Metagenome / Metatranscriptome Family F045171

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F045171
Family Type	Metagenome / Metatranscriptome
Number of Sequences	153
Average Sequence Length	59 residues
Representative Sequence	MPHLLDPKRIDTHATYLAALHELDALMAEDPDAAASRRIDELFALIEEYELRQPAPESRA
Number of Associated Samples	104
Number of Associated Scaffolds	153

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.27 %
% of genes near scaffold ends (potentially truncated)	25.49 %
% of genes from short scaffolds (< 2000 bps)	87.58 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.510 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (28.105 % of family members)
Environment Ontology (ENVO)	Unclassified (41.830 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (44.444 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.91% β-sheet: 0.00% Coil/Unstructured: 59.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 153 Family Scaffolds
PF02423	OCD_Mu_crystall	39.87
PF14542	Acetyltransf_CG	20.92
PF02824	TGS	12.42
PF12697	Abhydrolase_6	2.61
PF14850	Pro_dh-DNA_bdg	1.31
PF00450	Peptidase_S10	1.31
PF13502	AsmA_2	1.31
PF00171	Aldedh	1.31
PF05726	Pirin_C	0.65
PF09791	Oxidored-like	0.65
PF00535	Glycos_transf_2	0.65
PF02900	LigB	0.65
PF00939	Na_sulph_symp	0.65
PF04055	Radical_SAM	0.65
PF12695	Abhydrolase_5	0.65
PF02775	TPP_enzyme_C	0.65
PF03466	LysR_substrate	0.65

COG ID	Name	Functional Category	% Frequency in 153 Family Scaffolds
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	39.87
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	1.31
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	1.31
COG2939	Carboxypeptidase C (cathepsin A)	Amino acid transport and metabolism [E]	1.31
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	1.31
COG0471	Di- and tricarboxylate antiporter	Carbohydrate transport and metabolism [G]	0.65
COG1055	Na+/H+ antiporter NhaD or related arsenite permease	Inorganic ion transport and metabolism [P]	0.65
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.16 %
Unclassified	root	N/A	24.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.16 %
Unclassified	root	N/A	24.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.51 %
Unclassified	root	N/A	24.84 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.65 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	64.71 %
Unclassified	root	N/A	24.84 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.31 %
Asgard group	clade	All Organisms → cellular organisms → Archaea → Asgard group	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	11.76 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.31 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.31 %
Candidatus Lokiarchaeota	phylum	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.84 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.88 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.65 %
unclassified Lokiarchaeota	no rank	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota	0.65 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.65 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.84 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	1.31 %
Candidatus Lokiarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	0.65 %
Candidatus Competibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae	0.65 %
gamma proteobacterium NOR5-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	0.65 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.84 %
Rubrivivax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax	1.31 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.65 %
Plasticicumulans	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Plasticicumulans	0.65 %
Candidatus Lokiarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	0.65 %
gamma proteobacterium NOR5-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.84 %
unclassified Rubrivivax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax → unclassified Rubrivivax	1.31 %
unclassified Opitutaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae	0.65 %
Plasticicumulans lactativorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Plasticicumulans → Plasticicumulans lactativorans	0.65 %
Candidatus Lokiarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	0.65 %
gamma proteobacterium NOR5-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.84 %
Rubrivivax sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax → unclassified Rubrivivax → Rubrivivax sp.	1.31 %
Opitutaceae bacterium EW11	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium EW11	0.65 %
Plasticicumulans lactativorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Plasticicumulans → Plasticicumulans lactativorans	0.65 %
Candidatus Lokiarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	0.65 %
gamma proteobacterium NOR5-3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003858\|Ga0031656_10055723	All Organisms → cellular organisms → Bacteria → Proteobacteria	1550	Open in IMG/M
3300003859\|Ga0031653_10099010	All Organisms → cellular organisms → Bacteria → Proteobacteria	764	Open in IMG/M
3300003861\|Ga0031654_10010768	All Organisms → cellular organisms → Bacteria → Proteobacteria	2685	Open in IMG/M
3300003861\|Ga0031654_10073787	All Organisms → cellular organisms → Bacteria → Proteobacteria	952	Open in IMG/M
3300003861\|Ga0031654_10149205	All Organisms → cellular organisms → Bacteria → Proteobacteria	662	Open in IMG/M
3300004047\|Ga0055499_10036461	All Organisms → cellular organisms → Bacteria → Proteobacteria	738	Open in IMG/M
3300004047\|Ga0055499_10057535	All Organisms → cellular organisms → Bacteria → Proteobacteria	640	Open in IMG/M
3300004050\|Ga0055491_10021231	All Organisms → cellular organisms → Bacteria → Proteobacteria	1280	Open in IMG/M
3300004114\|Ga0062593_100016117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3755	Open in IMG/M
3300004146\|Ga0055495_10158395	All Organisms → cellular organisms → Bacteria → Proteobacteria	576	Open in IMG/M
3300004156\|Ga0062589_100827413	All Organisms → cellular organisms → Bacteria → Proteobacteria	842	Open in IMG/M
3300004156\|Ga0062589_101963248	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300004157\|Ga0062590_100677958	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300004480\|Ga0062592_100996626	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300004778\|Ga0062383_10577668	All Organisms → cellular organisms → Bacteria → Proteobacteria	568	Open in IMG/M
3300004778\|Ga0062383_10717648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → gamma proteobacterium NOR5-3	511	Open in IMG/M
3300005330\|Ga0070690_101277553	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300005332\|Ga0066388_102770551	All Organisms → cellular organisms → Bacteria → Proteobacteria	895	Open in IMG/M
3300005347\|Ga0070668_100019767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5072	Open in IMG/M
3300005355\|Ga0070671_100332618	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300005445\|Ga0070708_100225565	All Organisms → cellular organisms → Bacteria → Proteobacteria	1758	Open in IMG/M
3300005487\|Ga0074211_156205	All Organisms → cellular organisms → Bacteria → Proteobacteria	853	Open in IMG/M
3300005488\|Ga0074213_119698	All Organisms → cellular organisms → Bacteria → Proteobacteria	854	Open in IMG/M
3300005526\|Ga0073909_10679624	All Organisms → cellular organisms → Bacteria → Proteobacteria	515	Open in IMG/M
3300005639\|Ga0077110_1011715	All Organisms → cellular organisms → Bacteria → Proteobacteria	1360	Open in IMG/M
3300005833\|Ga0074472_10907101	All Organisms → cellular organisms → Bacteria → Proteobacteria	1588	Open in IMG/M
3300005836\|Ga0074470_10798160	All Organisms → cellular organisms → Bacteria → Proteobacteria	1339	Open in IMG/M
3300005836\|Ga0074470_11189519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	22240	Open in IMG/M
3300006057\|Ga0075026_100046604	All Organisms → cellular organisms → Bacteria → Proteobacteria	2031	Open in IMG/M
3300006237\|Ga0097621_100339301	All Organisms → cellular organisms → Bacteria → Proteobacteria	1334	Open in IMG/M
3300006358\|Ga0068871_100608720	All Organisms → cellular organisms → Bacteria → Proteobacteria	994	Open in IMG/M
3300006871\|Ga0075434_100903833	All Organisms → cellular organisms → Bacteria → Proteobacteria	898	Open in IMG/M
3300006881\|Ga0068865_101816336	All Organisms → cellular organisms → Bacteria → Proteobacteria	551	Open in IMG/M
3300006904\|Ga0075424_101290657	All Organisms → cellular organisms → Bacteria → Proteobacteria	776	Open in IMG/M
3300007076\|Ga0075435_101416902	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300009091\|Ga0102851_11790224	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300009131\|Ga0115027_11084600	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
3300009176\|Ga0105242_10302756	All Organisms → cellular organisms → Bacteria → Proteobacteria	1460	Open in IMG/M
3300009870\|Ga0131092_10764720	All Organisms → cellular organisms → Bacteria → Proteobacteria	812	Open in IMG/M
3300010400\|Ga0134122_12158902	Not Available	599	Open in IMG/M
3300011119\|Ga0105246_11796724	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300013297\|Ga0157378_12303556	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → unclassified Opitutaceae → Opitutaceae bacterium EW11	590	Open in IMG/M
3300013308\|Ga0157375_11682020	Not Available	751	Open in IMG/M
3300015084\|Ga0167654_1052436	All Organisms → cellular organisms → Bacteria → Proteobacteria	546	Open in IMG/M
3300015195\|Ga0167658_1006249	All Organisms → cellular organisms → Bacteria → Proteobacteria	3996	Open in IMG/M
3300015195\|Ga0167658_1034273	Not Available	1319	Open in IMG/M
3300015371\|Ga0132258_10623055	All Organisms → cellular organisms → Bacteria	2711	Open in IMG/M
3300015371\|Ga0132258_11825990	Not Available	1531	Open in IMG/M
3300015372\|Ga0132256_102098137	Not Available	671	Open in IMG/M
3300015374\|Ga0132255_102058917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	869	Open in IMG/M
3300016270\|Ga0182036_10332779	Not Available	1165	Open in IMG/M
3300018064\|Ga0187773_11004421	Not Available	547	Open in IMG/M
3300018072\|Ga0184635_10198586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	800	Open in IMG/M
3300018081\|Ga0184625_10114519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax → unclassified Rubrivivax → Rubrivivax sp.	1399	Open in IMG/M
3300021346\|Ga0210335_1197275	All Organisms → cellular organisms → Bacteria → Proteobacteria	663	Open in IMG/M
3300021859\|Ga0210334_11108038	All Organisms → cellular organisms → Bacteria → Proteobacteria	922	Open in IMG/M
3300022214\|Ga0224505_10155258	All Organisms → cellular organisms → Bacteria → Proteobacteria	883	Open in IMG/M
3300022309\|Ga0224510_10054320	All Organisms → cellular organisms → Bacteria → Proteobacteria	2165	Open in IMG/M
3300025899\|Ga0207642_11129784	Not Available	507	Open in IMG/M
3300025922\|Ga0207646_10599866	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300025923\|Ga0207681_10651982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	873	Open in IMG/M
3300025930\|Ga0207701_10113223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2424	Open in IMG/M
3300025930\|Ga0207701_10653830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	892	Open in IMG/M
3300025934\|Ga0207686_10507337	All Organisms → cellular organisms → Bacteria → Proteobacteria	937	Open in IMG/M
3300025938\|Ga0207704_11098234	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300025940\|Ga0207691_11614966	Not Available	527	Open in IMG/M
3300025950\|Ga0210134_1043031	All Organisms → cellular organisms → Bacteria → Proteobacteria	631	Open in IMG/M
3300027840\|Ga0209683_10434831	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300027897\|Ga0209254_10019475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6199	Open in IMG/M
3300027897\|Ga0209254_10157427	All Organisms → cellular organisms → Bacteria → Proteobacteria	1854	Open in IMG/M
3300027897\|Ga0209254_10242466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1414	Open in IMG/M
3300027897\|Ga0209254_10633539	Not Available	748	Open in IMG/M
3300027899\|Ga0209668_10659880	All Organisms → cellular organisms → Bacteria → Proteobacteria	701	Open in IMG/M
3300027900\|Ga0209253_10000524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	33200	Open in IMG/M
3300027900\|Ga0209253_10007097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	9674	Open in IMG/M
3300027900\|Ga0209253_10668719	Not Available	753	Open in IMG/M
3300027902\|Ga0209048_10001469	All Organisms → cellular organisms → Bacteria → Proteobacteria	24228	Open in IMG/M
3300027902\|Ga0209048_10006729	All Organisms → cellular organisms → Bacteria → Proteobacteria	10724	Open in IMG/M
3300027902\|Ga0209048_10567664	All Organisms → cellular organisms → Archaea → Asgard group → Candidatus Lokiarchaeota → unclassified Lokiarchaeota → Candidatus Lokiarchaeota archaeon	759	Open in IMG/M
3300027902\|Ga0209048_10603550	Not Available	731	Open in IMG/M
3300027902\|Ga0209048_10745158	All Organisms → cellular organisms → Bacteria → Proteobacteria	642	Open in IMG/M
3300027910\|Ga0209583_10515105	Not Available	594	Open in IMG/M
3300027975\|Ga0209391_10101558	Not Available	1278	Open in IMG/M
3300028380\|Ga0268265_11727513	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	632	Open in IMG/M
3300028381\|Ga0268264_11058456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	819	Open in IMG/M
3300031232\|Ga0302323_102786307	Not Available	559	Open in IMG/M
3300031544\|Ga0318534_10093164	All Organisms → cellular organisms → Bacteria → Proteobacteria	1721	Open in IMG/M
3300031573\|Ga0310915_11131948	Not Available	543	Open in IMG/M
3300031707\|Ga0315291_11242704	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300031720\|Ga0307469_10241876	All Organisms → cellular organisms → Bacteria → Proteobacteria	1445	Open in IMG/M
3300031720\|Ga0307469_10505925	Not Available	1060	Open in IMG/M
3300031720\|Ga0307469_11301697	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300031740\|Ga0307468_100477956	All Organisms → cellular organisms → Bacteria → Proteobacteria	980	Open in IMG/M
3300031751\|Ga0318494_10813657	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300031765\|Ga0318554_10704957	Not Available	566	Open in IMG/M
3300031820\|Ga0307473_10264299	Not Available	1063	Open in IMG/M
3300031834\|Ga0315290_10009901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	7088	Open in IMG/M
3300031834\|Ga0315290_10544080	Not Available	1011	Open in IMG/M
3300031834\|Ga0315290_10635724	All Organisms → cellular organisms → Bacteria → Proteobacteria	924	Open in IMG/M
3300031834\|Ga0315290_10641675	All Organisms → cellular organisms → Bacteria → Proteobacteria	919	Open in IMG/M
3300031834\|Ga0315290_11098513	Not Available	665	Open in IMG/M
3300031834\|Ga0315290_11256989	Not Available	612	Open in IMG/M
3300031834\|Ga0315290_11608440	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300031873\|Ga0315297_10691005	All Organisms → cellular organisms → Bacteria → Proteobacteria	854	Open in IMG/M
3300031997\|Ga0315278_10066355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3572	Open in IMG/M
3300031997\|Ga0315278_10217590	All Organisms → cellular organisms → Bacteria → Proteobacteria	1968	Open in IMG/M
3300031997\|Ga0315278_10326065	All Organisms → cellular organisms → Bacteria → Proteobacteria	1587	Open in IMG/M
3300031997\|Ga0315278_10467238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Plasticicumulans → Plasticicumulans lactativorans	1300	Open in IMG/M
3300031997\|Ga0315278_11022891	All Organisms → cellular organisms → Bacteria → Proteobacteria	821	Open in IMG/M
3300031997\|Ga0315278_11504480	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300032043\|Ga0318556_10391339	Not Available	727	Open in IMG/M
3300032053\|Ga0315284_11487162	Not Available	720	Open in IMG/M
3300032090\|Ga0318518_10141280	Not Available	1220	Open in IMG/M
3300032118\|Ga0315277_10730489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rubrivivax → unclassified Rubrivivax → Rubrivivax sp.	947	Open in IMG/M
3300032118\|Ga0315277_10809845	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300032156\|Ga0315295_11250288	All Organisms → cellular organisms → Bacteria → Proteobacteria	726	Open in IMG/M
3300032163\|Ga0315281_12065025	All Organisms → cellular organisms → Bacteria → Proteobacteria	543	Open in IMG/M
3300032164\|Ga0315283_10657553	All Organisms → cellular organisms → Bacteria → Proteobacteria	1131	Open in IMG/M
3300032164\|Ga0315283_11644759	Not Available	652	Open in IMG/M
3300032164\|Ga0315283_11813468	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300032173\|Ga0315268_10967528	All Organisms → cellular organisms → Bacteria → Proteobacteria	857	Open in IMG/M
3300032173\|Ga0315268_11078430	Not Available	811	Open in IMG/M
3300032174\|Ga0307470_10408511	All Organisms → cellular organisms → Bacteria → Proteobacteria	963	Open in IMG/M
3300032174\|Ga0307470_11390996	All Organisms → cellular organisms → Bacteria → Proteobacteria	579	Open in IMG/M
3300032177\|Ga0315276_10557521	All Organisms → cellular organisms → Bacteria → Proteobacteria	1232	Open in IMG/M
3300032177\|Ga0315276_11797394	Not Available	630	Open in IMG/M
3300032177\|Ga0315276_11832081	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300032180\|Ga0307471_103249972	Not Available	576	Open in IMG/M
3300032256\|Ga0315271_10008596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6685	Open in IMG/M
3300032256\|Ga0315271_10010714	All Organisms → cellular organisms → Bacteria → Proteobacteria	6057	Open in IMG/M
3300032256\|Ga0315271_10094943	All Organisms → cellular organisms → Bacteria → Proteobacteria	2256	Open in IMG/M
3300032256\|Ga0315271_10377434	Not Available	1183	Open in IMG/M
3300032397\|Ga0315287_11349998	All Organisms → cellular organisms → Bacteria → Proteobacteria	813	Open in IMG/M
3300032397\|Ga0315287_11487268	Not Available	766	Open in IMG/M
3300032397\|Ga0315287_11802371	All Organisms → cellular organisms → Bacteria → Proteobacteria	681	Open in IMG/M
3300032401\|Ga0315275_10425825	Not Available	1488	Open in IMG/M
3300032401\|Ga0315275_11646978	All Organisms → cellular organisms → Bacteria → Proteobacteria	685	Open in IMG/M
3300032516\|Ga0315273_10459259	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300032516\|Ga0315273_10839159	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300032516\|Ga0315273_11029512	Not Available	1051	Open in IMG/M
3300032516\|Ga0315273_11807060	All Organisms → cellular organisms → Bacteria → Proteobacteria	735	Open in IMG/M
3300032516\|Ga0315273_13124872	Not Available	514	Open in IMG/M
3300032516\|Ga0315273_13192485	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300032770\|Ga0335085_10683303	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300032782\|Ga0335082_10552585	All Organisms → cellular organisms → Bacteria → Proteobacteria	1013	Open in IMG/M
3300032829\|Ga0335070_10420106	All Organisms → cellular organisms → Bacteria → Proteobacteria	1277	Open in IMG/M
3300033004\|Ga0335084_10629771	All Organisms → cellular organisms → Bacteria → Proteobacteria	1096	Open in IMG/M
3300033414\|Ga0316619_11690831	Not Available	571	Open in IMG/M
3300033416\|Ga0316622_102508861	Not Available	594	Open in IMG/M
3300033418\|Ga0316625_102236385	All Organisms → cellular organisms → Bacteria → Proteobacteria	546	Open in IMG/M
3300033433\|Ga0326726_10654689	Not Available	1012	Open in IMG/M
3300033482\|Ga0316627_100515591	Not Available	1066	Open in IMG/M
3300033803\|Ga0314862_0085948	All Organisms → cellular organisms → Bacteria → Proteobacteria	717	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.31%
Host-Associated	Host-Associated	15.03%
Engineered	Engineered	0.65%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	56.21%
Terrestrial	Environmental → Terrestrial	28.10%
Plants	Host-Associated → Plants	15.03%
Wastewater	Engineered → Wastewater	0.65%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	45.75%
Soil	Environmental → Terrestrial → Soil	26.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.50%
Marine	Environmental → Aquatic → Marine	5.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.23%
Sediment	Environmental → Aquatic → Sediment	4.58%
Peat	Environmental → Terrestrial → Peat	1.31%
Roots	Host-Associated → Plants → Roots	1.31%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.65%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	28.10%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	17.65%
Lentic	Environmental → Aquatic → Freshwater → Lentic	13.73%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.58%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.27%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.61%
Loam	Environmental → Terrestrial → Soil → Loam	2.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.31%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.31%
Sediment	Environmental → Aquatic → Marine → Sediment	1.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.31%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.31%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	28.10%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	13.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.58%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	3.27%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.27%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.31%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.31%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	1.31%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.31%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.65%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	28.10%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	11.76%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.23%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.92%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.27%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	1.96%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.96%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.96%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.96%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.31%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	1.31%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.31%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.65%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.65%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.65%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.65%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.65%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.65%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300003859	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR	Environmental	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300004047	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D1	Environmental	Open in IMG/M
3300004050	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004146	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005487	Sediment microbial communities from Lake Washington, Seattle, Washington, USA - Methanol enrichment	Environmental	Open in IMG/M
3300005488	Sediment ecosystem from Lake Washington, Seattle, Washington, USA - Methane enrichment	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005639	Sediment ecosystem from Lake Washington, Seattle, Washington, USA - Combined assembly reannotation Gp0050987, Gp0050988, Gp0050989, Gp0050990, Gp0050991	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015084	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-5a, rocky medial moraine)	Environmental	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300021346	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.374 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021859	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.306 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022214	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1	Environmental	Open in IMG/M
3300022309	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025950	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D2 (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027975	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0031656_100557232	3300003858	Freshwater Lake Sediment	MPHLLDPKRIDTQATYLAALRELDTLMDEDPDAGANNRIDELFALVEAYELRQPRPVPREA*
Ga0031653_100990101	3300003859	Freshwater Lake Sediment	MPHLLDPRRIDAHATYLAALHELDALMAEEPDSMASHRIDELFALIEDYELRQLPPASRAP*
Ga0031654_100107682	3300003861	Freshwater Lake Sediment	MPHLLDPKSLVSQAMYLAAIDELEALMADEPDASAGHRIDELFALIEDYGLRQPAAARA*
Ga0031654_100737872	3300003861	Freshwater Lake Sediment	MPHLFDPKQIDTHATYLAALHELDALMAEDPDAAANRRIDELFALIEEYELRQPDPRAA*
Ga0031654_101492051	3300003861	Freshwater Lake Sediment	MPHLLDPRHIDAHATYLAALHELDALMAEEPDAMASHRIDELFALIEDYELRQ
Ga0055499_100364611	3300004047	Natural And Restored Wetlands	MPHLLDPKRIDTQTSYLAALDELDALMTEEPEACAGHRIDELFALIEDYEMRQPMPGSRAA*
Ga0055499_100575351	3300004047	Natural And Restored Wetlands	MPHLLDPKRIDTHITYLAALCELDALMAEDPDAAANSRIDELFALIVEYELRRPAPNSRAA*
Ga0055491_100212312	3300004050	Natural And Restored Wetlands	MPHLLDPKRIDTQATYLAALHELDALMDEDADAGANHRIDELFALVEAYELRQSKPVMRDA*
Ga0062593_1000161172	3300004114	Soil	MAHPLDPKRIDEESKYLAALDELDALMAEEPDAGAERRIDELFALIEDYEMHKPARASQSG*
Ga0055495_101583951	3300004146	Natural And Restored Wetlands	MPHLLDPKRIDTQATYLAALHELDALMDEDADAGANNRIDELFALVEAYELRQSKPVVRDA*
Ga0062589_1008274132	3300004156	Soil	MAHPLDPKRIDNESNYRAALDELDALMAEEPDACAERRIDELFALIEEYELRKPLRAAHGD*
Ga0062589_1019632482	3300004156	Soil	MAHPLDPKRIDEESKYLAALDELDALMAEDPDAGAERRIDELFALIEDYEMHKPARAPQSG*
Ga0062590_1006779582	3300004157	Soil	MVHPLDPKRIDEESKFLAALDELDALMAEEPDAGAERRIDELFALIEDYEMHKPARASQSG*
Ga0062592_1009966261	3300004480	Soil	MAHPLDPKRIDEESKYLAALDELDALMAEEPDAGAERRIDELFALIEDYEMHKPARAPQSG*
Ga0062383_105776682	3300004778	Wetland Sediment	MPHLLDPKRIDKETTYRAALEELDALMEEEPDASAGHRIDELFALIEDYELRHGAPAD*
Ga0062383_107176481	3300004778	Wetland Sediment	MPHLLDPKRLATRTSYLAAIDELDALMAEEPDASAGHRIDELFALIEDYELRQFAAESLAG*
Ga0070690_1012775531	3300005330	Switchgrass Rhizosphere	RPAMPHLLDPSRIDNDSKYLAALDELDALMAEEPDAGAERRIDELFALIEEYELRKPGRAQAG*
Ga0066388_1027705511	3300005332	Tropical Forest Soil	MAHVLDPKRIDNETKYNAAMEELDALMAGEPDAGAERRIDELFELIEDYQLRTLVRGSRRADVV*
Ga0070668_1000197673	3300005347	Switchgrass Rhizosphere	MPHLFDPNRIDDESKYLAALDELDALMAEEPDAGAERRIDELFALIEEYELRKPGRELA*
Ga0070671_1003326182	3300005355	Switchgrass Rhizosphere	MPHLFDPNRIDDESKYLAALDELDALMAEEPDAGAERRIDELFALIEEYELRKPGREHA*
Ga0070708_1002255653	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MAHLLDPKRIDSETKYLAALDELDALMAEEPDACAGTRIDELFALIEDYELRQPVRASHAG*
Ga0074211_1562052	3300005487	Sediment	MPHLLDPKRIDTQATYLAALHELDALMAEDPEDASHNRIDELFALIEEYELRRPEPASRAA*
Ga0074213_1196982	3300005488	Sediment	MPHLLDPKRIDTLSIYLAAIDELDALMAEEPDTVSGHRIDELFALIEDYELRQPARASRAA*
Ga0073909_106796241	3300005526	Surface Soil	MPHLLDPSRIDNDSKYLAALDELDALMAEEPDAGAERRIDELFALIEEYELLRKPGRSQTG*
Ga0077110_10117153	3300005639	Sediment	MPHLLDPKRIDTLSIYLAAIDELDALMAEEPDTVSGHRIDELFALIEDYELRQPERASRAA*
Ga0074472_109071012	3300005833	Sediment (Intertidal)	MPHLLDPKRIDTQATYLAALHELDTLMDEDPDAGANNRIDELFALVEAYELRQPRPVPREA*
Ga0074470_107981602	3300005836	Sediment (Intertidal)	MPHALDPTNIDTQARYLAALDELDALMAEEPDSSAGHRIDELFALIEDYELRQSVEGTAAA*
Ga0074470_111895194	3300005836	Sediment (Intertidal)	MPHLLDPQHLDTHSRYRAALDELEALMAEEPDTCAGHRIDELFALIEEYELRQPLGRSPAD*
Ga0075026_1000466043	3300006057	Watersheds	MPHVLDPKRIDTQLTYLAALAELDALMAEEPDAVTSHRIDELFVLIEDYELRQPAPASLAA*
Ga0097621_1003393012	3300006237	Miscanthus Rhizosphere	MPHLFDPKRIDDDSKYLAALDELDALMAEEPDAGAERRIDELFALIEEYELRKPGRAQAG
Ga0068871_1006087201	3300006358	Miscanthus Rhizosphere	MPHLLDPKRIDSPATYRAALDELDALMAEEPDASAGHRIDELFALIEEYELRRPMTASPAARVIS*
Ga0075434_1009038331	3300006871	Populus Rhizosphere	MANLLDPKRIDNESKYIAALDELDALMGGEPDAGAERRIDELFALIEDYQLRR
Ga0068865_1018163361	3300006881	Miscanthus Rhizosphere	MAHPLDPKRIDNESNYRAALDELDALMAEEPDACAERRIDELFALIEEYELRK
Ga0075424_1012906572	3300006904	Populus Rhizosphere	MAHPLDPKRIDDESTYLAALDELDALMAEEPDACAERRIDELFALIEDYELHKPSRAAQSS*
Ga0075435_1014169022	3300007076	Populus Rhizosphere	MANLLDPKRIDNESKYIAALDELDALMGGEPDAGAERRIDELFALIEDYQLRRPSRAAQLG*
Ga0102851_117902241	3300009091	Freshwater Wetlands	IDTHETYLAALRELDALMAEDPDAAANRRIDELFALIEAYEMRAPEPASRTA*
Ga0115027_110846002	3300009131	Wetland	HLLDPKRIDTQATYLAALHELDTLMDEDPDAGANNRIDELFALVEAYELRQPRRVVREA*
Ga0105242_103027562	3300009176	Miscanthus Rhizosphere	MPHLLDPKRIDTQARYRAALDELDALMAEEPDVSAGHRIDELFALIEEYELRHSMPPTPAAQVVP*
Ga0131092_107647202	3300009870	Activated Sludge	MPHLLDPKHIDNHATYLAALHELDSLMAEDPDAAANRRIDELFALIEEYELRPGVPAARAG*
Ga0134122_121589022	3300010400	Terrestrial Soil	MAHPLDPKRIDNESNYRAALDELDALMAEEPDAGAERRIDELFALIEEYELRKPGRSQAG
Ga0105246_117967242	3300011119	Miscanthus Rhizosphere	MAHPLDPKRIDNESNYRAALDELDALMAEEPDACAERRIDELFSLIEEYELRKPLRAAH
Ga0157378_123035561	3300013297	Miscanthus Rhizosphere	AMPHLFDPNRIDDESKYLAALDELDALMAEEPDAGAERRIDELFALIEEYELRKPGREHA
Ga0157375_116820201	3300013308	Miscanthus Rhizosphere	RRSSMPHLLDPKRIDSPATYRAALDELDALMAEEPDASAGHRIDELFALIEEYELRRPMTASPAARVIS*
Ga0167654_10524362	3300015084	Glacier Forefield Soil	MPHLLDPKRIETQSSYRAALDELDALMAEEPDAVAGNRIDELFALIEEYELRRPARVA*
Ga0167658_10062492	3300015195	Glacier Forefield Soil	MPHLLDPKRIDNQTTYLAALDELDALMAEEPDSSAGQRIDELFALIEEYELRQPGSSSLAA*
Ga0167658_10342731	3300015195	Glacier Forefield Soil	MPHLLDPKRIETQSSYRAALDELDALMAEEPDAVAGNRIDELFALIEEYELRRPARVT*
Ga0132258_106230551	3300015371	Arabidopsis Rhizosphere	MPHLLDPKRIDNDSKWLAALDELDALMADEPDAGAERRIDELFALIEEYELRQPGRSPTD
Ga0132258_118259902	3300015371	Arabidopsis Rhizosphere	MPHLLDPSRIDNDSKYLAALDELDALMAEEPDAGAERRIDELFALIEEYELRKPGRSQAG
Ga0132256_1020981371	3300015372	Arabidopsis Rhizosphere	MPHLLDPSRIDNDSKYLAALDELDALMAEEPDAGAERRIDELFALIEEYELRKPARSQAG
Ga0132255_1020589173	3300015374	Arabidopsis Rhizosphere	MPHLFDPKRIDNDSKWLAALDELDALMAEEPDAGAERRIDELFALIEEYELRQPGRSPTD
Ga0182036_103327791	3300016270	Soil	KRIDNETKYIAALEELDALMAGEPDAGAERRIDELFDLIEDYQLQKPSRAARLG
Ga0187773_110044211	3300018064	Tropical Peatland	MPHLLDPKRIDNETKYIAALEELDALMDGEPDAGAERRIDELFDLIEDYQLRRTSRAVHV
Ga0184635_101985862	3300018072	Groundwater Sediment	MAHLLDPKRIDSETKYLAALDELDALMAEEPDACAGRRIDELFALIEDYELRQPLRTR
Ga0184625_101145191	3300018081	Groundwater Sediment	MAHLLDPKRIDSETKYLAALDELDALMAEEPDACAGRRIDELFALIEDYE
Ga0210335_11972753	3300021346	Estuarine	LLDPKRIDTQATYLAALHELDALMDEDADAGANHRIDELFALVEAYELRQSKPVVRDA
Ga0210334_111080381	3300021859	Estuarine	MSHLLDPKRIDTQATYLAALHELDALMDEDADAGANHRIDELFALVEAYELRQSKPVVRD
Ga0224505_101552582	3300022214	Sediment	MPHLLDPKRIDTQATYLAALHELDALMDEDADAGANNRIDELFALVEAYELRQSKPVVRD
Ga0224510_100543201	3300022309	Sediment	PKRIDTQATYLAALHELDALMDEDADAGANHRIDELFALVEAYELRQSKPVVRDA
Ga0207642_111297841	3300025899	Miscanthus Rhizosphere	MPHLLDPSRIDNDSKYLAALDELDALMAEEPDAGAERRIDELFALIEEYELRKPGRAQAG
Ga0207646_105998662	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAHLLDPKRIDSETKYLAALDELDALMAEEPDACAGTRIDELFALIEDYELRQPVRASHA
Ga0207681_106519821	3300025923	Switchgrass Rhizosphere	TFNPIARRPAMPHLFDPNRIDDESKYLAALDELDALMAEEPDAGAERRIDELFALIEEYELRKPGRELA
Ga0207701_101132234	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MPHLFDPNRIDDESKYLAALDELDALMAEEPDAGAERRIDELFALIEEYELRKPLRAAHG
Ga0207701_106538301	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	NRIDDESKYLAALDELDALMAEEPDAGAERRIDELFALIEEYELRKPGRELA
Ga0207686_105073372	3300025934	Miscanthus Rhizosphere	MPHLLDPKRIDTQARYRAALDELDALMAEEPDVSAGHRIDELFALIEEYELRHSMPPTPAAQVVP
Ga0207704_110982342	3300025938	Miscanthus Rhizosphere	MPHLLDPSRIDNDSKYLAALDELDALMAEEPDACAERRIDELFALIEEYELRKPGRAQAG
Ga0207691_116149661	3300025940	Miscanthus Rhizosphere	MPHLFDPNRIYDESKYLAALDELDALMAEEPDAGAERRIDELFALIEEYELRKPGRELA
Ga0210134_10430311	3300025950	Natural And Restored Wetlands	MSHLLDPKRIDTQATYLAALHELDALMDEDADAGANNRIDELFALVEAYELRQSKPVVRD
Ga0209683_104348311	3300027840	Wetland Sediment	MPHLLDPKRIDTQATYLAALHELDALMEEDPDAGANNRIDELFALVEAYELRQPRLGVRE
Ga0209254_100194752	3300027897	Freshwater Lake Sediment	MPHLLDPKRIDTQATYLAALRELDTLMDEDPDAGANNRIDELFALVEAYELRQPRPVPRE
Ga0209254_101574272	3300027897	Freshwater Lake Sediment	MPHLLDPKSIDTQATYLAALHELDTLMDEDPDAGANSRIDELFALVEAYELRQPRRAVRD
Ga0209254_102424662	3300027897	Freshwater Lake Sediment	MPHLLDPRHIDAHAMYLAALHELDALMAEEPDAMASHRIDELFALIEDYELRQLPPASHA
Ga0209254_106335392	3300027897	Freshwater Lake Sediment	MPHLLDPRRIATHATYLAALHELDALMAEDPDASANRRIDELFRLIEAYELQPPEPASRT
Ga0209668_106598801	3300027899	Freshwater Lake Sediment	MPHLLDPKRIDTQATYLAALHELDTLMDEDPDAGANNRIDELFALVEAYELRQPRLTVRE
Ga0209253_1000052432	3300027900	Freshwater Lake Sediment	MPHLLDPRRIDAHATYLAALHELDALMAEEPDSMASHRIDELFALIEDYELRQLPPASRA
Ga0209253_100070978	3300027900	Freshwater Lake Sediment	MPHLFDPKQIDTHATYLAALHELDALMAEDPDAAANRRIDELFALIEEYELRQPAPESRA
Ga0209253_106687192	3300027900	Freshwater Lake Sediment	MPHLLDPKRIDTQATYLAALHELDALMDEDPDAGANNRIDELFALVEAYELRQPRLVVRE
Ga0209048_1000146917	3300027902	Freshwater Lake Sediment	MPHLLDPKSLVSQAMYLAAIDELEALMADEPDASAGHRIDELFALIEDYGLRQPAAARA
Ga0209048_100067299	3300027902	Freshwater Lake Sediment	MPHLLDPRHIDAHATYLAALHELDALMAEEPDAMASHRIDELFALIEDYELRQLPPASHA
Ga0209048_105676641	3300027902	Freshwater Lake Sediment	MPHLLDPKHLSSQASYLAAIGELDALLAEEPDDSAGQRVDELFALIVDYELRRPATPPQP
Ga0209048_106035502	3300027902	Freshwater Lake Sediment	MSHLLDPKRIDTQTSYLAALDELDALMAEEPDACFGHRIDELFALIEEYEMRRPVGGA
Ga0209048_107451583	3300027902	Freshwater Lake Sediment	VPHLLDPKHLSCESSYRAAIEELDTLMGEEPDASAGHRIDELFALIEDYERRQPAARSQP
Ga0209583_105151052	3300027910	Watersheds	MPHLLDPKRIDNQATYLAALDELDALMAEEPDTCAGHRIDELFALIEDYELRRPDVAACN
Ga0209391_101015582	3300027975	Freshwater Sediment	MPHLLDPKRIDTQSTYLAALHELDSLMAEDPDAGANNRIDELFALVEAYELRQPRRVVRE
Ga0268265_117275132	3300028380	Switchgrass Rhizosphere	MPHLFDPNRIDDESKYLAALDELDALMAEEPDAGAERRIDELFALIEEYELRKPKPTP
Ga0268264_110584562	3300028381	Switchgrass Rhizosphere	MPHLFDPNRIDDESKYLAALDELDALMAEEPDAGAERRIDELFALIEEYELRKPGRELA
Ga0302323_1027863072	3300031232	Fen	MPHLLDPKHLSGESSYRAAIAELDALLGEEPDVSAGHRIDELFALIEDYELRQPAASLHP
Ga0318534_100931642	3300031544	Soil	MAHVLDPKRIDNETKYIAALEELDALMAGEPDAGAERRIDELFDLIEDYQLQKPSRAARL
Ga0310915_111319481	3300031573	Soil	MAHVLDPKRIDNETKYIAALEELDALMAGEPDAGAERRIDELFDLIEDYQLQKPSR
Ga0315291_112427041	3300031707	Sediment	MPHLLDPKRIDTQATYLAALHELDTLMDEDPDAGANNRIDELFALVEAYELRQPRPTVRE
Ga0307469_102418762	3300031720	Hardwood Forest Soil	MAHLLDPKRIDTETKYIAALEELDALMAGEPDVGAERRIDELFELIEDYQLRKPSRAAQL
Ga0307469_105059252	3300031720	Hardwood Forest Soil	MANLLDPKRIDNESKYIAALDELDALTGGEPDAGAERRIDELFALIEDYQLRRPSRAAQL
Ga0307469_113016972	3300031720	Hardwood Forest Soil	MAHLLDPKRIDNETRYIAALEELDALMAGEPDAGAERRIDELFELIEDYQLRKPSRATQL
Ga0307468_1004779562	3300031740	Hardwood Forest Soil	MANLLDPKRIDNESKYIAALDELDALMGGEPDAGAERRIDELFALIEDYQLRRPSRAAQL
Ga0318494_108136572	3300031751	Soil	MPHLLDPRRIADESKYLAALDELDALMAEEPDACAERRIDELFALIEEYELRKFGHASQS
Ga0318554_107049571	3300031765	Soil	MAHVLDPKRIDNETKYIAALEELDALMAGEPDAGAERRIDELFDLIEDYQ
Ga0307473_102642992	3300031820	Hardwood Forest Soil	AMANRLDPKRIDNESKYIAALDELDALMGGEPDAGAERRIDELFALIEDYQLRRPSRAAQLG
Ga0315290_100099015	3300031834	Sediment	MPHLLDPKRIDTETNYLAALDELDALLAEEPDTSAGHRIDELFALIEEYEFRRPARATCA
Ga0315290_105440802	3300031834	Sediment	IDTQAMYRAALHELDTLMDEDPDAGANNRIDELFALVEAYELRQPRPTVRET
Ga0315290_106357242	3300031834	Sediment	MPHLLDPKRIDTQATYLAALHELDTLMDEDPDAGANNRIDELFALVEAYELRQARRAVRE
Ga0315290_106416752	3300031834	Sediment	MPHLLDPKRIDTQAMYLAALHELDALMAEDPDAAANSRIDELFALIEEYELRRPTPASHA
Ga0315290_110985132	3300031834	Sediment	MPHLLDPKRIDTQATYRAALHELDTLMDEDPDAGANNRIDELFALVEAYELRQPRP
Ga0315290_112569892	3300031834	Sediment	MPHLLDPNRIDTHATYLAALHELDALMGEDPDAAANRRIDELFALIEGYELRQPGPASR
Ga0315290_116084402	3300031834	Sediment	PNRIDTHATYLTALHELDALMGEDPDAAANRRIDELFALIEGYELRQPGPASRAA
Ga0315297_106910052	3300031873	Sediment	MPHLLDPKRIDTQATYLAALHELDTLMDEDPDAGANNRIDELFALVEAYELRQPRRAVRE
Ga0315278_100663554	3300031997	Sediment	MPHLLDPNRIDTHATYLTALHELDALMGEDPDAAANRRIDELFALIEGYELRQPGPASRA
Ga0315278_102175902	3300031997	Sediment	MPHLLDPKHIDTQAIYLAALDELDALLAEEPDTSAGHRIDELFALIEAYELRQPARATRA
Ga0315278_103260653	3300031997	Sediment	MPHLLDPKRIDTLTIYLAAIDELDALMAEEPDTVSGHRIDELFALIEDYELRQPARASRA
Ga0315278_104672381	3300031997	Sediment	MPHLLDPKRIDTHATYLAALHELDALMAEDPDAAASRRIDELFALIEEYELRQPAPESRA
Ga0315278_110228911	3300031997	Sediment	MPHLLDPKRIDTQATYLAALHELDTLMDEDPDDGANNRIDELFALVEAYELRQPRPALPE
Ga0315278_115044802	3300031997	Sediment	MPHLLDPKRIDTQATYLAALHELDTLMDEDPDAGANNRVDELFALVEAYELRQPRPVPRE
Ga0318556_103913391	3300032043	Soil	MAHVLDPKRIDNETKYIAALEELDALMAGEPDAGAERRIDELFDLIED
Ga0315284_114871621	3300032053	Sediment	MPHLLDPKRIDTQATYLAALHELDTLMDEDPDAGANNRIDELFALVEAYELRQPRPTL
Ga0318518_101412801	3300032090	Soil	AHVLDPKRIDNETKYIAALEELDALMAGEPDAGAERRIDELFDLIEDYQLQKPSRAARLG
Ga0315277_107304892	3300032118	Sediment	MPHLLDPKRIDTEAHYLAALDELDALLVEEPDTSAGHRIDELFALIEEYEFRRPARTIRA
Ga0315277_108098451	3300032118	Sediment	MPHLLDPKRIDTAAHYLAALDELDALLAEEPDTSAGHRIDELFALIEAYEFRPPAPAT
Ga0315295_112502882	3300032156	Sediment	MPHLLDPKRIDTQATYLAALHELDTLMDEDPDAGANNRIDELFALVEAYELRQPRPVPRE
Ga0315281_120650252	3300032163	Sediment	MPHLLDPKRIDTHATYLAALNELDTLMDEDPDAGANNRIDELFALVEAYELRQPRSVLRE
Ga0315283_106575532	3300032164	Sediment	MPHLLDPKRIDTQATYRAALHELDTLMDEDPDAGANNRIDELFALVEAYELRQPRPTVRE
Ga0315283_116447591	3300032164	Sediment	MPHLLDPNRIDTHATYLAALHELDALMGEDPDAAANRRIDELFALIEGYELRQ
Ga0315283_118134681	3300032164	Sediment	MPHLLDPKRIDTQAMYLAALHELDALMAEDPDAAANSRIDELFALIEEYELRRPTAASHV
Ga0315268_109675282	3300032173	Sediment	MPHLLDPKRIDTQATYLAALHELDALMAEDPEDASHNRIDELFALIEEYEFRRPARATCA
Ga0315268_110784301	3300032173	Sediment	MSHQLDPNRIATHATYLAALHELDALMGEDPDAAANRRIDELFALIEEYELRQPRPVSGA
Ga0307470_104085113	3300032174	Hardwood Forest Soil	MANLLDPKRIDNESKYIAALDELDALMAGEPDAGAERRIDELFALIEDYQLRRPSRAAQL
Ga0307470_113909961	3300032174	Hardwood Forest Soil	MAHRLDPKRIDTETKYIAALEELDALMAGEPDVGAERRIDELFELIEDYQLRKPSRAAQL
Ga0315276_105575212	3300032177	Sediment	MPHLLDPNRIDTHATYLAALHELDALMGEDPDAAANRRIDELFALIEGYELRQPGPASRA
Ga0315276_117973941	3300032177	Sediment	MPHLLDPKRIDTQAMYRAALHELDTLMDEDPDAGANNRIDELFALVEAYELRQPRPTVRE
Ga0315276_118320811	3300032177	Sediment	MPHLLDPKRIDTQATYLAALHELDTLMDEDPDAGANNRIDELFALVEAYELRQPRPTLRE
Ga0307471_1032499722	3300032180	Hardwood Forest Soil	MAHLLDPKRIDTETKYLAALDELDALMAEEPDACAGTRIDELFALIEEYELRQPVRASPT
Ga0315271_100085963	3300032256	Sediment	MSHLLDPNRIATHATYLAALHELDALMGEDPDAAANRRIDELFALIEEYELRQPRPVSGA
Ga0315271_100107141	3300032256	Sediment	MSHLLDPKRIDTQAAYLAALHELDALMAEDPEAASHNRIDELFALIEEYELRRPEPASHA
Ga0315271_100949433	3300032256	Sediment	MPHLLDPKRIDTQATYLAALHELDTLMDEELDAGANNRIDELFALVEAYELRQPRPVPRE
Ga0315271_103774342	3300032256	Sediment	MPHLLDPKRIDTRAAYLAALHELDALMAEDPEAASHNRIDELFALIEEYELRRPEPASRA
Ga0315287_113499982	3300032397	Sediment	IDTHATYLAALHELDALMAEDPDAAASRRIDELFALIEEYELRQPAPESRAA
Ga0315287_114872682	3300032397	Sediment	MPHLLDPKRIDTQATYLAALHELDTLMDEDPDAGANNRIDELFALVEAYELRQPRPALRE
Ga0315287_118023712	3300032397	Sediment	MPHLLDPKRIDTQATYLAALHELDTLMDEDPDAGANNRIDELFALVEAYELRQPRRVVRE
Ga0315275_104258252	3300032401	Sediment	MPHLLDPNRIDTHATYLTALHELDALMGEDPDAAANRRIDELFALIEGYEL
Ga0315275_116469782	3300032401	Sediment	DPKRIDTQATYRAALHELDTLMDEDPDAGANNRIDELFALVEAYELRQPRPTVRET
Ga0315273_104592592	3300032516	Sediment	MPHLLDPKRIDTAAHYLAALDELDALLAEEPDTSAGHRIDELFALIEAYELRQPAQATHA
Ga0315273_108391593	3300032516	Sediment	MPHLLDPKRIDTHITYLAALCELDALMAEDPDAAANTRIDELFALIEEYEFRQPAPASRA
Ga0315273_110295121	3300032516	Sediment	RTPPLTALHELDALMGEDPDAAANRRIDELFALIEGYELRQPGPASRAA
Ga0315273_118070602	3300032516	Sediment	TDTEEAFMPHLLDPKRIDTQATYLAALRELDALMDEDPDAGANNRIDELFALVEAYELRQPRRAVREA
Ga0315273_131248722	3300032516	Sediment	MPHLLDPKRIDTQATYLAALRELDTLMDEDPDAGANNRIDELFALVEAYELRQPRRAV
Ga0315273_131924852	3300032516	Sediment	MPHLLDPKRIDTQATYLAALHELDTLMDEDPDAGANNRIDELFALVEAYELRQPRPVVRD
Ga0335085_106833031	3300032770	Soil	MPHLLDPKRIDNETKYIAALEELDALMDGEPDAGAERRIDELFDLIEDYQLRRTSRAVHI
Ga0335082_105525852	3300032782	Soil	MPHLLDPKRIDNETKYIAALEELDALMADEPDAGAERRIDELFDLIEDYQLRRPSRAAQL
Ga0335070_104201063	3300032829	Soil	LDPKRIDNETKYIAALEELDALMADEPDAGAERRIDELFDLIEDYQLRRPSRAAQLG
Ga0335084_106297712	3300033004	Soil	MPHLLDPKRIDSETKYIAALEELDALMDGEPDAGAERRIDELFDLIEDYQLRKPSRVARP
Ga0316619_116908312	3300033414	Soil	MPHLLDPRRIDAHATYLAALHELDALMAEEPDATASRRIDELFALIEDYEMRQDAPDSRA
Ga0316622_1025088611	3300033416	Soil	MPHLLDPRRIDTHETYLAALRELDALMAEDPDAAANRRIDELFALIEAYEMRAPEPA
Ga0316625_1022363852	3300033418	Soil	MPHLLDPRRIDAHATYLAALHELDALMAEEPDAMASRRIDELFALIEDYEMRQDAPDSRV
Ga0326726_106546891	3300033433	Peat Soil	PHLLDPKRMDTQTKYLAALDELDALMTEEPDACAGHRIDELFALIEDYEMRQPMCGSQAA
Ga0316627_1005155912	3300033482	Soil	MPHLLDPRRIDTHETYLAALRELDALMAEDPDAAANRRIDELFALIEAYEMRAPEPASRP
Ga0314862_0085948_272_457	3300033803	Peatland	MPHLLDPKRIDNESKYIAALEELDALMADEPDAGAERRIDELFDLIEDYQLRRPSRAAQL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F045171

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences