Metagenome / Metatranscriptome Family F044818

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044818
Family Type	Metagenome / Metatranscriptome
Number of Sequences	154
Average Sequence Length	68 residues
Representative Sequence	MKENEILEEIHRIRAEHAAECGYDVNVMFARMDAELERLKAEGWQVVSPAPREKETAYSLREEPPKPK
Number of Associated Samples	98
Number of Associated Scaffolds	150

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	51.95 %
% of genes near scaffold ends (potentially truncated)	12.99 %
% of genes from short scaffolds (< 2000 bps)	77.92 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.753 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment (31.818 % of family members)
Environment Ontology (ENVO)	Unclassified (35.714 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (36.364 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.54% β-sheet: 0.00% Coil/Unstructured: 61.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 150 Family Scaffolds
PF01850	PIN	5.33
PF13711	DUF4160	2.00
PF10047	DUF2281	2.00
PF04365	BrnT_toxin	1.33
PF04255	DUF433	1.33
PF04383	KilA-N	1.33
PF12770	CHAT	1.33
PF13360	PQQ_2	1.33
PF13734	Inhibitor_I69	1.33
PF00348	polyprenyl_synt	1.33
PF10543	ORF6N	0.67
PF01420	Methylase_S	0.67
PF01555	N6_N4_Mtase	0.67
PF00873	ACR_tran	0.67
PF00795	CN_hydrolase	0.67
PF02669	KdpC	0.67
PF01734	Patatin	0.67
PF04055	Radical_SAM	0.67
PF00034	Cytochrom_C	0.67
PF01041	DegT_DnrJ_EryC1	0.67
PF13620	CarboxypepD_reg	0.67
PF09479	Flg_new	0.67
PF13385	Laminin_G_3	0.67
PF01765	RRF	0.67
PF01784	NIF3	0.67
PF13650	Asp_protease_2	0.67
PF02452	PemK_toxin	0.67
PF02595	Gly_kinase	0.67
PF00374	NiFeSe_Hases	0.67
PF00082	Peptidase_S8	0.67
PF04221	RelB	0.67
PF13927	Ig_3	0.67
PF00069	Pkinase	0.67
PF13676	TIR_2	0.67
PF07927	HicA_toxin	0.67
PF03200	Glyco_hydro_63	0.67
PF07394	DUF1501	0.67

COG ID	Name	Functional Category	% Frequency in 150 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.67
COG0142	Geranylgeranyl pyrophosphate synthase	Coenzyme transport and metabolism [H]	1.33
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	1.33
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	1.33
COG0233	Ribosome recycling factor	Translation, ribosomal structure and biogenesis [J]	0.67
COG0327	Putative GTP cyclohydrolase 1 type 2, NIF3 family	Coenzyme transport and metabolism [H]	0.67
COG0374	Ni,Fe-hydrogenase I large subunit	Energy production and conversion [C]	0.67
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.67
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.67
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.67
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.67
COG0732	Restriction endonuclease S subunit	Defense mechanisms [V]	0.67
COG0863	DNA modification methylase	Replication, recombination and repair [L]	0.67
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	0.67
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.67
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.67
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.67
COG1929	Glycerate kinase	Carbohydrate transport and metabolism [G]	0.67
COG2156	K+-transporting ATPase, KdpC subunit	Inorganic ion transport and metabolism [P]	0.67
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	0.67
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.67
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.67
COG3077	Antitoxin component of the RelBE or YafQ-DinJ toxin-antitoxin module	Defense mechanisms [V]	0.67
COG3259	Coenzyme F420-reducing hydrogenase, alpha subunit	Energy production and conversion [C]	0.67
COG3323	PII-like insert in the uncharacterized protein YqfO, YbgI/NIF3 family	Function unknown [S]	0.67
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.67
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.67

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.75 %
Unclassified	root	N/A	3.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.75 %
Unclassified	root	N/A	3.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.75 %
Unclassified	root	N/A	3.25 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	66.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.79 %
Unclassified	root	N/A	3.25 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.65 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.65 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	63.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.79 %
Unclassified	root	N/A	3.25 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	1.30 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.65 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.65 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.79 %
Unclassified	root	N/A	3.25 %
unclassified Lentisphaerota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota	1.30 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.30 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.65 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.65 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.65 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.79 %
Unclassified	root	N/A	3.25 %
Lentisphaerae bacterium RIFOXYA12_FULL_48_11	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium RIFOXYA12_FULL_48_11	1.30 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.30 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.65 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.65 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.65 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.79 %
Unclassified	root	N/A	3.25 %
Lentisphaerae bacterium RIFOXYA12_FULL_48_11	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium RIFOXYA12_FULL_48_11	1.30 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.30 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.65 %
unclassified Anaerolineales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales	0.65 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.65 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.79 %
Unclassified	root	N/A	3.25 %
Lentisphaerae bacterium RIFOXYA12_FULL_48_11	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium RIFOXYA12_FULL_48_11	1.30 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.30 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	0.65 %
Granulicella pectinivorans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella pectinivorans	0.65 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.79 %
Unclassified	root	N/A	3.25 %
Lentisphaerae bacterium RIFOXYA12_FULL_48_11	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium RIFOXYA12_FULL_48_11	1.30 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.30 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.65 %
Granulicella pectinivorans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella pectinivorans	0.65 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908032\|Perma_A_C_ConsensusfromContig168112	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
2124908035\|B3_GZOS_CLC_ConsensusfromContig72091	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1062	Open in IMG/M
2140918008\|ConsensusfromContig148350	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1188	Open in IMG/M
3300000553\|TBL_comb47_HYPODRAFT_10108415	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1337	Open in IMG/M
3300001213\|JGIcombinedJ13530_106371895	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	625	Open in IMG/M
3300001380\|JGI1356J14229_10047132	All Organisms → cellular organisms → Bacteria	2220	Open in IMG/M
3300002183\|JGI24145J26757_10046286	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300002231\|KVRMV2_101858581	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300004775\|Ga0007798_10046515	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300005343\|Ga0070687_100248716	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300005827\|Ga0074478_1934928	All Organisms → cellular organisms → Bacteria	1649	Open in IMG/M
3300006102\|Ga0075015_100592186	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300006638\|Ga0075522_10521399	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300006797\|Ga0066659_11330784	All Organisms → cellular organisms → Bacteria → Proteobacteria	599	Open in IMG/M
3300009009\|Ga0105105_10899715	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	542	Open in IMG/M
3300009029\|Ga0066793_10441384	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	746	Open in IMG/M
3300009039\|Ga0105152_10041193	All Organisms → cellular organisms → Bacteria	1840	Open in IMG/M
3300009078\|Ga0105106_11008680	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	591	Open in IMG/M
3300009167\|Ga0113563_13680380	Not Available	519	Open in IMG/M
3300009175\|Ga0073936_10100325	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2364	Open in IMG/M
3300009175\|Ga0073936_10668585	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	582	Open in IMG/M
3300009175\|Ga0073936_10789344	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	516	Open in IMG/M
3300009502\|Ga0114951_10043529	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium RIFOXYA12_FULL_48_11	2758	Open in IMG/M
3300009502\|Ga0114951_10586675	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	536	Open in IMG/M
3300009518\|Ga0116128_1213404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	540	Open in IMG/M
3300009618\|Ga0116127_1095590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	785	Open in IMG/M
3300009637\|Ga0116118_1120591	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	867	Open in IMG/M
3300009639\|Ga0116122_1131733	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	801	Open in IMG/M
3300009640\|Ga0116126_1077790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1223	Open in IMG/M
3300009646\|Ga0116132_1213116	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	586	Open in IMG/M
3300009868\|Ga0130016_10010632	All Organisms → cellular organisms → Bacteria	14892	Open in IMG/M
3300010339\|Ga0074046_10166915	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1397	Open in IMG/M
3300010341\|Ga0074045_10352562	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	959	Open in IMG/M
3300010343\|Ga0074044_10042435	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3151	Open in IMG/M
3300011997\|Ga0120162_1001184	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	13320	Open in IMG/M
3300012360\|Ga0137375_11331863	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	540	Open in IMG/M
3300012411\|Ga0153880_1318215	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	716	Open in IMG/M
3300013092\|Ga0163199_1067968	All Organisms → cellular organisms → Bacteria → Proteobacteria	1561	Open in IMG/M
3300013092\|Ga0163199_1339485	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	563	Open in IMG/M
(restricted) 3300013138\|Ga0172371_10529805	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300014490\|Ga0182010_10051310	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1967	Open in IMG/M
3300014491\|Ga0182014_10050170	All Organisms → cellular organisms → Bacteria → Proteobacteria	2887	Open in IMG/M
3300014494\|Ga0182017_10240568	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1146	Open in IMG/M
3300014496\|Ga0182011_10412456	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	879	Open in IMG/M
3300014498\|Ga0182019_10094476	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1820	Open in IMG/M
3300014498\|Ga0182019_10667762	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	734	Open in IMG/M
3300014502\|Ga0182021_10378576	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1676	Open in IMG/M
3300014839\|Ga0182027_10069988	All Organisms → cellular organisms → Bacteria	4314	Open in IMG/M
3300014839\|Ga0182027_10177011	All Organisms → cellular organisms → Bacteria → Proteobacteria	2492	Open in IMG/M
3300014839\|Ga0182027_10369998	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella pectinivorans	1601	Open in IMG/M
3300014839\|Ga0182027_10635952	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1141	Open in IMG/M
3300014839\|Ga0182027_11283751	Not Available	731	Open in IMG/M
3300014839\|Ga0182027_12025882	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	551	Open in IMG/M
3300015360\|Ga0163144_10207839	All Organisms → cellular organisms → Bacteria	2703	Open in IMG/M
3300017935\|Ga0187848_10041340	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2264	Open in IMG/M
3300018008\|Ga0187888_1249635	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	691	Open in IMG/M
3300018008\|Ga0187888_1322314	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	591	Open in IMG/M
3300018008\|Ga0187888_1369680	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	544	Open in IMG/M
3300020158\|Ga0194038_1008732	All Organisms → cellular organisms → Bacteria	3744	Open in IMG/M
3300020158\|Ga0194038_1010924	All Organisms → cellular organisms → Bacteria	3270	Open in IMG/M
3300020158\|Ga0194038_1028799	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1806	Open in IMG/M
3300020228\|Ga0194040_1077577	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	965	Open in IMG/M
3300021064\|Ga0206225_1009670	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1575	Open in IMG/M
3300021064\|Ga0206225_1133782	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	541	Open in IMG/M
3300021069\|Ga0194062_1158764	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	660	Open in IMG/M
3300021070\|Ga0194056_10073868	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1252	Open in IMG/M
3300021070\|Ga0194056_10106293	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1011	Open in IMG/M
3300021072\|Ga0194057_10167048	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	782	Open in IMG/M
3300021349\|Ga0194052_1001739	All Organisms → cellular organisms → Bacteria → PVC group	12341	Open in IMG/M
3300021520\|Ga0194053_10003961	All Organisms → cellular organisms → Bacteria	8296	Open in IMG/M
3300021602\|Ga0194060_10100886	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1589	Open in IMG/M
3300022524\|Ga0224534_1004109	All Organisms → cellular organisms → Bacteria	5868	Open in IMG/M
3300022553\|Ga0212124_10377587	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	746	Open in IMG/M
3300022555\|Ga0212088_10052881	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	4320	Open in IMG/M
3300022555\|Ga0212088_10107512	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerae bacterium RIFOXYA12_FULL_48_11	2528	Open in IMG/M
3300022556\|Ga0212121_10253982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	1211	Open in IMG/M
3300022556\|Ga0212121_10358384	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	967	Open in IMG/M
3300022593\|Ga0236338_1119073	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	542	Open in IMG/M
3300023088\|Ga0224555_1021027	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3126	Open in IMG/M
3300025162\|Ga0209083_1324430	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	542	Open in IMG/M
3300025324\|Ga0209640_11424599	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	504	Open in IMG/M
3300025499\|Ga0207931_1012409	Not Available	2035	Open in IMG/M
3300025533\|Ga0208584_1071096	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	868	Open in IMG/M
3300025716\|Ga0209746_1089953	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	947	Open in IMG/M
3300025865\|Ga0209226_10035734	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2241	Open in IMG/M
3300025865\|Ga0209226_10232990	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300025888\|Ga0209540_10510891	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	629	Open in IMG/M
3300025918\|Ga0207662_10217814	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1242	Open in IMG/M
3300026456\|Ga0255351_1016110	All Organisms → cellular organisms → Bacteria	1964	Open in IMG/M
3300027815\|Ga0209726_10043822	All Organisms → cellular organisms → Bacteria → Proteobacteria	3222	Open in IMG/M
3300027819\|Ga0209514_10002701	All Organisms → cellular organisms → Bacteria	26887	Open in IMG/M
3300027896\|Ga0209777_10144937	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1964	Open in IMG/M
3300027896\|Ga0209777_10144937	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1964	Open in IMG/M
3300027896\|Ga0209777_10628735	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	773	Open in IMG/M
3300028283\|Ga0268283_1042726	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1431	Open in IMG/M
3300028653\|Ga0265323_10007796	All Organisms → cellular organisms → Bacteria	4429	Open in IMG/M
3300029913\|Ga0311362_10859788	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	737	Open in IMG/M
3300029955\|Ga0311342_10946407	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	645	Open in IMG/M
3300031670\|Ga0307374_10535281	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	617	Open in IMG/M
3300031834\|Ga0315290_11320787	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300031873\|Ga0315297_10846113	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	762	Open in IMG/M
3300031873\|Ga0315297_10857574	All Organisms → cellular organisms → Bacteria → PVC group	756	Open in IMG/M
3300031873\|Ga0315297_11279491	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	599	Open in IMG/M
3300031997\|Ga0315278_10172837	All Organisms → cellular organisms → Bacteria → Proteobacteria	2216	Open in IMG/M
3300031997\|Ga0315278_11288522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	713	Open in IMG/M
3300031997\|Ga0315278_11483108	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	653	Open in IMG/M
3300031997\|Ga0315278_11677055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	605	Open in IMG/M
3300031999\|Ga0315274_10036775	All Organisms → cellular organisms → Bacteria	6714	Open in IMG/M
3300031999\|Ga0315274_10036775	All Organisms → cellular organisms → Bacteria	6714	Open in IMG/M
3300031999\|Ga0315274_10114247	All Organisms → cellular organisms → Bacteria	3485	Open in IMG/M
3300031999\|Ga0315274_10241817	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2201	Open in IMG/M
3300031999\|Ga0315274_10539427	All Organisms → cellular organisms → Bacteria → PVC group	1307	Open in IMG/M
3300031999\|Ga0315274_11314524	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	704	Open in IMG/M
3300032070\|Ga0315279_10270363	All Organisms → cellular organisms → Bacteria → Proteobacteria	1256	Open in IMG/M
3300032070\|Ga0315279_10401320	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	941	Open in IMG/M
3300032143\|Ga0315292_10822030	Not Available	778	Open in IMG/M
3300032143\|Ga0315292_10998285	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	695	Open in IMG/M
3300032156\|Ga0315295_10772539	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	966	Open in IMG/M
3300032156\|Ga0315295_11098497	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	785	Open in IMG/M
3300032156\|Ga0315295_11250299	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	726	Open in IMG/M
3300032164\|Ga0315283_10209419	All Organisms → cellular organisms → Bacteria	2101	Open in IMG/M
3300032164\|Ga0315283_11065817	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	852	Open in IMG/M
3300032164\|Ga0315283_11184470	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	799	Open in IMG/M
3300032164\|Ga0315283_11641792	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	653	Open in IMG/M
3300032164\|Ga0315283_12136500	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	553	Open in IMG/M
3300032177\|Ga0315276_11957502	All Organisms → cellular organisms → Bacteria → Proteobacteria	599	Open in IMG/M
3300032177\|Ga0315276_12363621	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300032256\|Ga0315271_10055614	All Organisms → cellular organisms → Bacteria	2878	Open in IMG/M
3300032256\|Ga0315271_10217909	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1536	Open in IMG/M
3300032256\|Ga0315271_10217909	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1536	Open in IMG/M
3300032256\|Ga0315271_11519711	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	577	Open in IMG/M
3300032275\|Ga0315270_10037716	All Organisms → cellular organisms → Bacteria	2682	Open in IMG/M
3300032275\|Ga0315270_10805143	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	618	Open in IMG/M
3300032342\|Ga0315286_10031324	All Organisms → cellular organisms → Bacteria → Proteobacteria	5541	Open in IMG/M
3300032342\|Ga0315286_10031324	All Organisms → cellular organisms → Bacteria → Proteobacteria	5541	Open in IMG/M
3300032397\|Ga0315287_10385849	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300032397\|Ga0315287_10641327	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1257	Open in IMG/M
3300032397\|Ga0315287_10758787	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300032397\|Ga0315287_10796843	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1111	Open in IMG/M
3300032397\|Ga0315287_12606812	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300032401\|Ga0315275_11323420	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	780	Open in IMG/M
3300032401\|Ga0315275_11476670	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	731	Open in IMG/M
3300032401\|Ga0315275_11670090	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	680	Open in IMG/M
3300032401\|Ga0315275_11827778	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	644	Open in IMG/M
3300032401\|Ga0315275_12377836	All Organisms → cellular organisms → Bacteria → Proteobacteria	551	Open in IMG/M
3300032401\|Ga0315275_12597401	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	522	Open in IMG/M
3300032516\|Ga0315273_10560858	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1521	Open in IMG/M
3300032516\|Ga0315273_12696489	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300032805\|Ga0335078_10978452	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1005	Open in IMG/M
3300032805\|Ga0335078_11533124	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	743	Open in IMG/M
3300033405\|Ga0326727_10630401	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	882	Open in IMG/M
3300033521\|Ga0316616_102986526	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	637	Open in IMG/M
3300033557\|Ga0316617_102725062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	515	Open in IMG/M
3300034282\|Ga0370492_0396825	Not Available	559	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.70%
Host-Associated	Host-Associated	0.65%
Engineered	Engineered	0.65%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	67.53%
Terrestrial	Environmental → Terrestrial	31.17%
Plants	Host-Associated → Plants	0.65%
Wastewater	Engineered → Wastewater	0.65%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	64.29%
Soil	Environmental → Terrestrial → Soil	25.97%
Peat	Environmental → Terrestrial → Peat	3.90%
Marine	Environmental → Aquatic → Marine	1.30%
Sediment	Environmental → Aquatic → Sediment	1.30%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.30%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.65%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.65%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	50.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	9.09%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.14%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.90%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.25%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.95%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.95%
Loam	Environmental → Terrestrial → Soil → Loam	1.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.30%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.30%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.65%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.65%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.65%
Clay	Environmental → Terrestrial → Soil → Clay	0.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.65%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	32.47%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	17.53%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	9.09%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	7.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.19%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.55%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.95%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.95%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	1.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.30%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.30%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.65%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.65%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.65%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	0.65%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.65%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.65%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	31.82%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	7.79%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	7.14%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	5.19%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.90%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	3.25%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.60%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	2.60%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.95%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.95%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	1.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.95%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.95%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.95%
Anoxic Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water	1.30%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.30%
Deep Subsurface Sediment	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment	1.30%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.30%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.65%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.65%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.65%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	0.65%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.65%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.65%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	0.65%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.65%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.65%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.65%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.65%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.65%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.65%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.65%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
2124908035	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog Site B3	Environmental	Open in IMG/M
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300000553	Trout Bog Lake May 28 2007 Hypolimnion (Trout Bog Lake Combined Assembly 47 Hypolimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001380	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m	Environmental	Open in IMG/M
3300002183	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A	Environmental	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300004775	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA17M	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005827	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.188_CBA	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009039	Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009646	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150	Environmental	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300011997	Permafrost microbial communities from Nunavut, Canada - A15_80cm_18M	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012411	Freshwater microbial communities from Lake Alinen Mustaj?rvi, Finland - AM7a metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013092	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_150m	Environmental	Open in IMG/M
3300013138 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_12m	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300020158	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-6m	Environmental	Open in IMG/M
3300020228	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-10m	Environmental	Open in IMG/M
3300021064	Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos B2	Environmental	Open in IMG/M
3300021069	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L224-25m	Environmental	Open in IMG/M
3300021070	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-13m	Environmental	Open in IMG/M
3300021072	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-15m	Environmental	Open in IMG/M
3300021349	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-6m	Environmental	Open in IMG/M
3300021520	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-8m	Environmental	Open in IMG/M
3300021602	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L222-5m	Environmental	Open in IMG/M
3300022524	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E1 20-24	Environmental	Open in IMG/M
3300022553	Powell_combined assembly	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300022556	Kivu_combined assembly	Environmental	Open in IMG/M
3300022593	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W2	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300025162	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG (SPAdes)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025499	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025533	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025716	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-211 (SPAdes)	Environmental	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026456	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r2	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027819	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300028283	Saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2013_06_06_36m	Environmental	Open in IMG/M
3300028653	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG	Host-Associated	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032070	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Perma_A_C_00068240	2124908032	Soil	RAEHAAECGYDVNVMFARMDAELERLKAEGWQVVSPAPREKETAYALREEPPKKK
B3_GZOS_CLC_02165750	2124908035	Soil	MKENEILEEIHRIRAEHAAECGYDVNVLFAQMDAGLKRLQAEGWRVVSPVPREKETACSLREEPPKKK
Bog_all_C_01943610	2140918008	Soil	MKENEILEEIHRIRAEHAAECGYDVNVLFARMDAGLKRLQAEGWRVVSPAPREKETACSLREEPPKKK
TBL_comb47_HYPODRAFT_101084151	3300000553	Freshwater	MKENEILAEIHRVREEIARECGYDVKEIFRRMRAQTEQLKAEGWQVVSPAPREKETACSLREEPPQKKEKLPRHP
JGIcombinedJ13530_1063718952	3300001213	Wetland	MKYNEILDEIYRIREEHARECGYDIHKMFEQLREDTERLKAEGWQVVSPALREKETADSLREEPPKPK*
JGI1356J14229_100471322	3300001380	Groundwater	MKENEILSEIHLVREEIARESGYDVKEIFRRMRAQTEQLKAQGWRVVSLEPRERPDAAYALHDKSADKPK*
JGI24145J26757_100462862	3300002183	Arctic Peat Soil	MKENEILEEIHRIRAEHAAECGYDVNVMFARMDADLKRLQAEGWQVVSPAPRKKETAYSLREEPPPKK*
KVRMV2_1018585812	3300002231	Marine Sediment	MKYNEILEEIYRIREEHARECGYDIHRIFEQLREDTERLQAQGWQVVSPAPREKETADSLREEPPKQK*
Ga0007798_100465151	3300004775	Freshwater	MKENEILSEIHRIREDIARECGYDVKEIFRRMRVQTEQLKAEGWQVVSPAPREKETACSLREEPPKQQ*
Ga0070687_1002487162	3300005343	Switchgrass Rhizosphere	MKENEILSEIHRVREEIARECGYDIHKMFDQIRERTEKLKAEGWEIVSPPPRETEAPLLLRDEPPKK*
Ga0074478_19349282	3300005827	Sediment (Intertidal)	MKENEILSEIHRVREEIARECGYDVKEIFRRMRAQTEQLKAQGWKVVSPAPREKDTAYALREGTPKPK*
Ga0075015_1005921862	3300006102	Watersheds	MKENEILEEIHRLRAEHAAACGYDVKRMLAGMDAELEHLRAQGWAVVSLAPREPETAALLREEPPKP*
Ga0075522_105213992	3300006638	Arctic Peat Soil	MKENEILSEIHRVREEIARECDYDVKEIFRRMRAQTEQLKAQGWRVVSPAPREPETAYALREEPPRQKP*
Ga0066659_113307842	3300006797	Soil	MKENEILSDIHRVREDYARECGYDVNEIFRRMRERTEKLKAEGWKIISPEPRETAETSDALHEKPAKYPGKK*
Ga0105105_108997153	3300009009	Freshwater Sediment	MKENEILSEIHRVREEIARECGYDMGKIFARMRERTEQLKAEGCQVVSPAPREPQPAHAPREEPPTL*
Ga0066793_104413843	3300009029	Prmafrost Soil	MKENDILSEIHRVREEIARECGYDVKEIFRRMRARTEQLKAEGWQVVSPAPREKETACSLREEPPKQK*
Ga0105152_100411932	3300009039	Lake Sediment	MKYNEILEEIYRVREEHARECGYNVDTLFARMREDLERLKAEGWQVVYPAPREVENACVLREEPPHQPETP*
Ga0105106_110086802	3300009078	Freshwater Sediment	MKENEILSEIHRVREEIARECGYDMGKIFARMRERTEQLKAEGWQVVSPAPREVEAAGALREEPPKPGKS*
Ga0113563_136803801	3300009167	Freshwater Wetlands	HRVREEIARECDYDVHKLFERMRQRTEKLKAEGWQVVYPEPRQSQAAGALHEQTPGKSESPGEKRP*
Ga0073936_101003253	3300009175	Freshwater Lake Hypolimnion	MKENEILEEIHRIRAGHAAECGYDVNVLFARMDAELERLKAQGWRVVSPAPREPETAYALHEEPPKQ*
Ga0073936_106685851	3300009175	Freshwater Lake Hypolimnion	MKENEILAEIHRVREEIARECGYDVKEIFRRMRAQTEQLKAEGWQVVSPAPREKETACSLREEPPQKKEKLP*
Ga0073936_107893441	3300009175	Freshwater Lake Hypolimnion	MKYNEILDQIYRIREEHARECGYDIHKMFEQLRENTERLKAEGWQVVSPVPREEETACSLREEPPQQK*
Ga0114951_100435291	3300009502	Freshwater	MRDNEILSEIHRVREDIARECGYNMGEIFARMRERTERFRTNGGKIAAPAPREPDPACALREEPPKA*
Ga0114951_105866752	3300009502	Freshwater	MKENEILAEIHCVREEIARECGYDVKVIFRRMRAQTEQLKAQGWSVVSPAPREPQTAYALREEPLKQIPQP*
Ga0116128_12134042	3300009518	Peatland	MKENEIPEEIHRIRAEHAAECGYDVNVLFARMDADLKRLQAEGWQVVSPAPRENETACSLREEPPKPKPQP*
Ga0116127_10955902	3300009618	Peatland	MKENEILEEIHRIRAEHAAECGYDVNVLFARMDADLKRLQAEGWQVVSPAPRENETACSLREEPPKPKPQP*
Ga0116118_11205911	3300009637	Peatland	MKENEILEEIHRIRAEHAAECGYDVNVLFARMGADLKRLQAEGWQVISPAPREKETACSLREEPSKQKQQP*
Ga0116122_11317333	3300009639	Peatland	MKENEILEEIHRIRAEHAAECGYDVNVLFARMDADLKRLQAEVWQVVSPAPRENETACSLREEPPKPKPQP*
Ga0116126_10777902	3300009640	Peatland	MKENEILEEIHRIRAEHAAECGYDVNVLFARMDADLKRLQAEGWQVISPAPREKETACSLREEPSKQKQQP*
Ga0116132_12131162	3300009646	Peatland	MKENEILEEIHRIRAEHAAECGYDVNVLFARMGADLKRLQAEGWQVVSPAPRQNETACSLREEPPKQKQQP*
Ga0130016_100106327	3300009868	Wastewater	MKENEILSEIHRVREEIARECGYDVKELFRRMRAQTEQLKAEGWQVVSPAPREKETADSLREEPPKPE*
Ga0074046_101669153	3300010339	Bog Forest Soil	MKENEILEEIHRIRAGHAAECGYDVNVLFARMDADLKRLQAEGWQVVSPAPRENETACSLREEPPKQKQQP*
Ga0074045_103525622	3300010341	Bog Forest Soil	MKENEILEEIHRIRAEHAAECGYDVNVLFARMDADLKRLQAEGWQVVSPAPRENETACSLREEPPKQKQQP*
Ga0074044_100424356	3300010343	Bog Forest Soil	MKENEILEEIHRIRAEHAAECGYDVNVLFARMDADLKRLQAEGWQVVSPAPRENETACSLREEPPKQK*
Ga0120162_10011845	3300011997	Permafrost	MKENEILSEIHRVREEIARECGYDVKEIFRRMRAQTEQLKAQGWSVVSPAPRESETAYALREEPSKQKPQP*
Ga0137375_113318632	3300012360	Vadose Zone Soil	MKENEILEEIHRIRAEHAAECGYDVKVMLARMDAELERLKAEGWQVVSPAPREKETAYSLREEPPKQK*
Ga0153880_13182151	3300012411	Freshwater Sediment	MRDNEILSEIHRVREDIARECGYDMGEIFARMRERTERFRTNGGKIAAPAPREPEPAGALREEPPKA*
Ga0163199_10679682	3300013092	Freshwater	MKYNEILEEIYRVREEHARECGYDVDTLFARMRQDLERLKAEGWQVVYPTPREVENACVLHEEPPHQPETP*
Ga0163199_13394851	3300013092	Freshwater	MKENEILEEIHRIRAAHAAECSYDVNVMFARMDAELERLKAEGWQVVSPAPREMETACALREEPPQPK*
(restricted) Ga0172371_105298052	3300013138	Freshwater	MKYNEILDEIYRLREEHARECGYDIHKMFEQLREGTERLKAEGWQVVSPAPRQKETADALREEPPKPK*
Ga0182010_100513103	3300014490	Fen	MQTNEILDEIYRVREEHARECGYNVDTMFARMRENLESLKAEGWQVVSPSPRETENSCALREEPPKK*
Ga0182014_100501706	3300014491	Bog	MKENEILEEIHRIRAEHAAQCGYDVNVLFARMDADLKRLQAEGWQVVSPTPRENETACSLREEPPKPKPQP*
Ga0182017_102405683	3300014494	Fen	MQTNEILDEIYRVREEHARECGYNVDTMFARMRENLERLKAEGWQVVSPSPRETENSCALREEPPKK*
Ga0182011_104124562	3300014496	Fen	MKENEILEEIHRIRAEHAAECGYDVNVLFARMGADLKRFQAEGWQVVSPAPRQNETACSLREEPPKQKQQP*
Ga0182019_100944764	3300014498	Fen	MKENEILSEIHRVREEIARECGYDVKELFRRMRAQTEQLKAQGWQVVSPAPREKETAYSLREEPPQKKEKRP*
Ga0182019_106677622	3300014498	Fen	MKENEILEEIHRIRAEHAAECGYDVNVLFARMDADLKRLQAEGWQVVSPAPRENETTCSLREEPPKQKQQP*
Ga0182021_103785762	3300014502	Fen	MKYNEILDEIYRIREERARECGYDIHKMFEQLREDTERLKAEGWQVVSPAPREKETACSLREEPPQEKEKLV*
Ga0182027_100699883	3300014839	Fen	MKENEILEEIHRIRAEHAAECGYDVNVMFAQMDADLKRLQAEGWQVVSPAPREKETAYSLREEPPKKK*
Ga0182027_101770117	3300014839	Fen	MKENEILEEIHRIRAEHAAECGYDVNVLFARMKEHLKELEAQGWRVVSPAPREKETACSLREEPPKPKPQP*
Ga0182027_103699982	3300014839	Fen	MKENEILSEIHRVREEIARECGQDVKEIFRRMRAKTEQLQAEGWQVVSPAPREKETAGALREEPPKQKQGQQP*
Ga0182027_106359522	3300014839	Fen	MKYNEILDEIYRLREEHARECGYDIHKMFEQLREDTERLKAEGWQVVSPAPREKETACSLREEPPQEKEKLV*
Ga0182027_112837513	3300014839	Fen	EEIHRIRAEHAAECGYDVNVMFAQMDADLKRLQAEGWQVVSPAPREKEIACSLREEPPKQK*
Ga0182027_120258822	3300014839	Fen	MKENEILDEIHRIRAEHAAECGYDVNVMFAQMDADLKRLQAEGWQVVSPAPREKETAGALREEPPKQK*
Ga0163144_102078391	3300015360	Freshwater Microbial Mat	MKTNEILEDLYRVREEHARECGYDVKTIFARMKEHLQELEAQGWQVVSPAPREKETACALREEPPKKGK*
Ga0187848_100413402	3300017935	Peatland	MKENEILEEIHRIRAEHAAECGYDVNVLFARMDADLKRLQAEGWQVVSPAPRENETACSLREEPPKPKPQP
Ga0187888_12496352	3300018008	Peatland	MKENEILEEIHRIRAEHAAECGYDVNVLFARMGADLKRLQAEGWQVVSPAPRQNETACSLREEPPKQKQQP
Ga0187888_13223142	3300018008	Peatland	VKTNEILDEIYRLREEHARECGYDIHKMFEQLREGTERLKAEGWQVVSPAPREKETAGALREEPPPQKKDKNHETRLVAA
Ga0187888_13696802	3300018008	Peatland	MKENEILEEIHRIRAEHAAECGYDVNVLFARMDADLKRLQAEGWQVISPAPREKETACSLREEPSKQKQQP
Ga0194038_10087326	3300020158	Anoxic Zone Freshwater	MKYNEILDEIYRIREEHARECGYDIHKMFEQLRENTERLKAEGWQVVSPVPREKETACSLREEPPQQK
Ga0194038_10109242	3300020158	Anoxic Zone Freshwater	MKENEILEEIHRIRAEHAAECGYDVNVLFARMDADLKRLQAEGWQVVSPAPREKETACSLREEPPQKNEKLP
Ga0194038_10287992	3300020158	Anoxic Zone Freshwater	MKENEILSEIHRIREDIARECGYDVKEIFRRMRVQTEQLKAEGWQVVSPAPREKEIACSLREEPPKQQ
Ga0194040_10775771	3300020228	Anoxic Zone Freshwater	ENEILEEIHRIRAEHAAECGYDVNVLFARMDADLKRLQAEGWQVVSPAPREKETACSLREEPPQKNEKLP
Ga0206225_10096702	3300021064	Deep Subsurface Sediment	MKENEILEEIHRIRAEHAAECGYDVNVMFARMDAELERLKSEGWKVVSPASHEKETAYSLREEPPQKT
Ga0206225_11337822	3300021064	Deep Subsurface Sediment	MKENEILSEIHRVREEIARECGYDVKEIFRRMRARTEQLKAQGWQVVSPAPREKETACSLREEPPKQK
Ga0194062_11587641	3300021069	Anoxic Zone Freshwater	KENEILEEIHRIRAEHAAECGYDVNVLFARMDADLKRLQAEGWQVVSPAPREKETACSLREEPPQKNEKLP
Ga0194056_100738681	3300021070	Anoxic Zone Freshwater	MKENEILAEIHRVREEIARECGYDVKEIFRRMRAQTEQLKAEGWQVVSPAPREKETACSLREEPPQKKEKLP
Ga0194056_101062931	3300021070	Anoxic Zone Freshwater	MKENEILSEIHRIREDIARECGYDVKEIFRRMRVQTEQLKAEGWQVVSPAPREKETACSLREEPPKQQ
Ga0194057_101670482	3300021072	Anoxic Zone Freshwater	MKENEILSEIHRIREDIARECGYDVKEIFRRMRVQTEQLKAEGWQVVSPAPREKETACSLREEPPK
Ga0194052_100173915	3300021349	Anoxic Zone Freshwater	MKENEILSDIHRIREDIARECGYDVKEIFRRMRVQTEQLKAEGWQVVSPAPREKEIACSLREEPPKQQ
Ga0194053_100039611	3300021520	Anoxic Zone Freshwater	SEIHRIREDIARECGYDVKEIFRRMRVQTEQLKAEGWQVVSPAPREKETACSLREEPPKQ
Ga0194060_101008863	3300021602	Anoxic Zone Freshwater	MKENEILSEIHRVREEIARECGYDVKEIFRRMRAQTEQLKAEGWQVVSPAPRAKETACSLREEPPQKKEKLP
Ga0224534_10041092	3300022524	Soil	MKENEILEEIHRIRAEHAAQCGYDVNVLFARMDADLKRLQAEGWQVVSPTPRENETACSLREEPPKPKPQP
Ga0212124_103775872	3300022553	Freshwater	MKENEILEEIHRIRAAHAAECSYDVNVMFARMDAELERLKAEGWQVVSPAPREMETACALREEPPQPK
Ga0212088_100528817	3300022555	Freshwater Lake Hypolimnion	MKYNEILDQIYRIREEHARECGYDIHKMFEQLRENTERLKAEGWQVVSPVPREEETACSLREEPPQQK
Ga0212088_101075124	3300022555	Freshwater Lake Hypolimnion	MRDNEILSEIHRVREDIARECGYNMGEIFARMRERTERFRTNGGKIAAPAPREPDPACALREEPPKA
Ga0212121_102539821	3300022556	Anoxic Lake Water	MKENEILSEIHRIRQEIARECDYDVHRLFASMRRRTEKLKAEGGRVASPTPRETDQTC
Ga0212121_103583842	3300022556	Anoxic Lake Water	MNENEILEEIHRIRAEHAAECGYDVKVMLARMDAELERLKAEGWQVVSPAPREKETAYSLREEPPKQK
Ga0236338_11190732	3300022593	Freshwater	MKYNEILDEIYRLREEHARECGYDIHKMFEQLREGTERLKAEGWQVVSPAPREKETADALREEPPKQI
Ga0224555_10210273	3300023088	Soil	MKENEILSEIHRVREEIARECDYDVKEIFRRMRAQTEQLKAQGWRVVSPAPREPETAYALREEPPRQKP
Ga0209083_13244301	3300025162	Freshwater	EILSEIHRIREDIARECGYDVKEIFRRMRVQTEQLKAEGWQVVSPAPREKETACSLREEPPKQQ
Ga0209640_114245991	3300025324	Soil	MKYNEILADLYRSREEHARECGYDIHKMFEQLREDTEHLKAEGWQVVSPAPREKETAYSLREEPPKPEPDKQD
Ga0207931_10124095	3300025499	Arctic Peat Soil	MKENEILEEIHRIRAEHAAECGYDVNVMFARMDADLKRLQAEGWQVVSPAPRKKETAYSLREEPPPKK
Ga0208584_10710961	3300025533	Arctic Peat Soil	MKENEILSEIHRVREEIARECGYDVKEIFRRMRARTEQLKAEGWQVVSPAPREKETASSLREEPPKQK
Ga0209746_10899532	3300025716	Arctic Peat Soil	MKENDILSEIHRVREEIARECGYDVKEIFRRMRARTEQLKAEGWQVVSPAPREKETAYSLREQPPQQK
Ga0209226_100357344	3300025865	Arctic Peat Soil	MKTNEILEDIYRVRAEHAAECGYDVNVMFARMDAELERLKAEGWQVVSPAPREKETSYALREEPPKKK
Ga0209226_102329903	3300025865	Arctic Peat Soil	MKENDILSEIHRVREEIARECGYDVKEIFRRMRARTEQLKAEGWQVVSPAPREKETACSLREEPPKQK
Ga0209540_105108912	3300025888	Arctic Peat Soil	MKENEILSEIHRVREEIARECGYDVKELFRRMRAQTEQLKAQGWQVVSPAPRENETAYALCEEPPKQK
Ga0207662_102178142	3300025918	Switchgrass Rhizosphere	MKENEILSEIHRVREEIARECGYDIHKMFDQIRERTEKLKAEGWEIVSPPPRETEAPLLLRDEPPKK
Ga0255351_10161104	3300026456	Soil	MKENEILEEIHRLRAGHAAECGHDVNALFARMDAELEHLKTQGWRVVSPAPREPETACALHEESPKQKP
Ga0209726_100438224	3300027815	Groundwater	MKENEILEEIHRVRAEHAVECGYDVKVMFARMDAELECLKAEGWQVVSPAPREKQTAYALREDPPTNK
Ga0209514_1000270119	3300027819	Groundwater	MKENEILSEIHLVREEIARESGYDVKEIFRRMRAQTEQLKAQGWRVVSLEPRERPDAAYALHDKSADKPK
Ga0209777_101449374	3300027896	Freshwater Lake Sediment	MKENEILSEIHRVREEIARECGYDVKELFRRMRAQTEQLKAQGWQVVSPAPREKETACSLREEPPKQK
Ga0209777_101449376	3300027896	Freshwater Lake Sediment	MKYNEILDEIYRLREEHARECGYDLHKMFEQLREDTERLKAEGWQVVSPAPREKEAACSLREEPPKPK
Ga0209777_106287351	3300027896	Freshwater Lake Sediment	MKYNEILSEIHRVREEIARECGYDVKELFRRMRVQTEQLKAQGWQVVSPAPRENETACSLREEPPQKKEKLP
Ga0268283_10427262	3300028283	Saline Water	MKFNEILDEIYRIREEHARECGYDIHKMFEQLRENTERLKAEGWQVVSPVPREKETACSLREEPPQQKS
Ga0265323_100077965	3300028653	Rhizosphere	MKYNEILDEIYRLREEHARECSYDIHKMFEQLREGTERLKAEGWQVVSPAPREKETAGALREEPPPPKKRQEP
Ga0311362_108597881	3300029913	Bog	MIENEILAEIHRIHAEHAAECGYDVKVLFAKMDVDLIRLQTEGWQVVTPPPRAKETEYLLREEPPRQAP
Ga0311342_109464071	3300029955	Bog	MKENEILEEIHRLRAGHAAECGHDVNALFARMDAELEHLKTQGWRVVSPAPREPETACALHEES
Ga0307374_105352812	3300031670	Soil	MKENEILEEIHRIRAEHAAECGYDVNVLFARMDADLKRLQAEGWRVVTPAPREKETAYALHEEPSKQKPEP
Ga0315290_113207872	3300031834	Sediment	MKENEILEEIHRIRAEHAAECGYDVKVMLARMDAELERLKAEGWQVVSPAPRAKETADSLREEPPQMKEKLP
Ga0315297_108461131	3300031873	Sediment	MKENEILEEIHRIRAEHAAECGYDVKVMLARMDAELERLKAEGWRVVSPAPREKETACSLREQLPKPKQG
Ga0315297_108575742	3300031873	Sediment	MKENEILEEIHRIRAEHAAECGYDVKVMLARMDAELERLKAEGWQVVSPAPREKETACSLREQLPKPKQG
Ga0315297_112794912	3300031873	Sediment	MKYNEILEEIYRIREEHARECGFDIHKMFEQLREDTERLKAEGWQVVSPALREKETS
Ga0315278_101728374	3300031997	Sediment	MKENEILSEIHRVREDIARECGYDVKEIFRRMRAQTEQLKAEGWQVVSPAPREKETACSLREEPPKQK
Ga0315278_112885221	3300031997	Sediment	ILEEIHRIRAAHAAECGYDVNVMFARMDAELERLKAEGWQVVSPAPREMETACALREEPPQPKQGCR
Ga0315278_114831081	3300031997	Sediment	MKYNEILDEIYRLREEHARECGYDIHKMFEQLREDTERLKAEGWQVVSPAPREKETASSLRDEPPKQK
Ga0315278_116770551	3300031997	Sediment	MKYNEILDEIHRLREEHARECGYDIHKMFEQLRADTERLKSEGWQVVSPAPREADTACALREKPPPKKEKLP
Ga0315274_100367752	3300031999	Sediment	MKENEILEEIHRIRAEHAAECGYDVNVMFARMDAELERLKAEGWQVVSPAPREMETACALREEPPKQK
Ga0315274_100367754	3300031999	Sediment	MKENEILSEIHRVREEIARECGYDVKEIFRRMRAQTEQLKAQGWQVVSPAPRGKETAYSLREEPPKPK
Ga0315274_101142474	3300031999	Sediment	MKENEILEEIHRIRAEHAAECGYDLSVMFARMDAELERLKAEGWQVVSPTPPEAEAPGVLCEEAPNK
Ga0315274_102418174	3300031999	Sediment	MKYNEILEEIYRIREEHARECGYDIHRVFEQLREDTERLKAEGWQVVYPAPPEAETACALREEPPKQK
Ga0315274_105394272	3300031999	Sediment	MKYNEILEEIYRIREEHARECGYDIHKMFEQLREGTERLKAQGWQVVSPAPREKESAYSLREEPPKQK
Ga0315274_113145242	3300031999	Sediment	MKYNEILDEIYRLREEHARECGCDIHKMFEQLREDTERLKAEGWQVVSPAPREKETACALREEPPKQK
Ga0315279_102703632	3300032070	Sediment	MTNEILEEIHRVREQHARECGCDIHKVFEQIRQGTERLKAEGWPVAPPVVREGGETLALREQPPQP
Ga0315279_104013202	3300032070	Sediment	MKENEILEELHRIRAEHAAECGYDAKVMFARMDVELERLKAEGWQVVSPAPREKETAYSLREEPPKQK
Ga0315292_108220303	3300032143	Sediment	MKYNEILEEIYRAREEHARECGYDIHKIFEQLREGTERLKAEGWEVVYPAPRQPEDLGTLREEPPSQPEAPGP
Ga0315292_109982851	3300032143	Sediment	MKENEILEEIHRIRAEHAAECGYDVKVMLARMDAELERLKAEGWQVVSPAPREKETADVLREEPPQKKEKLP
Ga0315295_107725391	3300032156	Sediment	MKYNEILDEIYRLREEHARECGYDIHKMFEQLREDTERLKAEGWQVVSPVPREKETAYALREEPLKPK
Ga0315295_110984971	3300032156	Sediment	MMKYNEILEEIHRVREEHARECGYNVDTLFARMREDLERLKAEGWQVVYPGPREAENPCVLREEPPKKQENPNEKRP
Ga0315295_112502991	3300032156	Sediment	MKENEILEEIHRIRAEHAAECGYDVKVMLARMDAELERLKAEGWQVVSPAPREKETACSL
Ga0315283_102094194	3300032164	Sediment	MNENEILEEIHRIRAEHAAECDYDVKVMLARMDAELERLKAEGWQVVSPAPREKETAYSLREEPPKQK
Ga0315283_110658172	3300032164	Sediment	MKYNEILDEIYRLREEHARECGYNIHRMFEQLREDTERLKAEGWRVVSPAPRENETACSLREEPPQKKEKLP
Ga0315283_111844702	3300032164	Sediment	MKENEILEEIHRIRAEHAAECGYDVNVMFARMDAELERLKAEGWQVVSPAPREKEPAYSLGEEPPPKKEKLP
Ga0315283_116417922	3300032164	Sediment	MKENELLSEIHRVREEIARECGYDVKEIFRRMRVQTEQLKAEGWQVVSPAPREKETADSLREEPPKQQ
Ga0315283_121365001	3300032164	Sediment	MKENEILEEIHRIRAEHAAECGYDVQVMFARMDAELERLKAEGWNVVSPAPRETEPASALREEPPKP
Ga0315276_119575022	3300032177	Sediment	MKYNEILEEIYRAREEHARECGYDIHKIFEQLREGTERLKAEGWQVVYPAPRQPEDLGTLREEPPSQPEAPGP
Ga0315276_123636211	3300032177	Sediment	MKENEILEEIHRIRAEHAAECGYDVQVMFARMDAELERLKAEGWQVVSPAPREKETSYALREDPPQQQ
Ga0315271_100556141	3300032256	Sediment	NMKYNEILDEIYRIREEHARECGYDIHKMFEQLREDTERLKAQGWQVVSPAPHENETADSRTPDIAQ
Ga0315271_102179092	3300032256	Sediment	MKENEILSEIHRVREEIARECGYDVKEIFRRMRAQTEQLKAEGWQVVSPAPREKETADSLREEPPKPK
Ga0315271_102179094	3300032256	Sediment	MKENEILEEIHRIRAEHAAECGYDVKVMLARMDAELERLKAEGWQVVSPAPHEKETADSLREEPPQKKENLRD
Ga0315271_115197112	3300032256	Sediment	MKENNILSEIHRVREEIARECGYDVKEIFRRMRARTEQLKAQGWQVVSPEPREKETADSLREEPPKQK
Ga0315270_100377163	3300032275	Sediment	MKENNILSEIHRVREEIARECGYDVKEIFRRMRARTEQLKAQGWKVVSPAPHEKKTAYSLREQPPKQK
Ga0315270_108051432	3300032275	Sediment	MKENEILSEIHRVREEIARECGYDVKEIFRRMRAQTEQLKAEGWQVVSPAPREKETADSLREEPPKQE
Ga0315286_100313243	3300032342	Sediment	MKENEILEEIHRIRAEHAAECGYDVSVMFARMDAELERLKAEGWQVVSPAPREKETADSLREEPPKQK
Ga0315286_100313247	3300032342	Sediment	MKYNEILEEIYRLREEHARECGYDIHKMFEQLREDTERLKAEGWQVVSPAPREKETACSPREEPPKQK
Ga0315287_103858492	3300032397	Sediment	VKENEILEEIHRVRAEHAAECGYDVKVMFARMDAELERLRAEGWQVVAPASSKPIPASALREEPPKQ
Ga0315287_106413272	3300032397	Sediment	MHNEILDELYRIREEHARECGYDIHEIFERIRRGTELLKTQGWQVVSPAPREAEASGVLREEPPRK
Ga0315287_107587871	3300032397	Sediment	MKENEILEEIHRIRAEHAAECGYDVNVMFARMDAELERLKAEGWQVVSPAPREMETACALREEPPQPKQGCR
Ga0315287_107968431	3300032397	Sediment	MKENEILSEIHRVREEIARECGYDVKELFRRMRVQTEQLKAEGWQVVSPAPREKESADSLREEPPKQK
Ga0315287_126068122	3300032397	Sediment	MKYNEILEEIYRAREEHARECGYDIHKIFEQLRERTERLKAEGWQVVDPAPRQPEDVGTLREEPPSQPEAPGP
Ga0315275_113234203	3300032401	Sediment	MKYNEILDEIHRLREEHARECGYDIHKMFEQLREGTERLKAEGWQVVSPAPREKETAYSL
Ga0315275_114766702	3300032401	Sediment	MKENEILEEIHRIRAEHAAECGYDVNVMFARMDAELERLKAEGWQVVSPAPREKETAYSLREEPPKPK
Ga0315275_116700902	3300032401	Sediment	MKENEILSEIHRVREEIARECGYDVKELFRRMRAQTEQLKAQGWQVVSPAPREMETACALREEPPQPKQG
Ga0315275_118277781	3300032401	Sediment	MKYNEILEEIYRIREEHARECGYDIHRVFEQLREGTERLKAEGWQIVSPAPREAEPSFLLKEEPPKP
Ga0315275_123778362	3300032401	Sediment	MKENEILSEIHRVREDIARECGYDVKEIFRRMRAQTERLQAEGWQVVSPAPREKETACSLREEPPKQK
Ga0315275_125974011	3300032401	Sediment	KYNEILEEIYRLREEHARECGYDIHKMFEQLREDTERLKAEGWQVVSPAPREKETACSPREEPPKQK
Ga0315273_105608584	3300032516	Sediment	MKENEILSEIHRVREEIARECGYDVKELFRRMRVQTEQLKAEGWQVVSPAPREKETAYSLREEPPKQK
Ga0315273_126964891	3300032516	Sediment	MKENEILEEIHRIRAEHAAECGYDVNVMFARMDAELERLKAEGWQVASPAPREKETADSLREEPPKQK
Ga0335078_109784522	3300032805	Soil	RAEHAAECGYDVNVLFARMDAHLKELEAQGWKVVSPEPREPETAYALREEPPKQKPQP
Ga0335078_115331243	3300032805	Soil	MKENEILEEIHRIRAEHAAECGYDVNVLFARMDAHLKELEAQGWRVVSPAPREKETAYSLREEPPKQKPEP
Ga0326727_106304012	3300033405	Peat Soil	MQTNEILDEIYRVREEHARECGYNVDTLFARMRENLERLKAEGWQVVSPSPRETENSCALREELPKK
Ga0316616_1029865261	3300033521	Soil	MPENEILEEIHRVRAEHAAECGYDVTVLLERMDAELQRLQAEGWEVASPAPRKLEPACALREEPPKS
Ga0316617_1027250622	3300033557	Soil	MNENEILEEIHRIRAEHAAECGYDVKVMLARMDAELERLKAEGWQVVSPAPREKETADSLREEPPKQK
Ga0370492_0396825_116_262	3300034282	Untreated Peat Soil	LHDVNALFARMDTELEHLKTQGWRVVSPAPREPETACALHEASPKQKP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters