Metagenome Family F044346

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044346
Family Type	Metagenome
Number of Sequences	154
Average Sequence Length	60 residues
Representative Sequence	VSNCDFMAGKSLIDLAASRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGP
Number of Associated Samples	105
Number of Associated Scaffolds	154

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	98.05 %
% of genes from short scaffolds (< 2000 bps)	84.42 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.260 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.260 % of family members)
Environment Ontology (ENVO)	Unclassified (60.390 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (40.909 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 41.86% β-sheet: 0.00% Coil/Unstructured: 58.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 154 Family Scaffolds
PF04392	ABC_sub_bind	72.73
PF03401	TctC	5.19
PF01925	TauE	0.65
PF10503	Esterase_PHB	0.65
PF07883	Cupin_2	0.65
PF13302	Acetyltransf_3	0.65
PF01494	FAD_binding_3	0.65
PF02371	Transposase_20	0.65
PF05572	Peptidase_M43	0.65
PF12728	HTH_17	0.65
PF14534	DUF4440	0.65
PF00589	Phage_integrase	0.65

COG ID	Name	Functional Category	% Frequency in 154 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	72.73
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	5.19
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.30
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.65
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.65
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.65
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.65
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.26 %
Unclassified	root	N/A	9.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.26 %
Unclassified	root	N/A	9.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.26 %
Unclassified	root	N/A	9.74 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	58.44 %
Unclassified	root	N/A	9.74 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.65 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	52.60 %
Unclassified	root	N/A	9.74 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	33.12 %
Unclassified	root	N/A	9.74 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.90 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.65 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.65 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	27.92 %
Unclassified	root	N/A	9.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.90 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.65 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.65 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.65 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	27.92 %
Unclassified	root	N/A	9.74 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.90 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.65 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.65 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.74 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	7.14 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.90 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.30 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.30 %
Bremerella	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Bremerella	0.65 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.65 %
Bradyrhizobium uaiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium uaiense	0.65 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.65 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.74 %
Bradyrhizobium sp. 6(2017)	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 6(2017)	6.49 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.90 %
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.30 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.30 %
Bremerella volcania	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Bremerella → Bremerella volcania	0.65 %
Rhodoplanes sp. JGI PP 4-B12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	0.65 %
Bradyrhizobium sp. JYMT SZCCT0428	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0428	0.65 %
Bradyrhizobium uaiense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium uaiense	0.65 %
Bradyrhizobium tropiciagri	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	0.65 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004153\|Ga0063455_100254257	Not Available	923	Open in IMG/M
3300005332\|Ga0066388_100859354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1491	Open in IMG/M
3300005445\|Ga0070708_101289409	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300005468\|Ga0070707_100882668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	859	Open in IMG/M
3300005764\|Ga0066903_101033508	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Bremerella → Bremerella volcania	1506	Open in IMG/M
3300005764\|Ga0066903_102162124	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300005764\|Ga0066903_104100124	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300005764\|Ga0066903_104366611	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300006051\|Ga0075364_10329863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1039	Open in IMG/M
3300006845\|Ga0075421_102280006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0428	569	Open in IMG/M
3300006845\|Ga0075421_102732788	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300006847\|Ga0075431_101737450	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300009100\|Ga0075418_12732297	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300009156\|Ga0111538_13545186	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300010046\|Ga0126384_10556135	All Organisms → cellular organisms → Bacteria → Proteobacteria	998	Open in IMG/M
3300010046\|Ga0126384_11634153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300010048\|Ga0126373_12074664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	631	Open in IMG/M
3300010359\|Ga0126376_12265863	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300010360\|Ga0126372_10505567	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300010360\|Ga0126372_13318656	Not Available	501	Open in IMG/M
3300010361\|Ga0126378_11625741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium tropiciagri	734	Open in IMG/M
3300010366\|Ga0126379_10451211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1347	Open in IMG/M
3300010366\|Ga0126379_10741440	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300010376\|Ga0126381_102933610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	679	Open in IMG/M
3300010398\|Ga0126383_10438122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1353	Open in IMG/M
3300012201\|Ga0137365_10584443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	819	Open in IMG/M
3300012205\|Ga0137362_11113754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	671	Open in IMG/M
3300012350\|Ga0137372_10249642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1396	Open in IMG/M
3300012354\|Ga0137366_10215761	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300012355\|Ga0137369_10372536	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300012360\|Ga0137375_10014808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9160	Open in IMG/M
3300012361\|Ga0137360_10572277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	966	Open in IMG/M
3300012362\|Ga0137361_10677765	All Organisms → cellular organisms → Bacteria → Proteobacteria	943	Open in IMG/M
3300012582\|Ga0137358_10182539	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300012923\|Ga0137359_11551490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300012948\|Ga0126375_10165516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1412	Open in IMG/M
3300012971\|Ga0126369_12632778	Not Available	587	Open in IMG/M
3300012971\|Ga0126369_12856045	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300015374\|Ga0132255_100533643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1728	Open in IMG/M
3300016270\|Ga0182036_10262464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1298	Open in IMG/M
3300016294\|Ga0182041_10044766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 6(2017)	2952	Open in IMG/M
3300016294\|Ga0182041_10421797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1140	Open in IMG/M
3300016319\|Ga0182033_11405457	All Organisms → cellular organisms → Bacteria → Proteobacteria	628	Open in IMG/M
3300016319\|Ga0182033_11506722	Not Available	607	Open in IMG/M
3300016357\|Ga0182032_10314866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1240	Open in IMG/M
3300016371\|Ga0182034_11009161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	719	Open in IMG/M
3300016387\|Ga0182040_10442283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1029	Open in IMG/M
3300016422\|Ga0182039_10039554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3117	Open in IMG/M
3300016422\|Ga0182039_11132615	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300017970\|Ga0187783_10227208	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300018028\|Ga0184608_10265156	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300018031\|Ga0184634_10268473	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300018061\|Ga0184619_10273744	Not Available	775	Open in IMG/M
3300018072\|Ga0184635_10209951	Not Available	775	Open in IMG/M
3300018074\|Ga0184640_10253622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	798	Open in IMG/M
3300019789\|Ga0137408_1365879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6116	Open in IMG/M
3300019890\|Ga0193728_1100545	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300020005\|Ga0193697_1104264	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300021078\|Ga0210381_10027175	All Organisms → cellular organisms → Bacteria	1579	Open in IMG/M
3300021404\|Ga0210389_10733917	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300025910\|Ga0207684_10091676	All Organisms → cellular organisms → Bacteria	2590	Open in IMG/M
3300025939\|Ga0207665_10501160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	938	Open in IMG/M
3300026515\|Ga0257158_1113490	Not Available	541	Open in IMG/M
3300027874\|Ga0209465_10215474	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300027874\|Ga0209465_10219824	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300028791\|Ga0307290_10016793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2520	Open in IMG/M
3300028819\|Ga0307296_10138182	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300028876\|Ga0307286_10243059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium uaiense	658	Open in IMG/M
3300031231\|Ga0170824_100064568	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300031543\|Ga0318516_10097512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1658	Open in IMG/M
3300031564\|Ga0318573_10302376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	856	Open in IMG/M
3300031573\|Ga0310915_10005059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12	7294	Open in IMG/M
3300031573\|Ga0310915_10106850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1897	Open in IMG/M
3300031573\|Ga0310915_10186306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1447	Open in IMG/M
3300031573\|Ga0310915_10638416	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300031668\|Ga0318542_10071596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 6(2017)	1623	Open in IMG/M
3300031679\|Ga0318561_10132639	Not Available	1330	Open in IMG/M
3300031679\|Ga0318561_10138188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 6(2017)	1303	Open in IMG/M
3300031679\|Ga0318561_10166232	Not Available	1189	Open in IMG/M
3300031679\|Ga0318561_10550519	All Organisms → cellular organisms → Bacteria → Proteobacteria	635	Open in IMG/M
3300031680\|Ga0318574_10666659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	610	Open in IMG/M
3300031680\|Ga0318574_10801907	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300031719\|Ga0306917_11381498	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300031724\|Ga0318500_10124684	Not Available	1193	Open in IMG/M
3300031736\|Ga0318501_10729408	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300031740\|Ga0307468_100372314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1076	Open in IMG/M
3300031744\|Ga0306918_10201542	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300031744\|Ga0306918_10318563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1201	Open in IMG/M
3300031747\|Ga0318502_10023324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 6(2017)	3032	Open in IMG/M
3300031751\|Ga0318494_10431368	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300031763\|Ga0318537_10039929	All Organisms → cellular organisms → Bacteria	1686	Open in IMG/M
3300031765\|Ga0318554_10100852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 6(2017)	1622	Open in IMG/M
3300031768\|Ga0318509_10808422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300031780\|Ga0318508_1053416	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300031792\|Ga0318529_10018101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 6(2017)	2766	Open in IMG/M
3300031792\|Ga0318529_10022669	All Organisms → cellular organisms → Bacteria	2523	Open in IMG/M
3300031792\|Ga0318529_10566149	Not Available	527	Open in IMG/M
3300031794\|Ga0318503_10209444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300031819\|Ga0318568_10306727	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300031833\|Ga0310917_10022945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3606	Open in IMG/M
3300031833\|Ga0310917_10166140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1463	Open in IMG/M
3300031833\|Ga0310917_10234838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1232	Open in IMG/M
3300031835\|Ga0318517_10052805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1706	Open in IMG/M
3300031860\|Ga0318495_10078189	All Organisms → cellular organisms → Bacteria → Proteobacteria	1478	Open in IMG/M
3300031860\|Ga0318495_10532213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300031879\|Ga0306919_10045622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 6(2017)	2868	Open in IMG/M
3300031879\|Ga0306919_11133664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	595	Open in IMG/M
3300031890\|Ga0306925_10016368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7303	Open in IMG/M
3300031890\|Ga0306925_10092271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3216	Open in IMG/M
3300031890\|Ga0306925_10289028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1764	Open in IMG/M
3300031890\|Ga0306925_10485972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1316	Open in IMG/M
3300031890\|Ga0306925_12110497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	527	Open in IMG/M
3300031893\|Ga0318536_10170918	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300031894\|Ga0318522_10250387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	671	Open in IMG/M
3300031897\|Ga0318520_10230709	Not Available	1100	Open in IMG/M
3300031897\|Ga0318520_10257147	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300031910\|Ga0306923_10165677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2524	Open in IMG/M
3300031910\|Ga0306923_10787096	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300031910\|Ga0306923_11388114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	740	Open in IMG/M
3300031912\|Ga0306921_10681989	Not Available	1182	Open in IMG/M
3300031942\|Ga0310916_10060644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 6(2017)	2925	Open in IMG/M
3300031945\|Ga0310913_10021311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4036	Open in IMG/M
3300031945\|Ga0310913_10820611	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300031945\|Ga0310913_11214780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300031954\|Ga0306926_10328578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1891	Open in IMG/M
3300031954\|Ga0306926_10337782	All Organisms → cellular organisms → Bacteria	1863	Open in IMG/M
3300032001\|Ga0306922_10119519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 6(2017)	2801	Open in IMG/M
3300032001\|Ga0306922_10658516	Not Available	1105	Open in IMG/M
3300032042\|Ga0318545_10046777	All Organisms → cellular organisms → Bacteria → Proteobacteria	1457	Open in IMG/M
3300032052\|Ga0318506_10245016	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300032055\|Ga0318575_10294304	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300032059\|Ga0318533_10015590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4699	Open in IMG/M
3300032059\|Ga0318533_10138309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1716	Open in IMG/M
3300032059\|Ga0318533_10148647	All Organisms → cellular organisms → Bacteria	1656	Open in IMG/M
3300032059\|Ga0318533_10149958	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1649	Open in IMG/M
3300032059\|Ga0318533_10329877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1109	Open in IMG/M
3300032059\|Ga0318533_10836318	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300032064\|Ga0318510_10534008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300032065\|Ga0318513_10231281	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300032076\|Ga0306924_10345440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1706	Open in IMG/M
3300032076\|Ga0306924_10642114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1197	Open in IMG/M
3300032090\|Ga0318518_10014945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 6(2017)	3310	Open in IMG/M
3300032091\|Ga0318577_10319554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	742	Open in IMG/M
3300032094\|Ga0318540_10024904	All Organisms → cellular organisms → Bacteria	2536	Open in IMG/M
3300032180\|Ga0307471_102145547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	703	Open in IMG/M
3300032261\|Ga0306920_100128588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3769	Open in IMG/M
3300032261\|Ga0306920_100301028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2388	Open in IMG/M
3300032261\|Ga0306920_104173197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300033289\|Ga0310914_10375806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1285	Open in IMG/M
3300033289\|Ga0310914_10432158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1192	Open in IMG/M
3300033289\|Ga0310914_11148318	All Organisms → cellular organisms → Bacteria → Proteobacteria	678	Open in IMG/M
3300033289\|Ga0310914_11657534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300033289\|Ga0310914_11789852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	518	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.45%
Host-Associated	Host-Associated	4.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.56%
Plants	Host-Associated → Plants	4.55%
Aquatic	Environmental → Aquatic	3.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.56%
Sediment	Environmental → Aquatic → Sediment	3.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.25%
Freshwater	Environmental → Aquatic → Freshwater	0.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.65%
Roots	Host-Associated → Plants → Roots	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.12%
Loam	Environmental → Terrestrial → Soil → Loam	7.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.25%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.65%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.65%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.09%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.55%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.30%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.65%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.65%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063455_1002542572	3300004153	Soil	MSNCHLVAGRSLIDLVASRLALRAPALRAATALTRPNRSAQRLPCGRRAAPTTV
Ga0066388_1008593543	3300005332	Tropical Forest Soil	MSNCHVVAGQLLIRLAASKLALRAPALRAATALTRPNGSARGLACGRHIVPTG
Ga0070708_1012894092	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSNCHLVAGRSLIDLTASRLALRTPALRAATALTRPNRSAQRLPCGRHAVPTTKTV
Ga0070707_1008826681	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSNCHLVAGRSLIDWTASRLALRTPALRAATALTRPNRSAQRLPCGRHAVPTT
Ga0066903_1010335084	3300005764	Tropical Forest Soil	VSNCDLIAAKSLIDLVASRLALRAPARRAASALTRPKRSAQRLSCGRHAVSTAVVVDPFDVVDCANREHL
Ga0066903_1021621241	3300005764	Tropical Forest Soil	MSNCHLVAGRSLIDLAASRLALRDPALRAAKTRPNRSAQRLPCGRHAVPTTKTVGPSDVVANH
Ga0066903_1041001241	3300005764	Tropical Forest Soil	MSNCHVAAGRSLIDLVASRLALRAPALRAATALTRPNQSAQWLPCGRHTVPTGKM
Ga0066903_1043666112	3300005764	Tropical Forest Soil	MSNCDFVAGRSLIDLVASRLALRAPALRAASTLTPPNQSAQWLPSGRHGAPTVKVVGPNDVITNHGIE
Ga0075364_103298631	3300006051	Populus Endosphere	MSNCHLVAGRSLIDLVASRLALRAPAQRAATALTRPNRSVPRLPCGRHNVPTAV
Ga0075421_1022800061	3300006845	Populus Rhizosphere	MSNCDLVAATSLIHLAASRLALRAPALRAATVLTRPDGSARWLPCGRHGVLTAVTVGPNDVVTNHCVERGDH
Ga0075421_1027327882	3300006845	Populus Rhizosphere	MSNCHLVAGRSLIDLVASRLALRVPAQRAATALTRPNRSVPRLPRGRHNVPTAVTVGPNDIVA
Ga0075431_1017374502	3300006847	Populus Rhizosphere	MSNCDLVAATSLIHLATSRLALRAPALRAAAALTRPDGSAQGLPCGRHGVPTAVTVGPNDVVTN
Ga0075418_127322971	3300009100	Populus Rhizosphere	MSNCHVVAGQLLIDLVASRLALRAPALRAATALTRPNGSARGLACGRHN
Ga0111538_135451862	3300009156	Populus Rhizosphere	VSNCDLVAGGSLIHFGASRLALRAPALRAATALTRPNESARGLACGRHVVPTGRAVGPNDVVANHR
Ga0126384_105561353	3300010046	Tropical Forest Soil	MSNCHLVAGRSLIDLAASRLALRAPAPRAATALTRPNRSAQRLPCGRHAVPTTKTVG
Ga0126384_116341532	3300010046	Tropical Forest Soil	MSNCHLVAGRSLIDLAASRLALRAPALRAATALTRPDRSAQRLPCGRHAVPTTKTVGPSDVVAN
Ga0126373_120746641	3300010048	Tropical Forest Soil	MSNCDFVAGRSLIDLVASRLALRAPALRAASTLTPPNQSAQWLPSGRHGAPTVKVVGPNDVITNHGI
Ga0126376_122658631	3300010359	Tropical Forest Soil	MSNCDFVAGRSLIDLVASRLALRAPALGAATALTRPNQSAQWLPSGRHNVPTVKMVG
Ga0126372_105055672	3300010360	Tropical Forest Soil	MSNCDFVAGRSLIDLVASRLALRAPALRAASTLTPPNQSAQWLPSGRHGAPTVKVVGPNDVIT
Ga0126372_133186562	3300010360	Tropical Forest Soil	MSNCDFVAGGSLIDLLASRLALRAPALRAASALTRPNQSAQWLPCGRHSVPTGKMVG
Ga0126378_116257412	3300010361	Tropical Forest Soil	MSNCDFVAGRSLIDLVASRLALRAPALGAATALTRPNQSAQWQSSGRHNVPTVKMVGPN
Ga0126379_104512111	3300010366	Tropical Forest Soil	MSNCHLVAGRSLIDLTASRLALRAPALRAATALTRPNRSAQRLPCGRHA
Ga0126379_107414402	3300010366	Tropical Forest Soil	MINCDFVAGRSLIDLVTSRLALRAPALSAASALTRPNQSAQWLSSGRYNVPTVKMVGPNNVITN
Ga0126381_1029336102	3300010376	Tropical Forest Soil	VSNCDFMAAKSLIDLATSRLALRAPALRAATALTRPNQSAQRRPRGRHAVPTTMTVGPKHVIANDRVERG
Ga0126383_104381221	3300010398	Tropical Forest Soil	MSNCHLVAGRSLIDLAASRLALRAPALRAATALTRPDRSAQRLPCGRHAV
Ga0137365_105844433	3300012201	Vadose Zone Soil	VSNCHLVAARSLIDLVASRLALRAPALRAATALTRPSRSARRLPCGRQNVPTAKTVGPNNVVAN
Ga0137362_111137541	3300012205	Vadose Zone Soil	MSNCHLVAGRSLIDLAASRLALRAPALRAATALTRPNRSAQRLPCGRHAVPTTKTVGPSDVVAN
Ga0137372_102496423	3300012350	Vadose Zone Soil	MSNCHLVAGRSLIDLAASRLALRAPALRAATALTRPNRSAQRLPCGRRAAPTAVTV
Ga0137366_102157611	3300012354	Vadose Zone Soil	MSNCHLVAGRSLIDLAASRLALRAPALRAATALTRPNRSAQRLPCGRRAAPTAVTVDPS
Ga0137369_103725362	3300012355	Vadose Zone Soil	MSNCDFVAAKSLIDSAASRLAFRAPALRAATALTRPNRSAQRLPYGRHAVPTAMMVGPNIVITNHRIERGDHF
Ga0137375_1001480813	3300012360	Vadose Zone Soil	MSNCHLVAARSLIDLVASRLALRAPALRAATALTRPSRSAQRLPCGRQNMPTA
Ga0137360_105722771	3300012361	Vadose Zone Soil	MSNCHLVAGRSLIDLVASRLGLRAPALRAATALTRPNRSAQRLPCGRRTAPTAVTVDPSR
Ga0137361_106777652	3300012362	Vadose Zone Soil	MSNCHLVAGRSLIDLTASRLALRAPALRAATALTRPNRSAQRLPCGRHAV
Ga0137358_101825393	3300012582	Vadose Zone Soil	MSNCHLVAGRSLIDLTASRLALRTPALRAATALTRPNRSAQRLPCGRHAVPTTKTVG
Ga0137359_115514902	3300012923	Vadose Zone Soil	MSNCHLVAGRSLIDLAASRLALRAPALRAATALTRPNRSAQRLPCGRHAVPTTKTV
Ga0126375_101655163	3300012948	Tropical Forest Soil	MSNCHLVAGRSLIDLAASRLALRAPALRAATALTRPDRSAQRLPCGRHAVPTTKTVGPSDVVANHRIKCRDH
Ga0126369_126327781	3300012971	Tropical Forest Soil	VSNCDFVAWGSLIDLATSRLPLRAPALRAALTRPNRSAQRLPCGRHAVPTTKTVGPSNVVANHRIEC
Ga0126369_128560451	3300012971	Tropical Forest Soil	MSNCDLVAGRSLIALAASRLALGAPALRAATALTRPNRSAQWLPCGRHGVPTAVTVG
Ga0132255_1005336433	3300015374	Arabidopsis Rhizosphere	MSNCHLVAARSLIDLAASRLALRAPALRAATALTRPSRSAQRLPCGRQ
Ga0182036_102624642	3300016270	Soil	MSNCDFVAGRSLIDSVASKLALRAPALRAASALTRPNQPAQWLPCGRHSVPTA
Ga0182041_100447661	3300016294	Soil	VSNCDFMAAKSLIDLAASRLALRAPALRAATALTQPNQSAQRLPRGRHAVPTAMTVGPKHVIANDRVER
Ga0182041_104217973	3300016294	Soil	MSNCHLVAGRSLIDLAASRLALRAPAQRAATALTRPNRSAQRLPCGRHAVPTTKTVGPSDVVANHRIK
Ga0182033_114054572	3300016319	Soil	MSNCHVAAGGSLIDLVASRLALRAPALRAAMAFQPNQSAQWLPCGRHTVPTGKMVGPNNV
Ga0182033_115067221	3300016319	Soil	MVFLGSNCHLAAGRSLIDLAASRLALRAPALRAATALTRPNRSAQRLPCGRHAVPTTKTVGPSDVVANHRIK
Ga0182032_103148662	3300016357	Soil	VSNCDFMAAKSLIDLATSRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVG
Ga0182034_110091611	3300016371	Soil	VSNCDLVAARSLIDLVASRLALRAPARRAATALTRPKRSAQRLSCGRHAVSTAVVVDPFDVVD
Ga0182040_104422831	3300016387	Soil	VSNCHVVAGRSLIDLVASRLALRAPALRAATALTQPNQSAQWLPCGRHTVPTGKMVGPNN
Ga0182039_100395544	3300016422	Soil	MSNCDFMAGKSLIDLAALRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGP
Ga0182039_111326152	3300016422	Soil	MSNCHLVAGRSLIDLAASRLALRAPALPAATALTRPKRSAQRLPCGRHAVPTTKTVGPSDVVANHR
Ga0187783_102272081	3300017970	Tropical Peatland	MSNCDFVAGRSLIALVASRLALRAPARRAASALTPPNQSAQWLPSGRHGVPTVKVVGPNDVITNHG
Ga0184608_102651563	3300018028	Groundwater Sediment	MSNCDFVAGGSLIDLVTSRLALRAPALRAATALTRPNRSAQRLPCGRHSAPTAATVGP
Ga0184634_102684733	3300018031	Groundwater Sediment	MSNCDFVAGGSLIDLVTSRLALRAPALRAATALTRPNRSAQRLPCGRHSAPTAATVGPNDVIDCAK
Ga0184619_102737441	3300018061	Groundwater Sediment	MEFLGSNCDLVAARSLIDLVASRLALGAPVLRAATALTRPNRPAQRLPCGRHGVPTAVTAGSNDVVNSAKREH
Ga0184635_102099512	3300018072	Groundwater Sediment	MSNCDFVAGGSLIDLVTSRLALRAPALRAATALTRPNRSAQRLPCGRHSAPTA
Ga0184640_102536222	3300018074	Groundwater Sediment	MSNCDLVAARSLIDLATSRLALRAPAPCAATALTRPNRPAQRLPCGRHGVPTAVT
Ga0137408_13658792	3300019789	Vadose Zone Soil	MSNCHLVAGRSLSDLVASRLALRAPALRAATALTRPNRSAQRLPCGRRAAPTAVTVDPSRTVAEHGV
Ga0193728_11005453	3300019890	Soil	MSNCDLVAARSLIDLATSRLALRAPALRAATALTRPNRPAQRLPCGRHGV
Ga0193697_11042641	3300020005	Soil	VSNCHRVAGGSLIDLAASRLALRAPALRAAATLTRLNRSAQRLPCGQHAVP
Ga0210381_100271751	3300021078	Groundwater Sediment	MSNCDLVAARSLIDLAASRLALRTPALRAATASTRPNRSAQQLPCGRHGVPTAVTAGPN
Ga0210389_107339171	3300021404	Soil	MSNCDFVAGRSRIDLVTSRLSHRALALCAVSALTRPNQSVQRLPRQLTVKEVGPH
Ga0207684_100916764	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSNCHLVAGRSLIDLTASRLALRAPALRAATALTRPNRSAQRLPCGRHAVPTTKTVGPSDVVANHRIKCRDHL
Ga0207665_105011602	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSNCHIVAGRSLIDWAASRLALRAPALRAATALTLPNRSAQRLACRQHTVPTA
Ga0257158_11134901	3300026515	Soil	MSNCHFVAGGSQIDLAASRLALRAPARRAATALTRPNRSAQRLPCSRHVMPTANTVGPND
Ga0209465_102154742	3300027874	Tropical Forest Soil	VSNCDFMTAKSLIDLPTSRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMRVGPKHVIAN
Ga0209465_102198241	3300027874	Tropical Forest Soil	VSNCDFMAGKSLIDLAASRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAM
Ga0307290_100167931	3300028791	Soil	MSNCDRVAARSLIDLAASRLALRTPALRAATASTRPNRSAQRLPCGRHGVPTAVTAGPNDVVNSAKREL
Ga0307296_101381824	3300028819	Soil	MSNCDLVAARSLIDLAASRLALRTPALRAATASTRPNRSAQQLPCGGHGVPTAVTAGP
Ga0307286_102430592	3300028876	Soil	MSNCDLVAARSLIDLAASRLALRTPALRAATASTRPNRSAQQLPCGRHGVPTAVTAGPNDVVNSAKRELLHTPS
Ga0170824_1000645682	3300031231	Forest Soil	MSNCHVAAGRSLIDLAASRLALRAPALRAATALTRPNQSAQWLPCGRHTVPTGKMVGPNNVVAN
Ga0318516_100975121	3300031543	Soil	MSNCHLVAARSLIDLAASRLALRAPALRAATVLTRPNRSAQRLPCGRHTVPTAMTIGPNNIVTNHC
Ga0318573_103023762	3300031564	Soil	VSNCDFMAAKSLIDLATSRLALRAPALRAATALTRPNQSTQRLPRGRHAVPTAMTVGPK
Ga0310915_100050591	3300031573	Soil	MSNCDFMAAKSLIDLATSRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGP
Ga0310915_101068503	3300031573	Soil	MSNCDFMAAKSLIDLATSRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAM
Ga0310915_101863063	3300031573	Soil	MAAKSLIDLAASGLALRVPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGPKHVIAN
Ga0310915_106384161	3300031573	Soil	VSNCDFMAGKSLIDLAALRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGPKH
Ga0318542_100715961	3300031668	Soil	VSNCDFMAAKSLIDLAASRLALRAPALRAATALTQPNQSAQRLPRGRHAVPTAMT
Ga0318561_101326392	3300031679	Soil	MSNRDFVAGGSLIALAASRLALRAPALRAATALTRPNRPAQRLPCGRHALPTAQ
Ga0318561_101381885	3300031679	Soil	VSNCDFMAAKSLIDLAASRLALRAPALRAATALTQPNQSAQRLPRGRHAVPTAMTVGPKHVIANDRVE
Ga0318561_101662321	3300031679	Soil	MSNCNFMAGKSLIDLAALRLALRAPALRAATALTRPNQSAQRLPRGRHAVPT
Ga0318561_105505191	3300031679	Soil	VSNCNLVAGRSLIDLTTSRLALRTPALRAATALTRPNRSAQRLPCGRHAVPTTKTV
Ga0318574_106666592	3300031680	Soil	VSNCDFMAAKSLIDLAASGLALRVPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGPKHVIANDRVERGDH
Ga0318574_108019072	3300031680	Soil	MSNCDFMAAKSLIDLAASRLALRAPALRAATALTQPNQSAQRLPRGRHAVPTAMT
Ga0306917_113814982	3300031719	Soil	VSNCHLVAGRSLIDLAASRLALRAPALRAATALTRPNRSAQRLPCGRHAVPTTKTVRP
Ga0318500_101246841	3300031724	Soil	MSNCHLVAGRSLIDLTASRLALRAPALRAATALTRPNRSAQRLPCGRHAVPTT
Ga0318501_107294081	3300031736	Soil	VSNCNLVAGRSLIDLTTSRLALRTPALRAATALTRPNRSAQRLPCGRHAVPTTKTVGPSDVVANHRIK
Ga0307468_1003723142	3300031740	Hardwood Forest Soil	MSNCHLVAGRSLIDLAASRLALHAPAQRAATALTRPNGSARWLPCGRHGVLTAVTIGPNDVVTNHCVERGDHL
Ga0306918_102015421	3300031744	Soil	VSNCHLVAARSLIDLAASRLALRAPALRAATALTRPKRSAQRLPCGRYTVPTAMTIGPNNIVTNHC
Ga0306918_103185631	3300031744	Soil	VSNCDFMAAKSLIDLATSRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGP
Ga0318502_100233241	3300031747	Soil	MAAKSLIDLAASRLALRAPALRAATALTQPNQSAQRLPRGRHAVPTAMTVGPKHVIANDR
Ga0318494_104313681	3300031751	Soil	VSNCDFMAGKSLIDLAASRLALRAPALRAATALTRPNQSAQRLPRGRHAVLTAM
Ga0318537_100399291	3300031763	Soil	MAGKSLIDLAASRLALRAPALRAATALTRPNQSTQRLPRGRHAVPTAMTVGPKHVIANDR
Ga0318554_101008521	3300031765	Soil	VSNCDFMAAKSLIDLAASRLALRAPALRAATALTRPNQSAQQLPHGRHAVPT
Ga0318509_108084222	3300031768	Soil	MSNCDFMAGKSLIALAASTLALRAPALRAATALTRPNRPAQRLPCGRHAMPTAQT
Ga0318508_10534162	3300031780	Soil	MSNCNFMAGKSLIDLAALRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVG
Ga0318529_100181011	3300031792	Soil	VSNCDFMAAKSLIDLAASRLALRAPALRAATALTQPNQSAQRLPRGRHA
Ga0318529_100226694	3300031792	Soil	MSNCHLVAARSLIDLAASRLALRAPALRAATVLTRPNRSAQRLPCGRHTVPTAMTIGPNNIVTNHCVERG
Ga0318529_105661491	3300031792	Soil	MSNCHLVAGRSLIDLAASRLALRAPALPAATALTRPKRSAQRLPCGRHAVPTTKTVGPSDVVANHRIKC
Ga0318548_100825331	3300031793	Soil	VSNCDFMAAKSLIDLAASRLALRAPALRAATALTQPNQSAQRLPRGRHAVPTAMTVGPKHVIANDRVERGD
Ga0318503_102094442	3300031794	Soil	VSNCHVVAGRSLIDLAASRLALRAPALRAATALTRPNQPAQWLPCGRHTVPTAKMVGPNNVVANHRIERGDH
Ga0318568_103067272	3300031819	Soil	MSNCDFVAGRSLFDLVASRLALRAPALRAASALTRPNQAAQWLASGRHSAPTVEMVGPPNVIANHCVE
Ga0310917_100229451	3300031833	Soil	MSNCDFMAAKSLIDLATSRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVG
Ga0310917_101661401	3300031833	Soil	MAAKSLIDLAASGLALRVPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGPKHV
Ga0310917_102348381	3300031833	Soil	MSNCHVAAGGSLIDLVASRLALRAPALRAAMALTQPNQSAQWLPCGRHTVPTGKMVGPNNVVTNH
Ga0318517_100528053	3300031835	Soil	MSNCHLVAGRSLIDLTASRLALRAPALRAATALTRPNRSAQRLPCGRHAVPT
Ga0318495_100781894	3300031860	Soil	MSNCDFMAGKSLIALAASTLALRAPALRAATALTRPNRPAQRLPCGRHAMPTAQTISPNDVLD
Ga0318495_105322132	3300031860	Soil	MSNCDFMAAKSLIDLAASRLALRAPALRAATALTQPNQSAQRLPRGRHAVPTAM
Ga0306919_100456221	3300031879	Soil	VSNCDFMAGKSLIDLAASRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGPK
Ga0306919_111336641	3300031879	Soil	VSNCDFMAAKSLIDLAASGLALRVPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGPKHVIAN
Ga0306925_1001636813	3300031890	Soil	VSNCDLIAAKSLIDLVASRLALRAPARRAATALTRPKRSAQRLSCGRHAVSTAVVVDPFAVVDCANREHL
Ga0306925_100922714	3300031890	Soil	MSNCDFMAGKSLIDLAALRLALRAPALRAATALTRPNQSAQRLPRGRHA
Ga0306925_102890284	3300031890	Soil	VSNCDFMAAKSLIDLAASRLALRAPALRAATALTRPNQSAQRLPRGRHAVP
Ga0306925_104859724	3300031890	Soil	MAAKSLIDLATSRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGPKHVIAND
Ga0306925_121104972	3300031890	Soil	VSNCDFMAAKSLIDLAASRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGPKHVIANDRVER
Ga0318536_101709181	3300031893	Soil	MSNCDFMAAKSLIDLAASRLALRAPALRAATALTQPNQSAQRLPRGRHAVPTAMTVGPKHVIANDRVER
Ga0318522_102503872	3300031894	Soil	VSNCDFMAAKSLIDLATSRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGPK
Ga0318520_102307093	3300031897	Soil	MAAKSLIDLATSRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGPKHVIANDR
Ga0318520_102571472	3300031897	Soil	MSNCDFMAGKSLIDLAALRLALRAPALRAATALTRPNQSAQRLPRGRHAVLTAMTVGPK
Ga0306923_101656775	3300031910	Soil	MSNCHLVAGRSLIDLAASRLALRAPAQRAATALTRPNRSAQRLPCGRHAVPTTKTVGPSDVVANHRIKC
Ga0306923_107870962	3300031910	Soil	VSNCDLIAAKSLIGLVASRLALRAPALRAATALTRPKRSAQRLSCGRHAVSTVVAV
Ga0306923_113881141	3300031910	Soil	VSNCDFMAGKSLIDLAASRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGP
Ga0306921_106819892	3300031912	Soil	MSNCHLVAGGSLIPLAASRLALRAPALRAATALTRPNRSAQRLPCGRHAVPTTKTVGPSDVVAN
Ga0310916_100606447	3300031942	Soil	VSNCDFMAAKSLIDLAASRLALRAPALRAATALTQPNQSAQRLPRGRHAVPTAMTVGPK
Ga0310913_100213117	3300031945	Soil	MAAKSLIDLAASRLALRAPALRAATALTQPNQSAQRLPRGRHAVPTAMTVGPKHVIANDRVERGD
Ga0310913_108206111	3300031945	Soil	MSNCDFMAAKSLIDLAASRLALRAPALRAATALTQPNQSAQWLPRGRHA
Ga0310913_112147803	3300031945	Soil	MSNCHLVAGRSLIDLVASKLALRAPALRAATALTRPNRSAQRLACRRHTVPTAKTVGPNNVVANHCVER
Ga0306926_103285783	3300031954	Soil	MSNCDFMAAKSLIDLATSRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGPK
Ga0306926_103377822	3300031954	Soil	MSNCHLVAGRSLIDLVASKLALRAPALRAATALTRPNRSAQRLACRRHTVPTAKTVGPNNVVANHCVERGNHLNASPPRS
Ga0306922_101195197	3300032001	Soil	VSNCDFMAAKSLIDLAASRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGPK
Ga0306922_106585161	3300032001	Soil	VSNCDFMAAKSLIDLATSRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGPKHVIANDR
Ga0318545_100467771	3300032042	Soil	MSNCDFVAGGSLIALAASRLALRAPALRAATALTRPNRPAQRLPCGRHALPTAQT
Ga0318506_102450162	3300032052	Soil	VSNCDFMAGKSLIDLAASRLALRAPALRAATALTRPNQSTQRLPRGRHAVPTAMTVGP
Ga0318575_102943041	3300032055	Soil	MSNCDFMAGKSLIDLAALRLALRAPALRAATALTRPNQSAQRLPRGRHAVLTAMT
Ga0318533_100155901	3300032059	Soil	VSNCHLVAARSLIDLAASRVALRAPALRAATALTRPNRSAQRLPCGRYTVPTAMTIGPNN
Ga0318533_101383093	3300032059	Soil	MSNCHLVAGGSLIPLAASRLALRAPALRAATALTRPNRSAQRLPCGRHAVPTTKTVGPSDVVANHRIECR
Ga0318533_101486472	3300032059	Soil	MSNCDFVAGGSLIALATSRLAFRAPALRAATALTRPNRPAQRLPCGRHAMPTAQTIGPNDVL
Ga0318533_101499583	3300032059	Soil	MSNCHLVAGRSLIDLTASRLALRTPALRAATALTRPNRSAQRLPGGRHAVPTTK
Ga0318533_103298771	3300032059	Soil	VSNCDFMAAKSLIDLAASGLALRVPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGPKHVIANDRVER
Ga0318533_108363182	3300032059	Soil	MSNCHVVAGRSLIDLVASRLALRAPALRAAMALTQPNQSAQWLPCGRHTVPTGKMVGPNNVVANHR
Ga0318510_105340081	3300032064	Soil	MSNCDFMAGKSLIALAASTLALRAPALRAATALTRPNRPAQRLPCGRHAMPT
Ga0318513_102312811	3300032065	Soil	MSNCDFMAGKSLIDLAALRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGPK
Ga0306924_103454401	3300032076	Soil	MSNCDFMAGKSLIDLAALRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGPKH
Ga0306924_106421141	3300032076	Soil	VSNCDFMAAKSLIDLATSRLALRAPALRAATALTRPNQSAQQLPRGRHAVPTAMTVG
Ga0318518_100149451	3300032090	Soil	MAAKSLIDLAASRLALRAPALRAATALTQPNQSAQRLPRGRHAVPTAMTVGPK
Ga0318577_103195542	3300032091	Soil	MSNCHLVAARSLIDLAASRLALRAPALRAATALTRPNRSAQRLPCGRYTVPTAMTIGPNN
Ga0318540_100249041	3300032094	Soil	MSNCHLVAARSLIDLAASRLALRAPALRAATVLTRPNRSAQRLPCGRHTVPTAMTIGPNNIVTNHCVERGDHLTH
Ga0307471_1021455472	3300032180	Hardwood Forest Soil	MSNCDFVAGRSLIDLVASRLALRAPALGAASALTRPNQSAQWLPSGRRGLPTVKVVGPNDVI
Ga0306920_1001285887	3300032261	Soil	MSNCHLVAGRSPIDLAASRLALRAPALRAATALTRPNRSAQRLPCGRHAVPTTK
Ga0306920_1003010284	3300032261	Soil	MSNCHLVAGGSLIPLAASRLALRAPALRAATALTRPNRSAQRLPCGRHAVPTTKTVGPSDVVANHRIE
Ga0306920_1041731971	3300032261	Soil	VSNCDFMAAKSLIDLAASRLALRAPALRAATALTRPNQSAQRLPRGRHAVPTAMTVGP
Ga0310914_103758063	3300033289	Soil	VSNCDFMAAKSLIDLATSRLALRAPALRAATALTRPNQSTQRLPRGRHAVPTAMTVGP
Ga0310914_104321581	3300033289	Soil	MSNCHVAAGRSLIDLVASRLALRAPALRAATALTRPNQSAQWLPYGRHTVPTGKMVGPKNVVANHRIERG
Ga0310914_111483181	3300033289	Soil	VSNCNLVAGRSLIDLTTSRLALRTPALRAATALTRPNRSAQRLPCGRHAVPTTKTVGPSDVVANHRIKCR
Ga0310914_116575341	3300033289	Soil	MSNCDFVAARSLIDLAASRLALRTPALRAATASTRPNRSAQQLPSGRHGVPTVVTADPNDVVNSAKRE
Ga0310914_117898521	3300033289	Soil	VSNCHFAAGRSLIDLAASRLALRAPALRAATALTRPNQSAQWLPCGRHTVPTGKMVG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F044346

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences