGKTLNP*
Ga0070712_1014023501	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	NQVWPEQKKLEPLWFWNNYDVPKSGEPLQYGRTTQP*
Ga0070765_1008497092	3300006176	Soil	NGELFEGDTLDQVWPEQKKLEPLYFWNFDKPKAGEPLSYGKTVNP*
Ga0070765_1015749642	3300006176	Soil	TLNQVWPDQKKLEPLYFWNYDAPKATEPLSYGKTVTP*
Ga0075021_111684492	3300006354	Watersheds	DTLNEVWPEQKKLEPLWFWNNYDVPKAGDPLSYGKTTQP*
Ga0066658_109246582	3300006794	Soil	TLNQVWPEQRKLEPLWFWNNYDVPKAGEPLNYGKTIQP*
Ga0066659_108634822	3300006797	Soil	FEGDTLNEVWPEQKKLEPLWFWNYDQPKPGAPLSYGKTMLP*
Ga0079221_107899522	3300006804	Agricultural Soil	FEGDTLNEIWPEQKKLEPLWFWNYDQPKSGAPMSYGKTMLP*
Ga0075425_1019109602	3300006854	Populus Rhizosphere	ELFEGDTLNQVWPEQKKLEPLWFWNSYDTPKAGEPLSYGKTTTP*
Ga0099791_101654531	3300007255	Vadose Zone Soil	GDTLNEVWPEQKKLEPLWFWNDYDAPKAGNPLGYGKTTQP*
Ga0099793_100415361	3300007258	Vadose Zone Soil	VWPEQKKLEPLWFWNNYDVPKAGEPLNYGKTAQP*
Ga0099794_103914332	3300007265	Vadose Zone Soil	VWPEQKKLEPLWFWNNYDVPKAGEPLNYGKTLQP*
Ga0099794_107439901	3300007265	Vadose Zone Soil	GDTLNEVWPEQKKLEPLWFWNNYDVPKAGEPLNYGKTVQP*
Ga0099829_103169142	3300009038	Vadose Zone Soil	VWPEQKKLEPLFFWNHYDAPKAGEPLSYGKTAQP*
Ga0099830_102739061	3300009088	Vadose Zone Soil	NGELFEGDTLDQVWPEQKKLEPLFFWSYDTPKAGESLSYGKTTLP*
Ga0075423_106770941	3300009162	Populus Rhizosphere	LFEGDTLNQVWPEQKKLEPLWFWNNYDEPKAGDPLSYGKTATP*
Ga0126374_103078422	3300009792	Tropical Forest Soil	ELFEGDTLNQVWPEQKKLEPLWFWNKYDEPKAGDSLSYGKTANP*
Ga0126380_113741601	3300010043	Tropical Forest Soil	EGDTMNQVWPEQKKLEPLWFWNNYDVPKAGDPLSYGKTAQP*
Ga0126384_100810441	3300010046	Tropical Forest Soil	TLNQVWPEQKKLEPLWFWNNYDQPKAGDALGYGKTATP*
Ga0134064_101342292	3300010325	Grasslands Soil	EGDTLNEMWPEQKKLEPLWFWNYDQPKTGTSMSYGKTMLP*
Ga0134064_103389282	3300010325	Grasslands Soil	MNGVGVVDETLNQVRPEQKKLEPLFFWNNYDVPTPGEPLSYGKTTTP*
Ga0134065_104989921	3300010326	Grasslands Soil	LDQVWPEQKKLGPLWFWNSYDVPKAGDPLSYGKTTQP*
Ga0126370_113347801	3300010358	Tropical Forest Soil	GELFEGDTLDQVWPEQKKLAPLFFWNHYDEPKAGDPLSYGKTTQP*
Ga0126376_125605892	3300010359	Tropical Forest Soil	VWPEQKKLEPLWFWNSYDAPKAGEPLHYGNTMQP*
Ga0126378_107182561	3300010361	Tropical Forest Soil	GELFEGDTLNQVWPEEKKLEPLFFSNSYDVPKSGDPLSYGKTTTP*
Ga0126378_122254461	3300010361	Tropical Forest Soil	GELFEGDTLNQVWPEEKKLEPLFFSNSYDVPKSGDPLSYGRTTTP*
Ga0126378_125702182	3300010361	Tropical Forest Soil	LNQVWPEQKKLEPLWFWNYDQPKAGAPMSYGKTMLP*
Ga0126377_115112141	3300010362	Tropical Forest Soil	LFEGDTLNQVWPEQKKLEPLWFWNKYDEPKAGDPLSCGKAATP*
Ga0136449_1043303502	3300010379	Peatlands Soil	KNGVLYEGDTLNQLWPEQKKLAALWFWDFDKPKAGEPLQYGATNKP*
Ga0150983_136050251	3300011120	Forest Soil	GELFEGDTLDQVWPEQKKLEPLHFWNFDKPKAGEPLSYGKTANP*
Ga0150983_142843061	3300011120	Forest Soil	ELFEGDTLDEVWPDEKKLEPLYFWSFDKPKAGEPLSYGKTVNP*
Ga0137391_104515651	3300011270	Vadose Zone Soil	FEGDTLNQVWPEQKKLEPLWFWNNYDAPKPGEPLNYGKTAQP*
Ga0137391_110066072	3300011270	Vadose Zone Soil	EVWPEQKKLEPLWFWNNYDAPKAGDPLSYGKTTQP*
Ga0137393_108123662	3300011271	Vadose Zone Soil	LDQEWRGQKTFEPLWFWKNYDEPKPGEPLNYGKTAQP*
Ga0137388_101705461	3300012189	Vadose Zone Soil	FEGDTLNQVWPEQKTLEPLWFWNNHDAPKAGEPLSYGATAQP*
Ga0137388_102801083	3300012189	Vadose Zone Soil	DTLNQVWPEQKKLEPLWFWNYDQPKNGAPLSYGKTATP*
Ga0137388_111228542	3300012189	Vadose Zone Soil	VWPEQKKLEPLWFWNNYDAPKAGDPLSYGKTTQP*
Ga0137383_100199785	3300012199	Vadose Zone Soil	NQVWPEQKKLEPLWFWNNYDVPKAGEPLNYGKTTQP*
Ga0137382_107979921	3300012200	Vadose Zone Soil	DTLNQVWPEQKKLEPLWFWNNYDVPKPGEPLNYGETKQP*
Ga0137363_114694922	3300012202	Vadose Zone Soil	DTLNQVWPEQKKLEPLWFWNDYDVPKSGEPLSYGKTTQP*
Ga0137363_118312272	3300012202	Vadose Zone Soil	LNQVWPEQKKLEPLWFWNDYDVPKSGAPLSYGKTVTP*
Ga0137399_107687221	3300012203	Vadose Zone Soil	ELFEGETLNQVWPEQKKLPPLWFWNNYDVPKAGEPLRYGKTVQP*
Ga0137399_112077432	3300012203	Vadose Zone Soil	DQIWPEQKKLEPLFFWNYDTPKAGEPLSYGKTSLP*
Ga0137378_116612552	3300012210	Vadose Zone Soil	EGDTLDQVWPEQKKLEPLWFWNNYDVPKSGDPLSYGKTTQP*
Ga0137377_101165413	3300012211	Vadose Zone Soil	LDQVWPEQKKLEPLWFWNNYDVPKAGEPLQYGKTATP*
Ga0137370_101344791	3300012285	Vadose Zone Soil	DTLNQVWPEQKKLEPLWFWNNYDVPKAGEPLNYGKTTQP*
Ga0137386_100629824	3300012351	Vadose Zone Soil	FEGDTLNQVWPEQKKLEPLWFWSYDQPKTDGSLSYGKTTTP*
Ga0137360_103272482	3300012361	Vadose Zone Soil	DTLNQVWPEQKKLEPLWFWNDYDVPKSGAPLSYGKTVTP*
Ga0137361_107335171	3300012362	Vadose Zone Soil	GDTLNEVWPEQKKLEPLWFWNNYDVPKAGEPLSYGKTAQP*
Ga0137398_107962141	3300012683	Vadose Zone Soil	TLDQIWPEQKKLEPLFFWNYDTPKAGEPLSYGKTTLP*
Ga0137398_111160162	3300012683	Vadose Zone Soil	GDTLNEVWPEQKKLEPLWFWNNYDAPKAGNPLSYGKTTQP*
Ga0137396_104140232	3300012918	Vadose Zone Soil	DTLNQVWPEQKKLEPLWFWNNYDVPKAGEPLNYGKTAQP*
Ga0137359_116711772	3300012923	Vadose Zone Soil	LNQVWPEQKKLDPLWFWNYDQPNEGPPLSYGKPTQP*
Ga0137419_105699361	3300012925	Vadose Zone Soil	TLNQVWPEQKKLEPLWFWNNYDVPKAGEPLQYGKTATP*
Ga0137410_108380632	3300012944	Vadose Zone Soil	DTLNQVWPEQKKLEPLWFWNNYDVPKAGEPLSYGKTVQP*
Ga0126375_117005461	3300012948	Tropical Forest Soil	EGDTLNQVWPEQKKLEPLWFWSNYDAPKSGDALSYGKTATP*
Ga0126375_117219751	3300012948	Tropical Forest Soil	FEGDTLNQVWPEQKKLEPLWFWNYDQPKQGGALSYGKTTLP*
Ga0157378_122523301	3300013297	Miscanthus Rhizosphere	NQVWPEQKKLEPLWFWNKYDEPKVGDPLSYGKTATP*
Ga0163163_126637191	3300014325	Switchgrass Rhizosphere	LFEGDTLNQVWPEQKKLEPLWFWNKYDEPKAGDPLSYGKTATP*
Ga0137405_14087953	3300015053	Vadose Zone Soil	VKNGEVFEGGYAQPGVAEQKKLEPLWFWNNYDAPKAGEPLEYGKTVQP*
Ga0137420_13175653	3300015054	Vadose Zone Soil	LNEVWPEQKKLEPLWFWNNYDMPKQGEPLNYGRPNNLKP*
Ga0134072_103914201	3300015357	Grasslands Soil	KNGELFEGETLNQVWPEQKKLEPLFFWNNYDVPTPGEPLSYGKTTTP*
Ga0132257_1014560692	3300015373	Arabidopsis Rhizosphere	VWPEQKKLEPLWFWNSYDTPKAGEPLSYGKTTTP*
Ga0182036_103416811	3300016270	Soil	EVWPEEKKLEPLFFWNNYDVPKPGDPLSYGKTTTP
Ga0182035_121781601	3300016341	Soil	EGDTLNQLWPQQKKLEALWFWDFDKQKAGEPLQYGATNKP
Ga0187781_113061053	3300017972	Tropical Peatland	ELFEGDTLNQVWPEQKKLEPLWFWNYDVPKAGEPLSYGKTTQP
Ga0187782_110574591	3300017975	Tropical Peatland	DTLNQVWPEQKKLEPLFFWNNYDAPKAGEPLSYGKTVQP
Ga0187816_102633992	3300017995	Freshwater Sediment	EVWPEQKKLEPLWFWNNYDAPKAGEPLSYGKTTQP
Ga0066667_121707901	3300018433	Grasslands Soil	QVWPEQKKLEPLWFWNNYDAPKAGDPLSYGKTTQP
Ga0137408_10678091	3300019789	Vadose Zone Soil	DTLNRDTLNQVWPEQKKLEPLWFWNNYDAPKAGAPLSYGKTALP
Ga0179594_100394001	3300020170	Vadose Zone Soil	QVWPEQKKLEPLWFWNNYDVPKAGEPLNYGKTVQP
Ga0210399_100323394	3300020581	Soil	NQGWPEQKKLEPLWFWNNYDVPKAGEPLSYGKTATP
Ga0210406_102496922	3300021168	Soil	LFEGDTLNQVWPEQKKLEPLWFWNNHDVPKSGDPLSYGKTTQP
Ga0210405_108500112	3300021171	Soil	DTLDQIWPAQKKLEPLFFWNYDTPKAGEPLSYGKTGLP
Ga0210388_104119202	3300021181	Soil	ELFEGDTLNQVWPEQKKLEPLYFWNYDAPKVTEPLSYGKTVTP
Ga0210394_103823071	3300021420	Soil	NQVWPEQKKLEPLWFWNYDQPKKGEPLSYGTTTQP
Ga0210402_103251602	3300021478	Soil	LNEVWPEQKKLEPLWFWNNYDVPKAGEPLSYGKTAQP
Ga0210402_115661352	3300021478	Soil	GDTLNELWPEQKKLEPLWFWNNYDVPKAGEPLSYGKITQP
Ga0210409_100621821	3300021559	Soil	DSLDQVWPQQKKLEPLWFWSFDKPKAGEPLHYGAMTKP
Ga0247669_10885522	3300024182	Soil	NGELFVGDTLDQVWPEQKKLEPLYFWNFDKPKAGEPLSYGKTANP
Ga0247679_10414232	3300024251	Soil	TLDQVWPEQKKLEPLYFWNFDKPKAGAPLSYGKTANP
Ga0179589_102315481	3300024288	Vadose Zone Soil	FEGDTLNQVWPEQKKLEPLWFWNNYDAPKSGAPLSYGKTVTP
Ga0247668_10100371	3300024331	Soil	LDQVWPEQKKLGPLWFWNNYDVPKAGDPLSYGKTAQP
Ga0207692_104431302	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	NGELFEGDTLDQVWPEQKKLEPLFFWNYDTPKAGDPLSYGKTSLP
Ga0207663_114795201	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	DTLDQVWPEQKKLEPLYFWNFDKPKAGEPLSYGKTVNP
Ga0207709_110264742	3300025935	Miscanthus Rhizosphere	QVWPEQKKLEPLWFWNKYDEPKAGDPLSYGKTATP
Ga0209240_10087205	3300026304	Grasslands Soil	LNQVWPEQKKLEPLWFWNNYDVPKAGEPLNYGKTAQP
Ga0209470_12619201	3300026324	Soil	FEGDTLNQVWPEQKKLDPLWLWNNYDAPKAGDPLNYGKITQP
Ga0209152_102040741	3300026325	Soil	TLNQVWPEQRKLEPLWFWNNYDVPKAGEPLNYGKTIQP
Ga0209803_10899552	3300026332	Soil	GEMFEGDTLNQVWPEQKKMEPLWFWNNYDTPKPGDPLNYGKTTQP
Ga0209804_10575921	3300026335	Soil	FEGDTLNQVWPEQKKLEPLWFWSNYDVPKPGEPLRYGKTAQP
Ga0257164_10603771	3300026497	Soil	NQVWPEQKKLEPLWFWNNYDVPKPGEPLNYGKTVQP
Ga0209056_100341441	3300026538	Soil	LNQVWPEQKKLEPLWFWNNYDVPKAGEPLNYGKTVQP
Ga0179587_100300961	3300026557	Vadose Zone Soil	LFEGDTLNQVWPEQKKLEPLWFWNNYDAPRAGDPLTYGKTTQP
Ga0207944_10083432	3300027105	Forest Soil	DTLNQLWPQQKKLEALWFWDFDKPKAGEPLQYGATNKP
Ga0209219_10925221	3300027565	Forest Soil	FEGDTLDEVWPEQKKLEPLYFWNFDKPKVGEPLSYGKTVNP
Ga0209588_11530981	3300027671	Vadose Zone Soil	EVWPEQKKLEPLWFWNNYDVPKAGEPLNYGKTLQP
Ga0209039_100350211	3300027825	Bog Forest Soil	LFEGDTLDQVWPEQKKLEPLYFWNFDKPKVGEPLSYGKTVTP
Ga0209693_105475932	3300027855	Soil	NQVWPEQKKLEPLYFWNFDAPKAGEPLSYGKTVTP
Ga0209169_100414211	3300027879	Soil	EMFEGDTLNQVWPEQKKLEPLYFWNYDAPKVTEPLSYGKTVTP
Ga0209624_109751942	3300027895	Forest Soil	DQVWPEQKKLEPLWFWNNYDAPKAGEPLSYGPTVQP
Ga0209006_105144901	3300027908	Forest Soil	TLDQVWPQKEKLEPLWFWNNYDVPKAGEPLSYGPTVQP
Ga0209006_111354162	3300027908	Forest Soil	LKQVWPERKKLEPLYFWNYDAPKVTKPLSYGKTVTP
Ga0209526_100926591	3300028047	Forest Soil	LEGDTLDQIWPEKKKLEPLFFWNFDTPKAGEPLSYGKTSLP
Ga0307504_103958402	3300028792	Soil	NGELFEGDTLDQVWPEQKKLEPLFFWNFDTPKAGEPLSYGKTTLP
Ga0308309_100010791	3300028906	Soil	DQVWPQQKKLEPLWFWSFDKAKAGEPLHYGDMTKP
Ga0265765_10024851	3300030879	Soil	ELFEGDTLDQVWPEQKKLEPLYFWNFDKPKAGEPLSYGKTVNP
Ga0308194_101012612	3300031421	Soil	FEGDTLNQVWPQQKKLEPLWFWNNYDVPKPGEPLNYGETKQP
Ga0170820_175759971	3300031446	Forest Soil	GDTLDQVWPEQKKLEPLWFWNNYDVPKAGEPLQYGKTATP
Ga0306917_109391071	3300031719	Soil	FEGDTLDQVWPEQKKLQPLWFWGNYDVPKSGEPLSYGTTTTP
Ga0307469_105394281	3300031720	Hardwood Forest Soil	NQVWPEQKKLEPLWFWNNYDTPKAGEPLSYGKTTAP
Ga0307469_119033602	3300031720	Hardwood Forest Soil	NQVWPEQKKLEPLWFWNNYDVPNSGAPLSYGKTVTP
Ga0307475_106086431	3300031754	Hardwood Forest Soil	FEGDTLNQVWPEQKKLEPLWFWNYDTPKAGEPLSYGKTVTP
Ga0318537_101506361	3300031763	Soil	FEGDTLDQVWPEEKKLETLFFWNHYDVPKPGEPLSYGKTTAP
Ga0307478_102430412	3300031823	Hardwood Forest Soil	LDQVWPEQKKLGPLYFWNFDKPKVGEPLSYGKTVTP
Ga0306919_108997232	3300031879	Soil	DTLNQLWPEQKKLEALWFWDFDKPKAGEPLQYGASNKP
Ga0306923_116476632	3300031910	Soil	QVWPEEKKLEPLFFWNNYDVPKPGDPLSYGKTTTP
Ga0306921_115265161	3300031912	Soil	LNQVWPEQKKLEPLWFWNNYDVPKAGEPLQYGKTTTP
Ga0310912_104062222	3300031941	Soil	TLDQVWPQQKKLPPLWFWSNYDVPKSGEPLSYGKTATP
Ga0310913_101942572	3300031945	Soil	DQIWPEQKKLEPLWFWKFDQPKKGEPLHYGTTTKP
Ga0306926_104477443	3300031954	Soil	LNQLWPEQKKLEALWFWDFDKPKSGAPLQYGPTNKP
Ga0307479_115376551	3300031962	Hardwood Forest Soil	FEGDTLDQVWPEQKKLGPLYFWNFDKPKVGEPLSYGKTVNP
Ga0306922_105508411	3300032001	Soil	FEGDTLNQVWPEQKKLEPLWFWNNYDVPKAGEPLQYGKTTTP
Ga0315268_103429651	3300032173	Sediment	LDQVWPEQKKLEPLWFWNFDQPKAGDSLHYGETKKP
Ga0307472_1014465841	3300032205	Hardwood Forest Soil	FEGDTLNQVWPEQKKLEPLWFWNNYDVPKAGEPLSYGKTVQP
Ga0306920_1015302881	3300032261	Soil	TLDQVWPEQKKLEPLWFWSDYDVPKSGEPLSYGKTTTP
Ga0335082_107989482	3300032782	Soil	FEGDTLNQVWPEQKKLEPLWFWNNYDVPKSGDPLSYGKTVQP
Ga0335084_110980242	3300033004	Soil	DTMNEIWPEEKKLEPLWFWNFDQPKSGEPLSYGKPTAP

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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