Metagenome / Metatranscriptome Family F044134

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F044134
Family Type	Metagenome / Metatranscriptome
Number of Sequences	155
Average Sequence Length	52 residues
Representative Sequence	VTQITYDAPLSSYVPDNEMHPFGRRREVMTWSSDSTSVLLYAILATLFVMSWIYVPA
Number of Associated Samples	96
Number of Associated Scaffolds	155

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	33.11 %
% of genes near scaffold ends (potentially truncated)	52.90 %
% of genes from short scaffolds (< 2000 bps)	87.74 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.484 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.129 % of family members)
Environment Ontology (ENVO)	Unclassified (49.677 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.548 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.82% β-sheet: 0.00% Coil/Unstructured: 61.18%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 155 Family Scaffolds
PF03401	TctC	3.23
PF13181	TPR_8	3.23
PF14234	DUF4336	2.58
PF01717	Meth_synt_2	2.58
PF00042	Globin	1.29
PF13460	NAD_binding_10	1.29
PF07719	TPR_2	1.29
PF12833	HTH_18	1.29
PF04392	ABC_sub_bind	0.65
PF13432	TPR_16	0.65
PF01569	PAP2	0.65
PF02803	Thiolase_C	0.65
PF02563	Poly_export	0.65
PF13683	rve_3	0.65
PF02518	HATPase_c	0.65
PF00291	PALP	0.65
PF14525	AraC_binding_2	0.65
PF00126	HTH_1	0.65
PF03466	LysR_substrate	0.65

COG ID	Name	Functional Category	% Frequency in 155 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.23
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	2.58
COG1017	Hemoglobin-like flavoprotein	Energy production and conversion [C]	1.29
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.65
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	0.65
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.65

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.48 %
Unclassified	root	N/A	44.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.48 %
Unclassified	root	N/A	44.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.48 %
Unclassified	root	N/A	44.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.03 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	12.26 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.58 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.94 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12.26 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.65 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.65 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.52 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	12.26 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.74 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.65 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.65 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.65 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.52 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	12.26 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.94 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.65 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.65 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.65 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.65 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.65 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.52 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	12.26 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.94 %
Scytonemataceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae	0.65 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.65 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.65 %
Solimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Solimonas	0.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.65 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.52 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	12.26 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.65 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.65 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.65 %
Microvirga lupini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	0.65 %
Scytonema	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae → Scytonema	0.65 %
Solimonas soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Solimonas → Solimonas soli	0.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.65 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.52 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	12.26 %
Bradyrhizobium sp. NAS80.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	0.65 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.65 %
unclassified Scytonema	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae → Scytonema → unclassified Scytonema	0.65 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.65 %
Microvirga lupini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	0.65 %
Solimonas soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Solimonas → Solimonas soli	0.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.65 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.52 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	12.26 %
Scytonema sp. NIES-4073	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae → Scytonema → unclassified Scytonema → Scytonema sp. NIES-4073	0.65 %
Bradyrhizobium sp. NAS80.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	0.65 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.65 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.65 %
Microvirga lupini	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	0.65 %
Solimonas soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Solimonas → Solimonas soli	0.65 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.65 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.65 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_11727_length_2359_cov_7.301399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2391	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100430754	Not Available	718	Open in IMG/M
3300004633\|Ga0066395_10011300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3317	Open in IMG/M
3300004633\|Ga0066395_10203880	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1037	Open in IMG/M
3300005163\|Ga0066823_10083153	All Organisms → cellular organisms → Bacteria → Proteobacteria	632	Open in IMG/M
3300005165\|Ga0066869_10013381	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300005332\|Ga0066388_102749383	All Organisms → cellular organisms → Bacteria → Proteobacteria	898	Open in IMG/M
3300005332\|Ga0066388_104917325	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300005363\|Ga0008090_10009610	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	566	Open in IMG/M
3300005436\|Ga0070713_100134342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2185	Open in IMG/M
3300005436\|Ga0070713_101354373	All Organisms → cellular organisms → Bacteria → Proteobacteria	690	Open in IMG/M
3300005467\|Ga0070706_100254817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1638	Open in IMG/M
3300005468\|Ga0070707_100361761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1409	Open in IMG/M
3300005713\|Ga0066905_100306729	Not Available	1249	Open in IMG/M
3300005713\|Ga0066905_100582210	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	944	Open in IMG/M
3300005713\|Ga0066905_100694608	Not Available	872	Open in IMG/M
3300005713\|Ga0066905_101260556	Not Available	663	Open in IMG/M
3300005713\|Ga0066905_102025022	Not Available	535	Open in IMG/M
3300005764\|Ga0066903_100157439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3283	Open in IMG/M
3300005764\|Ga0066903_101311059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1353	Open in IMG/M
3300005764\|Ga0066903_102021623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1107	Open in IMG/M
3300005764\|Ga0066903_104100554	Not Available	780	Open in IMG/M
3300005764\|Ga0066903_104743988	Not Available	723	Open in IMG/M
3300005764\|Ga0066903_104856525	Not Available	714	Open in IMG/M
3300005764\|Ga0066903_105627986	Not Available	659	Open in IMG/M
3300005764\|Ga0066903_108745766	Not Available	514	Open in IMG/M
3300006172\|Ga0075018_10130207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1144	Open in IMG/M
3300006852\|Ga0075433_10439068	All Organisms → cellular organisms → Bacteria → Proteobacteria	1151	Open in IMG/M
3300006871\|Ga0075434_100461978	All Organisms → cellular organisms → Bacteria → Proteobacteria	1291	Open in IMG/M
3300006904\|Ga0075424_102098674	Not Available	596	Open in IMG/M
3300009090\|Ga0099827_10408354	Not Available	1161	Open in IMG/M
3300009792\|Ga0126374_10861666	Not Available	698	Open in IMG/M
3300009792\|Ga0126374_11408720	Not Available	568	Open in IMG/M
3300010043\|Ga0126380_10100926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1731	Open in IMG/M
3300010043\|Ga0126380_10390695	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1029	Open in IMG/M
3300010043\|Ga0126380_11875481	Not Available	544	Open in IMG/M
3300010046\|Ga0126384_10957170	Not Available	777	Open in IMG/M
3300010047\|Ga0126382_10012728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga lupini	4108	Open in IMG/M
3300010047\|Ga0126382_10154183	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300010048\|Ga0126373_11061023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	876	Open in IMG/M
3300010048\|Ga0126373_12587017	Not Available	566	Open in IMG/M
3300010358\|Ga0126370_10618384	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	938	Open in IMG/M
3300010358\|Ga0126370_10699921	Not Available	890	Open in IMG/M
3300010358\|Ga0126370_12322798	Not Available	531	Open in IMG/M
3300010359\|Ga0126376_10435620	Not Available	1193	Open in IMG/M
3300010359\|Ga0126376_11645354	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300010360\|Ga0126372_12181279	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	603	Open in IMG/M
3300010360\|Ga0126372_12325027	Not Available	586	Open in IMG/M
3300010362\|Ga0126377_10490361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1258	Open in IMG/M
3300010366\|Ga0126379_10142824	All Organisms → cellular organisms → Bacteria → Proteobacteria	2216	Open in IMG/M
3300010863\|Ga0124850_1019181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2185	Open in IMG/M
3300010863\|Ga0124850_1105172	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	776	Open in IMG/M
3300012096\|Ga0137389_10139791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1972	Open in IMG/M
3300012200\|Ga0137382_10036643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2979	Open in IMG/M
3300012200\|Ga0137382_11260085	Not Available	523	Open in IMG/M
3300012582\|Ga0137358_10034000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	3358	Open in IMG/M
3300012957\|Ga0164303_10399385	Not Available	848	Open in IMG/M
3300012961\|Ga0164302_10123105	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300012971\|Ga0126369_10365197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1470	Open in IMG/M
3300012971\|Ga0126369_11231129	All Organisms → cellular organisms → Bacteria → Proteobacteria	838	Open in IMG/M
3300012971\|Ga0126369_13188553	Not Available	537	Open in IMG/M
3300012971\|Ga0126369_13403802	Not Available	521	Open in IMG/M
3300012986\|Ga0164304_11878838	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300012987\|Ga0164307_11621847	Not Available	548	Open in IMG/M
3300015371\|Ga0132258_10384171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3483	Open in IMG/M
3300016270\|Ga0182036_11039591	Not Available	676	Open in IMG/M
3300016294\|Ga0182041_10442386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1115	Open in IMG/M
3300016341\|Ga0182035_10205095	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300016341\|Ga0182035_10781390	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300016357\|Ga0182032_10116699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1917	Open in IMG/M
3300016371\|Ga0182034_10942161	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	744	Open in IMG/M
3300016371\|Ga0182034_11783782	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	542	Open in IMG/M
3300016387\|Ga0182040_10936360	Not Available	720	Open in IMG/M
3300016387\|Ga0182040_11109189	All Organisms → cellular organisms → Bacteria → Terrabacteria group	663	Open in IMG/M
3300016404\|Ga0182037_10523773	Not Available	997	Open in IMG/M
3300016445\|Ga0182038_10137254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1845	Open in IMG/M
3300016445\|Ga0182038_10293061	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300020581\|Ga0210399_10124138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2123	Open in IMG/M
3300021479\|Ga0210410_11149507	Not Available	667	Open in IMG/M
3300021560\|Ga0126371_10855663	All Organisms → cellular organisms → Bacteria → Proteobacteria	1054	Open in IMG/M
3300021560\|Ga0126371_11432696	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	821	Open in IMG/M
3300025922\|Ga0207646_11194795	Not Available	667	Open in IMG/M
3300027874\|Ga0209465_10225852	Not Available	935	Open in IMG/M
3300027874\|Ga0209465_10283591	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	829	Open in IMG/M
3300027874\|Ga0209465_10605828	Not Available	542	Open in IMG/M
3300027882\|Ga0209590_10353550	Not Available	947	Open in IMG/M
3300031543\|Ga0318516_10221578	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1093	Open in IMG/M
3300031543\|Ga0318516_10516694	Not Available	685	Open in IMG/M
3300031543\|Ga0318516_10563167	Not Available	652	Open in IMG/M
3300031544\|Ga0318534_10615059	Not Available	617	Open in IMG/M
3300031545\|Ga0318541_10130720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1368	Open in IMG/M
3300031545\|Ga0318541_10260264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	964	Open in IMG/M
3300031561\|Ga0318528_10138017	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300031561\|Ga0318528_10561321	Not Available	613	Open in IMG/M
3300031573\|Ga0310915_10121774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1781	Open in IMG/M
3300031573\|Ga0310915_11138157	Not Available	541	Open in IMG/M
3300031640\|Ga0318555_10421000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Solimonas → Solimonas soli	724	Open in IMG/M
3300031668\|Ga0318542_10517784	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	620	Open in IMG/M
3300031668\|Ga0318542_10611885	Not Available	568	Open in IMG/M
3300031679\|Ga0318561_10649367	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300031680\|Ga0318574_10649361	All Organisms → cellular organisms → Bacteria → Proteobacteria	618	Open in IMG/M
3300031680\|Ga0318574_10661906	Not Available	612	Open in IMG/M
3300031681\|Ga0318572_10328022	All Organisms → cellular organisms → Bacteria → Proteobacteria	907	Open in IMG/M
3300031681\|Ga0318572_10459524	Not Available	758	Open in IMG/M
3300031713\|Ga0318496_10472836	Not Available	693	Open in IMG/M
3300031713\|Ga0318496_10614856	Not Available	600	Open in IMG/M
3300031719\|Ga0306917_10066786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2478	Open in IMG/M
3300031723\|Ga0318493_10242091	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300031744\|Ga0306918_10531259	Not Available	921	Open in IMG/M
3300031747\|Ga0318502_10173376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1239	Open in IMG/M
3300031747\|Ga0318502_10340739	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300031751\|Ga0318494_10501643	Not Available	707	Open in IMG/M
3300031751\|Ga0318494_10736207	Not Available	577	Open in IMG/M
3300031768\|Ga0318509_10193365	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1130	Open in IMG/M
3300031768\|Ga0318509_10679707	Not Available	572	Open in IMG/M
3300031781\|Ga0318547_10604009	Not Available	680	Open in IMG/M
3300031793\|Ga0318548_10320339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	761	Open in IMG/M
3300031797\|Ga0318550_10364530	Not Available	700	Open in IMG/M
3300031797\|Ga0318550_10611182	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300031798\|Ga0318523_10402849	Not Available	680	Open in IMG/M
3300031799\|Ga0318565_10109761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Scytonemataceae → Scytonema → unclassified Scytonema → Scytonema sp. NIES-4073	1326	Open in IMG/M
3300031821\|Ga0318567_10475240	All Organisms → cellular organisms → Bacteria → Terrabacteria group	709	Open in IMG/M
3300031846\|Ga0318512_10333103	Not Available	757	Open in IMG/M
3300031860\|Ga0318495_10403329	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	602	Open in IMG/M
3300031879\|Ga0306919_10217348	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300031879\|Ga0306919_10469128	Not Available	969	Open in IMG/M
3300031879\|Ga0306919_10573553	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	870	Open in IMG/M
3300031880\|Ga0318544_10145824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	906	Open in IMG/M
3300031880\|Ga0318544_10193983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	783	Open in IMG/M
3300031880\|Ga0318544_10308331	Not Available	614	Open in IMG/M
3300031890\|Ga0306925_10755953	Not Available	1012	Open in IMG/M
3300031896\|Ga0318551_10186264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1144	Open in IMG/M
3300031896\|Ga0318551_10683227	Not Available	594	Open in IMG/M
3300031941\|Ga0310912_10596543	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	859	Open in IMG/M
3300031942\|Ga0310916_10070150	All Organisms → cellular organisms → Bacteria	2739	Open in IMG/M
3300031942\|Ga0310916_11049836	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	678	Open in IMG/M
3300031942\|Ga0310916_11364303	Not Available	582	Open in IMG/M
3300031959\|Ga0318530_10198533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	823	Open in IMG/M
3300032009\|Ga0318563_10048927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2164	Open in IMG/M
3300032043\|Ga0318556_10711431	Not Available	522	Open in IMG/M
3300032044\|Ga0318558_10326489	Not Available	760	Open in IMG/M
3300032055\|Ga0318575_10369893	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300032059\|Ga0318533_11066007	Not Available	592	Open in IMG/M
3300032060\|Ga0318505_10317622	All Organisms → cellular organisms → Bacteria → Terrabacteria group	735	Open in IMG/M
3300032076\|Ga0306924_11372959	Not Available	755	Open in IMG/M
3300032090\|Ga0318518_10215695	Not Available	983	Open in IMG/M
3300032174\|Ga0307470_11371027	Not Available	582	Open in IMG/M
3300032261\|Ga0306920_100169012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3260	Open in IMG/M
3300032261\|Ga0306920_101765061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	874	Open in IMG/M
3300032261\|Ga0306920_103572866	Not Available	573	Open in IMG/M
3300032261\|Ga0306920_103613149	Not Available	569	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.42%
Host-Associated	Host-Associated	2.58%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.77%
Plants	Host-Associated → Plants	2.58%
Aquatic	Environmental → Aquatic	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.94%
Sediment	Environmental → Aquatic → Sediment	0.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.65%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.71%
Loam	Environmental → Terrestrial → Soil → Loam	18.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	51.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.65%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.29%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.65%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.65%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.65%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_02843970	2140918013	Soil	VTQVTYDAAFSSYIPDHEMHPPAKESVMTWSSDRTSVLLYAILATLLVMAWIYVPA
INPhiseqgaiiFebDRAFT_1004307542	3300000364	Soil	VKQITYXAPLXSYLPDNEMHPFGRRREXMTWSSDSTSVLLYAILATLFVMSWIYVPA*
Ga0066395_100113003	3300004633	Tropical Forest Soil	VTQITYNAPLSSYVTHDVSLWKKEEVMTWSSDSTSVLLYAILATLFVVSWIYVPA*
Ga0066395_102038801	3300004633	Tropical Forest Soil	VTQITYDAPLSSYVPDNEMHPFGRRREVMTWSSDSTSVLLYAILATLFVMSWIYIPA*
Ga0066823_100831532	3300005163	Soil	VTQVTYDAAFSSYIPDYEMHPPAKESVMTWSSDRTSVLLYAILATLLVVAWIYVPA*
Ga0066869_100133812	3300005165	Soil	VTQVTYDAAFSSYIPDHEMHPPAKESVMTWSSDRTSVLLYAILATLLVVAWIYVPA*
Ga0066388_1027493832	3300005332	Tropical Forest Soil	VTQVTYDAALSSYIPEHEMHPPAKESVMTWSSDRTSILLYAILATLLVMAWIYVPA*
Ga0066388_1049173251	3300005332	Tropical Forest Soil	MQITYDAALSSYVPDNEMQSFGRRRAAMTWSSDRTGVLLYAI
Ga0008090_100096101	3300005363	Tropical Rainforest Soil	PLSSYVPDNEMHPFGRRREVMTWSSDSTSVLLYAILATLFVMSWIYIPA*
Ga0070713_1001343422	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	SSYLRDEEIHPSAKESVMTWSSDRTSVLLYALLATLLVMAWIYVPA*
Ga0070713_1013543731	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VTQITYGAAFCSYVPDQDMHSFGRRRGAMTWTSDRTGVLLYAIL
Ga0070706_1002548171	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VQSVTQVTYGAAFSSYLRDEEMHPSAKESVMTWSSDRTSVLLYAILATLLVMAWIYVPA*
Ga0070707_1003617613	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VTQVTYGAAFSSYLRDEEMHPSAKESVMTWSSDRTSVLLYAILAT
Ga0066905_1003067294	3300005713	Tropical Forest Soil	MQITYDAALSSYVPDNEMHSFGRRRDAMTWSSDRTGVLLYAVLGTLLVMSWIYVPA*
Ga0066905_1005822101	3300005713	Tropical Forest Soil	VTQITYDAPLSSYVPDNEMHLFGTRRQVMTWSSDSMSVLLYAILATLFVMSWIYVPA*
Ga0066905_1006946081	3300005713	Tropical Forest Soil	MQITYDAALSSYVLDNEMHPFGRRKDAMTWSSDSTSILLYAILATLFAMSWIYIPA*
Ga0066905_1012605562	3300005713	Tropical Forest Soil	MQITYDVALCSYVPDHEMHSFERRRAAMTWSSDRTSVLLYAILATL
Ga0066905_1020250221	3300005713	Tropical Forest Soil	VTQITYDTPLSSYVPDNEMHLFGTRRLVMTWSSDSMSVLLYAILATLFVM
Ga0066903_1001574393	3300005764	Tropical Forest Soil	VTQITYDAALSAYVPDHEMHPWGRRREAMTWTSDSAGVLLYAILGTLLVMSWIYVPA*
Ga0066903_1013110593	3300005764	Tropical Forest Soil	VTQITYDAPLSSYVPDNEMHPFGRRREVMTWSSDSMSVLLYAILATLFVMSWIYVPA*
Ga0066903_1020216231	3300005764	Tropical Forest Soil	MQITYDAALCSYVPDHEMHSFGRRRAAMTWSSERTSVLLYAILATLLVMSWIYVPA*
Ga0066903_1041005542	3300005764	Tropical Forest Soil	MRKNVTKITYDPALSSYVPDNEIHPLGRRRHAMTWTS
Ga0066903_1047439882	3300005764	Tropical Forest Soil	VTQITYDAPLSSYVPDNEMRPFGRRREVMTWSSDSTSVLLYAILATLFVMSWIYIPA*
Ga0066903_1048565251	3300005764	Tropical Forest Soil	VTQITYDGKLFSYVPDHEMHPFGRRKKVMTWSSDSTSVLLYAILATLFVMSWIYVPA*
Ga0066903_1056279862	3300005764	Tropical Forest Soil	VTQITFDAPLSSYVPDNEMHPFGKRSEVMTWSSDSTSVLLYAILATLFVMSWIYIPA*
Ga0066903_1087457661	3300005764	Tropical Forest Soil	YDTALCSYVTDHEMHSFGRRRAAMTWSSDRTSVLVYAVLATLLVVAWIYVPA*
Ga0066903_1089472232	3300005764	Tropical Forest Soil	HEMHPPAKESVMTWSSDRTSVLLYAILATLLVMAWIYVPA*
Ga0066652_1003536581	3300006046	Soil	SPKESVMTWSSDRTSVLFYAILATLLVMAWIYVPA*
Ga0075018_101302073	3300006172	Watersheds	VTRITYDAPLSSYVPDNEMHPFERRREVMTWRSDSTSVLLYAILATLFVMSWIYVPA*
Ga0075433_104390682	3300006852	Populus Rhizosphere	VTQITYDAAFSSYLPDEEMHPSAKESVMTWSSDRTSVLLYAILATLLVRAWIYVPA*
Ga0075434_1004619782	3300006871	Populus Rhizosphere	VTQITYGAAFSSYLPDQEMHPSAKESVMAWSSDRTSVLLYAILATLLVMAWIYVPA*
Ga0075424_1020986742	3300006904	Populus Rhizosphere	AAQSVKQITYDAPLSSYVPDNEMHPFGRRREVMTWSSDSTSVLLYAILATLFVMSWIYVPA*
Ga0099827_104083542	3300009090	Vadose Zone Soil	VTQITYGAAFSSYVLDQEMHPSAKESVMTWSSDRTSVLLYAILATLLVMAWIYVPA*
Ga0126374_108616662	3300009792	Tropical Forest Soil	VTQVTYDAALSSYIPEHEMHPPAKESVMTWSSDRTSVLLYAILATLLVMAWIYVPA*
Ga0126374_114087201	3300009792	Tropical Forest Soil	VTQITFDAPLSSYVPDNEMHPFGKRSEVMTWSSDSTSVLLY
Ga0126380_101009262	3300010043	Tropical Forest Soil	MQITYDAALCSYVPDHKMHSFERRRAAMTWSSDRTSVLLYAILATLLVMSWIYVPA*
Ga0126380_103906952	3300010043	Tropical Forest Soil	MQITYDAALSSYVPDNEMHSFGRRREAMTWSSDRTGVLLYAILGTLLVMSWIYVPA*
Ga0126380_118754812	3300010043	Tropical Forest Soil	VTQITYDAPLSSYVPDNEMHPFGRRREVMTWSSDSTSVLLYAILATLFVLSWVYVPA*
Ga0126384_109571701	3300010046	Tropical Forest Soil	VTQITYDAPLSSYVPDNEMHPFGRRREVMTWSSDSTSVLLYAILATLFVMSWIYVPA*
Ga0126382_100127285	3300010047	Tropical Forest Soil	MQITYDAALSSYVPHNEMHSFGRRREAMTWSSDRRGVLLYAILGTLL
Ga0126382_101541833	3300010047	Tropical Forest Soil	MQITYDAALSSYVPDNEMHSFGRRREAMTWSSDRRGVLLYAILGTLLVMSWIYVPA*
Ga0126373_110610231	3300010048	Tropical Forest Soil	VTQITYDAPLSSYVPDNEMHPFGRRREIMTWSSDSTSVLLYAILATLF
Ga0126373_125870172	3300010048	Tropical Forest Soil	VTQITYGAAFSSYVPDQEMHPSAKESVMTWTSDRTSILLYTILATLLVMAWIYVPA*
Ga0126370_106183841	3300010358	Tropical Forest Soil	QSVTQITYDAPLSSYVPDNEMHLFGTRRQVMIWSSDSMSVLLYAIVATLFVMSWIYVPA*
Ga0126370_106999212	3300010358	Tropical Forest Soil	MQITYDTALCSYVTDHEMHSFGRRRAAMTWSSDRTSVLLYAILATLLVMSWIYVPA*
Ga0126370_123227981	3300010358	Tropical Forest Soil	VTQVTYDAALSSYIPEHEMHPPAKESVMTWSSDRTSVLLYAILATLLVMS
Ga0126376_104356202	3300010359	Tropical Forest Soil	VTQVTYDAALSSYIPEHEMHPPAKESVMTWSSDRTSVLVYAVLATLLVVAWIYVPA*
Ga0126376_116453541	3300010359	Tropical Forest Soil	MQITYDTALCSYVTDQEMHSFGRRRAAMTWSSDRTSVLLYAILATLL
Ga0126372_121812792	3300010360	Tropical Forest Soil	VTQITYDAPLSSYVPDNEMHLFGTRRQVMIWSSDSMSVLLYAIVATLFVMSWIYVPA*
Ga0126372_123250271	3300010360	Tropical Forest Soil	MQITCDAALSSYVPDNEMHSFGRRREAMTWSSDRTGVLLYAILGTLLVMSWIYVPA*
Ga0126377_104903613	3300010362	Tropical Forest Soil	MQITYDAALCSYVPDHEMHSFERRRAAMTWSSDRTSVLLYAILATLLVMSWIYVPA*
Ga0126379_101428242	3300010366	Tropical Forest Soil	VTKITYDPALSSYVPDNEIHPLGRRRHAMTWTSDSTGVLLYAILGTLLVMSWIYIPA*
Ga0124850_10191812	3300010863	Tropical Forest Soil	MQITYETALCSYVTDHEMHFFGIRRAAMTWSSDRTSVLVYAVLATLLVVAWIYVPA*
Ga0124850_11051723	3300010863	Tropical Forest Soil	VKQITYDAPLSSYVPDNEMHPFGRRREVMTWSSDSTSVLLYAILATLFVMSWIYVPA*
Ga0137389_101397912	3300012096	Vadose Zone Soil	CSYLPDEEIHPPAKESVMTWSSDRTSVVLYAILATLLVMAWIYVPA*
Ga0137382_100366431	3300012200	Vadose Zone Soil	VTQITYGAAFSSYLPDQEMHPSAKESVMTWSSDRTSVLLYAILATLLVMAWIYVPA*
Ga0137382_112600852	3300012200	Vadose Zone Soil	TQITYGAAFSSYLPDQEMHPSPKESVMTWSSDRTSVLLYAILATLLVMAWIYVPA*
Ga0137385_107556611	3300012359	Vadose Zone Soil	EMHPSPKESVMTWSSDRTSVLFYAILATLLVMAWIYVPA*
Ga0137358_100340004	3300012582	Vadose Zone Soil	FSSYLPDQEMHPSAKESVMTWSSDRTSVLLYAILATLLVMAWIYVPA*
Ga0164303_103993852	3300012957	Soil	VTQVTYDAALSSYIPDHEMHPPAKESVMTWSSDRTSVLLYAILATLLVMAWIYVPA*
Ga0164302_101231052	3300012961	Soil	VTQITYDAPLSSYLPDNEMHPLERRREVMTWRSDSTSVLLYAILATLFVMSWIYVPA*
Ga0126369_103651973	3300012971	Tropical Forest Soil	VTQITYDAPLSSYVPDNEMHLFGTRRQVMTWSSDSMSVLLYAILATLFVMSWIY
Ga0126369_112311292	3300012971	Tropical Forest Soil	VNQVTYDAALSSYIPEHEMHPPAKESVMTWSSDRTSVLLYAILATLLVMAWIYVPA*
Ga0126369_131885531	3300012971	Tropical Forest Soil	MQITYDTALCSYVTDHEMHSFGRRRAAMTWSSDRTSVLLYAILATLFVMSWIYVPA*
Ga0126369_134038022	3300012971	Tropical Forest Soil	ITYDAALSAYVPDHEMHPWGRRREAMTWTSDSAGVLLYAILGTLLVMSWIYVPA*
Ga0164304_118788382	3300012986	Soil	VKQITYDAPLSSYVPDNEMHPFGRRREVMTWSSDRTRVLLYAILATLFVVAWI
Ga0164307_116218471	3300012987	Soil	SYIPDHEMHPRAKESVMTWSSDPTSVLLYAILATLLVMAWIYVPA*
Ga0132258_103841712	3300015371	Arabidopsis Rhizosphere	VTQITYDAAFSSYLPDQEMHPSAKESVMTWSSDRTSVLLYAILATLLVMAWIYVPA*
Ga0182036_110395913	3300016270	Soil	GRQKPKNVMQITYDAALSSYVPDNEMHSFGRRREAMTFSSDRTGVLLYAVLGTLLVMSWIYVPA
Ga0182041_104423861	3300016294	Soil	YDAALCSYVPDHEMHSFGRRRAAMTWSSDRTGVLLYAVVGTLLVMSWIYVPA
Ga0182035_102050952	3300016341	Soil	VTQITYDAPLSSYVPDNEMHPFGRRREVMTWSSDSTSVLLYAILA
Ga0182035_107813901	3300016341	Soil	MQITYDAALCSYVPDHEMYSFGRRRAAMTWSSERTSVLLYAILATLLVMSWIYVPA
Ga0182032_101166992	3300016357	Soil	MHPSAKESVMTWSSDRTSVLLYAILATLLVMAWIYVPA
Ga0182034_109421612	3300016371	Soil	APLSSYVPDNEMHPFGRRREVMTWSSDSTSVLLYAILAMLFVMSWIYVPA
Ga0182034_117837822	3300016371	Soil	APLSSYVPDNEMHPFGRRREVMTWSSDSTSVLLYAILATLFVMSWIYIPA
Ga0182040_109363601	3300016387	Soil	CSYVPDNEMHSFGRRRAAMTWSSDRTSVLLYAILATLLVMSWIYVPA
Ga0182040_111091891	3300016387	Soil	VTQITYDAPLSSYVPDNEMHLFGTRRQVMTWSSDSMSVLLYAI
Ga0182037_105237731	3300016404	Soil	AKAQNVMQITYATALCSYVTDHEMHSFGRSRAAMTWSSDRTSVLLYAILATLLVMSWIYVPA
Ga0182038_101372542	3300016445	Soil	TALCSYVTDHEMHSFGRRRAAMTWSSDRTSVLLYAILATLLVMSWIYVPA
Ga0182038_102930611	3300016445	Soil	MQITYDAALSSYVPDNEMHSFGRRRAAMTWSSDRTGVLLYAI
Ga0210399_101241383	3300020581	Soil	VTQVTYDAALSSYIPDHEMHPPAKESVMTWSSDRTSVLLYAILATLLVM
Ga0210410_111495072	3300021479	Soil	VTQITYDAPLSSYVPDNEMHPFGRRREFMSWSSDSTSVLLYTIPAALFVMSWIYVPA
Ga0126371_108556632	3300021560	Tropical Forest Soil	MQITYDAALCSYVPDHEMHSFGRRRAAMTWSSERTSVLLYAILATLLVMSWIYVPA
Ga0126371_114326962	3300021560	Tropical Forest Soil	VTQITYDAPLSSYVPDNEMRLFGTRRQVMTWSSDSMSVLLYAILATLFVMSWIYVPA
Ga0207646_111947951	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VTQVTYGAAFSSYLRDEEMHPSAKESVMTWSSDRTSVLLYAILATLLVMAW
Ga0209465_102258521	3300027874	Tropical Forest Soil	VTQITYDAPFSSYVPDNEMHLFGTRRQVMTWSSDSMSVLLYAILATLFVMSWIYVPA
Ga0209465_102835911	3300027874	Tropical Forest Soil	SVTQITYNAPLSSYVTHDVSLWKKEEVMTWSSDSTSVLLYAILATLFVVSWIYVPA
Ga0209465_106058281	3300027874	Tropical Forest Soil	TYDAPLSSYVPDNEMHPFGRRREVMTWSSDSTSVLLYAILATLFVMSWIYIPA
Ga0209590_103535502	3300027882	Vadose Zone Soil	VTQITYGAAFSSYVLDQEMHPSAKESVMTWSSDRTSVLLYAILATLLVMAWIYVPA
Ga0318516_102215782	3300031543	Soil	VTQITYDAPLSSYVPDNEMHPFGRRREVMTWSSDSMSVLLYAILATLFVMSWIYVPA
Ga0318516_105166941	3300031543	Soil	MQITYDTALCSYVTDHEMHSFGRRRAAMTWSSDRTSVLLYAILATLLVMSWIYVPA
Ga0318516_105631671	3300031543	Soil	RHPSAKESVMTWISDRTSVLLYAILATLLVMAWIYVPA
Ga0318534_106150591	3300031544	Soil	NVMQITYDAALSPYVPRNEMHSFGRRREAMTWSSDRTGVLLYPILGTLLVMSWIYVPA
Ga0318541_101307202	3300031545	Soil	VTQITYDASLSSYFPDNEMHPFGRRREVMTWSSDSTSVLLYAILATLFVMSWIYIPA
Ga0318541_102602641	3300031545	Soil	VTQITHDAPLSSYVPDNEMHPFGRRREVMTWSSDSMSVLLYAILATLFVMSWICIPA
Ga0318538_107051901	3300031546	Soil	SQNKEMHPSAKESVMTWSSDRTSVLLYAILATLLVMAWIYVPA
Ga0318528_101380173	3300031561	Soil	VTQITYDAPLFSYVPDHEMHPFGRRKEVMTWSSDSTSVLLYAILATLFVMSWIYVPA
Ga0318528_105613212	3300031561	Soil	MQITYDAALCSYVPDHEMHSFGRRRAAMTWSSDRTGVLLYAVLGTLLVMSWIYVPA
Ga0310915_101217743	3300031573	Soil	MQITYDAALSSYVPDNEMHSFGRRRAAMTWSSDRTGVLLYAILATFFVMSWIYVPS
Ga0310915_111381572	3300031573	Soil	ITYDTALCSYVTDHEMHSFGRRRAAMTWSSDRTSVLLYAILATLLVMSWIYVPA
Ga0318555_104210002	3300031640	Soil	MQITYDAALCSYVPDHEMHSFGRRRAAMTWSSDRTGVLLYAV
Ga0318542_105177842	3300031668	Soil	DAPLSSYVPDNEMHPFGRRREVMAWSSDSTGVLLYAIIVTLFVMSWIYIPA
Ga0318542_106118851	3300031668	Soil	VTQITYDAPLSSYVPDNEMHPFGRRREVMTWSSDSTSVLLYAILATLFVMSW
Ga0318561_106493671	3300031679	Soil	MQITYDAALSSYVPDNEMHSFGRRRAAMTWSSDRTGVLLYAILATFFV
Ga0318574_106493611	3300031680	Soil	VTQVTYGAAFSSYVPDQKRHPSAKESVMTWISDRTSVLLY
Ga0318574_106619061	3300031680	Soil	ITYGAAFSSYLPDQQMHPSAKESVMTWSSDRTSVLLYAILATLLVMAWIYVPA
Ga0318572_103280221	3300031681	Soil	VTQVTYGAAFSSYVPDQKRHPSAKESVMTWISDRTSVLLYA
Ga0318572_104595242	3300031681	Soil	VTRITYGAAFSSYLPDQQMHPSAKESVMTWSSDRTSVLLYAILATLLVMAWIYVPA
Ga0318496_104728363	3300031713	Soil	MQITYDAALCSYVPDHEMHSFGRRRAAMTWSSDRTGVLLYAVVGTLLVMSWIYVPA
Ga0318496_106148561	3300031713	Soil	VTQITYDAPLFSYVPDHEMHPFGRRKEVMTWSSDSTSVLLYAILATLFVMSW
Ga0306917_100667863	3300031719	Soil	NVMQITYDAALSPYVPRNEMHSFGRRREAMTWSSDRTGVLLYAILGTLLVMSWIYVPA
Ga0318493_102420911	3300031723	Soil	VTQITYDAPLFSYVPDHEMHPFGRRKEVMTWSSDSTSVLLYAILATLFVMSWIY
Ga0306918_105312593	3300031744	Soil	VTQITYGAPLSSYVPDNEMHPFGRRREVMTWSSDSTSVLLYA
Ga0318502_101733761	3300031747	Soil	VTQITYDAPLSSYVPDNEMHPFGRRREVMTWSSDSTSVLLYAILAMLFVMSWIYVPA
Ga0318502_103407391	3300031747	Soil	VTQITYDAPLFSYVPDHEMHPFGRRKEVMTWSSDSTSVLLYAILATLFVMSWI
Ga0318494_105016431	3300031751	Soil	YDAALSPYVPRNEMHSFGRRREAMTWSSDRTGVLLYAILGTLLVMSWIYVPA
Ga0318494_107362071	3300031751	Soil	VTQITYDAPLSSYVPDNEMHPFGRRSEVMTWSSDSTSVLLY
Ga0318509_101933652	3300031768	Soil	VTQITYDAPLSSYVPDNEMHPFGRRSEVMTWSSDSTSVLLYAILATLFVMSWVYIPA
Ga0318509_106797072	3300031768	Soil	GWAPKAKAQNVMQITYDTALCSYVTDHEMHSFGRRRAAMTWSSDRTSVLLYAILATLLVMSWIYVPA
Ga0318547_106040092	3300031781	Soil	SSYLSDQQMHPSAKESVMTWSSDRTSVLLYAILATLLVMAWIYVPA
Ga0318548_103203392	3300031793	Soil	VTQITYDASLSSYVPDNEMHPFGRRREVMAWSSDTTSALLYAILATLFVMS
Ga0318550_103645301	3300031797	Soil	AAFSSYVPDQKRHPSAKESVMTWISDRTSVLLYAILATLLVKAWIYVPA
Ga0318550_106111822	3300031797	Soil	MQITYDAALSSYVPDNEMHSFGRRRAAMTWSSDRTGVLLYAILATFFVMSWIYVPA
Ga0318523_104028492	3300031798	Soil	HPSAKESVMTWSSDRTSVLLYAILATLLVMAWIYVPA
Ga0318565_101097611	3300031799	Soil	VTQITYDAPLSSYVPDNEMHPFGRRREVMTWSSDSMSVLLYA
Ga0318567_104752402	3300031821	Soil	VTQITYDAPLSSYVPDNEMHLFGTRRQVMTWSSDSMSVLLYAIVATLFVMSWIYVPA
Ga0318512_103331032	3300031846	Soil	QSVTQVTYGAAFSSYVPDQKRHPSAKESVMTWISDRTSVLLYAILATLLVMAWIYVPA
Ga0318495_104033292	3300031860	Soil	QITSDAPLSSYVPDNEMHPFGRRREVMTWSSDSTSVLLYAILATLFVMSWIYIPA
Ga0306919_102173483	3300031879	Soil	VTQITYDAPLFSYVPDHEMHPFGRRKEVMTWSSDSTSVLLYA
Ga0306919_104691281	3300031879	Soil	VTQITYGAPLSSYVPDNEMHPFGRRREVMTWSSDSTSVLLYAILAMLFVMSWIYVPA
Ga0306919_105735531	3300031879	Soil	VTQITYDAPLSSYVPDNEMHLFGTRRQVMTWSSDSMSVLLYAILATLFVMSWIYVPA
Ga0318544_101458241	3300031880	Soil	VTQITYDAPLSSYVPDNEMHPFGRRREVMTWSSDSTSVL
Ga0318544_101939831	3300031880	Soil	VTQITYDASLSSYVPDNEMHPFGRRREVMAWSSDTTSALLYAILATLFVMSWLYVPA
Ga0318544_103083311	3300031880	Soil	VTQITYGAPLSSYVPDNEMHPFGRRREVMTWSSDSTSVLLYAILAMLFVMSW
Ga0306925_107559531	3300031890	Soil	VMQITYATALCSYVTDHEMHSFGRRRAAMTWSSDRTSVLLYAILATLLVMSWIYVPA
Ga0318551_101862642	3300031896	Soil	VTQITHDAPLSSYVPDNEMHPFGRRREVMTWSSDSMSVLLYAILATLFVMSWIYVPA
Ga0318551_106832271	3300031896	Soil	VTQITYDAPLSSYVPDNEMHPFGRRREVMAWSSDSTGVLL
Ga0310912_105965431	3300031941	Soil	SLSSYVPDNEMHPFGRRREVMAWSSDTTSALLYAILATLFVMSWLYVPA
Ga0310916_100701501	3300031942	Soil	MQITYDAALSSYVPDNEMHSFGRRRAAMTWSSDRTGVLLYAILATFFVMS
Ga0310916_110498362	3300031942	Soil	TYDAPLSSYVPDNEMHPFGRRREVMTWSFDSTSVLLYAILATLFVMSWIYVPA
Ga0310916_113643031	3300031942	Soil	QITYDAALSSYVPDNEMHSFGRRRAAMTWSSDRTGVLLYAILATFFVMSWIYVPA
Ga0318530_101985332	3300031959	Soil	AAFSSYVPDQKRHPSANKSVMTWISDRTSVLLYAILATLLVMAWIYVPA
Ga0318563_100489271	3300032009	Soil	VTQITYDAPLSSYVPDNEMHPFGRRREVMTWSSDSTSVLLYAILATLFVMSWIYVPA
Ga0318556_107114311	3300032043	Soil	LSCASVTQITYDAPLFSYVPDHEMHPFGRRKEVMTWSSDSTSVLLYAILATLFVMSWIYVPA
Ga0318558_103264891	3300032044	Soil	VTQVTYGAAFSSYVLDQKRHPSAKESVMTWISDRTSVLLYAILATLLVMAWIYVPA
Ga0318575_103698931	3300032055	Soil	MQITYDAALCSYVPDHEMHSFGRRRAAMTWSSDRTGVLLYAILGTLLVMSWIYVPA
Ga0318533_110660071	3300032059	Soil	ITYDAALCSYVPDHEMYSFGRRRAAMTWSSERTSVLLYAILATLLVMSWIYVPA
Ga0318505_103176221	3300032060	Soil	VTQITYDAPLSSYVPDNEMHLFGTRRQVMTWSSDSMSVLLYAIVATLFVM
Ga0306924_113729591	3300032076	Soil	RSQDGAPKAQNVMQITYDAALCSYVPDNEMHSFGRRRAAMTWSSDRTSVLLYAILATLLVMSWIYVPA
Ga0318518_102156951	3300032090	Soil	VMQITYDAALSSYVPDNEMHSFGRRRAAMTWSSDRTGVLLYAILATFFVMSWIYVPA
Ga0307470_113710271	3300032174	Hardwood Forest Soil	VTQITYDAPLSSYLPDNEMHPLERRREVMTWRSDSTSVLLYAILATLFVVAWIYVPA
Ga0306920_1001690121	3300032261	Soil	VKQITYDAPLSSYVPDNEMHPFVRGREVMTWSSDRTSVLLYAILATLFVMSWIYVPA
Ga0306920_1017650611	3300032261	Soil	VTQITHDAPLSSYVPDNEMHPFGRRREVMTWSSDSMSVLLYAI
Ga0306920_1035728662	3300032261	Soil	AALCSYVPDHEMYSFGRRRAAMTWSSERTSVLLYAILATLLVMSWIYVPA
Ga0306920_1036131491	3300032261	Soil	NVMQITYDAALCSYVPDNEMHSFGRRRAAMTWSSDRTSVLLYAILATLLVMSWIYVPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F044134

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences