NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F043515

Metagenome / Metatranscriptome Family F043515

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F043515
Family Type Metagenome / Metatranscriptome
Number of Sequences 156
Average Sequence Length 44 residues
Representative Sequence FMLARAIALREGTASGEAPLFYWAKNARRIGVCREAVGTT
Number of Associated Samples 119
Number of Associated Scaffolds 156

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 4.49 %
% of genes near scaffold ends (potentially truncated) 91.03 %
% of genes from short scaffolds (< 2000 bps) 91.03 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (74.359 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(44.231 % of family members)
Environment Ontology (ENVO) Unclassified
(53.846 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.641 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 26.47%    β-sheet: 0.00%    Coil/Unstructured: 73.53%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 156 Family Scaffolds
PF07690MFS_1 11.54
PF13602ADH_zinc_N_2 6.41
PF00484Pro_CA 2.56
PF00083Sugar_tr 1.92
PF13847Methyltransf_31 1.28
PF00903Glyoxalase 1.28
PF13416SBP_bac_8 1.28
PF00296Bac_luciferase 1.28
PF13649Methyltransf_25 1.28
PF01474DAHP_synth_2 1.28
PF04248NTP_transf_9 0.64
PF08028Acyl-CoA_dh_2 0.64
PF01177Asp_Glu_race 0.64
PF00011HSP20 0.64
PF05088Bac_GDH 0.64
PF01909NTP_transf_2 0.64
PF00211Guanylate_cyc 0.64
PF00180Iso_dh 0.64
PF03241HpaB 0.64
PF10049DUF2283 0.64
PF13751DDE_Tnp_1_6 0.64
PF07883Cupin_2 0.64
PF00441Acyl-CoA_dh_1 0.64
PF06863DUF1254 0.64
PF13442Cytochrome_CBB3 0.64
PF03928HbpS-like 0.64
PF03466LysR_substrate 0.64
PF00536SAM_1 0.64

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 156 Family Scaffolds
COG0288Carbonic anhydraseInorganic ion transport and metabolism [P] 2.56
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 1.28
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 1.28
COG32003-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, class IIAmino acid transport and metabolism [E] 1.28
COG0071Small heat shock protein IbpA, HSP20 familyPosttranslational modification, protein turnover, chaperones [O] 0.64
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.64
COG2343Uncharacterized conserved protein, DUF427 familyFunction unknown [S] 0.64
COG2368Aromatic ring hydroxylaseSecondary metabolites biosynthesis, transport and catabolism [Q] 0.64
COG2902NAD-specific glutamate dehydrogenaseAmino acid transport and metabolism [E] 0.64
COG5361Uncharacterized conserved proteinMobilome: prophages, transposons [X] 0.64


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms74.36 %
UnclassifiedrootN/A25.64 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459002|FZY7DQ102G7GRCAll Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium524Open in IMG/M
3300004082|Ga0062384_100008018All Organisms → cellular organisms → Bacteria → Proteobacteria3892Open in IMG/M
3300005186|Ga0066676_10031508All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2885Open in IMG/M
3300005332|Ga0066388_101612996Not Available1142Open in IMG/M
3300005332|Ga0066388_102208039All Organisms → cellular organisms → Bacteria → Proteobacteria993Open in IMG/M
3300005467|Ga0070706_101075413All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300005542|Ga0070732_10445525All Organisms → cellular organisms → Bacteria → Proteobacteria783Open in IMG/M
3300005576|Ga0066708_10198206All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1258Open in IMG/M
3300005610|Ga0070763_10579458All Organisms → cellular organisms → Bacteria → Proteobacteria649Open in IMG/M
3300005921|Ga0070766_10137771All Organisms → cellular organisms → Bacteria → Proteobacteria1482Open in IMG/M
3300006175|Ga0070712_101574105Not Available575Open in IMG/M
3300006800|Ga0066660_10725584All Organisms → cellular organisms → Bacteria → Proteobacteria813Open in IMG/M
3300010046|Ga0126384_11574790All Organisms → cellular organisms → Bacteria → Proteobacteria618Open in IMG/M
3300010047|Ga0126382_10488623All Organisms → cellular organisms → Bacteria → Proteobacteria986Open in IMG/M
3300010047|Ga0126382_10663920All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium868Open in IMG/M
3300010360|Ga0126372_11529145All Organisms → cellular organisms → Bacteria → Proteobacteria704Open in IMG/M
3300010361|Ga0126378_10120047All Organisms → cellular organisms → Bacteria2631Open in IMG/M
3300010361|Ga0126378_12840764All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium553Open in IMG/M
3300010376|Ga0126381_100033655All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6142Open in IMG/M
3300010376|Ga0126381_100625596All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1534Open in IMG/M
3300010376|Ga0126381_102926535All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium680Open in IMG/M
3300010376|Ga0126381_104904899Not Available514Open in IMG/M
3300010398|Ga0126383_10131203All Organisms → cellular organisms → Bacteria → Proteobacteria2304Open in IMG/M
3300011270|Ga0137391_10596493All Organisms → cellular organisms → Bacteria → Proteobacteria926Open in IMG/M
3300012202|Ga0137363_10871395All Organisms → cellular organisms → Bacteria → Proteobacteria764Open in IMG/M
3300012205|Ga0137362_10511312All Organisms → cellular organisms → Bacteria → Proteobacteria1038Open in IMG/M
3300012211|Ga0137377_10413105All Organisms → cellular organisms → Bacteria → Proteobacteria1287Open in IMG/M
3300012361|Ga0137360_10243908All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1472Open in IMG/M
3300012363|Ga0137390_10829248All Organisms → cellular organisms → Bacteria882Open in IMG/M
3300012918|Ga0137396_11205408All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium533Open in IMG/M
3300012923|Ga0137359_10428897All Organisms → cellular organisms → Bacteria1171Open in IMG/M
3300012923|Ga0137359_10482582All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1095Open in IMG/M
3300012971|Ga0126369_10828268Not Available1009Open in IMG/M
3300016270|Ga0182036_11134899All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AS23.2648Open in IMG/M
3300016270|Ga0182036_11756366Not Available524Open in IMG/M
3300016294|Ga0182041_11466752All Organisms → cellular organisms → Bacteria → Proteobacteria627Open in IMG/M
3300016319|Ga0182033_10190826All Organisms → cellular organisms → Bacteria → Proteobacteria1622Open in IMG/M
3300016319|Ga0182033_10881386All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium792Open in IMG/M
3300016341|Ga0182035_10046898All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2907Open in IMG/M
3300016341|Ga0182035_12150640Not Available506Open in IMG/M
3300016357|Ga0182032_10721486All Organisms → cellular organisms → Bacteria → Proteobacteria838Open in IMG/M
3300016357|Ga0182032_11108597All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300016357|Ga0182032_11331188All Organisms → cellular organisms → Bacteria → Proteobacteria620Open in IMG/M
3300016357|Ga0182032_11335775Not Available619Open in IMG/M
3300016371|Ga0182034_10156911All Organisms → cellular organisms → Bacteria1716Open in IMG/M
3300016422|Ga0182039_10305741All Organisms → cellular organisms → Bacteria1319Open in IMG/M
3300016422|Ga0182039_11498060Not Available614Open in IMG/M
3300016445|Ga0182038_11832139All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300017823|Ga0187818_10560545All Organisms → cellular organisms → Bacteria → Proteobacteria515Open in IMG/M
3300018468|Ga0066662_11426301All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium718Open in IMG/M
3300020583|Ga0210401_11518901All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium527Open in IMG/M
3300021088|Ga0210404_10393754Not Available774Open in IMG/M
3300021168|Ga0210406_10981513Not Available630Open in IMG/M
3300021178|Ga0210408_10464477All Organisms → cellular organisms → Bacteria → Proteobacteria1007Open in IMG/M
3300021401|Ga0210393_11632961Not Available511Open in IMG/M
3300021403|Ga0210397_10893650All Organisms → cellular organisms → Bacteria → Proteobacteria688Open in IMG/M
3300021404|Ga0210389_10893608All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium692Open in IMG/M
3300021405|Ga0210387_10689324All Organisms → cellular organisms → Bacteria906Open in IMG/M
3300021420|Ga0210394_11506313All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium569Open in IMG/M
3300021560|Ga0126371_11297843All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales861Open in IMG/M
3300021560|Ga0126371_11867589Not Available721Open in IMG/M
3300022523|Ga0242663_1004809All Organisms → cellular organisms → Bacteria → Proteobacteria1599Open in IMG/M
3300022528|Ga0242669_1056530All Organisms → cellular organisms → Bacteria → Proteobacteria683Open in IMG/M
3300025929|Ga0207664_10678738Not Available926Open in IMG/M
3300027701|Ga0209447_10191378Not Available560Open in IMG/M
3300027767|Ga0209655_10226447Not Available612Open in IMG/M
3300027773|Ga0209810_1030013All Organisms → cellular organisms → Bacteria → Proteobacteria3244Open in IMG/M
3300027855|Ga0209693_10199753All Organisms → cellular organisms → Bacteria → Proteobacteria984Open in IMG/M
3300027884|Ga0209275_10097515All Organisms → cellular organisms → Bacteria → Proteobacteria1499Open in IMG/M
3300027903|Ga0209488_10685914All Organisms → cellular organisms → Bacteria → Proteobacteria735Open in IMG/M
3300028906|Ga0308309_10131082All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1990Open in IMG/M
3300029636|Ga0222749_10305495Not Available824Open in IMG/M
3300029701|Ga0222748_1004059All Organisms → cellular organisms → Bacteria → Proteobacteria1614Open in IMG/M
3300030531|Ga0210274_1021502Not Available739Open in IMG/M
3300030740|Ga0265460_10680831All Organisms → cellular organisms → Bacteria → Proteobacteria867Open in IMG/M
3300030967|Ga0075399_11437104Not Available526Open in IMG/M
3300031231|Ga0170824_123907092All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300031231|Ga0170824_127588099Not Available519Open in IMG/M
3300031446|Ga0170820_14230397All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria615Open in IMG/M
3300031469|Ga0170819_11877285Not Available536Open in IMG/M
3300031543|Ga0318516_10031888All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2786Open in IMG/M
3300031545|Ga0318541_10173459Not Available1189Open in IMG/M
3300031549|Ga0318571_10469780All Organisms → cellular organisms → Bacteria → Proteobacteria502Open in IMG/M
3300031561|Ga0318528_10644798Not Available567Open in IMG/M
3300031564|Ga0318573_10070373All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1747Open in IMG/M
3300031640|Ga0318555_10448400Not Available699Open in IMG/M
3300031668|Ga0318542_10139297All Organisms → cellular organisms → Bacteria1198Open in IMG/M
3300031679|Ga0318561_10739862All Organisms → cellular organisms → Bacteria → Proteobacteria540Open in IMG/M
3300031681|Ga0318572_10748856Not Available581Open in IMG/M
3300031708|Ga0310686_105493806All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2171Open in IMG/M
3300031708|Ga0310686_115181961Not Available824Open in IMG/M
3300031723|Ga0318493_10169568All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1139Open in IMG/M
3300031723|Ga0318493_10185017All Organisms → cellular organisms → Bacteria → Proteobacteria1094Open in IMG/M
3300031724|Ga0318500_10088942All Organisms → cellular organisms → Bacteria → Proteobacteria1388Open in IMG/M
3300031744|Ga0306918_10991930All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium653Open in IMG/M
3300031747|Ga0318502_10188054All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1191Open in IMG/M
3300031763|Ga0318537_10159775Not Available840Open in IMG/M
3300031763|Ga0318537_10268663Not Available632Open in IMG/M
3300031764|Ga0318535_10128407All Organisms → cellular organisms → Bacteria1123Open in IMG/M
3300031771|Ga0318546_10859650Not Available638Open in IMG/M
3300031771|Ga0318546_11104614Not Available557Open in IMG/M
3300031779|Ga0318566_10421885All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300031780|Ga0318508_1069867All Organisms → cellular organisms → Bacteria → Proteobacteria950Open in IMG/M
3300031781|Ga0318547_10596998All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria685Open in IMG/M
3300031793|Ga0318548_10425585Not Available651Open in IMG/M
3300031794|Ga0318503_10154803All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales739Open in IMG/M
3300031795|Ga0318557_10532715All Organisms → cellular organisms → Bacteria → Proteobacteria539Open in IMG/M
3300031805|Ga0318497_10145232All Organisms → cellular organisms → Bacteria → Proteobacteria1296Open in IMG/M
3300031805|Ga0318497_10456011All Organisms → cellular organisms → Bacteria → Proteobacteria716Open in IMG/M
3300031805|Ga0318497_10662065All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300031819|Ga0318568_10124251All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis1563Open in IMG/M
3300031831|Ga0318564_10305669All Organisms → cellular organisms → Bacteria → Proteobacteria702Open in IMG/M
3300031845|Ga0318511_10168918All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300031890|Ga0306925_10866914All Organisms → cellular organisms → Bacteria → Proteobacteria931Open in IMG/M
3300031890|Ga0306925_11158589All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium777Open in IMG/M
3300031893|Ga0318536_10632256Not Available534Open in IMG/M
3300031897|Ga0318520_10360307All Organisms → cellular organisms → Bacteria → Proteobacteria884Open in IMG/M
3300031910|Ga0306923_10327573All Organisms → cellular organisms → Bacteria → Proteobacteria1748Open in IMG/M
3300031912|Ga0306921_10140115All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales2825Open in IMG/M
3300031912|Ga0306921_10659560All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis1205Open in IMG/M
3300031912|Ga0306921_11184522All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. JA12-A1852Open in IMG/M
3300031912|Ga0306921_11357682All Organisms → cellular organisms → Bacteria → Proteobacteria783Open in IMG/M
3300031912|Ga0306921_12518881All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300031941|Ga0310912_10108549All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales2055Open in IMG/M
3300031945|Ga0310913_11147655All Organisms → cellular organisms → Bacteria → Proteobacteria542Open in IMG/M
3300031946|Ga0310910_10072880All Organisms → cellular organisms → Bacteria → Proteobacteria2483Open in IMG/M
3300031946|Ga0310910_10297670All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300031947|Ga0310909_10315331All Organisms → cellular organisms → Bacteria1311Open in IMG/M
3300031947|Ga0310909_10413048All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1133Open in IMG/M
3300031954|Ga0306926_11723831Not Available714Open in IMG/M
3300031954|Ga0306926_12104185All Organisms → cellular organisms → Bacteria → Proteobacteria631Open in IMG/M
3300031981|Ga0318531_10163952All Organisms → cellular organisms → Bacteria → Proteobacteria998Open in IMG/M
3300032001|Ga0306922_10156356All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2440Open in IMG/M
3300032001|Ga0306922_11962149Not Available571Open in IMG/M
3300032025|Ga0318507_10247117All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300032041|Ga0318549_10136875All Organisms → cellular organisms → Bacteria1085Open in IMG/M
3300032041|Ga0318549_10498236All Organisms → cellular organisms → Bacteria → Proteobacteria548Open in IMG/M
3300032042|Ga0318545_10172327All Organisms → cellular organisms → Bacteria → Proteobacteria772Open in IMG/M
3300032042|Ga0318545_10283627All Organisms → cellular organisms → Bacteria → Proteobacteria595Open in IMG/M
3300032064|Ga0318510_10127340All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria990Open in IMG/M
3300032065|Ga0318513_10222643All Organisms → cellular organisms → Bacteria → Proteobacteria911Open in IMG/M
3300032066|Ga0318514_10687879Not Available544Open in IMG/M
3300032068|Ga0318553_10766540All Organisms → cellular organisms → Bacteria → Proteobacteria505Open in IMG/M
3300032076|Ga0306924_10219665All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis2182Open in IMG/M
3300032091|Ga0318577_10549351Not Available550Open in IMG/M
3300032094|Ga0318540_10199523All Organisms → cellular organisms → Bacteria → Proteobacteria964Open in IMG/M
3300032160|Ga0311301_12816663All Organisms → cellular organisms → Bacteria → Proteobacteria531Open in IMG/M
3300032180|Ga0307471_102335616All Organisms → cellular organisms → Bacteria → Proteobacteria675Open in IMG/M
3300032180|Ga0307471_102490834Not Available655Open in IMG/M
3300032261|Ga0306920_100868628All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila → Rhodopila globiformis1320Open in IMG/M
3300032261|Ga0306920_102326919Not Available741Open in IMG/M
3300032515|Ga0348332_11741386Not Available503Open in IMG/M
3300032955|Ga0335076_11029618Not Available706Open in IMG/M
3300033289|Ga0310914_10541607All Organisms → cellular organisms → Bacteria → Proteobacteria1052Open in IMG/M
3300033289|Ga0310914_10958652All Organisms → cellular organisms → Bacteria → Proteobacteria755Open in IMG/M
3300033289|Ga0310914_11584865Not Available558Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil44.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil19.87%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil8.97%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.41%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil3.21%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.56%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.28%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.28%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.28%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.28%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.28%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.64%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.64%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.64%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.64%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.64%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.64%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.64%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459002Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cmEnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017823Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022523Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022528Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027701Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027767Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027773Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029701Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030531Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO143-VCO038SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030740Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assemblyEnvironmentalOpen in IMG/M
3300030967Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031763Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031779Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22EnvironmentalOpen in IMG/M
3300031780Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031793Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21EnvironmentalOpen in IMG/M
3300031794Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23EnvironmentalOpen in IMG/M
3300031795Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031831Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032025Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032042Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032091Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25EnvironmentalOpen in IMG/M
3300032094Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E1_052174902170459002Grass SoilMLARAIALRAGTAKGAAPLFYWAKNARRIGVCREDATDSGD
Ga0062384_10000801853300004082Bog Forest SoilRDVTRFMLARAIALRGGTASGAAPLFYWAKNARRIGVCREAASAP*
Ga0066676_1003150813300005186SoilFRDVTRFMLARAMALRDGTASGAAPLFYWAKNARRIGVCRESATTRPRSTIGNAR*
Ga0066388_10161299613300005332Tropical Forest SoilMLARAVALRQGTASGETPLFYWAKNARRIGICREAFSST*
Ga0066388_10220803913300005332Tropical Forest SoilTRFMLGRAIALRNGTATGQPPLFYWAKNARRMSICREAPG*
Ga0070706_10107541313300005467Corn, Switchgrass And Miscanthus RhizosphereMLARAIALRSGTATGEAPLFYWAKNARRVGVCREAGRAP*
Ga0070732_1044552533300005542Surface SoilFMLARAIAMREGTARAESPLFYTVQRKRRIGLCREAILDLQPQP*
Ga0066708_1019820623300005576SoilRAIALHSGTAKGESPLFYWAKNARRIGVCREGARAR*
Ga0070763_1057945813300005610SoilRDVTRFMLARAIALHGGTAKGEAPLFYWAKNARRIGICREGAGDIQAD*
Ga0070766_1013777123300005921SoilRDVTRFMLARAIALHGGTAKGEAPLFYWAKNARRIGICREGAGDI*
Ga0070712_10157410523300006175Corn, Switchgrass And Miscanthus RhizosphereSFRDVTRFMLARAIALHSGTAKGETPLFYWAKNARRIGVCREGAPPR*
Ga0066660_1072558413300006800SoilRFMLARAIALRGGTVKGDIPLFYWAKNARRIGVCREAGR*
Ga0126384_1157479013300010046Tropical Forest SoilKQLLGSFADVTRFMLGRAIALRNGTATGQPPLFYWAKNARRIGICREAPG*
Ga0126382_1048862333300010047Tropical Forest SoilGRAIALRNGTATGQPPLFYWAKNARRIGICREAPG*
Ga0126382_1066392013300010047Tropical Forest SoilLARAIALRSGSATGEPPLFYWAKNARRIGVCREARFTG*
Ga0126372_1152914523300010360Tropical Forest SoilMLARAIALRTGTATGETPLFYWAKNARRIGVCREAMRES*
Ga0126378_1012004723300010361Tropical Forest SoilMLARAIALRRGTASGAAPLFYWAKNARRIGLCREAIGES*
Ga0126378_1284076413300010361Tropical Forest SoilRFMRDRAITLREGYASDQAPLFYWAKNARRIGICREAVDTT*
Ga0126381_10003365513300010376Tropical Forest SoilIALRTGTATGETPLFYWAKNARRIGVCREAMRES*
Ga0126381_10062559613300010376Tropical Forest SoilTRFMLGRAIALRNGTATGQPPLFYWAKNARRISICREAPG*
Ga0126381_10292653523300010376Tropical Forest SoilFRDVTRFMLARAIALRRGTASGAAPLFYWAKNARRIGLCREAIGES*
Ga0126381_10490489913300010376Tropical Forest SoilEAFASFRDVTRFMLARAIALRQGTASGETPLFYWAKNARRIGICREAVSTT*
Ga0126383_1013120313300010398Tropical Forest SoilMLARAIALRNGTATGDAPLFYWAKNARRIGICREARVP*
Ga0137391_1059649323300011270Vadose Zone SoilFRDVTRFMLARAMELRTGTASGEAPLFYWAKNARRIGVCREGATSFANEGGG*
Ga0137363_1087139513300012202Vadose Zone SoilFRDVTRFMLARAIALRDGTASSAAPLFYWAKNARRIGVCREAVSAP*
Ga0137362_1051131223300012205Vadose Zone SoilMLARAIALRDGTASGAAPLFYWAKNARRIGVCREAVSAP*
Ga0137377_1041310513300012211Vadose Zone SoilSFRDVTRFMLARAIALRSGTATGGAPLFYWAKNARRIGVCREA*
Ga0137360_1024390813300012361Vadose Zone SoilRLDSFRDVTRFMLARAIALRDGTASGAAPLFYWAKNARRIGVCREAFGTT*
Ga0137390_1082924823300012363Vadose Zone SoilESFRDVTRFMLARAMALRTGTASGSAPLFYWAKNARRIGVCREAIRAG*
Ga0137396_1120540823300012918Vadose Zone SoilMLARALAIRAGTASGEAPLFYWAKNARRIGVCREAFGTT*
Ga0137359_1042889723300012923Vadose Zone SoilMLARAIALRDGTASGAAPLLYWAKNARRIGVCREAVSAF*
Ga0137359_1048258213300012923Vadose Zone SoilLDSFRDVTRFMLARAIALRDGTASGAAPLFYWAKNARRIGVCREAFGTT*
Ga0126369_1082826823300012971Tropical Forest SoilMLARAVALRQGTASGETPLFYWAKNARRIGICRKAFGST*
Ga0182036_1113489913300016270SoilSFRDVIMLAQAIALREGAPSGEAPLFYWAKNARRIGVCRKAVGTI
Ga0182036_1175636613300016270SoilVTRFMLARAIALRQGTASGEAPLFYWAKNARRIGICHEAFSTT
Ga0182041_1146675223300016294SoilRATALRSGTASGAAPLFYCAKNACWIGVCREAADTT
Ga0182033_1019082623300016319SoilFRDVTRFMLARAIALRQGNASGAAPLFYWAKNARRIGVCREAGGSS
Ga0182033_1088138613300016319SoilVIMLAQAIALREGAPSGEAPLFYWAKNARRIGVCRKAVATI
Ga0182035_1004689813300016341SoilVTRFMLAWAIALRKGTASARVPLFYWAKNARRIGVCREAVSST
Ga0182035_1215064013300016341SoilFMLARAMALRSGTASGAAPLFYWAKNARRIGVCREAAGTT
Ga0182032_1072148623300016357SoilDVTRFMLARAIALRGGTARGEAPLFYWAKNARRIGVCREAARAP
Ga0182032_1110859733300016357SoilVTRFMLARAIALRGGSASGEAPLFYWAKNARRIGVCREATGTA
Ga0182032_1133118813300016357SoilFRDVTRFMLSRAISLRRGTASGEAPLFYWAKNARRIGICREAIGAT
Ga0182032_1133577513300016357SoilTRFMLARAMALRSGTASGAAPLFYWAKNARRIGVCREAAGTT
Ga0182034_1015691113300016371SoilGREALASFRDVTRFMLARAIALREGTASGEAPLFYWAKNARRIGVCREAVSST
Ga0182039_1030574123300016422SoilVIMLAQAIALREGAPSGEAPLFYWAKSARRIGVYRKAVGTI
Ga0182039_1149806033300016422SoilLARAIALRVGTASAEAPLFYWAKNARRIGVCREAVSTNERLNAFR
Ga0182038_1183213923300016445SoilRFMLARAIALRQGIASHEAPLFYWAKNARRIGICREAAGVT
Ga0187818_1056054513300017823Freshwater SedimentRGIEQTLLEGFRDVTRFMLARAIALRQGTAAGAAPLFYWAKNARRIGICREATR
Ga0066662_1142630113300018468Grasslands SoilMLARAIALRDGTASGPAPLFYWAKNARRIGVCREAFGTDKI
Ga0210401_1151890113300020583SoilFMLARAIALHGGAAKGETPLFYWAKNARRIGICRESGRDR
Ga0210404_1039375423300021088SoilTRFMLARAIALHRGAAKDETPLFYWAKNARRIGICRESGRDR
Ga0210406_1098151323300021168SoilGQHLLESFRDVTRFMLARAIALRDGTAEGETPLFYWAKNARRIGVCREGAPPR
Ga0210408_1046447723300021178SoilMLARAIALRDGTASGQAPLFYWAKNARRIGVCREAVSAP
Ga0210393_1163296123300021401SoilTRFMLAGAIALRQGSASGEAPLFYWAKNARRIGIRREAFATT
Ga0210397_1089365023300021403SoilRDVTRFMLARAIALREGAAAGAAPLFYWAKNARRIGVCRENAR
Ga0210389_1089360823300021404SoilSFRDVTRFMVARAIALHGGAAKGETPLFYWAKNARRIGICRESGRDR
Ga0210387_1068932413300021405SoilARAIALRQGSASGEAPLFYWAKNARRIGICREAFGTP
Ga0210394_1150631313300021420SoilFMLARAIALHGGAAKDETPLFYWAKNARRIGICRESGRDR
Ga0126371_1129784313300021560Tropical Forest SoilMLARALALRAGTASGLAPLFYWAKNARRVGICREAETPV
Ga0126371_1186758933300021560Tropical Forest SoilVGHEAFASFRDVTRFMLARAIALRQGTASGETPLFYWAKNARRIGICREAVGMT
Ga0242663_100480913300022523SoilRFMLARAIALREGAAAGAAPLFYWAKNARRIGVCRENAR
Ga0242669_105653023300022528SoilREMLDGFRDVTRFMLARAIALREGAAAGAAPLFYWAKNARRIGVCRENAR
Ga0207664_1067873813300025929Agricultural SoilLARAIALRDGAATGEVPLFYWAKNARRIGICREAGDVC
Ga0209447_1019137813300027701Bog Forest SoilTRFMLARAIALHCGTAKGDTPLFYWAKNARRIGVCHESVRDGYA
Ga0209655_1022644723300027767Bog Forest SoilAIALHSGNAKGETPLFYWAKNARRIGVCHESVRDGYA
Ga0209810_103001343300027773Surface SoilDVTRFMLTRAVALYRGIAEGAPPLFYWAKNARRIGICREAADLP
Ga0209693_1019975313300027855SoilRFMLARAIALHGGTAKGEAPLFYWAKNARRIGICREGAGDI
Ga0209275_1009751513300027884SoilHTLESFRDVTRFMLARAIALHGGTAKGEAPLFYWAKNARRIGICREGAGDIQAD
Ga0209488_1068591423300027903Vadose Zone SoilDVTQFMLARAIALHGGAATGEAPLFYWAKNARRIGVCREAVSTR
Ga0308309_1013108233300028906SoilAIALHSGTAKGEAPLFYWAKNARRIGICREGAGDIQAD
Ga0222749_1030549523300029636SoilRALALRQGTASGEAPLFYWAKNARRIGICREAVSTT
Ga0222748_100405923300029701SoilFRDVTRFMLARAIALREGAAAGAAPLFYWAKNARRIGVCRENAR
Ga0210274_102150223300030531SoilDVTRFMLARAVALRSGIAAGEPPLFYWGKNARRIGICREAAGMR
Ga0265460_1068083123300030740SoilRFMLARAVALRSGIATGDPPLFYWGKNARRIGICREAAGMR
Ga0075399_1143710413300030967SoilEAFASFRDVTRFMLARAIALRQGAANGEAPLFYWAKNARRIGICREAFSPT
Ga0170824_12390709223300031231Forest SoilGHEAFASFRDVTRFMLARAIALRQGSASGEAPLFYWAKNARRIGICREAVGMT
Ga0170824_12758809923300031231Forest SoilFESFRDVTRFMLARAIALRQGTASDETPLFYWAKNARRIGICREAFGTT
Ga0170820_1423039723300031446Forest SoilFRDVTRFMLARAIALRQGTASDETPLFYWAKNARRIGICREAVSTT
Ga0170819_1187728523300031469Forest SoilFESFRDVTRFMLARAIALRQGTASGEAPLFYWAKNARRIGICREAFGTT
Ga0318516_1003188813300031543SoilREAPASFRDVIMLAQAIALREGAPSGEAPLFYWAKNARRIGVCRKAVGTI
Ga0318541_1017345923300031545SoilHEAFASFRDVTRFMLARAIALRQGTASGEAPLFYWAKNARRIGICHEAFSTT
Ga0318571_1046978023300031549SoilTRFMLARAIALHGGTAKGETPLFYWAKNARRIGVCREAVSTP
Ga0318528_1064479813300031561SoilFASFRDVTRFMLARAMALRSGTASGAAPLFYWAKNAPRIGVCREAAGTT
Ga0318573_1007037313300031564SoilVTRFMLARAIALHGGTAKGETPLFYWAKNARRIGVCREAVSTNERLNAFR
Ga0318555_1044840013300031640SoilVGHRAFASFRDVTRFMLARAMALRSGTASGAAPLFYWAKNARRIGVCREAAGMT
Ga0318542_1013929723300031668SoilASFRDVTRFMLARAIALREGTASGEAPLFYWAKNARRIGVCREAVSST
Ga0318561_1073986213300031679SoilTRFMLSRAIALRRGTASGEAPLFYWAKNARRIGICREAIGAT
Ga0318572_1074885613300031681SoilHEAFASLRDVTRFMLARAIALRQGSASGEAPLFYWAKNARRIGICREAFGTP
Ga0310686_10549380613300031708SoilGDLEDGLRDVTRFMLARAVALRSGIATGDPPLFYWGKNARRIGICREAAGMR
Ga0310686_11518196113300031708SoilMRARAVAMREGTAAGAPPLFYWGKNARRIGICREGVR
Ga0318493_1016956813300031723SoilFMLARAIALRSGTASAAAPLFYWAKNARRIGVCREAARPA
Ga0318493_1018501723300031723SoilMLARAIALRQGNASGAAPLFYWAKNARRIGVCREAGGSS
Ga0318500_1008894213300031724SoilEAFASLRDVTRFMLARAIALRQGSASGEAPLFYWAKNARRIGICREAFGTP
Ga0306918_1099193013300031744SoilVTRFMLARAIALRSGTATGEAPLFYWAKNARRIGICREAHLGRGVT
Ga0318502_1018805423300031747SoilVIMLAQAIALREGAPSGEAPLFYWAKNARRIGVCRKAVGTI
Ga0318537_1015977533300031763SoilFMLARAIALRQGSASGEAPLFYWAKNARRIGICREAFGTP
Ga0318537_1026866323300031763SoilMLARAIALRGGTASGEAPLFYWAKNARRIGVCREALGAL
Ga0318535_1012840723300031764SoilFRDVTRFMLARAIALREGTASGKIPLFYWAKNARRIGVCREAVSST
Ga0318546_1085965013300031771SoilFMLARAIALRQGTASGEAPLFYWAKNARRIGICHEAFSTT
Ga0318546_1110461413300031771SoilTRFMLARAIALRQGSASGEAPLFYWAKNARRIGICREAFGTP
Ga0318566_1042188523300031779SoilMLARAIALRQGTASGAAPLFYWAKNARRIGVCREAGGTT
Ga0318508_106986723300031780SoilLGRAIALRNGTATGQPPLFYWAKNARRIGICREASG
Ga0318547_1059699813300031781SoilRFMLARALALRGGTASGPAPLFYWARNARRRGICRESRR
Ga0318548_1042558513300031793SoilAFASFRDVTRFMLARAMALRSGTASGAAPLFYWAKNARRIGVCREAAGTT
Ga0318503_1015480313300031794SoilTSFRDVTRFMLARAIALRGGTASAAAPLFYWAKNARRIGVCREAARPA
Ga0318557_1053271523300031795SoilFRDVTRFMLARAIALHVGTAKGDTPLFYWAKNARRIGVCGEASRTT
Ga0318497_1014523223300031805SoilFILARAIALRQGNASGAAPLFYWAKNARRIGVCREAGGSS
Ga0318497_1045601123300031805SoilMLARAIALREGTASGEAPLFYWAKNARRIGVCREAVGTT
Ga0318497_1066206523300031805SoilAIALREGTASGKIPLFYWAKNARRIGVCREAVSST
Ga0318568_1012425113300031819SoilFMLARAMALRSGTASGAAPLFYWAKNARRIGVCREAAGMT
Ga0318564_1030566913300031831SoilLARAVAMRTGTAAGEPPLFYWGKNARRIGICREAARVP
Ga0318511_1016891813300031845SoilSMNRVTRFMLARAIALREGTASGEAPLFYWAKNARRIGVCREAVSST
Ga0306925_1086691413300031890SoilLSRAIALRRGTASGEAPLFYWAKNARRIGICREAIGAT
Ga0306925_1115858923300031890SoilMLARAIALREGTASGEIPLFYRAKNARRIGVCRKAVGTI
Ga0318536_1063225623300031893SoilFASFRDVTRFMLARAMALRSGTASGAAPLFYWAKNARRIGVCREAAGMT
Ga0318520_1036030713300031897SoilLARAVAMRSGTAAGEPPLFYWGKNARRIGICREAARVP
Ga0306923_1032757313300031910SoilQAFASFRDVTRFMLARAMALRQGTARGAAPLFYWAKNARRIGICREAGGSS
Ga0306921_1014011543300031912SoilTRFMLSRAISLRRGTASGEAPLFYWAKNARRIGICREAIGAT
Ga0306921_1065956013300031912SoilVTRFMLARAMALRSGTASGAAPLFYWAKNARRIGVCREAAGMT
Ga0306921_1118452223300031912SoilRAIALRQGTASGAAPLFYWAKNARRIGVCREAGGTT
Ga0306921_1135768213300031912SoilGREVFASFRDVTRFMLARAIALRQGTASGQAPLFYWAKNARRIGVCREAERLP
Ga0306921_1251888123300031912SoilIMLAQAIALREGAPSGEAPLFYRAKNARRVGVCRKAVATI
Ga0310912_1010854933300031941SoilMLSRAMALRSGIASGAAPLFYWAKNACRIEVCREAADTT
Ga0310913_1114765513300031945SoilTRFMLARAVAMRSGTAAGEPPLFYWGKNARRIGICREAARVP
Ga0310910_1007288013300031946SoilMFRDVTRFMLARAIVLRGGNASGEAPLFYWAKNARRIGVCREAGRST
Ga0310910_1029767033300031946SoilGHQAFASFRDVTRFMLARAIALRGGSASGEAPLFYWAKNARRIGVCREATGTA
Ga0310909_1031533123300031947SoilFRDVIMLAQAIALREGAPSGEAPLFYWAKNARRIGVCRKAVGTI
Ga0310909_1041304823300031947SoilSFRDVTRFMLARALALRAGTASDVAPLFYWAKNARRVGVCREAETPG
Ga0306926_1172383123300031954SoilARAMALRSGTASGAAPLFYWAKNAPRIGVCREAAGTT
Ga0306926_1210418513300031954SoilLEDGLRDVTRFMLARAVAMRSGTAAGEPPLFYWGKNARRIGICREAARVP
Ga0318531_1016395213300031981SoilASFRDVTRFMLSRAIALRRGTASGEAPLFYWAKNARRIGICREAIGAT
Ga0306922_1015635613300032001SoilVGHEAFASFRDVTRSVVARAISVCQGTASGEAPLFYWAKNARRIGICRETTRTT
Ga0306922_1196214913300032001SoilRAMALRSGTASGAAPLFYWAKNAPRIGVCREAAGTT
Ga0318507_1024711713300032025SoilTRFMLARAIALRGGSASGEAPLFYWAKNARRIGVCREATGTA
Ga0318549_1013687513300032041SoilLASFRDVTRFMLARAIALREGTASGEAPLFYWAKNARRIGVCREAVSST
Ga0318549_1049823623300032041SoilRFMLSRAIALRRGTASGEAPLFYWAKNARRIGICREAIGAT
Ga0318545_1017232723300032042SoilTRFMLARAIALHVGTAKGDTPLFYWAKNARRIGVCGEASRTT
Ga0318545_1028362713300032042SoilPLMLSRAIALRQGTASGETPLFYWAKNARRISICRETASSA
Ga0318510_1012734033300032064SoilIGREAHASFRDVTRFMLARAIALRGGTASAAAPLFYWAKNARRIGVCREAARPA
Ga0318513_1022264313300032065SoilFMLARAIALREGTASGEAPLFYWAKNARRIGVCREAVGTT
Ga0318514_1068787913300032066SoilESFRDVTRFMLARAIALHNGTAKGDTPLFYWAKNARRLGVCREGGRTT
Ga0318553_1076654013300032068SoilLESFRDVTRFMLARAIALHNGTATGSAPLFYWAKNARRIGVCREAVREPGGPG
Ga0306924_1021966533300032076SoilRDVTRFMLARAMALRSGTASGAAPLFYWAKNARRIGVCREAAGTT
Ga0318577_1054935113300032091SoilASFRDVTRFMLARAMALRSGTASGAAPLFYWAKNAPRIGVCREAAGTT
Ga0318540_1019952313300032094SoilFRDVTRFMLARAIALYGGSARGDAPLFYWAKNARRIGVCGEASRTT
Ga0311301_1281666323300032160Peatlands SoilGTGDLEDGLRDVTRFMLARAVALRSGIAAGEPPLFYWGKNARRIGVCREAAGGP
Ga0307471_10233561623300032180Hardwood Forest SoilMLDRAIALREGMASGEAPLFYWAKNARRVGVCREAVGTT
Ga0307471_10249083423300032180Hardwood Forest SoilTQFMLARAIALREGTASGDAPLFYWAKNARRIGICREAFSPT
Ga0306920_10086862813300032261SoilASVRDVTRFMLARAMALRSGTASGAAPLFYWAKNARRIGVCREAAGTT
Ga0306920_10232691913300032261SoilARAMALRSGTASGAAPLFYWAKNARRIGVCREAAGMT
Ga0348332_1174138613300032515Plant LitterGDLEDGLRDVTRFMLARAVAMREGTAAGAPPLFYWGKNARRIGICREGVR
Ga0335076_1102961823300032955SoilMLARAIALREGMADGEAPLFYWAKNARRIGICREAWR
Ga0310914_1054160723300033289SoilLESFRDVTRFMLARAIALHGGTAKGETPLFYWAKNARRIGVCREAVSTP
Ga0310914_1095865223300033289SoilGKQLLGSFADVTRFMLGRAIALRNGSATGQPPLFYWAKNARRIGICREAPG
Ga0310914_1158486513300033289SoilDVTRFMLARAMALRSGTASGAAPLFYWAKNARRIGVCREAAGTT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.