Metagenome / Metatranscriptome Family F043269

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F043269
Family Type	Metagenome / Metatranscriptome
Number of Sequences	156
Average Sequence Length	50 residues
Representative Sequence	MSLKPGAILLLVAVVLFLLAAFDVALGTLDLVTLGLAAFAGSFLLEGWKR
Number of Associated Samples	114
Number of Associated Scaffolds	156

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.49 %
% of genes near scaffold ends (potentially truncated)	21.15 %
% of genes from short scaffolds (< 2000 bps)	83.97 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (57.051 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.436 % of family members)
Environment Ontology (ENVO)	Unclassified (30.769 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.538 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 44.87% β-sheet: 2.56% Coil/Unstructured: 52.56%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.24.16.3: HEPN domain	d1ufba_	1ufb	0.79528
a.24.16.0: automated matches	d1wola_	1wol	0.78622
a.118.7.1: 14-3-3 protein	d3efza1	3efz	0.76723
a.25.1.7: MiaE-like	d6zmbb_	6zmb	0.76415
a.25.3.0: automated matches	d2vs0a_	2vs0	0.76316

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 156 Family Scaffolds
PF00152	tRNA-synt_2	19.23
PF06339	Ectoine_synth	13.46
PF04977	DivIC	8.33
PF01163	RIO1	6.41
PF08327	AHSA1	3.21
PF00085	Thioredoxin	2.56
PF01593	Amino_oxidase	1.92
PF02938	GAD	1.28
PF08818	DUF1801	1.28
PF00271	Helicase_C	1.28
PF00266	Aminotran_5	1.28
PF08032	SpoU_sub_bind	0.64
PF04248	NTP_transf_9	0.64
PF13458	Peripla_BP_6	0.64
PF03816	LytR_cpsA_psr	0.64
PF01145	Band_7	0.64
PF00293	NUDIX	0.64
PF04075	F420H2_quin_red	0.64
PF13602	ADH_zinc_N_2	0.64
PF02910	Succ_DH_flav_C	0.64
PF07992	Pyr_redox_2	0.64
PF04134	DCC1-like	0.64
PF02142	MGS	0.64
PF13393	tRNA-synt_His	0.64
PF01867	Cas_Cas1	0.64
PF00675	Peptidase_M16	0.64
PF00037	Fer4	0.64
PF05448	AXE1	0.64
PF12840	HTH_20	0.64
PF06197	DUF998	0.64
PF02325	YGGT	0.64
PF08734	GYD	0.64
PF11999	Ice_binding	0.64
PF04892	VanZ	0.64
PF00702	Hydrolase	0.64
PF00717	Peptidase_S24	0.64

COG ID	Name	Functional Category	% Frequency in 156 Family Scaffolds
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	20.51
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	19.23
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	19.23
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	19.23
COG2919	Cell division protein FtsB	Cell cycle control, cell division, chromosome partitioning [D]	8.33
COG4839	Cell division protein FtsL	Cell cycle control, cell division, chromosome partitioning [D]	8.33
COG2511	Archaeal Glu-tRNAGln amidotransferase subunit E, contains GAD domain	Translation, ribosomal structure and biogenesis [J]	1.28
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	1.28
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	1.28
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	1.28
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.64
COG1518	CRISPR-Cas system-associated integrase Cas1	Defense mechanisms [V]	0.64
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	0.64
COG3011	Predicted thiol-disulfide oxidoreductase YuxK, DCC family	General function prediction only [R]	0.64
COG3371	Uncharacterized membrane protein	Function unknown [S]	0.64
COG3458	Cephalosporin-C deacetylase or related acetyl esterase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.64
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.64
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.64
COG0762	Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family	Posttranslational modification, protein turnover, chaperones [O]	0.64
COG1316	Anionic cell wall polymer biosynthesis enzyme TagV/TagU, LytR-Cps2A-Psr (LCP) family (peptidoglycan teichoic acid transferase)	Cell wall/membrane/envelope biogenesis [M]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.05 %
Unclassified	root	N/A	42.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.05 %
Unclassified	root	N/A	42.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.05 %
Unclassified	root	N/A	42.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.95 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	34.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.28 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.95 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	23.08 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4.49 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.28 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.95 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	17.95 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.64 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.64 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	17.95 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.64 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.64 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	17.95 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.64 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.64 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	17.95 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.64 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.64 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.95 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	17.95 %
Frankia saprophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia saprophytica	0.64 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.64 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.64 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090008\|P3_DRAFT_NODE_508708_len_1393_cov_9_233310	Not Available	1443	Open in IMG/M
2124908032\|Perma_A_C_ConsensusfromContig71918	Not Available	904	Open in IMG/M
2162886013\|SwBSRL2_contig_10805215	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2220004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1097	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2375055	Not Available	1614	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14248457	Not Available	1062	Open in IMG/M
3300000887\|AL16A1W_10268634	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300001534\|A15PFW1_10054222	Not Available	1004	Open in IMG/M
3300001536\|A1565W1_10465706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	605	Open in IMG/M
3300003315\|P22013IDBA_10001811	All Organisms → cellular organisms → Bacteria	14299	Open in IMG/M
3300003349\|JGI26129J50193_1016184	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300003371\|JGI26145J50221_1008071	Not Available	901	Open in IMG/M
3300004114\|Ga0062593_100089911	All Organisms → cellular organisms → Bacteria	2119	Open in IMG/M
3300004156\|Ga0062589_100224101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1383	Open in IMG/M
3300004156\|Ga0062589_100262132	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300004479\|Ga0062595_100400682	All Organisms → cellular organisms → Bacteria	983	Open in IMG/M
3300005093\|Ga0062594_100738411	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300005093\|Ga0062594_102160336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300005093\|Ga0062594_103218029	Not Available	512	Open in IMG/M
3300005093\|Ga0062594_103344082	Not Available	504	Open in IMG/M
3300005289\|Ga0065704_10836131	Not Available	513	Open in IMG/M
3300005341\|Ga0070691_10750415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia saprophytica	590	Open in IMG/M
3300005440\|Ga0070705_100272770	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300005440\|Ga0070705_100443321	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300005445\|Ga0070708_100001635	All Organisms → cellular organisms → Bacteria → Terrabacteria group	17180	Open in IMG/M
3300005445\|Ga0070708_100532912	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300005468\|Ga0070707_102120968	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300005468\|Ga0070707_102283441	Not Available	508	Open in IMG/M
3300005471\|Ga0070698_100074003	All Organisms → cellular organisms → Bacteria	3412	Open in IMG/M
3300005471\|Ga0070698_100139928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2372	Open in IMG/M
3300005518\|Ga0070699_101039588	Not Available	751	Open in IMG/M
3300005549\|Ga0070704_101595303	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005556\|Ga0066707_10367661	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300005577\|Ga0068857_100957299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	823	Open in IMG/M
3300005842\|Ga0068858_102104215	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300006852\|Ga0075433_10654244	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300006871\|Ga0075434_100122586	All Organisms → cellular organisms → Bacteria	2615	Open in IMG/M
3300006969\|Ga0075419_10964273	Not Available	619	Open in IMG/M
3300007820\|Ga0104324_108682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1158	Open in IMG/M
3300009551\|Ga0105238_11214303	Not Available	779	Open in IMG/M
3300009811\|Ga0105084_1033878	Not Available	878	Open in IMG/M
3300009815\|Ga0105070_1004268	All Organisms → cellular organisms → Bacteria	2166	Open in IMG/M
3300009816\|Ga0105076_1119670	All Organisms → cellular organisms → Bacteria → Terrabacteria group	523	Open in IMG/M
3300009817\|Ga0105062_1043829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	808	Open in IMG/M
3300009836\|Ga0105068_1046167	All Organisms → cellular organisms → Bacteria → Terrabacteria group	782	Open in IMG/M
3300009837\|Ga0105058_1004677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2486	Open in IMG/M
3300010399\|Ga0134127_11448284	Not Available	759	Open in IMG/M
3300011003\|Ga0138514_100114115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	591	Open in IMG/M
3300011999\|Ga0120148_1017228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1663	Open in IMG/M
3300012001\|Ga0120167_1063943	Not Available	787	Open in IMG/M
3300012001\|Ga0120167_1084225	Not Available	660	Open in IMG/M
3300012008\|Ga0120174_1070415	Not Available	914	Open in IMG/M
3300012045\|Ga0136623_10069785	Not Available	1534	Open in IMG/M
3300012092\|Ga0136621_1414040	Not Available	517	Open in IMG/M
3300012204\|Ga0137374_10236241	Not Available	1544	Open in IMG/M
3300012207\|Ga0137381_10342096	All Organisms → cellular organisms → Bacteria	1304	Open in IMG/M
3300013501\|Ga0120154_1086401	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300014054\|Ga0120135_1044672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	661	Open in IMG/M
3300014829\|Ga0120104_1108227	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300015209\|Ga0167629_1052389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1361	Open in IMG/M
3300015209\|Ga0167629_1069509	Not Available	1131	Open in IMG/M
3300015372\|Ga0132256_102454965	Not Available	623	Open in IMG/M
3300018027\|Ga0184605_10059618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1638	Open in IMG/M
3300018027\|Ga0184605_10147151	Not Available	1058	Open in IMG/M
3300018028\|Ga0184608_10024671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2216	Open in IMG/M
3300018028\|Ga0184608_10033468	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1949	Open in IMG/M
3300018028\|Ga0184608_10074402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1381	Open in IMG/M
3300018028\|Ga0184608_10456892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	549	Open in IMG/M
3300018052\|Ga0184638_1057256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1422	Open in IMG/M
3300018052\|Ga0184638_1271146	Not Available	579	Open in IMG/M
3300018053\|Ga0184626_10084833	Not Available	1339	Open in IMG/M
3300018053\|Ga0184626_10127669	Not Available	1081	Open in IMG/M
3300018053\|Ga0184626_10192616	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300018054\|Ga0184621_10223280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	674	Open in IMG/M
3300018056\|Ga0184623_10032735	All Organisms → cellular organisms → Bacteria	2345	Open in IMG/M
3300018056\|Ga0184623_10103764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1314	Open in IMG/M
3300018056\|Ga0184623_10193779	Not Available	935	Open in IMG/M
3300018063\|Ga0184637_10058234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2361	Open in IMG/M
3300018071\|Ga0184618_10149029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	955	Open in IMG/M
3300018075\|Ga0184632_10171754	Not Available	956	Open in IMG/M
3300018075\|Ga0184632_10180413	Not Available	931	Open in IMG/M
3300018077\|Ga0184633_10110839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1418	Open in IMG/M
3300018077\|Ga0184633_10162250	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300018077\|Ga0184633_10163998	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1152	Open in IMG/M
3300018077\|Ga0184633_10303317	All Organisms → cellular organisms → Bacteria → Terrabacteria group	814	Open in IMG/M
3300018078\|Ga0184612_10041290	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2396	Open in IMG/M
3300018078\|Ga0184612_10310889	Not Available	806	Open in IMG/M
3300018078\|Ga0184612_10388629	Not Available	702	Open in IMG/M
3300018082\|Ga0184639_10014738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3827	Open in IMG/M
3300019879\|Ga0193723_1140112	Not Available	657	Open in IMG/M
3300019888\|Ga0193751_1001309	All Organisms → cellular organisms → Bacteria	16193	Open in IMG/M
3300020003\|Ga0193739_1021408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1685	Open in IMG/M
3300020059\|Ga0193745_1027444	Not Available	1249	Open in IMG/M
3300021073\|Ga0210378_10172757	Not Available	830	Open in IMG/M
3300021073\|Ga0210378_10240121	Not Available	687	Open in IMG/M
3300021078\|Ga0210381_10293464	Not Available	586	Open in IMG/M
3300021080\|Ga0210382_10037125	Not Available	1862	Open in IMG/M
3300021080\|Ga0210382_10213140	Not Available	840	Open in IMG/M
3300021080\|Ga0210382_10302798	Not Available	703	Open in IMG/M
3300022534\|Ga0224452_1063896	Not Available	1104	Open in IMG/M
3300022694\|Ga0222623_10010056	Not Available	3431	Open in IMG/M
3300025324\|Ga0209640_10109164	All Organisms → cellular organisms → Bacteria	2382	Open in IMG/M
3300025921\|Ga0207652_11582472	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300025922\|Ga0207646_10363343	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300025922\|Ga0207646_11016309	Not Available	732	Open in IMG/M
3300025922\|Ga0207646_11405226	Not Available	607	Open in IMG/M
3300025933\|Ga0207706_10649594	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300026532\|Ga0209160_1267069	All Organisms → cellular organisms → Bacteria → Terrabacteria group	581	Open in IMG/M
3300027395\|Ga0209996_1009097	Not Available	1308	Open in IMG/M
3300027490\|Ga0209899_1000656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7212	Open in IMG/M
3300027543\|Ga0209999_1097722	Not Available	571	Open in IMG/M
3300027657\|Ga0256865_1019564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1695	Open in IMG/M
3300027665\|Ga0209983_1025653	Not Available	1244	Open in IMG/M
3300027674\|Ga0209118_1081744	Not Available	924	Open in IMG/M
3300027695\|Ga0209966_1026955	Not Available	1147	Open in IMG/M
3300027961\|Ga0209853_1004220	All Organisms → cellular organisms → Bacteria	4430	Open in IMG/M
3300027964\|Ga0256864_1019730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1739	Open in IMG/M
3300028006\|Ga0247717_1038968	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300028705\|Ga0307276_10161881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	574	Open in IMG/M
3300028711\|Ga0307293_10124472	Not Available	819	Open in IMG/M
3300028713\|Ga0307303_10168212	Not Available	533	Open in IMG/M
3300028716\|Ga0307311_10065856	Not Available	980	Open in IMG/M
3300028719\|Ga0307301_10082928	Not Available	1007	Open in IMG/M
3300028784\|Ga0307282_10043231	Not Available	1991	Open in IMG/M
3300028787\|Ga0307323_10040873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1626	Open in IMG/M
3300028793\|Ga0307299_10193536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	765	Open in IMG/M
3300028796\|Ga0307287_10100047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1094	Open in IMG/M
3300028796\|Ga0307287_10162862	Not Available	848	Open in IMG/M
3300028799\|Ga0307284_10034663	Not Available	1708	Open in IMG/M
3300028814\|Ga0307302_10132740	Not Available	1201	Open in IMG/M
3300028814\|Ga0307302_10272156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	831	Open in IMG/M
3300028814\|Ga0307302_10468129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	625	Open in IMG/M
3300028828\|Ga0307312_10823386	Not Available	615	Open in IMG/M
3300028884\|Ga0307308_10101379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1371	Open in IMG/M
3300028885\|Ga0307304_10085013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1239	Open in IMG/M
3300030606\|Ga0299906_10008038	All Organisms → cellular organisms → Bacteria	8518	Open in IMG/M
3300030606\|Ga0299906_10012050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6953	Open in IMG/M
3300030606\|Ga0299906_10093208	Not Available	2396	Open in IMG/M
3300030606\|Ga0299906_11359942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	506	Open in IMG/M
3300030620\|Ga0302046_10132389	Not Available	2042	Open in IMG/M
3300031229\|Ga0299913_10473025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1240	Open in IMG/M
3300031421\|Ga0308194_10274765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	574	Open in IMG/M
3300031716\|Ga0310813_10074805	Not Available	2568	Open in IMG/M
3300031965\|Ga0326597_10158186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2697	Open in IMG/M
3300031965\|Ga0326597_10522367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1288	Open in IMG/M
3300031965\|Ga0326597_10841359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	946	Open in IMG/M
3300033407\|Ga0214472_10230439	Not Available	1782	Open in IMG/M
3300033417\|Ga0214471_10079824	Not Available	2683	Open in IMG/M
3300033417\|Ga0214471_10171647	Not Available	1785	Open in IMG/M
3300033417\|Ga0214471_10349411	Not Available	1197	Open in IMG/M
3300034114\|Ga0364938_054868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	702	Open in IMG/M
3300034114\|Ga0364938_102688	All Organisms → cellular organisms → Bacteria → Terrabacteria group	555	Open in IMG/M
3300034177\|Ga0364932_0112609	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1034	Open in IMG/M
3300034178\|Ga0364934_0372380	Not Available	541	Open in IMG/M
3300034377\|Ga0334931_012331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1689	Open in IMG/M
3300034773\|Ga0364936_064602	Not Available	683	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.38%
Host-Associated	Host-Associated	9.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Aquatic	Environmental → Aquatic	23.72%
Plants	Host-Associated → Plants	9.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.82%
Sediment	Environmental → Aquatic → Sediment	18.59%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.77%
Freshwater	Environmental → Aquatic → Freshwater	5.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.85%
Floodplain	Environmental → Terrestrial → Floodplain	3.21%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	46.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	18.59%
Loam	Environmental → Terrestrial → Soil → Loam	10.90%
Sand	Environmental → Terrestrial → Soil → Sand	5.13%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.13%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	3.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.56%
Ice	Environmental → Aquatic → Freshwater → Ice	1.28%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.28%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.28%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	18.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.62%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	7.69%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.13%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.13%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.21%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	3.21%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	3.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.28%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.28%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.64%
Mine Drainage	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage	0.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.64%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.64%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.44%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	17.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.97%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	6.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.13%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	5.13%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.85%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	3.21%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	3.21%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.92%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.28%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.28%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.28%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.28%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.64%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.64%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.64%
Ore Pile And Mine Drainage Contaminated Soil	Environmental → Terrestrial → Soil → Unclassified → Mine Drainage → Ore Pile And Mine Drainage Contaminated Soil	0.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.64%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.64%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.64%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.64%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.64%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000887	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-65cm-16A)- 1 week illumina	Environmental	Open in IMG/M
3300001534	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-PF-7A)- 1 week illumina	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300003315	Ore pile and mine drainage contaminated soil microbial communities from Mina do Sossego, Brazil - P2 sample	Environmental	Open in IMG/M
3300003349	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM	Host-Associated	Open in IMG/M
3300003371	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007820	Permafrost core soil microbial communities from Svalbard, Norway - sample 2-12-2 Soapdenovo	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300009837	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011999	Permafrost microbial communities from Nunavut, Canada - A28_65cm_6M	Environmental	Open in IMG/M
3300012001	Permafrost microbial communities from Nunavut, Canada - A24_80cm_12M	Environmental	Open in IMG/M
3300012008	Permafrost microbial communities from Nunavut, Canada - A39_80cm_12M	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012092	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300014054	Permafrost microbial communities from Nunavut, Canada - A34_5cm_12M	Environmental	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015209	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G3B, Proglacial river margin, by glacier terminus)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027395	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027657	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125 HiSeq	Environmental	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027964	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111 HiSeq	Environmental	Open in IMG/M
3300028006	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 2-4-E_N	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300034114	Sediment microbial communities from East River floodplain, Colorado, United States - 9_s17	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034773	Sediment microbial communities from East River floodplain, Colorado, United States - 4_s17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P3_DRAFT_01642960	2088090008	Soil	MRFTPSAILLLVAVVLFLLAAFAVKLGTFDLVTLGFAAFAASFLVERWTK
Perma_A_C_04008650	2124908032	Soil	VSLKPSAVLLLVAVVLFLLTAFAVRLGTLDLVTLGFAAFAASFLVEGWKR
SwBSRL2_0505.00007170	2162886013	Switchgrass Rhizosphere	MSRSPASILLLIAVVLFLLAAFKVDLGTLDLVTLGLAAFAGSFLLGAWKR
ICChiseqgaiiDRAFT_22200042	3300000033	Soil	MSTSPAVLLLLVAVVLFLLSAFDVALGSLNLVTLGLAAFAGSFLISGWKR*
ICChiseqgaiiDRAFT_23750551	3300000033	Soil	MSMKPGAILLLIAVVLFLLAAFDVSLGSLNLVTLGFAAFAGSFLVDSWRR*
ICChiseqgaiiFebDRAFT_142484573	3300000363	Soil	MSTSPAVLLLLVAVVLFLLAAFDVALGSLNLVTLGLAAFAGSFLISGWKR*
AL16A1W_102686342	3300000887	Permafrost	MSWSLSAILLLVAVVLFLLAAFEIDVGKLNLVNFGLAAFAGSFLVAGWKR*
A15PFW1_100542221	3300001534	Permafrost	MRFTPSAILLLVAVVLFLLAAFAIKLGTFDLVTLGLAAFAASFLAEHWTK*
A1565W1_104657062	3300001536	Permafrost	MMRGGTNEGHMRFTPSAILLLVAVVLFLLAAFAIKVGTFDLVTLGLAAFAASFLAERWTK
P22013IDBA_100018115	3300003315	Ore Pile And Mine Drainage Contaminated Soil	MKLTPGVILLIVAVVLFLLAAFGVALGGLDLVTLGLAAFAGAFLVDKLT*
JGI26129J50193_10161842	3300003349	Arabidopsis Thaliana Rhizosphere	MSTSPAVILLLVAVVLFLLAAFDVALGSLNLVTLGLAAFAGSFLISGWKR*
JGI26145J50221_10080712	3300003371	Arabidopsis Thaliana Rhizosphere	MSTSPAVILLLVAVVLFLLAAFDVALGSLXLVTLGLAAFAGSFLISGWKR*
Ga0062593_1000899112	3300004114	Soil	MKPSAILLLVAVVLFLLAAFSVNLGSLDLVTLGLAAFAGSFLVEGWRR*
Ga0062589_1002241013	3300004156	Soil	MSTSPAAILLLVAVVLFLLAAFDVALGSLHLETLGLAAFAGSFLIAGWKR*
Ga0062589_1002621321	3300004156	Soil	MKPSAILLLVAVVLFLLAAFSVNLGSLDLVTLGLAAFAGSFLVEGWRR
Ga0062595_1004006822	3300004479	Soil	MSRSPGSILLLVAVVLFLLSAFKVDLGGLNLVTLGFAAFAGSFLVGSWKR*
Ga0062594_1007384112	3300005093	Soil	MERRFKVSMKPGALLLLVAVVLFLLSAFSVNLGSLDLVTLGLAAFAGSFLLEGWKR*
Ga0062594_1021603362	3300005093	Soil	MSTSPAAILLLVAVVLFLLAAFDVALGSLNLVTLGLAAFAGSFLLAGWKR*
Ga0062594_1032180292	3300005093	Soil	MSTSPAAILLLVAVVLFLLAAFDVALGSLNLVTLGLAAFAGSFLIAGWKR*
Ga0062594_1033440821	3300005093	Soil	MSLKPSSILLLIAVVLFLLAAFSVNLGSLDLVTLGFAAFAGSFLIEGYKR*
Ga0065704_108361311	3300005289	Switchgrass Rhizosphere	MSRSPASILLLIAVVLFLLAAFKVDLGTLDLVTLGLAAFAGSFLLGAWKR*
Ga0070691_107504151	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	FKVSMKPGALLLLVAVVLFLLSAFSVNLGSLDLVTLGLAAFAGSFLLEGWKR*
Ga0070705_1002727702	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSLKPSSILLLIAVVLFLLAAFSVDLGTLNLVTLGFAAFAGSFLIEGYKR*
Ga0070705_1004433212	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKPGALLLLVAVVLFLLSAFSVNLGSLDLVTLGLAAFAGSFLLEGWKR*
Ga0070708_10000163515	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRFTPSTILLLIAVVLFVLAAFAVKLGTFDLVTLGLAAFAASFLVEHWTR*
Ga0070708_1005329121	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSRSPGSILLLVAVVLFLLAAFKVDLGNLSLVTLGFAAFAGSFLLAGWK
Ga0070707_1021209681	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LLLIAVVLFLLAAFKVDLGTLDLVTLGLAAFAGSFLLGSWKR*
Ga0070707_1022834412	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VRFTPGAILLLAAVVLFLLAAFEVRLGTLDLVTLGLAAFAGSFLLEHWKR*
Ga0070698_1000740032	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSRSPASILLLIAVVLFLLAAFKVNLGSLDLVTLGFAAFAGSFLLGAWKR*
Ga0070698_1001399281	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSRSPASILLLIAVVLFLLAAFKVDLGTLDLVTLGLAAFAGSFLLGSWKR*
Ga0070699_1010395881	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSLKPSSILLLIAVVLFLLAAFSVNLGSLDLVTLGFAAFAGSF
Ga0070704_1015953032	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MSLKPSSILLLIAVVMFLLAAFSVDVGGLNLVTLGFAAFAGSFLIEGYKR*
Ga0066707_103676612	3300005556	Soil	VRFTPSAILLLVAVVLFLLAAFAVRLGTLDLVTLGLAAFAGSFLVEHWKR*
Ga0068857_1009572993	3300005577	Corn Rhizosphere	MSTSPAVILLLVAVVLFLLAAFDVALGSLNLVTLGLAAFAGSFLIAGWKR*
Ga0068858_1021042153	3300005842	Switchgrass Rhizosphere	VVLFLLAAFDVALGSLNLVTLGLAAFAGSFLISGWKR*
Ga0075433_106542443	3300006852	Populus Rhizosphere	VRFTPGAILLLIAVILFLAAAFKVNLGSLDLVTLGLAAFAGSFLLGKAM*
Ga0075434_1001225864	3300006871	Populus Rhizosphere	GAILLLIAVILFLAAAFKVNLGSLDLVTLGLAAFAGSFLLGKAM*
Ga0075419_109642731	3300006969	Populus Rhizosphere	MSMKPGAILLLIAVVLFLLAAFDVSLGSLNLVTLGFAAFAGSFL
Ga0104324_1086821	3300007820	Soil	VSLKPSAILLLAAVVLFLLAAFAVKLGTFDLVTLGLAAFAASFLVEHWKR*
Ga0105238_112143032	3300009551	Corn Rhizosphere	MSTSPAVILLLVAVVLFLLAAFDVALGSLDLVTLGLAAFAGSFLLAGWKR*
Ga0105084_10338783	3300009811	Groundwater Sand	MRITPSAILLLVAVVLFVLAAFAVQVGTFDLVTLGLAAFAASFLIERWKR*
Ga0105070_10042682	3300009815	Groundwater Sand	MAVRFTPGAILLLVAVVLFLLGAFAVQVGTLDLVTLGLAAFAGSFLVESWKR*
Ga0105076_11196702	3300009816	Groundwater Sand	VVLFLLGAFAVQVGTLDLVTLGLAAFAASFLLESWKR*
Ga0105062_10438292	3300009817	Groundwater Sand	VNFKPGAILLLVAVVLFLLGAFAVQLGTLDLVTLGLAAFAASFLVESWKR*
Ga0105068_10461671	3300009836	Groundwater Sand	RREEKKAVRFTPGAILLLVAVVLFLLGAFAVQVGTLDLVTLGLAAFAGSFLVESWKR*
Ga0105058_10046772	3300009837	Groundwater Sand	VNFKPGAILLLVAVVLFLLGAFAVQVGTLDLVTLGLAAFAASFLVESWKR*
Ga0134127_114482842	3300010399	Terrestrial Soil	MERRIKVSMKPGALLLLVAVVLFLLAAFSVNLGSLDLVTLGLAAFAGSFLLEGWKR*
Ga0138514_1001141152	3300011003	Soil	MNASPGSILLVIAVVLFLLAAFNVALGSLDLVTLGLAAFAASFLLGSGGLNLRR*
Ga0120148_10172282	3300011999	Permafrost	MSLTPSAILLLAAVVLFLLAAFAVKLGTFDLVTLGLAAFVASFLFEHLKR*
Ga0120167_10639431	3300012001	Permafrost	PSAILLLVAVVLFLLAAFAIKVGTFDLVTLGLAAFAASFLAERWTK*
Ga0120167_10842252	3300012001	Permafrost	MRFTPSAILLLVAVVLFLLAAFAIKLGTFDLVTLGLAAFAASF
Ga0120174_10704152	3300012008	Permafrost	MRPGAILLIIAVVLFLLAAFKVDLGSLDLVTLGLAAFAGSFLIDGWRR*
Ga0136623_100697851	3300012045	Polar Desert Sand	MRFTPSAILLIVAVILFLLAAFAIQLGTFDLVTLGLAAFAASFLVERWTK*
Ga0136621_14140401	3300012092	Polar Desert Sand	MRFTPSVILLVVAVVFFLLAAFGVGLGGLDLVTLGLAAFAGSFLVDRLT*
Ga0137374_102362412	3300012204	Vadose Zone Soil	MKPGAILLLIAVVLFLLAAFDVSLGTLDLVTLGFAASAGSFLLEGWRR*
Ga0137381_103420963	3300012207	Vadose Zone Soil	VRFTPGAILLLAAVVLFLLAAFEVKLGTLDLVTLGLAAFAGSFLLDHWKR*
Ga0120154_10864011	3300013501	Permafrost	MRFTPSAILLLVAVVLFLLAAFAIKVGTFDLVTLGLAAFAASFLAERWTK*
Ga0120135_10446721	3300014054	Permafrost	EGAVSMKPSAILLLVAVILFLLSAFSVQLGTFDLVTLGLAAFAGSFLIDGWKR*
Ga0120104_11082272	3300014829	Permafrost	MPSRFVFAVGAILLLAAVVLFLLAAFAVKLGTFDLVTLGLAAFAASFLVEHWKR*
Ga0167629_10523894	3300015209	Glacier Forefield Soil	VVSVLLLAAVVLFLLAAFAVKLGTFDLVTLGLAAFAASFLVEHWKR*
Ga0167629_10695092	3300015209	Glacier Forefield Soil	MSLKPSAILLLIAVVLFLLSAFSISLASLNLVTLGLAAFAGSFLVEGWKR*
Ga0132256_1024549652	3300015372	Arabidopsis Rhizosphere	VFRNPSSILLAVAVILFLLAAFDINLGKLNLVTLGFAAFAGSFLLSGWKR*
Ga0184605_100596182	3300018027	Groundwater Sediment	MNLSPSSILLLVAVVLFVLAALKVALGGLDLVTLGLAAFAGSFLLGSGGLNLRR
Ga0184605_101471512	3300018027	Groundwater Sediment	MSLKPSAILLLIAVVLFLLAAFSVSLGSLDLVTLGFAAFAGSFLIEGYKR
Ga0184608_100246712	3300018028	Groundwater Sediment	MSMKPGAILLLVAVVLFLLAAFEVDLGTLNLVTLGLAAFAGSFLLDSWKR
Ga0184608_100334682	3300018028	Groundwater Sediment	VRITPGAILLLVAVVLFLLGAFAVQVGTLDLVTLGLAAFAASFLVESWKR
Ga0184608_100744022	3300018028	Groundwater Sediment	MKPGAILLLIAVVLFLLAAFKVDLGTLDLVTLGLAGFAGSFLLDSWKR
Ga0184608_104568922	3300018028	Groundwater Sediment	MSMKPGAILLLIAVVLFLLAAFKVDLGTLDLVTLGLAAFAGSFLLDTWKR
Ga0184638_10572563	3300018052	Groundwater Sediment	MRITPGAILLLAAVVLFLLGAFAVQVGTLDLVTLGLAAFAASFLVESWKR
Ga0184638_12711462	3300018052	Groundwater Sediment	MSLKPGAILLLVAVVLFLLAAFDVALGTLDLVTLGLAAFAGSFLLEGWKR
Ga0184626_100848332	3300018053	Groundwater Sediment	MKPGAILLLVAVVLFLLAAFDVKLGTLDLVTLGFAAFAGSFLLGAWKG
Ga0184626_101276691	3300018053	Groundwater Sediment	VRITPGAILLLVAVVLFVLGAFAVQVGTLDLVTLGLAAFAASFLLESWKR
Ga0184626_101926162	3300018053	Groundwater Sediment	VRIKPGTILLLVAVVLFLLAAFAVQVGTFDLVTLGLAAFAASFLVEQFKR
Ga0184621_102232801	3300018054	Groundwater Sediment	TPSIEGELMNLSPSSILLLVAVVLFVLAALKVALGGLDLVTLGLAAFAGSFLLGSGGLNLRR
Ga0184623_100327353	3300018056	Groundwater Sediment	MKPGAILLLVAVVLFLLAAFDVALGTLDLAMLGLAAFAGSFLLEGWRR
Ga0184623_101037642	3300018056	Groundwater Sediment	MRFTPGAILLLVAVVLFLLGAFAVQVGTLDLVTLGLAAFAASFLVESWKR
Ga0184623_101937793	3300018056	Groundwater Sediment	MSMKPGAILLLVAVVLFLLAAFDVELGTLDLVTLGFAAFAGSFLLDSWKR
Ga0184637_100582345	3300018063	Groundwater Sediment	VSIKPGAILLLVAVVLFLLGAFAVQVGTFDLVTLGLAAFAASFLVESWKR
Ga0184618_101490292	3300018071	Groundwater Sediment	MNLGSILLIIAVVLFVLDALSIALGNVSLVSLGLAAFAGSFLLGSGGLNLKR
Ga0184632_101717542	3300018075	Groundwater Sediment	AVVLFLLGAFAVQVGTLDLVTLGLAAFAASFLVESWKR
Ga0184632_101804131	3300018075	Groundwater Sediment	MSLKPSAILLLIAVVLFLLAAFSVDLGTLNLVTLGFAAFAGSFLIEGYKR
Ga0184633_101108392	3300018077	Groundwater Sediment	VSLKPGAILLLVAVVLFLLAAFEVKLGTLDLVTLGLAAFAGSFLIEGWKR
Ga0184633_101622503	3300018077	Groundwater Sediment	VSLKPGAILLLIAVVLFLLAAFAVELGTLDLVTLGLAAFAASFLIEGWKR
Ga0184633_101639982	3300018077	Groundwater Sediment	VRFTPRSILLLVAVVLFLLAAFAVQVGTFDLVTLGLAAFAASFLVESWKR
Ga0184633_103033172	3300018077	Groundwater Sediment	MRFRPGAILLLVAVVLFVLAAFAVQVGTLDLVTLGLAAFAASFLVESWKR
Ga0184612_100412904	3300018078	Groundwater Sediment	VRITPGAILLLVAVVLFVLGAFAVQVGTLDLVTLGLAAFAASFLVESWKR
Ga0184612_103108891	3300018078	Groundwater Sediment	RRAMSLKPSAILLLIAVVLFLLAAFSVDLGTLNLVTLGFAAFAGSFLIEGYKR
Ga0184612_103886292	3300018078	Groundwater Sediment	LKPGAILLLVAVVLFLLAAFDVALGTLDLVTLGLAAFAGSFLLEGWKR
Ga0184639_100147384	3300018082	Groundwater Sediment	VRFTPGAILLLVAVVLFLLGAFAVQVGTLDLVTLGLAAFAASFLVESWKR
Ga0193723_11401122	3300019879	Soil	MSLKPSAILLLIAVVLFLLAAFSVNLGSLDLVTLGFAAFAGSFL
Ga0193751_10013098	3300019888	Soil	VRFTPAAILLLVAVVLFLLAAFAVKLGTLDLVNLGLAAFAGSFLLEHWKR
Ga0193739_10214082	3300020003	Soil	VRIKPGTILLLVAVVLFLLAAFAVQVGTFDLVTLGFAAFAASFLVEQFKR
Ga0193745_10274442	3300020059	Soil	MSTSPAVILLLVAVVLFLLAAFDVALGSLHLVDLGLAAFAGSFLIAGYKR
Ga0210378_101727572	3300021073	Groundwater Sediment	MSMKPGAILLLIAVVLFLLAAFEVKLGSLDLVTLGFAAFAGSFLLDSWKR
Ga0210378_102401212	3300021073	Groundwater Sediment	MKPGAILLLVAVVLFLLAAFNVALGDLDLVTLGLAAFAGSFLLDSWKR
Ga0210381_102934642	3300021078	Groundwater Sediment	MNASPGSILLILAVVLFLLAAFKVALGSLDLVTLGLAAFAASFLLGSGSLNLRR
Ga0210382_100371252	3300021080	Groundwater Sediment	MSLKPSAILLLIAVVLFLLAAFSVELGTLDLVTLGLTAFAGSFLIEGYKR
Ga0210382_102131402	3300021080	Groundwater Sediment	MSTSPAVILLLVAVVLFLLAAFDVALGSLDLVTLGLAAFAGSFLIAGYKR
Ga0210382_103027981	3300021080	Groundwater Sediment	MSMKPSAVLLLIAVVLFLLAAFSVKFGTLNLVTLGLAAFAGSFLIDGWKR
Ga0224452_10638963	3300022534	Groundwater Sediment	MSVKPGAILLLVAVVLFLLAAFEVDLGTLNLVTLGLAAFAGSFLLDSWKR
Ga0222623_100100564	3300022694	Groundwater Sediment	VRITPSAILLLVAVVLFVLAAFAVQVGTFDLVTLGLAAFAASFLVESWKR
Ga0209640_101091643	3300025324	Soil	MRISASALLALIAVVLFLLAAFAVQVGSLDLVTLGLAAFAAAFLAERWKR
Ga0207652_115824722	3300025921	Corn Rhizosphere	MKPGALLLLVAVVLFLLSAFSVNLGSLDLVTLGLAAFAGSFLLEGWKR
Ga0207646_103633431	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSLKPSSILLLIAVVLFLLAAFSVNLGSLDLVTLGFAAFAGSFLIEGYKR
Ga0207646_110163091	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	SLSNQPGGSQKRRRAMSRSPGSILLLVAVVLFLLSAFKVDLGGLNLVTLGFAAFAGSFLVGSWKR
Ga0207646_114052262	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSRSPASILLLIAVVLFLLAAFKVNLGSLDLVTLGFAAFAGSFLLGAWKR
Ga0207706_106495942	3300025933	Corn Rhizosphere	MSTSPAVILLLVAVVLFLLAAFDVALGSLNLVTLGLAAFAGSFLISGWKR
Ga0209160_12670691	3300026532	Soil	VRFTPSAILLLVAVVLFLLAAFAVRLGTLDLVTLGLAAFAGSFLVEHWKR
Ga0209996_10090972	3300027395	Arabidopsis Thaliana Rhizosphere	MSTSPAVILLLVAVVLFLLAAFDVALGSLDLVTLGLAAFAGSFLISGWKR
Ga0209899_10006564	3300027490	Groundwater Sand	MAVRFTPGAILLLVAVVLFLLGAFAVQVGTLDLVTLGLAAFAGSFLVESWKR
Ga0209999_10977221	3300027543	Arabidopsis Thaliana Rhizosphere	SPAVILLLVAVVLFLLAAFDVALGSLNLVTLGLAAFAGSFLISGWKR
Ga0256865_10195643	3300027657	Soil	VRFTPRAILLLVAVVLFLLAAFAVQFGTFDLVTLGLAAFAASFLVESWKR
Ga0209983_10256532	3300027665	Arabidopsis Thaliana Rhizosphere	MSTSPAVILLLVAVVLFLLAAFDVALGSLNLVTLGLAAFAGSLDFAL
Ga0209118_10817441	3300027674	Forest Soil	VSLKPSAILLLAAVVLFLLAAFAVKLGTFDLVTLGLAAFAASFLVEHWKR
Ga0209966_10269551	3300027695	Arabidopsis Thaliana Rhizosphere	AVILLLVAVVLFLLAAFDVALGSLNLVTLGLAAFAGSFLISGWKR
Ga0209853_10042206	3300027961	Groundwater Sand	VRFTPGAILLLVAVVLFLLGAFAVQVGTLDLVTLGLAAFAASFLLESWKR
Ga0256864_10197303	3300027964	Soil	MRFRPGAILLLVAVVLFVLAAFAVQVGTFDLVTLGLAAFAASFLVESWKR
Ga0247717_10389681	3300028006	Soil	MGPRSILLIVAVVLFLLAAFNVDLGELELIPLGLAAFAGSFLVGDRAINRR
Ga0307276_101618811	3300028705	Soil	NASPGSILLIIAVVLFLLAAFNVALASLDLVTLGLAAFAASFLLGSGGLNLRR
Ga0307293_101244722	3300028711	Soil	MKPGAILLLIAVVLFLLAAFSVELGSLDLVTLGLAAFAGSFLIEGWRR
Ga0307303_101682122	3300028713	Soil	ESMNASPGSILLIIAVVLFLLAAFNVALGSLDLVTLGLAAFAASFLLGTGSLNLRR
Ga0307311_100658562	3300028716	Soil	MNASPGSILLIIAVVLFLLAAFNVALASLDLVTLGLAAFAASFLLGSGSLNLRR
Ga0307301_100829282	3300028719	Soil	MSTSPAAILLLVAVILFLLAAFDVALGSLNLVTLGLAAFAGSFLIAGY
Ga0307282_100432313	3300028784	Soil	MNLTPSSILLLVAVILFLLAAFDIALGSLDLVTLGLAAFAGSFLVGGVSLRR
Ga0307323_100408732	3300028787	Soil	MSTSPATILLLIAVILFLLAAFKVDLGTLDLVTLGLAAFAGSFLLGSWKR
Ga0307299_101935361	3300028793	Soil	LTPSSILLLVAVILFLLAAFDIALGSLDLVTLGLAAFAGSFLVGGVSLRR
Ga0307287_101000473	3300028796	Soil	MNASPGSILLIIAVVLFLLAAFNVALGSLDLVTLGLAAFAASFLLGSGSLNLRR
Ga0307287_101628622	3300028796	Soil	MKPGAILLLIAVVLFLLAAFDVAIGTLNLATLGLAAFAGSFLLDGWKR
Ga0307284_100346633	3300028799	Soil	MNASPGSILLIIAVVLFLLAAFNVALGSLDLVTLGLAAFAASFLLGTGSLNLRR
Ga0307302_101327401	3300028814	Soil	MNLSPSSILLLAAVILFLLAAFDIALGSLDLVTLGLAAFAASFLVGGVSLRR
Ga0307302_102721563	3300028814	Soil	MSMKPGAILLLIAVVLFLLAAFKVDLGTLDLVTLGLAAFAGSFLLDSWKR
Ga0307302_104681292	3300028814	Soil	MKPGAILLLIAVVLFLLAAFKVDLGTLDLVTLGLAAFAGSFLLDSWKR
Ga0307312_108233862	3300028828	Soil	MSTSPAVILLLVAVVLFLLAAFDVALGSLNLVTLGLAAFAGSFLIAGYKR
Ga0307308_101013792	3300028884	Soil	MSLKPSAILLLIAVVLFLLAAFSVDLGTLDLVTLGFAAFAGSFLIEGYKR
Ga0307304_100850132	3300028885	Soil	MNASPGSILLIIAVVLFLLAAFNVALASLDLVTLGLAAFAASFLLGSGGLNLRR
Ga0299906_100080381	3300030606	Soil	VRFTPRAILLLVAVVLFLLAAFAVQVGTFDLVTLGLAAFAASFLVESWKR
Ga0299906_100120503	3300030606	Soil	VRFTPGAILLLVAVVLFLLAAFAVQVGTFDLVTLGLAAFAASFLVERWKR
Ga0299906_100932083	3300030606	Soil	KEGRAVRFTPKAILLLVAVVLFLLAAFAVQVGTFDLVTLGLAAFAASFLVESWKR
Ga0299906_113599423	3300030606	Soil	RGRNKEETALRFTPRAILLLVAVVLFVLAAFAVQVGTFDLVTLGLAAFAASFLVESWKR
Ga0302046_101323891	3300030620	Soil	LRFTPRAILLLVAVVLFLLAAFAVQVGTLDLVTLGLAAFAASFLVESWKR
Ga0299913_104730251	3300031229	Soil	MKFTPGSILLIVAVVFFLLAAFAVDLGGLDLVTLGLAAFAGAFLVDKLT
Ga0308194_102747651	3300031421	Soil	KMERRSAMSLKPSSILLLIAVVLFLLAAFSVNLGSLDLVTLGFAAFAGSFLIEGYKR
Ga0310813_100748053	3300031716	Soil	MSTSPAAILLLVAVVLFLLAAFDVALGSLDLVTLGLAAFAGSFLIAGWKR
Ga0326597_101581862	3300031965	Soil	VRFKPGAILLLVAVVLFLLGAFAVQVGTLDLVTLGLAAFAASFLVESWKR
Ga0326597_105223671	3300031965	Soil	MSMKPGAIVLLVAVVLFLLAAFEVKLGTLNLVTLGLAAFAGSFLLDTWKR
Ga0326597_108413592	3300031965	Soil	LNASAGSILLIVAVILFVLSAVGIALGTLDLVTLGLAAFAGSFLVGRSWRR
Ga0214472_102304391	3300033407	Soil	LLVAVVLFLLAAFDVSLGELNLATLGFAAFAGSFLLDSWKR
Ga0214471_100798244	3300033417	Soil	MSMKPGAILLLIAVVLFLLAAFDVELGTLDLVTLGFAAFAGSFLLDSWKR
Ga0214471_101716472	3300033417	Soil	MKPGAIVLLVAVVLFLLAAFEVKLGTLNLVNLGLAAFAGSFLLDTWKR
Ga0214471_103494111	3300033417	Soil	LFVLSAVGIALGTLDLVTLGLAAFAGSFLVGRSWRR
Ga0364938_054868_151_303	3300034114	Sediment	MRFTPRAILLLVAVVLFLLAAFAVQVGTFDLVTLGLAAFAASFLVESWKR
Ga0364938_102688_427_555	3300034114	Sediment	LLLVAVVLFLLAAFAVQVGTFDLVTLGLAAFAASLLVESWKR
Ga0364932_0112609_855_1007	3300034177	Sediment	VRFTPRAILLLVAVVLFLLGAFAVQVRTLDLVTLDLAAFAASFLVESWKR
Ga0364934_0372380_293_445	3300034178	Sediment	VRFTPGAILLLVAVVLFLLGAFAVQVGTFDLVTLGLAAFAASFLVESWKR
Ga0334931_012331_793_948	3300034377	Sub-Biocrust Soil	MRGGLNLGMILLLIAVVLFVLAAFGVALGTVGLVPLGLAAFAGAFVVDRWT
Ga0364936_064602_542_682	3300034773	Sediment	PGAILLLVAVVLFLLAAFEVKLGTLNLVTLGLAAFAGSFLLGTWKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F043269

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences