Metagenome / Metatranscriptome Family F044626

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044626
Family Type	Metagenome / Metatranscriptome
Number of Sequences	154
Average Sequence Length	67 residues
Representative Sequence	MARKTVFVSDLSGDEIKDGNAAQITIKFPDARKGTYVLDVTEEEAEELGRKGRKQARRGRRPKAA
Number of Associated Samples	103
Number of Associated Scaffolds	154

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.47 %
% of genes near scaffold ends (potentially truncated)	24.68 %
% of genes from short scaffolds (< 2000 bps)	87.66 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.234 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.533 % of family members)
Environment Ontology (ENVO)	Unclassified (27.273 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.039 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.75% β-sheet: 0.00% Coil/Unstructured: 89.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 154 Family Scaffolds
PF02417	Chromate_transp	3.90
PF01145	Band_7	3.25
PF08940	DUF1918	3.25
PF04542	Sigma70_r2	2.60
PF00571	CBS	1.95
PF00027	cNMP_binding	1.95
PF00011	HSP20	1.95
PF01738	DLH	1.30
PF13560	HTH_31	1.30
PF09947	DUF2180	1.30
PF13442	Cytochrome_CBB3	1.30
PF07883	Cupin_2	0.65
PF00202	Aminotran_3	0.65
PF04073	tRNA_edit	0.65
PF07690	MFS_1	0.65
PF00254	FKBP_C	0.65
PF09360	zf-CDGSH	0.65
PF13433	Peripla_BP_5	0.65
PF04185	Phosphoesterase	0.65
PF10604	Polyketide_cyc2	0.65
PF07596	SBP_bac_10	0.65
PF01230	HIT	0.65
PF00196	GerE	0.65
PF06210	DUF1003	0.65
PF13489	Methyltransf_23	0.65
PF13276	HTH_21	0.65
PF12680	SnoaL_2	0.65
PF00903	Glyoxalase	0.65
PF01042	Ribonuc_L-PSP	0.65
PF07045	DUF1330	0.65
PF13464	DUF4115	0.65
PF00111	Fer2	0.65
PF00872	Transposase_mut	0.65
PF02195	ParBc	0.65
PF03992	ABM	0.65
PF13551	HTH_29	0.65
PF00183	HSP90	0.65
PF01695	IstB_IS21	0.65
PF00296	Bac_luciferase	0.65
PF02796	HTH_7	0.65
PF07676	PD40	0.65
PF00069	Pkinase	0.65
PF08376	NIT	0.65
PF12072	RNase_Y_N	0.65
PF03808	Glyco_tran_WecG	0.65

COG ID	Name	Functional Category	% Frequency in 154 Family Scaffolds
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	3.90
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.60
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.60
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.60
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.60
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.60
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.95
COG2165	Type II secretory pathway, pseudopilin PulG	Cell motility [N]	1.30
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.65
COG0326	Molecular chaperone, HSP90 family	Posttranslational modification, protein turnover, chaperones [O]	0.65
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.65
COG1922	UDP-N-acetyl-D-mannosaminuronic acid transferase, WecB/TagA/CpsF family	Cell wall/membrane/envelope biogenesis [M]	0.65
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.65
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.65
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.65
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.65
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.23 %
Unclassified	root	N/A	33.77 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.23 %
Unclassified	root	N/A	33.77 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.23 %
Unclassified	root	N/A	33.77 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	35.71 %
Unclassified	root	N/A	33.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.30 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31.82 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.30 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.65 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.65 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20.13 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.30 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.30 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.65 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.77 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	11.04 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	3.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.30 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.95 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.65 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.65 %
Deinococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales	0.65 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.65 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples	0.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.04 %
unclassified Propionibacteriales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales	2.60 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	1.30 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.30 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.95 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.65 %
Deinococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae	0.65 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	0.65 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.65 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.04 %
Propionibacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	2.60 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1.30 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.30 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	1.95 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.65 %
Deinococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus	0.65 %
Actinokineospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora	0.65 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	0.65 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.04 %
Propionibacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	2.60 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1.30 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.30 %
Rhodococcus jostii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus jostii	1.95 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.65 %
Deinococcus murrayi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus murrayi	0.65 %
Actinokineospora auranticolor	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora auranticolor	0.65 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	0.65 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.04 %
Propionibacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	2.60 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1.30 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.30 %
Rhodococcus jostii RHA1	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus jostii → Rhodococcus jostii RHA1	1.95 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.65 %
Deinococcus murrayi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus murrayi	0.65 %
Actinokineospora auranticolor	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora auranticolor	0.65 %
uncultured Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	0.65 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908041\|P3_CLC_ConsensusfromContig103557	Not Available	618	Open in IMG/M
2124908044\|A5_c1_ConsensusfromContig103970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
2124908045\|KansclcFeb2_ConsensusfromContig1041674	Not Available	503	Open in IMG/M
2170459010\|GIO7OMY02HW4U2	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300000956\|JGI10216J12902_103325389	All Organisms → cellular organisms → Bacteria	2142	Open in IMG/M
3300000956\|JGI10216J12902_106079860	Not Available	619	Open in IMG/M
3300000956\|JGI10216J12902_106431913	All Organisms → cellular organisms → Bacteria	1797	Open in IMG/M
3300000956\|JGI10216J12902_115685254	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300000956\|JGI10216J12902_116150673	Not Available	612	Open in IMG/M
3300001538\|A10PFW1_11951773	Not Available	808	Open in IMG/M
3300002568\|C688J35102_120752660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1487	Open in IMG/M
3300004479\|Ga0062595_100650102	Not Available	834	Open in IMG/M
3300005093\|Ga0062594_100365934	Not Available	1142	Open in IMG/M
3300005171\|Ga0066677_10452546	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300005174\|Ga0066680_10103448	All Organisms → cellular organisms → Bacteria	1745	Open in IMG/M
3300005176\|Ga0066679_10152410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1448	Open in IMG/M
3300005332\|Ga0066388_100043521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4484	Open in IMG/M
3300005435\|Ga0070714_100078242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2874	Open in IMG/M
3300005439\|Ga0070711_100978502	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300005445\|Ga0070708_101684091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	590	Open in IMG/M
3300005471\|Ga0070698_100278618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1604	Open in IMG/M
3300005529\|Ga0070741_10048391	Not Available	5230	Open in IMG/M
3300005529\|Ga0070741_10456546	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300005529\|Ga0070741_10790324	Not Available	829	Open in IMG/M
3300005537\|Ga0070730_10033429	All Organisms → cellular organisms → Bacteria	3860	Open in IMG/M
3300005537\|Ga0070730_10086430	Not Available	2190	Open in IMG/M
3300005537\|Ga0070730_10104117	All Organisms → cellular organisms → Bacteria	1961	Open in IMG/M
3300005537\|Ga0070730_10489017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	790	Open in IMG/M
3300005552\|Ga0066701_10898210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300005764\|Ga0066903_100155747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3296	Open in IMG/M
3300005764\|Ga0066903_101863048	All Organisms → cellular organisms → Bacteria	1151	Open in IMG/M
3300005764\|Ga0066903_107608507	Not Available	558	Open in IMG/M
3300005764\|Ga0066903_108474775	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300006046\|Ga0066652_100825819	Not Available	886	Open in IMG/M
3300006046\|Ga0066652_101591038	Not Available	601	Open in IMG/M
3300006175\|Ga0070712_101399059	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300006755\|Ga0079222_11870256	Not Available	584	Open in IMG/M
3300006954\|Ga0079219_11810982	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300009012\|Ga0066710_101141031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus jostii → Rhodococcus jostii RHA1	1206	Open in IMG/M
3300009012\|Ga0066710_101587554	Not Available	1003	Open in IMG/M
3300009012\|Ga0066710_102459490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	754	Open in IMG/M
3300009012\|Ga0066710_103128173	Not Available	639	Open in IMG/M
3300009012\|Ga0066710_104759655	Not Available	507	Open in IMG/M
3300009012\|Ga0066710_104834225	Not Available	504	Open in IMG/M
3300009089\|Ga0099828_10699042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	910	Open in IMG/M
3300009089\|Ga0099828_11003757	Not Available	744	Open in IMG/M
3300009089\|Ga0099828_11286859	Not Available	647	Open in IMG/M
3300009090\|Ga0099827_10246028	All Organisms → cellular organisms → Bacteria	1502	Open in IMG/M
3300009137\|Ga0066709_101052659	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300009137\|Ga0066709_101273463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → environmental samples → uncultured Thermoleophilia bacterium	1080	Open in IMG/M
3300009137\|Ga0066709_103340236	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300009137\|Ga0066709_104063498	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300009148\|Ga0105243_10841643	Not Available	908	Open in IMG/M
3300009176\|Ga0105242_11309920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	748	Open in IMG/M
3300009792\|Ga0126374_10361135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora auranticolor	1000	Open in IMG/M
3300010376\|Ga0126381_102585119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	727	Open in IMG/M
3300010379\|Ga0136449_100122098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5231	Open in IMG/M
3300010379\|Ga0136449_100321285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2805	Open in IMG/M
3300010379\|Ga0136449_102304494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	781	Open in IMG/M
3300011269\|Ga0137392_10168491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1777	Open in IMG/M
3300011271\|Ga0137393_11508135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	562	Open in IMG/M
3300011991\|Ga0120153_1040876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	894	Open in IMG/M
3300011992\|Ga0120146_1027716	Not Available	1018	Open in IMG/M
3300011994\|Ga0120157_1053479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	862	Open in IMG/M
3300011994\|Ga0120157_1060788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	792	Open in IMG/M
3300012003\|Ga0120163_1085267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300012011\|Ga0120152_1003885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7417	Open in IMG/M
3300012011\|Ga0120152_1025626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2152	Open in IMG/M
3300012011\|Ga0120152_1037940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1643	Open in IMG/M
3300012014\|Ga0120159_1002698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9449	Open in IMG/M
3300012014\|Ga0120159_1004589	All Organisms → cellular organisms → Bacteria	6827	Open in IMG/M
3300012014\|Ga0120159_1040291	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300012019\|Ga0120139_1042667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1070	Open in IMG/M
3300012096\|Ga0137389_11312365	Not Available	618	Open in IMG/M
3300012201\|Ga0137365_10218774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus jostii → Rhodococcus jostii RHA1	1421	Open in IMG/M
3300012201\|Ga0137365_10537350	Not Available	858	Open in IMG/M
3300012201\|Ga0137365_10603021	Not Available	805	Open in IMG/M
3300012201\|Ga0137365_11038998	Not Available	593	Open in IMG/M
3300012204\|Ga0137374_10386010	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1118	Open in IMG/M
3300012204\|Ga0137374_11124503	Not Available	557	Open in IMG/M
3300012206\|Ga0137380_10134711	All Organisms → cellular organisms → Bacteria	2254	Open in IMG/M
3300012206\|Ga0137380_10711821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	871	Open in IMG/M
3300012207\|Ga0137381_10527057	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300012207\|Ga0137381_10795789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus jostii → Rhodococcus jostii RHA1	820	Open in IMG/M
3300012209\|Ga0137379_10820394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Deinococcales → Deinococcaceae → Deinococcus → Deinococcus murrayi	835	Open in IMG/M
3300012211\|Ga0137377_10725780	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300012351\|Ga0137386_10824648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300012356\|Ga0137371_10460902	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300012357\|Ga0137384_10559027	All Organisms → cellular organisms → Bacteria → Terrabacteria group	936	Open in IMG/M
3300012359\|Ga0137385_10636455	Not Available	894	Open in IMG/M
3300012363\|Ga0137390_11534774	Not Available	606	Open in IMG/M
3300012469\|Ga0150984_110075503	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300012469\|Ga0150984_122374466	Not Available	535	Open in IMG/M
3300012532\|Ga0137373_10364125	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300012532\|Ga0137373_10396993	Not Available	1072	Open in IMG/M
3300012532\|Ga0137373_10955463	Not Available	624	Open in IMG/M
3300012951\|Ga0164300_10372059	Not Available	775	Open in IMG/M
3300012951\|Ga0164300_10928992	Not Available	553	Open in IMG/M
3300012957\|Ga0164303_10132134	Not Available	1292	Open in IMG/M
3300012957\|Ga0164303_10960293	Not Available	604	Open in IMG/M
3300012958\|Ga0164299_10034446	All Organisms → cellular organisms → Bacteria	2235	Open in IMG/M
3300012958\|Ga0164299_10258584	Not Available	1045	Open in IMG/M
3300012961\|Ga0164302_10193724	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300012985\|Ga0164308_10949299	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300012986\|Ga0164304_10307167	Not Available	1090	Open in IMG/M
3300012987\|Ga0164307_10845085	Not Available	732	Open in IMG/M
3300012989\|Ga0164305_11676802	Not Available	570	Open in IMG/M
3300013308\|Ga0157375_12781656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300013763\|Ga0120179_1071966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	774	Open in IMG/M
3300013764\|Ga0120111_1075306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300013768\|Ga0120155_1031079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1688	Open in IMG/M
3300013772\|Ga0120158_10349494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	696	Open in IMG/M
3300013772\|Ga0120158_10410955	Not Available	619	Open in IMG/M
3300014058\|Ga0120149_1153449	Not Available	635	Open in IMG/M
3300014326\|Ga0157380_12702640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300015371\|Ga0132258_10101482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6780	Open in IMG/M
3300015371\|Ga0132258_10573886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2829	Open in IMG/M
3300015371\|Ga0132258_11390003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1773	Open in IMG/M
3300015372\|Ga0132256_100639947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1178	Open in IMG/M
3300015373\|Ga0132257_101442958	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300015373\|Ga0132257_103278403	All Organisms → cellular organisms → Bacteria → Terrabacteria group	589	Open in IMG/M
3300015374\|Ga0132255_103705174	Not Available	650	Open in IMG/M
3300016319\|Ga0182033_10651307	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300016387\|Ga0182040_11611972	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300018433\|Ga0066667_10791481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	805	Open in IMG/M
3300018433\|Ga0066667_11340327	Not Available	626	Open in IMG/M
3300018468\|Ga0066662_10361589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1255	Open in IMG/M
3300018482\|Ga0066669_11922928	Not Available	551	Open in IMG/M
3300019888\|Ga0193751_1119426	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300025915\|Ga0207693_10700763	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300025916\|Ga0207663_10200919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1438	Open in IMG/M
3300025932\|Ga0207690_11428643	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300025935\|Ga0207709_11019554	Not Available	677	Open in IMG/M
3300025972\|Ga0207668_11290367	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	657	Open in IMG/M
3300027857\|Ga0209166_10027349	All Organisms → cellular organisms → Bacteria	3489	Open in IMG/M
3300027857\|Ga0209166_10095609	Not Available	1663	Open in IMG/M
3300027857\|Ga0209166_10418647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	694	Open in IMG/M
3300028784\|Ga0307282_10232140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	885	Open in IMG/M
3300031093\|Ga0308197_10338303	Not Available	568	Open in IMG/M
3300031170\|Ga0307498_10173213	Not Available	734	Open in IMG/M
3300031543\|Ga0318516_10811202	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300031544\|Ga0318534_10283549	Not Available	954	Open in IMG/M
3300031770\|Ga0318521_10886855	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300031796\|Ga0318576_10531881	Not Available	554	Open in IMG/M
3300031879\|Ga0306919_11407979	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300031910\|Ga0306923_10892809	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300031942\|Ga0310916_10755286	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300031947\|Ga0310909_10947216	Not Available	705	Open in IMG/M
3300031954\|Ga0306926_10442312	All Organisms → cellular organisms → Bacteria	1602	Open in IMG/M
3300032068\|Ga0318553_10362276	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300032160\|Ga0311301_10670209	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300032160\|Ga0311301_11573690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	803	Open in IMG/M
3300032160\|Ga0311301_12007436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300032261\|Ga0306920_100241353	All Organisms → cellular organisms → Bacteria	2696	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.61%
Host-Associated	Host-Associated	10.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.61%
Plants	Host-Associated → Plants	10.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.49%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.52%
Loam	Environmental → Terrestrial → Soil → Loam	9.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.25%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.25%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	38.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	13.64%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.60%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.30%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.53%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	12.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.14%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.55%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.30%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.30%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.30%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908041	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011991	Permafrost microbial communities from Nunavut, Canada - A34_65cm_12M	Environmental	Open in IMG/M
3300011992	Permafrost microbial communities from Nunavut, Canada - A23_65cm_12M	Environmental	Open in IMG/M
3300011994	Permafrost microbial communities from Nunavut, Canada - A7_65cm_12M	Environmental	Open in IMG/M
3300012003	Permafrost microbial communities from Nunavut, Canada - A20_80cm_0.25M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_CLC_01464540	2124908041	Soil	DQVARKSIFVSDLSGGEIPDGKGAQVTIKFNDARKGSILLDVTDEEGEELGRKGRRQARRGRRPKAGSDQPNNLAAET
A5_c1_01823210	2124908044	Soil	MAKKAIHISDLSGEEVPEGQGATISIKFADARKGTYVLDVTDNEGEDLGSKGRKQARRGRKPKAA
KansclcFeb2_10502870	2124908045	Soil	MAKKTLVVSDLSGDEIQEGKSATISIKLADARKETYVLDVTDEEAEELGRKGRKQAQRGRRPAS
F62_00335430	2170459010	Grass Soil	MAKKTVFVSDLSGKEIPDGRAAQISIKFSDARKGTYVLDVLDDEAESLAVRVGSRRG
JGI10216J12902_1033253893	3300000956	Soil	MAKRMIFVSDLSGDQINDGKAARITINFQDARKGTYLLDVTEAEAEELGKKGTKQARRGRKPKATATSGRAATEA*
JGI10216J12902_1060798602	3300000956	Soil	MARKTIFVSDLSGKAIQDGKAARITVNFQDARKGTYVLDVTEEEGEDIGRKGTRQARRGRKPKARD*
JGI10216J12902_1064319133	3300000956	Soil	MAKKTVFVSDLSGKEIREGSGATISIKFADARKGTYVLDVTDEEADELGQKGRKQARRGRKPKAAA*
JGI10216J12902_1156852542	3300000956	Soil	MAKKTLFVSDLSGDEIQEGKSATISIKLADARKETYVLDVTDEEAEELGRKGRK
JGI10216J12902_1161506731	3300000956	Soil	MAKKTVIVSDLSGQEIPTGRGATVSIRFNDARRGVIALDVTDEEAEAMGAKGRKQARRGR
A10PFW1_119517733	3300001538	Permafrost	VAKKTVHISDLSGKEIREGSGATITIKFADARKGQYVIDATDDEAEELGQKGRKQARRGRRPKAVQA*
C688J35102_1207526602	3300002568	Soil	MARKTVFVSDMSGNEIQEGKAARISISFQDARKGTYVLDVTEEEAEDLGRKGTKQARRGRRPKNAS*
Ga0062595_1006501022	3300004479	Soil	VAKKSIFVSDLSGEEIPDGKGAQVTIRFNDARKGTLALDVTDEEGEAMGAKGRKQARRGRRPKAAQP*
Ga0062594_1003659343	3300005093	Soil	MARKTVFVSDLSGDAIADGRAATVTIRFTDARKGAYVLDVTEQEAEELGRKGRKQARRGRPAKTS*
Ga0066677_104525462	3300005171	Soil	MARKTVVVSDLSGDAIEEGKAATISIRFSDARKGAYVLDVTEAEAEELGRKGRKQGRRGRRPKGADGGS*
Ga0066680_101034481	3300005174	Soil	VSDLSGAEIADGKGAQVTIRFNDARKGTIMLDVTDEEAEELGRKGRRQARRGRRSKAASEAAS*
Ga0066679_101524102	3300005176	Soil	MAKKTVFVSDLSGAEIADGKSATISIKFADARKGTYVLDVSEAESEELGQKGRKQARRGRRPKAAA*
Ga0066388_1000435213	3300005332	Tropical Forest Soil	MARKTVFVSDLSGNEIQEGKAARISISFQDARKGTYVLDVTEEEAEELGRKGVKQARRGRRPKSAS*
Ga0070714_1000782425	3300005435	Agricultural Soil	MARKSVVVSDLSGKEIDEGNAATITIKFADARKGIYVLDVTDDEAEDLGRKGRKQARRGRRPKSQQ*
Ga0070711_1009785023	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	SCNVLRIRSAAKVREMARKSVVVSDLSGKEIDEGNAATITIKFADARKGIYVLDVTDDEAEDLGRKGRKQARRGRRPKSQQ*
Ga0070708_1016840911	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MARKTLLVSDLSGAEIADGKGATVTSNFRDARKGTIVRDVTDSEAEEMGRKGRRQARRGRRPKAAQVA*
Ga0070698_1002786182	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VARKSIFVSDLSGREIPEGKGAQMTIKFNDARKGTIVLDVSDAEAEEMGKKGRRQARRGRRPKSVQPS*
Ga0070741_100483919	3300005529	Surface Soil	VARRTIVVSDLSGDAIQEGKGARITISFDDARKGTIVIDATAEEAEEIGKKGRRQARRGRRPKAGTPSD*
Ga0070741_104565461	3300005529	Surface Soil	MARKTVFVSDLSGKEIQEGKDATITIRFADARKGIYVLDVTDDEAEELGRKGRKQARRGHRPRTQATI*
Ga0070741_107903242	3300005529	Surface Soil	MARKSIFISDLSGDEIPEGKGAQVSIRFNDARKGTIVLDATDDEAEEMGRKGREQARRGRRLKAGQGV*
Ga0070730_100334294	3300005537	Surface Soil	MARKTVFVSDLSGAAIADGKAATITIRFSDARKGTYVLDVTEQEAEELGAKGRKQARRGRPPKTA*
Ga0070730_100864303	3300005537	Surface Soil	MARKTVVVSDLSGDAIQEGRAATISIRFSDARKGAYVLDVTEAEAEELGRKGRKQGRRGRKPKGADGGS*
Ga0070730_101041171	3300005537	Surface Soil	MARKAIFVSDLSGDPIEEGRAATVSIRFSDARKGTYLLDVTEAEAEELGRKGRKQARRGRRPKQAS*
Ga0070730_104890172	3300005537	Surface Soil	MAKKTIHISDLSGKEVLEGKSATISIKFGDARKGTYVLDVTESEAEELGQKGRKQARRGRKPKAT*
Ga0066701_108982102	3300005552	Soil	VARKSIFVSALSGAEIQEGKGAQVTIKFLDARKGTIVMDVTDAEGERLGVKGRKQARRGRRPKAAPSEVNGLNDRSIA*
Ga0066903_1001557472	3300005764	Tropical Forest Soil	MARKTVFVSDLSGNEIQEGKAARISISFQDARKGTYVLDVTEEEAEELGRKGTKQARRGRRPKSAS*
Ga0066903_1018630482	3300005764	Tropical Forest Soil	MAKKTVFVSDLSGDAIEEGKAATISIKFADARKGTYVLDVTEDEAEELGRKGRKQARRGRRPKNAG*
Ga0066903_1076085071	3300005764	Tropical Forest Soil	MARKTVFVSDLSGDEIKDGNAAQITIKFPDARKGTYVLDVTEEEAEELGRKGRKQARRGRRPKAA*
Ga0066903_1084747752	3300005764	Tropical Forest Soil	VAKKTVFVSDLSGKEIQEGKSATISIKFADARKGTYVLDVTDEEAEELGRKGRKQA
Ga0066652_1008258192	3300006046	Soil	MAKKTVFVSDLSGKEIPDSRAAQISIKFSDARKGTYVLDVLDDEAEELGQKGRKQARRGRRPKATS*
Ga0066652_1015910381	3300006046	Soil	VAKKTVFVSDLSGKEIPDGRAAQISIKFSDARKGAYVLDVLDDEAEELGRKGRKQARRGRKPKAA*
Ga0070712_1013990593	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KSVVVSDLSGKEIDEGNAATITIKFADARKGIYVLDVTDDEAEDLGRKGRKQARRGRRPKSQQ*
Ga0079222_118702562	3300006755	Agricultural Soil	VARKSIFVSDLSGAEIQDGKGAQVTIRFNNARKGSIVLDVTDSEAEELGQKGRRQTRRGRRPKAETV*
Ga0079219_118109822	3300006954	Agricultural Soil	MARKTVFVSDLSGKEIQDGRSATISIKFEDARKGTYVLDVTEDEAEELGRKGRKQARR
Ga0066710_1011410312	3300009012	Grasslands Soil	VAKKTIHISDLSGKQIADGKSATISIKFADARKGTYVLDVTDSEAEDLGSKGRKQARRGRKPKAAA
Ga0066710_1015875542	3300009012	Grasslands Soil	MEVHVARKAIVVSDLSGETIQEGKAARITITFDDARKGTIVIDATAEEAEAIGKKGQRQARRGRRPRATTATEAAT
Ga0066710_1024594901	3300009012	Grasslands Soil	MARKTLLVSDLSGAEISEGRGATVTINFKDARKGTIVLDVTDSEAEEMGRKGRRQARRGRRPKAAETA
Ga0066710_1031281731	3300009012	Grasslands Soil	MARKSIFVSDLSGEEIQEGKGAQVTIRFNDARKGSIVLDVTDEEGEAMGAKGRKQARRGRRPKAAEPS
Ga0066710_1047596551	3300009012	Grasslands Soil	MARKSIFVSDLSGEEIQEGKGAQVTIRFNDARKGTIVLDVTDDEGEAMGAKGRKQARRGRRPKAAQNA
Ga0066710_1048342251	3300009012	Grasslands Soil	MARKSIFVSDLSGEEIQEGKGAQVTIRFNDARKGTIVLDVTDEEGEAMGTKGRKQARRGRRPKAAQSA
Ga0099828_106990422	3300009089	Vadose Zone Soil	MAKKTIHISDLSGEEVPEGQGATISIKFADARKGTYVLDVTDSEGEDLGSKGRKQARRGRMPKAA*
Ga0099828_110037573	3300009089	Vadose Zone Soil	LARKSIFVSDLSGKEISEGKGAQVTIKFNDARKGSILLDVTDEEGEELGRKGRRQARRGRRPKAAQSS*
Ga0099828_112868591	3300009089	Vadose Zone Soil	LARKSIFVSDLSGREISEGKGAQVTIRFNDARKGSIVLDVTDEEGEELGRKGRRQARRGRRPTAAQSN*
Ga0099827_102460282	3300009090	Vadose Zone Soil	LARKSIFVSDLSGKEIPEGKGAQVTIKFNDARKGSIVLDVTDEGGEELGQKGRRQARRGRRPKATQSN*
Ga0066709_1010526593	3300009137	Grasslands Soil	MARKTLLVSDLSGAEIPDGKGATVTINFRDARKGTIVLDVTDSEAEEMGRKGRRQARRGRRPKTAQT*
Ga0066709_1012734631	3300009137	Grasslands Soil	MARKSIFVSDLSGEEIQEGKGAQVTIRFNDARKGTIVLDVTDEEGEAMGTKGRKQARRGRRPKAAQSA*
Ga0066709_1033402361	3300009137	Grasslands Soil	VAKKTIHISDLSGKQIADGKSATISIKFADARKGTYVLDVTDEEAEELGQKGRKQARRGRRPKAAQG*
Ga0066709_1040634982	3300009137	Grasslands Soil	MARKSIFVSDLSGEEIADGKGAQVTIRFNDARKGTIVLDVTDDEGEAMGATGRKQARRGRRPKAIPGA*
Ga0105243_108416432	3300009148	Miscanthus Rhizosphere	VARNEIAREDPLARKTVCVSDLSGNEIQDGKAARISISFQDARKGTYVLDVTETEAEELGRKGTKQARRGRRPKAVA*
Ga0105242_113099201	3300009176	Miscanthus Rhizosphere	VARNEIAREDPLARKTVFVSDLSGNEIQDGKAARISISFQDARKGTYVLDVTETEAEELGRKGTKQARRGRRPKAVA*
Ga0126374_103611351	3300009792	Tropical Forest Soil	MARKTVFVSDLSGNEIQEGKAARISISFQDARKGTYVLDVTEEEAEELGRKGTKQARR
Ga0126381_1025851191	3300010376	Tropical Forest Soil	MARKSVVVSDLSGKEIDEGNAATITIKFGDARKGIYVLDVTEDEAEDLGRKGRRQARRGRRPKNQQ*
Ga0136449_1001220985	3300010379	Peatlands Soil	MAKKTIHISDMSGKQIAEGKSATISIKFSDARKGTYVLDVTEAEAEELGSKGRKQARRGRKPKAAA*
Ga0136449_1003212857	3300010379	Peatlands Soil	MAKKTIHISDLSGKEVPEGKSATISIKFTDARKGTYVLDVTEAEAEELGEKGRKQARRGRKPKAA*
Ga0136449_1023044941	3300010379	Peatlands Soil	MARKTIFVSDLSGEPIEEGKAAQISIKFTDARKGTYVLDVTEAEAEELGQKGRKQARRGRKPKVS*
Ga0137392_101684912	3300011269	Vadose Zone Soil	MAKKTIHISDLSGEEVPEGQGATISIKFADARKGTYVLDVTDDEGEDLGIKGRKQARRGRKPKAA*
Ga0137393_115081351	3300011271	Vadose Zone Soil	MAKKTIHISDLSGEEVPEGQGATISIKFADARKGTYVLDVTDDEGEDLGIKGRKQARRGR
Ga0120153_10408761	3300011991	Permafrost	LARKSIFVSDLSGKEISEGKGAQVTIRFNDARKGNILLDVTDEEGEELGRKGRRQARRGRRPKAAQSVVLATRLSVAG*
Ga0120146_10277162	3300011992	Permafrost	LARKSIFVSDLSGKEISEGKGAQVTIRFNDARKGSILLDVTDEEGEELGRKGRRQARRGRRPKATQSN*
Ga0120157_10534791	3300011994	Permafrost	LSLPQERSSSMARKIVLVSDLSGAEIQEGKGAQVTIKFNDARKGTIVLDVTNTDAVQMGAKGRRQARRGRRPKAAKAE*
Ga0120157_10607882	3300011994	Permafrost	LARKSIFVSDLSGKEISEGKGAQVTIKFNDARKGSIVLDVTDEEGEELGRKGRRQARRGRRPKAAQSN*
Ga0120163_10852671	3300012003	Permafrost	LARKSIFVSDLSGKEISEGKGAQVTIRFNDARKGSIVLDLTDEEGEELGRKGRRQARRGRRPKAAQSN*
Ga0120152_10038858	3300012011	Permafrost	LARKSIFVSDLSGKEISEGKGAQVTIRFNDARKGNILLDVTDEEGEELGRKGRRQARRGRRPKATQSN*
Ga0120152_10256264	3300012011	Permafrost	MAKKTIHISDLSGKEVPEGHGATISIKFADARKGTYVLDVTDSEGEDLGSKGRKQARRGRKPKAA*
Ga0120152_10379404	3300012011	Permafrost	RKTIHISDLSGTEVPEGRGATVSIKFADARKGTYVLDVTDEEAEEIGQKGRKQARRGRRPKAA*
Ga0120159_100269810	3300012014	Permafrost	LARKSIFVSDLSGKEISEGKGAQVTIRFNDARKGSILLDVTDEEGEELGRKGRRQARRGRRPKAAQSVVLATRLSVAG*
Ga0120159_10045896	3300012014	Permafrost	LARKSIFVSDLLGKEISEGKGAQVTIKFNDARKGSIVLDVTDEEGEELGRKGRRQARRGRRPKAAQSN*
Ga0120159_10402911	3300012014	Permafrost	MARETIHISDLSGTEVSEGRGATISIKFADARKGTYVLDVTDEEAEEIGQKGRKQARRGRRPKAA*
Ga0120139_10426673	3300012019	Permafrost	LARKSIFVSDLSGKEISEGKGAQVTIRFNDARKGSIVLDVTDEEGEELGRKGRRQARRGRRPKAAQSN*
Ga0137389_113123652	3300012096	Vadose Zone Soil	LARKSIFVSDLSGKEISEGKGAQVTIKFNDARKGSILLDVTDEEGEELGQKGRRQARRGRRPKAAQSN*
Ga0137365_102187743	3300012201	Vadose Zone Soil	VAKKTIHISDLSGKQIADGKSATISIKFADARKGTYVLDVTEAEAEDLGSKGRKQARRGRKPKAA*
Ga0137365_105373501	3300012201	Vadose Zone Soil	IDLIRGEGSVLVRRQTMARNSIFVSYLSGEEIQERKGAQVTIRFNDARKGTIVLDVTDEEGEAMGTKGRKQARRGRRPKAAQSA*
Ga0137365_106030212	3300012201	Vadose Zone Soil	SDLSGEEIADGKGAQVTIRFNDARKGTIVLDVTDDEGEAMGATGRKQARRGRRPKAIPGA
Ga0137365_110389981	3300012201	Vadose Zone Soil	VARKSIFVSDLSGEEIQEGKGAIISIKFNDARKGTIVLDVTDDEGEAMGAKGRKQARRGRRPKEAA*
Ga0137374_103860101	3300012204	Vadose Zone Soil	MAKKTVLLSDLSGAEIPEGRGATVSIRFNDARRGVIALDVTDEEAESMGAKGRKQARRGRLSRPV*
Ga0137374_111245031	3300012204	Vadose Zone Soil	MARRTLLVSDLSGEEIPDGKGATVTINFNDARKGTIILDLTDSEAEQMGARGRKQAKRGRRP*
Ga0137380_101347112	3300012206	Vadose Zone Soil	MARKSIFVSDLSGEEIADGKGAQVTIRFNDARKGTIILDVTDDEGEAMGATGRKQARRGRRPKAIPGA*
Ga0137380_107118212	3300012206	Vadose Zone Soil	LARKSIFVSDLSGKKISEGKGAQVTIRFNDARKGSILLDVTDEEGEELGRKGRRQARRGRRPKAAQRS*
Ga0137381_105270572	3300012207	Vadose Zone Soil	MARKSIFVSDLSGEEIADGKGAQVTIRFNDARKGTIILDVTDDEGEAMGATGRKQARRGRRPKAIPSA*
Ga0137381_107957891	3300012207	Vadose Zone Soil	VAKKTIHISDLSGKQIADGKSATISIKFADARKGTYVLDVTEAEAEDLGSKGRKQARRGRKPKAAA*
Ga0137379_108203942	3300012209	Vadose Zone Soil	VARRSIFVSDLSGEEIQEGKGAIISIKFNDARKGTIVLDVTDDEGEAMGAKGRKQARRGRRPRAQAEAA*
Ga0137377_107257802	3300012211	Vadose Zone Soil	VAKKTIHISDLSGKQIADGKSATISIKFADARKGTYVLDVTEAEAEDLGQKGRKQARRGRKPKAAA*
Ga0137386_108246483	3300012351	Vadose Zone Soil	VKEETMAKKTIHISDLSGKQIADGKSATISIKFADARKGTYVLDVTEAEAEDLGSKGRKQARRGRKPKAA*
Ga0137371_104609022	3300012356	Vadose Zone Soil	VKEETMAKKTIHISDLSGKQIADGKSATISIKFTDARKGTYVLDVTEAEAEDLGSKGRKQARRGRKPKAVSS*
Ga0137384_105590272	3300012357	Vadose Zone Soil	MARKTIVVSDLSGKQIADGRGARITINFNDARKGTIVLDVTDQEGEELGANGRRQARRGRRPKAAAS*
Ga0137385_106364553	3300012359	Vadose Zone Soil	LARKSIFVSDLSGKKISEGKGAQVTIRFNDARKGSILLDLTGKEGEELGRKGRRQARRGRRPKAAQSN*
Ga0137390_115347742	3300012363	Vadose Zone Soil	LARKSIFVSDLSGKEIPEGKGAQVTIKFNDARKGSIVLDVTDEEGEELGQKGRRQARRGRRPKATQSD*
Ga0150984_1100755032	3300012469	Avena Fatua Rhizosphere	RKEDPLARKTVFVSDLSGNEIQDGKAAKISISFQDARKGTYVLDVTETEAEELGQKGTKQARRGRRPKAAA*
Ga0150984_1223744661	3300012469	Avena Fatua Rhizosphere	DMARRTILVSDVSGDEIEDGKGATVTIKFEDARKGTIVMDVTADEAEAMGAKGRKQARRGRRPKLE*
Ga0137373_103641252	3300012532	Vadose Zone Soil	VVDGHARKSIFVSDLSGKEISEGKGAQVTTRFNDARKGSIILDITDEEGEELGRKGRRQARRGCWAKAAQSN*
Ga0137373_103969933	3300012532	Vadose Zone Soil	MARKSIFVSDLSGNEIPEGRGAQVSIKFNDARKGTIVLDVTDEEGEEMGRTGRKQARRRRRPKAVQTP*
Ga0137373_109554632	3300012532	Vadose Zone Soil	MVSDVSGAEIQDGKGATVTIRFSDARKGTIVLDVTDEEADEMGRKGRRQARRGRRPKAEAAS*
Ga0164300_103720592	3300012951	Soil	MAKKTVFVSDLSGHEIKDGNAATITIKFTDARKGTYVLDVTEAEAEELGQKGRKQA
Ga0164300_109289922	3300012951	Soil	SGKEVPDGTGATITIKFTDARKGQYVIDATDQEGEELGQKGRKQARRGRKPKVASG*
Ga0164303_101321341	3300012957	Soil	MVPTSAKRRREMAKKTIHISDLSGKEVPDGTGATITIKFNDARKGQYVLDVLDDEAEELGRKGRKQSRRGRKPKAAA*
Ga0164303_109602931	3300012957	Soil	MGFVSDVAGSEIEEGKSATISSKFEEARKGIYVLDVTEAEAEELGRKGRKQARRGRRPKAA*
Ga0164299_100344462	3300012958	Soil	MAKKTIHVSDLSGKEVPDGTGATITIKFNDARKGQYVLDVLDDEAEELGRKGRKQSRRGRKPKAAV*
Ga0164299_102585841	3300012958	Soil	VFVSDLSGNEIQDGKAARISISFQDARKGTYVLDVTEDEAEELGRKGTKQARRGRRPKAV
Ga0164302_101937241	3300012961	Soil	MAKKTIHISDLSGKEVPDGTGATITIKFNDARKGQYVLDVLDDEAEELGRKGRKQSRRGRKPKAAA*
Ga0164308_109492991	3300012985	Soil	MVFVSDLSGSEIEEGKSATISIKFEDARKGIYVLDVTEAEAEELGRKGRKQARRGRRPKAA*
Ga0164304_103071671	3300012986	Soil	MAKKTIHISDLSGKEVPDGAGATITIKFNDARKGQYVLDVLDTEAEELGSKGRKQARRGRRPKAAA*
Ga0164307_108450851	3300012987	Soil	MAKKTIHISDLSGKEVPDGTGATITIKFNDARKGQYVLDVLDDEAEELGRKGRKQARRGRRPKAEGGSS*
Ga0164305_116768021	3300012989	Soil	TIHISDLSGKEVPDGAGATITIKFNDARKGQYVLDVLDDEAEELGRKGRKQSRRGRKPKAAA*
Ga0157375_127816562	3300013308	Miscanthus Rhizosphere	LARKTVFVSDLSGNEIQDGKAARISISFQDARKGTYVLDVTETEAEELGRKGTKQARRGR
Ga0120179_10719661	3300013763	Permafrost	LARKSIFVSDLSGKEISEGKGARVTIKFNDARKGSIVLDVTDEEGEELGRKGRRQARRGRRPKAV*
Ga0120111_10753062	3300013764	Permafrost	MAKKTIHISDLSGKEVPEGHGATISIRFADARKGTYVLDVTDEEAEDLGQKGRKQLRRG
Ga0120155_10310793	3300013768	Permafrost	LARKSIFVSDLSGKEISEGKGAQVTIRFNDARKGSIVLDVTDEEGEELGRKGRRQARRGRRPKATQSN*
Ga0120158_103494943	3300013772	Permafrost	PKRCCRAKGETIAKKTIHISDLSGKEVPEGTGATITIKFADARKGTYVLDVTDEEAEDLGQKGRKQLRRGRKPKAA*
Ga0120158_104109551	3300013772	Permafrost	DLSEQEIQDGKGAIVTIRFGDARKGTIVLDVTDEEGEQLGEKGRKQARRGRRPKSVQEG*
Ga0120149_11534492	3300014058	Permafrost	LARKSIFVSDLSGKEISEGKGARVTIKFNDARKGSIVLDVTDEEGEELGRKGRRQARRGRRPKATQSN*
Ga0157380_127026402	3300014326	Switchgrass Rhizosphere	LARKTVFVSDLSGNEIQDGKAARISISFQDARKGTYVLDVTETEAEELGRKGTK
Ga0132258_101014826	3300015371	Arabidopsis Rhizosphere	MAKKTVFVSDLSGHEIKDGNAATISIKFTDARKGTYVLDVTEAEAEELGQKGRKQARRGRKPKQAG*
Ga0132258_105738862	3300015371	Arabidopsis Rhizosphere	LARKTVFVSDLSGNEIQDGKAARISISFQDARKGTYVLDVTEGEAEELGRKGTKQARRGRRPKAAA*
Ga0132258_113900033	3300015371	Arabidopsis Rhizosphere	MARKTVFVSDLSGKEIPEGRAAQISIKFSDARKGIYVLDVLDEEAEELGRKGRKQARRGRRPKAEGGSS*
Ga0132256_1006399473	3300015372	Arabidopsis Rhizosphere	MAKKTVFVSDLSGHEIKDGNAATISIKFTDARKGTYVLDVTEAEAEELGQKGRKQARRGR
Ga0132257_1014429581	3300015373	Arabidopsis Rhizosphere	KTMAKKTVFVSDLSGHEIKDGNAATISIKFTDARKGTYVLDVTEAEAEELGQKGRKQARRGRKPKQAG*
Ga0132257_1032784032	3300015373	Arabidopsis Rhizosphere	VFVSDLSGNEIQDGKAARISISFQDARKGTYVLDVTEGEAEELGRKGTKQARRGRRPKAAA*
Ga0132255_1037051742	3300015374	Arabidopsis Rhizosphere	MARKSIFVSDLSGEEIQEGRGAQVTIRFNDARKGSIVLDVTDEEGEELGRKGRRQARRGRRPKAAQSA*
Ga0182033_106513071	3300016319	Soil	HKEDRMAKTSTRRSLMAKKTVHISDLSGAEIPEGSGATITIKFVDARKGQYVLDVSDSEAEELGGKGRKQARRGRRPKAAA
Ga0182040_116119722	3300016387	Soil	MAKKTVHISDLSGAEIPEGSGATITIKFADARKGQYVLDVSDSEAEEWGRKGR
Ga0066667_107914813	3300018433	Grasslands Soil	MAKKTIHISDLSGKEVPEGTGATITIKFTDARKGQYVLDTTDAEAEELGQKGRKQARRGRKPKTA
Ga0066667_113403271	3300018433	Grasslands Soil	VARKSIFVSDLSGREIQDGKGAQVTIRFSDARKGTIVLDVTDDEADEMGRKGRRQARRGRRPKAVQPT
Ga0066662_103615892	3300018468	Grasslands Soil	VARKSIFVSALSGAEIQEGKGAQVTIKFLDARKGTIVMDVTDAEGEQLGVKGRKQARRGRRPKAAPSEVNGLNDRSIA
Ga0066669_119229281	3300018482	Grasslands Soil	VARKTIVVSGLSGDAIQEGRGARITINFDDARKGTIVIDATAEEAEEIGRKGRRQARRGRHPKAAPTA
Ga0193751_11194262	3300019888	Soil	MARKTIHISDLSGTEVPEGRGATISIKFADARKGTYVLDVTDEEAEEIGQKGRKQARRGRRPKAA
Ga0207693_107007633	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	KSVVVSDLSGKEIDEGNAATITIKFADARKGIYVLDVTDDEAEDLGRKGRKQARRGRRPKSQQ
Ga0207663_102009192	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKSIFVSDLSGEEIQEGKGAQVTIRFNDARKGSIVLDVTDEEGEELGRKGRKQARRGRRPKTAVAS
Ga0207690_114286432	3300025932	Corn Rhizosphere	LARKTVFVSDLSGNEIQDGKAARISISFQDARKGTYVLDVTETEAEELGRKGTKQARRGRRPKAVA
Ga0207709_110195541	3300025935	Miscanthus Rhizosphere	VFVSDLSGNEIQDGKAARISISFQDARKGTYVLDVTETEAEELGRKGTKQARRGRRPKAV
Ga0207668_112903671	3300025972	Switchgrass Rhizosphere	VAKKMVFVSDLSDAEIEEGKSATITIKFEDARKGIYVLDVTEAEAEELGRKGRKQARRGRRPKAS
Ga0209166_100273493	3300027857	Surface Soil	MARKTVFVSDLSGAAIADGKAATITIRFSDARKGTYVLDVTEQEAEELGAKGRKQARRGRPPKTA
Ga0209166_100956092	3300027857	Surface Soil	MARKTVVVSDLSGDAIQEGRAATISIRFSDARKGAYVLDVTEAEAEELGRKGRKQGRRGRKPKGADGGS
Ga0209166_104186472	3300027857	Surface Soil	MAKKTIHISDLSGKEVLEGKSATISIKFGDARKGTYVLDVTESEAEELGQKGRKQARRGRKPKAT
Ga0307282_102321403	3300028784	Soil	LARKSIFVSDLSGKEISEGKGAQVTIKFNDARKGSIVLDVTDEEGEELGRKGRRQARRGRRPKAAQSN
Ga0308197_103383032	3300031093	Soil	LARKSIFVSDLSAKEISDGKGAQVTIKFNDARKGSIVLDVTDEEGEELGRKGRRQARRGRRPKAAQSN
Ga0307498_101732132	3300031170	Soil	MARKSIFVSDLSGAEIEEGKGAQVTIRFNDARKGSIVLDVTDQEGEELGRKGRRQARRGRRPKGQPAG
Ga0318516_108112021	3300031543	Soil	MARKSVFVSDLSGKEIAEGRAAQISIKFTDARKGTYVLDVTEEEAEELGRKGHKQARRGRKPKGRGSKPIQDVGAGVAT
Ga0318534_102835492	3300031544	Soil	MARKMIHISDLSGAQIPEGSGATITIKFVDARKGQYVLDVSDSEGEELGRKGRKQARRGRRPKAAA
Ga0318521_108868552	3300031770	Soil	QSEERIGKTSKLRRAGMAKRTIHIYDLSGAQIPEGSGATITIKFADARKGQYVLDVSDSEAEELGRKGRKQARRGRKPKAA
Ga0318576_105318812	3300031796	Soil	MARKMIHISDLSGAQIPEGSGATITIKFVDARKGQYVLDVSDSEGEELGRKGRKQARRGRRPK
Ga0306919_114079791	3300031879	Soil	MAKRTIHIYDLSGAQIPEGSGATITIKFADARKGQYVLDVSDSEAEELGRKGRKQARRGR
Ga0306923_108928091	3300031910	Soil	MAKKTVHISDLSGAEIPEGSGATITIKFVDARKGQYVLDVSDSEGEELGRKGRKQARRGRRPKAAA
Ga0310916_107552862	3300031942	Soil	MAKRTIHIYDLSGAQIPEGSGATITIKFADARKGQYVLDVSDSEAEELGRKGRKQARRGRKPKAA
Ga0310909_109472162	3300031947	Soil	MARKMIHISDLSGAQIPEGSGATITIKFVDARKGQYVLDVSDSEGEELGRKGRKQA
Ga0306926_104423121	3300031954	Soil	MAKKTVHISDLSGAEIPEGSGATITIKFVDARKGQYVLDVSDSEAEELGGKGRKQARRGRRPKAAA
Ga0318553_103622762	3300032068	Soil	KKTVHISDLSGAEIPEGSGATITIKFADARKGQYVLDVSDSEAEEWGRKGRKQARRGRRPKAAA
Ga0311301_106702091	3300032160	Peatlands Soil	IHISDMSGKQIAEGKSATISIKFSDARKGTYVLDVTEAEAEELGSKGRKQARRGRKPKAA
Ga0311301_115736902	3300032160	Peatlands Soil	MARKTIFVSDLSGEPIEEGKAAQISIKFTDARKGTYVLDVTEAEAEELGQKGRKQARRGRKPKVS
Ga0311301_120074361	3300032160	Peatlands Soil	MAKKTIHISDLSGKEVPEGKSATISIKFTDARKGTYVLDVTEAEAEELGEKGRKQARRGRKPKAA
Ga0306920_1002413532	3300032261	Soil	MAKKTVHISDLSGAEIPEGSGATITIKFADARKGQYVLDVSDSEAEEWGRKGRKQARRGRRPKAAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044626

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences