Metagenome / Metatranscriptome Family F044248

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044248
Family Type	Metagenome / Metatranscriptome
Number of Sequences	154
Average Sequence Length	62 residues
Representative Sequence	LKVVIVLAFHSLGHSVAPLEAESSTERPLSVRAAMICIVTLSALGWTAILLPLWAIAQ
Number of Associated Samples	99
Number of Associated Scaffolds	154

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	25.49 %
% of genes near scaffold ends (potentially truncated)	40.26 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.727 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (46.753 % of family members)
Environment Ontology (ENVO)	Unclassified (60.390 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (55.195 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.30% β-sheet: 0.00% Coil/Unstructured: 40.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 154 Family Scaffolds
PF00903	Glyoxalase	33.77
PF04909	Amidohydro_2	16.88
PF06146	PsiE	7.14
PF01042	Ribonuc_L-PSP	3.25
PF07992	Pyr_redox_2	1.95
PF00571	CBS	1.30
PF12681	Glyoxalase_2	1.30
PF13356	Arm-DNA-bind_3	0.65
PF16952	Gln-synt_N_2	0.65
PF06258	Mito_fiss_Elm1	0.65
PF00988	CPSase_sm_chain	0.65
PF10396	TrmE_N	0.65

COG ID	Name	Functional Category	% Frequency in 154 Family Scaffolds
COG3223	Phosphate starvation-inducible membrane PsiE (function unknown)	General function prediction only [R]	7.14
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	3.25
COG0505	Carbamoylphosphate synthase small subunit	Amino acid transport and metabolism [E]	1.30
COG3660	Mitochondrial fission protein ELM1	Cell cycle control, cell division, chromosome partitioning [D]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.73 %
Unclassified	root	N/A	27.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.73 %
Unclassified	root	N/A	27.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.73 %
Unclassified	root	N/A	27.27 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	64.29 %
Unclassified	root	N/A	27.27 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.65 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	55.19 %
Unclassified	root	N/A	27.27 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.30 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.19 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.30 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	3.90 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.30 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.30 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.65 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.30 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.30 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.65 %
Siccirubricoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Siccirubricoccus	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.27 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	3.90 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.30 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.30 %
Siccirubricoccus deserti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Siccirubricoccus → Siccirubricoccus deserti	0.65 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003218\|JGI26339J46600_10019187	All Organisms → cellular organisms → Bacteria	1986	Open in IMG/M
3300003219\|JGI26341J46601_10079674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	980	Open in IMG/M
3300004080\|Ga0062385_11294028	Not Available	502	Open in IMG/M
3300004082\|Ga0062384_100089670	All Organisms → cellular organisms → Bacteria	1617	Open in IMG/M
3300004152\|Ga0062386_100149271	All Organisms → cellular organisms → Bacteria → Proteobacteria	1823	Open in IMG/M
3300004633\|Ga0066395_10163521	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300005363\|Ga0008090_13524767	Not Available	708	Open in IMG/M
3300005363\|Ga0008090_14565942	Not Available	603	Open in IMG/M
3300010046\|Ga0126384_10016627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4684	Open in IMG/M
3300010048\|Ga0126373_11190580	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300010048\|Ga0126373_11645665	Not Available	706	Open in IMG/M
3300010048\|Ga0126373_11811635	Not Available	674	Open in IMG/M
3300010360\|Ga0126372_11023505	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300010360\|Ga0126372_13198128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	509	Open in IMG/M
3300010361\|Ga0126378_10580158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1236	Open in IMG/M
3300010361\|Ga0126378_12366647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300010366\|Ga0126379_10886855	Not Available	994	Open in IMG/M
3300010366\|Ga0126379_12298648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300010376\|Ga0126381_100800262	Not Available	1353	Open in IMG/M
3300010376\|Ga0126381_101526276	Not Available	965	Open in IMG/M
3300010376\|Ga0126381_103841235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300016270\|Ga0182036_10329984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1170	Open in IMG/M
3300016270\|Ga0182036_10543039	All Organisms → cellular organisms → Bacteria → Proteobacteria	926	Open in IMG/M
3300016294\|Ga0182041_10040526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3073	Open in IMG/M
3300016294\|Ga0182041_10090553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2216	Open in IMG/M
3300016294\|Ga0182041_10984984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	761	Open in IMG/M
3300016294\|Ga0182041_11129714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	712	Open in IMG/M
3300016294\|Ga0182041_11455168	Not Available	630	Open in IMG/M
3300016341\|Ga0182035_10293556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1330	Open in IMG/M
3300016341\|Ga0182035_10374028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1190	Open in IMG/M
3300016357\|Ga0182032_10017412	All Organisms → cellular organisms → Bacteria	4095	Open in IMG/M
3300016357\|Ga0182032_11699782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	550	Open in IMG/M
3300016387\|Ga0182040_10310009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1210	Open in IMG/M
3300016387\|Ga0182040_10934083	Not Available	721	Open in IMG/M
3300016422\|Ga0182039_10296634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1337	Open in IMG/M
3300016445\|Ga0182038_10039084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3069	Open in IMG/M
3300017823\|Ga0187818_10568090	Not Available	512	Open in IMG/M
3300018060\|Ga0187765_10234059	Not Available	1075	Open in IMG/M
3300020579\|Ga0210407_10149305	All Organisms → cellular organisms → Bacteria → Proteobacteria	1801	Open in IMG/M
3300020579\|Ga0210407_10795785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	729	Open in IMG/M
3300020580\|Ga0210403_10307257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1299	Open in IMG/M
3300020581\|Ga0210399_10751758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	799	Open in IMG/M
3300020581\|Ga0210399_11074653	Not Available	645	Open in IMG/M
3300021372\|Ga0213877_10249699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	589	Open in IMG/M
3300021439\|Ga0213879_10065870	All Organisms → cellular organisms → Bacteria → Proteobacteria	979	Open in IMG/M
3300021476\|Ga0187846_10009068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4863	Open in IMG/M
3300021476\|Ga0187846_10043552	All Organisms → cellular organisms → Bacteria → Proteobacteria	2001	Open in IMG/M
3300021476\|Ga0187846_10174925	Not Available	904	Open in IMG/M
3300021478\|Ga0210402_10957054	Not Available	783	Open in IMG/M
3300021560\|Ga0126371_10074571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3310	Open in IMG/M
3300021560\|Ga0126371_10351771	All Organisms → cellular organisms → Bacteria → Proteobacteria	1609	Open in IMG/M
3300027698\|Ga0209446_1000873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6986	Open in IMG/M
3300027729\|Ga0209248_10045784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1347	Open in IMG/M
3300027783\|Ga0209448_10028549	All Organisms → cellular organisms → Bacteria → Proteobacteria	1858	Open in IMG/M
3300027812\|Ga0209656_10124106	Not Available	1325	Open in IMG/M
3300030967\|Ga0075399_10055446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	668	Open in IMG/M
3300030969\|Ga0075394_12036376	Not Available	839	Open in IMG/M
3300031057\|Ga0170834_113355722	Not Available	672	Open in IMG/M
3300031122\|Ga0170822_11929100	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300031128\|Ga0170823_13551375	Not Available	799	Open in IMG/M
3300031231\|Ga0170824_100509446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	577	Open in IMG/M
3300031231\|Ga0170824_105995787	Not Available	759	Open in IMG/M
3300031231\|Ga0170824_111150252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	934	Open in IMG/M
3300031231\|Ga0170824_121850506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300031446\|Ga0170820_11054661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	581	Open in IMG/M
3300031446\|Ga0170820_16620374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	834	Open in IMG/M
3300031469\|Ga0170819_14170865	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300031474\|Ga0170818_105618894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4118	Open in IMG/M
3300031474\|Ga0170818_113487927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300031474\|Ga0170818_114283653	All Organisms → cellular organisms → Bacteria → Proteobacteria	1960	Open in IMG/M
3300031543\|Ga0318516_10001771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	8568	Open in IMG/M
3300031543\|Ga0318516_10289246	Not Available	947	Open in IMG/M
3300031545\|Ga0318541_10280794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	927	Open in IMG/M
3300031545\|Ga0318541_10303612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	890	Open in IMG/M
3300031545\|Ga0318541_10386290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	782	Open in IMG/M
3300031546\|Ga0318538_10136790	All Organisms → cellular organisms → Bacteria → Proteobacteria	1288	Open in IMG/M
3300031546\|Ga0318538_10648509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	573	Open in IMG/M
3300031549\|Ga0318571_10011040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2137	Open in IMG/M
3300031561\|Ga0318528_10136529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1302	Open in IMG/M
3300031564\|Ga0318573_10386009	Not Available	752	Open in IMG/M
3300031564\|Ga0318573_10743911	Not Available	527	Open in IMG/M
3300031572\|Ga0318515_10149190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1246	Open in IMG/M
3300031573\|Ga0310915_10357140	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1036	Open in IMG/M
3300031640\|Ga0318555_10247197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	964	Open in IMG/M
3300031668\|Ga0318542_10068929	All Organisms → cellular organisms → Bacteria	1650	Open in IMG/M
3300031668\|Ga0318542_10093125	Not Available	1445	Open in IMG/M
3300031668\|Ga0318542_10589082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300031668\|Ga0318542_10658597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300031680\|Ga0318574_10749987	Not Available	572	Open in IMG/M
3300031681\|Ga0318572_10464718	Not Available	753	Open in IMG/M
3300031681\|Ga0318572_10531276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	701	Open in IMG/M
3300031681\|Ga0318572_10690670	Not Available	608	Open in IMG/M
3300031718\|Ga0307474_10868120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	714	Open in IMG/M
3300031719\|Ga0306917_10626582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	846	Open in IMG/M
3300031724\|Ga0318500_10157275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1072	Open in IMG/M
3300031724\|Ga0318500_10234284	Not Available	887	Open in IMG/M
3300031736\|Ga0318501_10196733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1053	Open in IMG/M
3300031744\|Ga0306918_11180470	Not Available	591	Open in IMG/M
3300031748\|Ga0318492_10654948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Siccirubricoccus → Siccirubricoccus deserti	562	Open in IMG/M
3300031751\|Ga0318494_10604368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300031753\|Ga0307477_10001526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	19287	Open in IMG/M
3300031753\|Ga0307477_10143710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1664	Open in IMG/M
3300031753\|Ga0307477_10439249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	891	Open in IMG/M
3300031768\|Ga0318509_10071545	Not Available	1820	Open in IMG/M
3300031770\|Ga0318521_10254704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1025	Open in IMG/M
3300031782\|Ga0318552_10315426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	795	Open in IMG/M
3300031792\|Ga0318529_10486635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	574	Open in IMG/M
3300031793\|Ga0318548_10227453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	916	Open in IMG/M
3300031794\|Ga0318503_10236302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	593	Open in IMG/M
3300031795\|Ga0318557_10054915	All Organisms → cellular organisms → Bacteria → Proteobacteria	1685	Open in IMG/M
3300031795\|Ga0318557_10177458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	969	Open in IMG/M
3300031795\|Ga0318557_10422877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300031797\|Ga0318550_10386876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677	Open in IMG/M
3300031799\|Ga0318565_10351332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	715	Open in IMG/M
3300031805\|Ga0318497_10350080	Not Available	825	Open in IMG/M
3300031819\|Ga0318568_10634317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300031846\|Ga0318512_10058473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1738	Open in IMG/M
3300031859\|Ga0318527_10192694	Not Available	862	Open in IMG/M
3300031879\|Ga0306919_10466526	Not Available	972	Open in IMG/M
3300031879\|Ga0306919_10600739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	849	Open in IMG/M
3300031879\|Ga0306919_11212633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	573	Open in IMG/M
3300031879\|Ga0306919_11372340	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300031890\|Ga0306925_10222759	All Organisms → cellular organisms → Bacteria	2034	Open in IMG/M
3300031890\|Ga0306925_11419894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300031896\|Ga0318551_10722653	Not Available	577	Open in IMG/M
3300031897\|Ga0318520_10744414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300031910\|Ga0306923_10041230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5044	Open in IMG/M
3300031910\|Ga0306923_10081759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3621	Open in IMG/M
3300031910\|Ga0306923_10366432	Not Available	1642	Open in IMG/M
3300031912\|Ga0306921_10459027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1484	Open in IMG/M
3300031912\|Ga0306921_10489443	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300031941\|Ga0310912_10040420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3231	Open in IMG/M
3300031942\|Ga0310916_11135974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300031945\|Ga0310913_10294732	Not Available	1144	Open in IMG/M
3300031946\|Ga0310910_10693041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	805	Open in IMG/M
3300031954\|Ga0306926_12099190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300031962\|Ga0307479_10001875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	19192	Open in IMG/M
3300031962\|Ga0307479_12020412	Not Available	525	Open in IMG/M
3300031981\|Ga0318531_10004102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5008	Open in IMG/M
3300031981\|Ga0318531_10024211	All Organisms → cellular organisms → Bacteria → Proteobacteria	2448	Open in IMG/M
3300032039\|Ga0318559_10173640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	985	Open in IMG/M
3300032039\|Ga0318559_10295975	Not Available	751	Open in IMG/M
3300032043\|Ga0318556_10421222	Not Available	698	Open in IMG/M
3300032044\|Ga0318558_10125759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1219	Open in IMG/M
3300032052\|Ga0318506_10118618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1143	Open in IMG/M
3300032054\|Ga0318570_10110168	Not Available	1209	Open in IMG/M
3300032054\|Ga0318570_10354001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	669	Open in IMG/M
3300032059\|Ga0318533_11254451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300032063\|Ga0318504_10214483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	901	Open in IMG/M
3300032065\|Ga0318513_10486899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	603	Open in IMG/M
3300032094\|Ga0318540_10116770	Not Available	1264	Open in IMG/M
3300032094\|Ga0318540_10584949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300033289\|Ga0310914_10002048	All Organisms → cellular organisms → Bacteria → Proteobacteria	13396	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.51%
Aquatic	Environmental → Aquatic	6.49%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.56%
Freshwater	Environmental → Aquatic → Freshwater	6.49%
Cave	Environmental → Terrestrial → Cave	1.95%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.49%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.65%
Loam	Environmental → Terrestrial → Soil → Loam	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	77.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.04%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.84%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.95%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.30%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	46.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	8.44%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.90%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	1.95%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	1.30%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.30%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300030967	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_100191873	3300003218	Bog Forest Soil	MTGSPDLNPRGGGFPSVGLRVVIVLAFHSIGRSVASLEAETSTERPLSVRAATICIVTLSVLGWTAMLLPLWAIAQ*
JGI26341J46601_100796742	3300003219	Bog Forest Soil	LDRFEGDVVLALPSFRHSATPLEAETNAQNPLSVRAAMMCIFTLSVLGWAAILLPLWAIIA*
Ga0062385_112940281	3300004080	Bog Forest Soil	VVIVLAYHSLGHSVAPLEAESSTERPLSVRAAMMCIVTLSVLGWTAILLPLWAFAQ*
Ga0062384_1000896702	3300004082	Bog Forest Soil	VLALSSFRHSATPLGAETNAQNPLSVRAAMMCIFTLSVISWAAILLPLWAIIE*
Ga0062386_1001492712	3300004152	Bog Forest Soil	VLAFHSLRHPVAPLEAENRTERPLSARAAMTCIVGLSVLGWAAILLPLWAIAQ*
Ga0066395_101635212	3300004633	Tropical Forest Soil	MIVLAFHSLRHSAASLEAASSTERPLSARAAMMSVVTLSVLGWTAVLLPLWAIAQ*
Ga0008090_135247671	3300005363	Tropical Rainforest Soil	VVIVLAFHSLGHSSASLELETQNGAERPLSAGAMMGILTLSLLGWAAILLPLWAIAP*
Ga0008090_145659421	3300005363	Tropical Rainforest Soil	MLTPAVARSPAIGLKVVIVLAFQSLRHSAGTLEAEASADRRLSPGAAMLSILTLSALGWTAMLLPLWAIAG*
Ga0126384_100166272	3300010046	Tropical Forest Soil	MIVLAFHSLRHSAASLEAASSTERPLSARAAMMSVVTLSMLGWTAVLLPLWAITQ*
Ga0126373_111905802	3300010048	Tropical Forest Soil	MEGFPSIGLRVVIVLAFHSLRHSAAPLEAESSTERRLSVRAAMMSIVTLSVLGWIAILLPLWAIAQ*
Ga0126373_116456651	3300010048	Tropical Forest Soil	LQVVIVTAFQSVRHSTAPPALESVTERRLSVRAAMMCILTLSVLGWTAVLLPLWAIAQ*
Ga0126373_118116352	3300010048	Tropical Forest Soil	MTGSPDLNRRAGRSSSIGLKVMIVLAFHSLGRSVAPLGAEGSTESHLSVRASMICIVTLSALGWTAILLPLWA
Ga0126372_110235051	3300010360	Tropical Forest Soil	IVTAFQSLRHSTAPLEAKSVTERRLSVRAAMLCVLTLSVLGWTAILLPLWAIAQ*
Ga0126372_131981281	3300010360	Tropical Forest Soil	MEGFPSIGLRVVIVLAFHSLRHSAASLEAASSTERPLSARAAMMSVVTLSMLGWTAVLLP
Ga0126378_105801582	3300010361	Tropical Forest Soil	VRGFCAIGLKVVIVLAFRGFGHSAASLAAQSGIERPLSAGAATMCIVTLSLLGWVAILLPLWVIAQ*
Ga0126378_123666471	3300010361	Tropical Forest Soil	LKVVIVLVFQSLRHSTGTLEAEASADRRLAPGAAMLSILTLSALGWSAVLLPLWAIAV*
Ga0126379_108868552	3300010366	Tropical Forest Soil	MLTPAVGRSPAIGLKVVIVLVFQSLRHSTGTLEAEASADRRLAPGAAMLSILTLSALGWSAVLLPLWAIAV*
Ga0126379_122986482	3300010366	Tropical Forest Soil	LVFHSFRHSAASFGVASSPERPLSARAAMISIATLSVLGWTAVLLPLWAIAQ*
Ga0126381_1008002624	3300010376	Tropical Forest Soil	MTVLAFHSFRHSAASLEAAIGGERPLSARAATMSIATLSMLGWAVVLLPLWVLAQ*
Ga0126381_1015262762	3300010376	Tropical Forest Soil	MGGFTSIGLRVMIVLAFRSLSHSAASLEAASSIERPLSARAAMMSIVTLSVLGWTVVLLPLWAIAQ*
Ga0126381_1038412351	3300010376	Tropical Forest Soil	FHSLRHSVASLGAASNSERPLSARAAMMSIATLSVLGWAVVLLPLWMIAQ*
Ga0182036_103299842	3300016270	Soil	GGFLSIGFKVVIVLAFHSLGHSVAPREAESSLERPLSVRAAMICIVTLSALCWTPILLPLWAIAQ
Ga0182036_105430391	3300016270	Soil	MVVIVLAFHSLGHSVAPLEAESSTERPLSVRAAMICIVTLSALGWTAILLPLWAIAQ
Ga0182041_100405266	3300016294	Soil	MGGFPSIGLRVVIVLAFHSLRHSAAPLEAESSTERRLSVRAAMMSIVTLSVLGWIAILLPLWAIAKSHV
Ga0182041_100905531	3300016294	Soil	MTGSPDLNPRVGGSSSIGLKVVIVLAFHSLGRSVAPLEAEGSTERPLSVRASMICIVMLSALGWTAIFLPLWAIAQ
Ga0182041_109849842	3300016294	Soil	VIVLAFHSLGHSVAPREAESSLERPLSVRAAMICIVTLSALGWTAILLPLWAIAQ
Ga0182041_111297141	3300016294	Soil	RVVIVLAFHSLRHSAAPLEAESSTDRPLSARAAMMCIVSLSVIGWTAILLPLWAIAQ
Ga0182041_114551682	3300016294	Soil	LKVVIVLAFQSLRHSAEVLEAEASAERRLSPRAAMMCIATLSVLGWTAILLPLWAIAQ
Ga0182035_102935562	3300016341	Soil	SLGHSVAPREAESSLERPLSVRAAMICIVTLSALGWTAILLPLWAIAQ
Ga0182035_103740281	3300016341	Soil	VLAFHSLGHSVAPREAESSLERPLSVRAAMICIVTLSALGWTAIL
Ga0182032_100174125	3300016357	Soil	IGLKVVIVTAFQSLRHSTAPLEAKSVTERRLSVRAAMLCVLTLSVLGWTAILLPLWAIAQ
Ga0182032_116997822	3300016357	Soil	AFQSLRHSAEVLEAEASAERRLSPRAAMMCIATLSVLGWTAILLPLWAIAQ
Ga0182040_103100092	3300016387	Soil	MLTPAVGRSPAIGLKVVIVLAFQSLRHSTGTLEAEASADRRLSPGAAMLSILTLSALGWTAMLLPLWAIAG
Ga0182040_109340832	3300016387	Soil	MTGSPDLKPRVGGSASIALKVVIVLAFHSLGHSVAPLEAESSTERPLSVRAAMICIVTLSALGWTAILLPLWAIAQ
Ga0182039_102966342	3300016422	Soil	LAFHSLGHSVAPREAESSLERPLSVRAAMICIVTLSALCWTAILLPLWAIAQ
Ga0182038_100390842	3300016445	Soil	MEGFPSIGLRVVIVLAFHSLRHSAASPEAASSTERPLSARAAMMSVVTLSVLGWTAVLLPLWAIAQ
Ga0187818_105680901	3300017823	Freshwater Sediment	VFALPSIRCSATPLEAETSGQNPLSVRAAVMCIFTLSVVGWAAILLPLWAIAE
Ga0187765_102340593	3300018060	Tropical Peatland	VGGLPSIDWKVVIVLAFQSFRHSAGALEAEAGIERRLSPRAAMMSILTLSVLGWTAILLPLWTIVQ
Ga0210407_101493052	3300020579	Soil	VLAFHNLRHSVASLGAASRGERPLSPRAAMMSIALLSVFGWAAILLPLWAIAQ
Ga0210407_107957852	3300020579	Soil	VLAFHSLRHSVASLGAASTSQRPLSARAAMMSITTLSVLGWAVILLPLWVIAQ
Ga0210403_103072572	3300020580	Soil	MIVLAFHSLRHSEASLEAASGDERPLSARAAMMSIATLSVLGWAVVLLPLWMIAQ
Ga0210399_107517582	3300020581	Soil	MIVLAFHNLRHSVASLGAASRGERPLSPRAAMMSIALLSVFGWAAILLPLWAIAQ
Ga0210399_110746532	3300020581	Soil	VGGFLSIGLKVVIVLAFHSLGHSVAPLEAESSTERPLSVGAAMMCIVTLSALGWTAILLPLWAIAQ
Ga0213877_102496992	3300021372	Bulk Soil	VVIVLAFQGHRHSAAPLEAESITERPLSARAAMVCIVALSVLGWTALLLPLWMIAQ
Ga0213879_100658701	3300021439	Bulk Soil	VVIVLAFQGHRHSAAPLEAESITERPLSARAAMVCIVALSVLGWTALLLPLWVIAQ
Ga0187846_100090683	3300021476	Biofilm	MLTPAVGRSPAIGLKVVIVLAFQSLRHSGGTLEAEVSGDRRLSPGAAMLSILTLSALGWTAMLLPLWAIAG
Ga0187846_100435521	3300021476	Biofilm	VLAFHSLRHSATPLEAETSAQNPLSVRAAMLSIVTLSVLGWTAILLPLWAVVQ
Ga0187846_101749252	3300021476	Biofilm	VGGFPSIGLKVVIVLAFQSLRHSAETLEAEASAERRLSPRAAMMCIATLSVLGWTAILLPLWAIAQ
Ga0210402_109570543	3300021478	Soil	MIVLAFHNLRHSVASLGAASRGERPLSPRAAMMSIALLSVFGWAAILLPLW
Ga0126371_100745715	3300021560	Tropical Forest Soil	MIVLAFHSLRHSAASLEAASSTERPLSARAAMMSVVTLSVLGWTAVLLPLWAIAQ
Ga0126371_103517712	3300021560	Tropical Forest Soil	MIVLVFHSLRHSVASLGVASNSERPLSARAAMMSIASLSVLGWAVVLLPLWMIAQ
Ga0209446_10008733	3300027698	Bog Forest Soil	MTGSPDLNPRGGGFPSVGLRVVIVLAFHSIGRSVASLEAETSTERPLSVRAATICIVTLSVLGWTAMLLPLWAIAQ
Ga0209248_100457842	3300027729	Bog Forest Soil	VVIVLAYHSLGHSVAPLEAESSTERPLSVRAAMMCIVTLSVLGWTAILLPLWAFAQ
Ga0209448_100285494	3300027783	Bog Forest Soil	MTGSPDLKPRAGGFPSIGLKVVIVLAFHSLGHSVAPPEAESSLERPLSVRAAMICIVTLSALGWTAILLPLWAIAQ
Ga0209656_101241062	3300027812	Bog Forest Soil	VVIVLAFHSLRHPVAPLEAENRTERPLSARAAMTCIVGLSVLGWAAILLPLWAIAQ
Ga0075399_100554463	3300030967	Soil	IGWRVMIVLAFHSLRHSEASLEAASGDERPLSARAAMMSIATLSVLGWAVVLLPLWMIAQ
Ga0075394_120363763	3300030969	Soil	MGGSPSIGWRVMIVLAFHSLRHSEASLEAASGDERPLSARAAMMSIATLSVLGWAVVLLPLWMIAQ
Ga0170834_1133557222	3300031057	Forest Soil	MIVLAFHSLRHSVASLGAASDSERPLSARAAMMSIATLSVLGWAVVLLPLWVIAQ
Ga0170822_119291002	3300031122	Forest Soil	MIVLAFHSLRHSVASLGAASDSERPLSARAAMMSIATLSVLGWAVILLPFWVIAQ
Ga0170823_135513751	3300031128	Forest Soil	VMIVLAFHSPRHSEASLEAASGDERPLSARAAMMSIATLSVLGWAVVLLPLWMIAQ
Ga0170824_1005094462	3300031231	Forest Soil	RHSVASLGAASDSERPLSARAAMMSIATLSVLGWAVVLLPLWVIAQ
Ga0170824_1059957872	3300031231	Forest Soil	MIMLAFHSVRHSVASLGAASDSERPLSARAAMMSIATSSVLGWTAVLLPFWVLSQ
Ga0170824_1111502522	3300031231	Forest Soil	PSIGWRVMIVLAFHNLRHSVVSLEAATRGERPLSPRAAMMSIASLSVVSWAAILLPLWAIAQ
Ga0170824_1218505062	3300031231	Forest Soil	GWRVMIVLAFHSLRHSVASLGAASDSERPLSARAAMMSIATLSVLGWAVVLLPFWVIAQ
Ga0170820_110546611	3300031446	Forest Soil	AFHSLRHSVASLGAASDSERPLSARAAMMSIATLSVLGWAVVLLPLWVIAQ
Ga0170820_166203742	3300031446	Forest Soil	SVALLEAATRGERPLSPRAAMMSIASLSVFGWAAILLPLWAIAQ
Ga0170819_141708652	3300031469	Forest Soil	MLAFHSVRHSVASLGAASGDERPLSARAAMMSIATLSVLGWAVVLLPLWMIAQ
Ga0170818_1056188945	3300031474	Forest Soil	MIVLAFHNLRHSVALLEAATRGERPLSPRAAMMSIASLSVFGWAAILLPLWAIAQ
Ga0170818_1134879272	3300031474	Forest Soil	GWRVMIVLAFHSLRHSVASLGAASDSERPLSARAAMMSIATLSVLGWAVVLLPLWVIAQ
Ga0170818_1142836532	3300031474	Forest Soil	MLAFHSVRHSVASLGAASDSERPLSARAAMMSIATSSVLGWTAVLLPFWVLSQ
Ga0318516_100017717	3300031543	Soil	MTGSPDLNPRAGRSSSIGLKVVIVLAFHSLGRSVAPLGAEGSTESPLSVRASMICIVTLSVLGWTAILLPLWAIAQ
Ga0318516_102892462	3300031543	Soil	MTGSPDLNPRMGGFPSIGLKVVIVLAFHSLGHSVAPLEAESSTERPLSVRAAMICIVTLSALGWTAILLPLWAIAQ
Ga0318541_102807942	3300031545	Soil	LKVVIVLASQSLRHSAGTLEAEASADRRLSPGAAMLSILTLSALGWTAILLPLWAIAR
Ga0318541_103036122	3300031545	Soil	MEGFPSIGLRVVIVLAFHSLRHSAAPLEAESSTERRLSVRAAMMSIVTLSVLGWIAILLPLWAIAQ
Ga0318541_103862902	3300031545	Soil	VGGFPSIVLKVVIVLAFQSLRHSAETLEAGASAERRLSPRAAMMCIATLSVLGWTAILLPLWAIAQ
Ga0318538_101367903	3300031546	Soil	VGGFCSTGLKVVIVLAFHRLGHAAASPEAQSGAERPLSAGAAMMGILTLSLLGWAAILLPLWAIAL
Ga0318538_106485092	3300031546	Soil	LLDHYGPEGVHRILTPGVGGFPSIVLKVVIVLAFQSLRHSAETLEAGASAERRLSPRAAMMCIATLSVLGWTAILLPLWAIAQ
Ga0318571_100110402	3300031549	Soil	MTGSPDLNPRAGRSSSIGLKVVIVLAFHSLGRSVAPLGAEGSTESPLSVRASMICIVTLSVLGWTAILLPLWVIAQ
Ga0318528_101365292	3300031561	Soil	VGGFLSIGFKVVIVLAFHSLGHSVAPREAESSLERPLSVRAAMICIVTLSALGWTAILLPLWAIAQ
Ga0318573_103860092	3300031564	Soil	MGGFLSIGLKVVIVLAFHSLGHSVAPREAESSLERPLSVRAAMICIVTLSALGWTAILLPLWAIAQ
Ga0318573_107439111	3300031564	Soil	MLTPAVGRSPAIGLKVVIVLAFQSLRHSAGTLEAEASADRRLPPGAAMLSILTLSALGWTAMLLPLWAIAG
Ga0318515_101491901	3300031572	Soil	LSIGLKVVIVLAFHSLGHSVAPREAESSLERPLSVRAAMICIVTLSALCWTAILLPLWAIAQ
Ga0310915_103571402	3300031573	Soil	LKVVIVLAFQSLRHSAEVLEAEAGAERRLSPRAAMMCIATLSVLGWTAILLPLWAIAQ
Ga0318555_102471971	3300031640	Soil	LKVVIVLAFQSLRHSAEVLEAEASAERRLSQRAAMMCIATLSVLGWTAILLPLWAITQ
Ga0318542_100689292	3300031668	Soil	MTGSPDLNPRAGRSSSIGLKVVIVLAFHSLGRSFAPLGAEGSTESPLSVRASMICIVTLSVLGWTAILLPLWAIAQ
Ga0318542_100931253	3300031668	Soil	LKVVIVLAFQSLRHSAETLEAGASAERRLSPRAAMMCIATLSVLGWTAILLPLWAIAQ
Ga0318542_105890822	3300031668	Soil	DLNPRMGGFPSIGLKVVIVLAFHSLGHSVAPLEAESSTERPLSVRAAMICIVTLSALGWTAILLPLWAIAQ
Ga0318542_106585972	3300031668	Soil	LSIGLKVVIVLAFHSLGHSVAPREAESSLERPLSVRAAMICIVTLSALGWTAILLPLWAIAQ
Ga0318574_107499872	3300031680	Soil	LLDRCGPDRVHRMLTPAVGRSPAIGLKVVIVLAFQSLRHSAGTLEAEASADRRLPPGAAMLSILTLSALGWTAMLLPLWAIAG
Ga0318572_104647182	3300031681	Soil	MLTPAVGRSPAIGLKVVIVLAFQSLRHSAGTLEAEASADRRLSPGAAMLSILTLSALGWTAMLLPLWAIAG
Ga0318572_105312762	3300031681	Soil	VGGFPSIVLKVVIVLAFQSLRHSAEVLEAEASAERRLSPRAAMMCIATLSVLGWTAILLPLWAIAQ
Ga0318572_106906701	3300031681	Soil	MGGFLSIGLKVVIVLAFHSLGHSVAPREAESSLERPLSVRAAMICIVTLSALCWTPILLPLWAIAQ
Ga0307474_108681202	3300031718	Hardwood Forest Soil	VLAFHSLGHSVTPLEAESSTERPLSVGAAMMCIVTLSALGWTAILLPLWAIAQ
Ga0306917_106265821	3300031719	Soil	PDVNPCAGGFCSIGLTVVIVLAFHGFGHSTASLEPQSSAARPLSAGAAMVWIVTLSLLGWAAILLPLWAVAQ
Ga0318500_101572751	3300031724	Soil	LNPRVGGSSSIGLKVVIVLAFHSLGRSVAPLDAEGSTERPLSVRASMICIVMLSALGWTAIFLPLWAIAQ
Ga0318500_102342843	3300031724	Soil	MGGFLSIGLKVVIVLAFHSLGHSVAPREAESSLERPLSVRAAMICIVTLSALCWTAILLPLWAIAQ
Ga0318501_101967333	3300031736	Soil	MEGFPSIGLRVVIVLAFHSLRHSAAPLEAESSTERRLSVRAAMMSIVTLSVLGWIAILLP
Ga0306918_111804701	3300031744	Soil	GSPPIGLKVVIVTAFQSLRHSTAPLEAKSVTERRLSVRAAMLCVLTLSVLGWTAILLPLWAIAQ
Ga0318492_106549482	3300031748	Soil	VGGFPSIVLKVVIVLAFQSLRHSAEVLEAEASAERRLSQRAAMMCIATLSVLGWTAILLPLWAITQ
Ga0318494_106043682	3300031751	Soil	VGGFLSIGFKVVIVLAFHSLGHSVVPREAESSLERPLSVRAAMICIVTLSALGWTAILLPLWAIAQ
Ga0307477_1000152613	3300031753	Hardwood Forest Soil	LKVVIVLAFHSLGHSVPPLEAQSGTERPLPVRAAMMCIVTLSLLGWTAILLPLWAITQ
Ga0307477_101437102	3300031753	Hardwood Forest Soil	VGGFLSIGLKVVIVLAFHSLGHSVTPLEAESSTERPLSVGAAMMCIVTLSALGWTAILLPLWAIAQ
Ga0307477_104392491	3300031753	Hardwood Forest Soil	FHTPGHSVAPLEAESSTERPLSVGAAMMCIVTLSVLGWTAILLPLWAIAQ
Ga0318509_100715452	3300031768	Soil	AVMTGSQDLNPRAGRSSSIGLKVVIVLAFHSLGRSVAPLGAEGSTESPLSVRASMICIVTLSVLGWTAILLPLWAIAQ
Ga0318521_102547041	3300031770	Soil	HQILTPGVGGFLSIGFKVVIVLAFHSLGHSVAPREAESSLERPLSVRAAMICIVTLSALGWTAILLPLWAIAQ
Ga0318552_103154261	3300031782	Soil	GGFLSIGLKVVIVLAFHSLGHSVAPREAESSLERPLSVRAAMICIVTLSALCWTAILLPLWAIAQ
Ga0318529_104866352	3300031792	Soil	VGGFPSIVLKVVIVLAFQSLRHSAEVLEAEAGAERRLSPRAAMMCIATLSVLGWTAILLPLWAIAQ
Ga0318548_102274531	3300031793	Soil	SSSIGLKVVIVLAFHSLGHSVAPLEAESSTERPLSVRAAMICIVTLSALGWTAILLPLWAIAQ
Ga0318503_102363022	3300031794	Soil	GFPSIGLRVVIVLAFHSLRHSAAPLEAESSTERRLSVRAAMMSIVTLSVLGWIAILLPLWAIAQ
Ga0318557_100549154	3300031795	Soil	MGGFLSIGLKVVIVLAFHSLGHSVAPREAESSLERPLSVRAAMICIVTLSALCWTAILLP
Ga0318557_101774583	3300031795	Soil	MTGSPDLNPRMGGFPSIGLKVVIVLAFHSLGHSVAPLEAESSTERPLSVRAAMICIVTLSALGWTAILLPLWAIA
Ga0318557_104228772	3300031795	Soil	MLTPAVGRSPAIGLKVVIVLASQSLRHSAGTLEAEASADRRLSPGAAMLSILTLSALGWTAILLPLWAIAR
Ga0318550_103868761	3300031797	Soil	IVLAFHSLGRSVAPLGAEGSTESPLSVRASMICIVTLSVLGWTAILLPLWAIAQ
Ga0318565_103513322	3300031799	Soil	LKVVIVLAFHSLGRSVAPLGAEGSTESPLSVRASMICIVTLSVLGWTAILLPLWAIAQ
Ga0318497_103500802	3300031805	Soil	VGGFLSIGFKVVIVLAFHSLGHSVAPREAESSLERPLSVRAAMICIVTLSALCWTAILLPLWAIAQ
Ga0318568_106343172	3300031819	Soil	LKVVIVLAFHSLGHSVAPLEAESSTERPLSVRAAMICIVTLSALGWTAILLPLWAIAQ
Ga0318512_100584732	3300031846	Soil	MTGSPDLNPGAGRSSSIGLRVVIVLAFHSLGRSVAPLGAEGSTESPLSVRASMICIVTLSVLGWTAILLPLWAIAQ
Ga0318527_101926943	3300031859	Soil	MTGSPDLNPRMGGFPSIGLKVVIVLAFHSLGRSVAPLGAEGSTESPLSVRASMICIVTLSVLGWTAILLPLWVIAQ
Ga0318527_103797801	3300031859	Soil	RSVAPLGAEGSTESPLSVRASMICIVTLSVLGWTAILLPLWAIAQ
Ga0306919_104665262	3300031879	Soil	VVIVFAYHSLGHSVAPLKAESSTEQPLSVRAAMMCIAASSVLGWTAILLPLWAFAQ
Ga0306919_106007392	3300031879	Soil	VVIVLAFHSLGHSAASLEAQSVAERPLSAGPAMMCVVTLSLVGWAAILLPLWAIAQ
Ga0306919_112126332	3300031879	Soil	GFCSIGLTVVIVLAFHGFGHSTASLEPQSSAARPLSAGAAMVWIVTLSLLGWAAILLPLWAVAQ
Ga0306919_113723401	3300031879	Soil	MLTPAVGRSPAIGLKVVIVLAFQSLRRSAGTLEAEVSADRRLAPGAAMLSILTLSALGWTAILLPLWAIAR
Ga0306925_102227591	3300031890	Soil	VHRMLTPAVGRSPAIGLKVVIVLAFQSLRHSAGTLEAEASADRRLSPGAAMLSILTLSALGWTAMLLPLWAIAG
Ga0306925_114198941	3300031890	Soil	LVSPDVNPCVGGFCSTGLKVVIVLAFHRLGHAAASPEAQSGAERPLSAGAAMMGILTLSLLGWAAILLPLWAIAL
Ga0318551_107226531	3300031896	Soil	MTGSPDLNPRAGRSSSIGLKVVIVLAFHSLGRSVAPLGAEGSTESPLSVRASMICIVTLSVLGWTAILLPLWAIA
Ga0318520_107444142	3300031897	Soil	RHSAEVLEAEASAERRLSPRAAMMCIATLSVLGWTAILLPLWAIAQ
Ga0306923_100412302	3300031910	Soil	VGGFCSTGLKVVIVLAFHRLGHAAVSPEAQSGAERPLSAGAAMMGILTLSLLGWAAILLPLWAIAL
Ga0306923_100817597	3300031910	Soil	MLTPAVGRSPAIGLKVVIVLAFQSLRHSAGTLEAEASADRRLPPGAAMLSILTLSALGWTAMLLPLWA
Ga0306923_103664321	3300031910	Soil	SLGHSVAPLKAESSTEQPLSVRAAMMCIAASSVLGWTAILLPLWAFAQ
Ga0306921_104590273	3300031912	Soil	MIVLVFHSLRHSVASLGAASNSERPLSARAAMTSIATLSVLGWAVVLLPLWMIAQ
Ga0306921_104894433	3300031912	Soil	MRVMIVLAFHSLRHSVASPEAASSTERPLSARAAMMSVVTLSVLGWTAVLLPLWAIAQ
Ga0310912_100404203	3300031941	Soil	MTGSQDLNPRAGRSSSIGLKVVIVLAFHSLGRSVAPLGAEGSTESPLSVRASMICIVTLSVLGWTAILLPLWAIAQ
Ga0310916_111359742	3300031942	Soil	RWSPYHFHSLRHSAASLEAASSTERPLSARAAMMSVVTLSVLGWTAVLLPLWAIAQ
Ga0310913_102947323	3300031945	Soil	MLTPAVGRSPAIGLKVVIVLAFQSLRHSTGTLEAEASADRRLPPGAAMLSILTLSALGWTAMLLPLWAIAG
Ga0310910_106930412	3300031946	Soil	GSPDVNPCAGGFCSIGLTVVIVLAFHGFGHSTASLEPQSSAARPLSAGAAMVWIVTLSLLGWAAILLPLWAVAQ
Ga0306926_120991901	3300031954	Soil	VHRMLTPAVGRSPAIGLKVVIVLAFQSLRHSAGTLEAEASADRRLPPGAAMLSILTLSALGWTAMLLPLWAIAG
Ga0307479_100018753	3300031962	Hardwood Forest Soil	LKVVIVLAFHSLGHSVPPLEAQSGTERPLSVRAAMMCIVTLSLLGWTAILWPLWAITQ
Ga0307479_120204122	3300031962	Hardwood Forest Soil	LKVVIVTAFQSLRHSTAPPEAKSITERRLSVRAAMMCVLTLSVLGWTAILLPLWAIAQ
Ga0318531_100041022	3300031981	Soil	MTGSPDLNPRVGRPSSIGLKVVIVLAFHSLGRSVAPLGAEGSTESPLSVRASMICIVTLSVLGWTAILLPLWAIAQ
Ga0318531_100242115	3300031981	Soil	MGGFPSIGLRVVIVLAFHSLRHSAAPLEAESSTERRLSVRAAMMSIVTLSVLGWIAILLPLWAIAQ
Ga0318559_101736402	3300032039	Soil	FLSIGFKVVIVLAFHSLGHSVAPREAESSLERPLSVRAAMICIVTLSALGWTAILLPLWAIAQ
Ga0318559_102959751	3300032039	Soil	LKVVIVTAFQSLRHLTAPLEAKSVTERRLSVRAAMLCVLTLSVLGWTAILLPLWAIAQ
Ga0318556_104212223	3300032043	Soil	MLTPAVGRSPAIGLKVVIVLAFQSLRHSAGTLEAEASADRRLPPGAAMLSILTLSALGWT
Ga0318558_101257591	3300032044	Soil	VVIVLAFHSLGHSVAPREAESSLERPLSVRAAMICIVTLSALCWTAILLPLWAIAQ
Ga0318506_101186182	3300032052	Soil	SSSIGLKVVIVLAFHSLGHSVAPREAESSLERPLSVRAAMICIVTLSALGWTAILLPLWAIAQ
Ga0318570_101101684	3300032054	Soil	MTGSPDLNPRAGRSSSIGLKVVIVLAFHSLGRSVAPLGAEGSTESPLSVRASMICIVTLSVLGWTAILLPLWVI
Ga0318570_103540012	3300032054	Soil	EGFPSIGLRVVIVLAFHSLRHSAAPLEAESSTERRLSVRAAMMSIVTLSVLGWIAILLPLWAIAQ
Ga0318533_112544511	3300032059	Soil	MGGFRSIGLRVMIVLAFHSLRHSAASPEAASSTERPLSARAAMMSVVTLSVLGWTAVLLPLWAIAQ
Ga0318504_102144832	3300032063	Soil	LRHSAAPLEAESSTERRLSVRAAMMSIVTLSVLGWIAILLPLWAIAQ
Ga0318513_104868991	3300032065	Soil	AVMTGSPDLNPRVGGSSSIGLKVVIVLAFHSLGRSVAPLGAEGSTESPLSVRASMICIVTLSVLGWTAILLPLWAIAQ
Ga0318540_101167703	3300032094	Soil	VGGFLSIGLKVVIVLAFHSLGHSVAPREAESSLERPLSVRAAMICIVTLSALCWTAILLPLWAIAQ
Ga0318540_105849491	3300032094	Soil	LRHSAEVLEAEAGAERRLSPRAAMMCIATLSVLGWTAILLPLWAIAQ
Ga0310914_100020485	3300033289	Soil	VLAFHSLGHSVAPLEAESSTERPLSVRAAMICIVTLSALGWTAILLPLWAIAQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044248

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences