NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F043115

Metagenome / Metatranscriptome Family F043115

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F043115
Family Type Metagenome / Metatranscriptome
Number of Sequences 157
Average Sequence Length 42 residues
Representative Sequence MATHAAATRNISGLARALAQHGLMTEYEAETLQTQAQQAG
Number of Associated Samples 141
Number of Associated Scaffolds 157

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 28.03 %
% of genes near scaffold ends (potentially truncated) 99.36 %
% of genes from short scaffolds (< 2000 bps) 92.99 %
Associated GOLD sequencing projects 133
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (82.166 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen
(6.369 % of family members)
Environment Ontology (ENVO) Unclassified
(43.312 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(42.675 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 48.53%    β-sheet: 0.00%    Coil/Unstructured: 51.47%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 157 Family Scaffolds
PF03471CorC_HlyC 90.45
PF01578Cytochrom_C_asm 2.55
PF13519VWA_2 0.64
PF00886Ribosomal_S16 0.64
PF02978SRP_SPB 0.64
PF00521DNA_topoisoIV 0.64

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 157 Family Scaffolds
COG0188DNA gyrase/topoisomerase IV, subunit AReplication, recombination and repair [L] 0.64
COG0228Ribosomal protein S16Translation, ribosomal structure and biogenesis [J] 0.64
COG0541Signal recognition particle GTPaseIntracellular trafficking, secretion, and vesicular transport [U] 0.64

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms82.17 %
UnclassifiedrootN/A17.83 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000854|WSSedB2T2DRAFT_1021266All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales635Open in IMG/M
3300001213|JGIcombinedJ13530_103533113All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium645Open in IMG/M
3300001213|JGIcombinedJ13530_107614149All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium605Open in IMG/M
3300004463|Ga0063356_104327080All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales611Open in IMG/M
3300004782|Ga0062382_10556859All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria557Open in IMG/M
3300005181|Ga0066678_10279927All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1086Open in IMG/M
3300005181|Ga0066678_10930841All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria567Open in IMG/M
3300005290|Ga0065712_10209261All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1079Open in IMG/M
3300005330|Ga0070690_100340446All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1086Open in IMG/M
3300005331|Ga0070670_100065524All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3117Open in IMG/M
3300005331|Ga0070670_101606959All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales598Open in IMG/M
3300005337|Ga0070682_101957533All Organisms → cellular organisms → Bacteria → Proteobacteria515Open in IMG/M
3300005356|Ga0070674_101244456All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales662Open in IMG/M
3300005364|Ga0070673_100505253All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1094Open in IMG/M
3300005437|Ga0070710_10660335All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria734Open in IMG/M
3300005458|Ga0070681_11339688All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria639Open in IMG/M
3300005539|Ga0068853_102204613All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria534Open in IMG/M
3300005543|Ga0070672_100750755All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria856Open in IMG/M
3300005543|Ga0070672_100779212All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria840Open in IMG/M
3300005564|Ga0070664_101652405All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria607Open in IMG/M
3300005569|Ga0066705_10936756All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae514Open in IMG/M
3300005578|Ga0068854_100144801All Organisms → cellular organisms → Bacteria → Proteobacteria1827Open in IMG/M
3300005615|Ga0070702_100341575All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1051Open in IMG/M
3300005615|Ga0070702_101374715All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria576Open in IMG/M
3300005618|Ga0068864_100281458All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales1552Open in IMG/M
3300005719|Ga0068861_101008068All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales795Open in IMG/M
3300005764|Ga0066903_102566959All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria987Open in IMG/M
3300005886|Ga0075286_1054706All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria565Open in IMG/M
3300005995|Ga0066790_10077166All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1433Open in IMG/M
3300006046|Ga0066652_101600719All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae599Open in IMG/M
3300006163|Ga0070715_10357902All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria799Open in IMG/M
3300006224|Ga0079037_102221613All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria548Open in IMG/M
3300006578|Ga0074059_11535969All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1498Open in IMG/M
3300006579|Ga0074054_11833615All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria739Open in IMG/M
3300006604|Ga0074060_11557620All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria536Open in IMG/M
3300006806|Ga0079220_11944881All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae523Open in IMG/M
3300006953|Ga0074063_10200931All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1100Open in IMG/M
3300007076|Ga0075435_101685407All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales556Open in IMG/M
3300009137|Ga0066709_103783863All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium549Open in IMG/M
3300009177|Ga0105248_13255372Not Available516Open in IMG/M
3300009509|Ga0123573_10422811All Organisms → cellular organisms → Bacteria → Proteobacteria1275Open in IMG/M
3300009527|Ga0114942_1367991All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium568Open in IMG/M
3300010326|Ga0134065_10501278All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium506Open in IMG/M
3300010401|Ga0134121_11827438All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium635Open in IMG/M
3300010401|Ga0134121_13263398All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium502Open in IMG/M
3300011106|Ga0151489_1733500All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium536Open in IMG/M
3300012200|Ga0137382_10953280All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium617Open in IMG/M
3300012205|Ga0137362_11356322All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium597Open in IMG/M
3300012353|Ga0137367_11221572All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium501Open in IMG/M
3300012356|Ga0137371_11312619All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium535Open in IMG/M
3300012955|Ga0164298_10212924All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1139Open in IMG/M
3300012971|Ga0126369_11751971All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium710Open in IMG/M
3300013102|Ga0157371_11539526All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium519Open in IMG/M
3300013104|Ga0157370_10298043All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1489Open in IMG/M
3300013296|Ga0157374_10127400All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae2461Open in IMG/M
3300013296|Ga0157374_12337001All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium562Open in IMG/M
3300013306|Ga0163162_10276349All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1812Open in IMG/M
3300013307|Ga0157372_12231320All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium629Open in IMG/M
3300014319|Ga0075348_1013732All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1599Open in IMG/M
3300014324|Ga0075352_1300003All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium512Open in IMG/M
3300014968|Ga0157379_11303359Not Available701Open in IMG/M
3300014969|Ga0157376_10291899All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1540Open in IMG/M
3300015190|Ga0167651_1099471All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium546Open in IMG/M
3300015255|Ga0180077_1111439All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium577Open in IMG/M
3300015371|Ga0132258_10786556All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2398Open in IMG/M
3300015374|Ga0132255_105549113All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium534Open in IMG/M
3300017959|Ga0187779_10192494All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1273Open in IMG/M
3300018060|Ga0187765_10779450All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium636Open in IMG/M
3300018071|Ga0184618_10504351All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium507Open in IMG/M
3300018476|Ga0190274_12730450Not Available590Open in IMG/M
3300018920|Ga0190273_11959031All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Isosphaerales → Isosphaeraceae → Singulisphaera541Open in IMG/M
3300020001|Ga0193731_1112682All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium695Open in IMG/M
3300020006|Ga0193735_1089767All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium869Open in IMG/M
3300020022|Ga0193733_1076769All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium938Open in IMG/M
3300021080|Ga0210382_10437752All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium579Open in IMG/M
3300021403|Ga0210397_11547460All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium515Open in IMG/M
3300021432|Ga0210384_10510207All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1082Open in IMG/M
3300021445|Ga0182009_10135661All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1157Open in IMG/M
3300022309|Ga0224510_10010915All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria4587Open in IMG/M
3300022756|Ga0222622_10378609All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium992Open in IMG/M
3300023066|Ga0247793_1028200Not Available839Open in IMG/M
3300025893|Ga0207682_10453764Not Available607Open in IMG/M
3300025906|Ga0207699_10197160All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1362Open in IMG/M
3300025906|Ga0207699_10961875All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium631Open in IMG/M
3300025917|Ga0207660_10556038Not Available933Open in IMG/M
3300025918|Ga0207662_10062758All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2233Open in IMG/M
3300025921|Ga0207652_10780324Not Available849Open in IMG/M
3300025925|Ga0207650_10030292All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3896Open in IMG/M
3300025940|Ga0207691_10110584All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2444Open in IMG/M
3300025941|Ga0207711_11275417Not Available677Open in IMG/M
3300025941|Ga0207711_11627882All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium589Open in IMG/M
3300025945|Ga0207679_10155562All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1866Open in IMG/M
3300025945|Ga0207679_10578384All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1010Open in IMG/M
3300025960|Ga0207651_12155764Not Available500Open in IMG/M
3300025961|Ga0207712_11211373Not Available674Open in IMG/M
3300025972|Ga0207668_11018792All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium740Open in IMG/M
3300025986|Ga0207658_11919791All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium539Open in IMG/M
3300025986|Ga0207658_12070867Not Available517Open in IMG/M
3300026023|Ga0207677_10659667Not Available924Open in IMG/M
3300026067|Ga0207678_10416212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1165Open in IMG/M
3300026088|Ga0207641_10093741All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2632Open in IMG/M
3300026088|Ga0207641_11637774All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium645Open in IMG/M
3300026118|Ga0207675_101159082Not Available793Open in IMG/M
3300026121|Ga0207683_10558677All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1058Open in IMG/M
3300026310|Ga0209239_1047163All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1958Open in IMG/M
3300027547|Ga0209864_1021244Not Available766Open in IMG/M
3300027665|Ga0209983_1078668Not Available738Open in IMG/M
3300027683|Ga0209392_1025128All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1913Open in IMG/M
3300027738|Ga0208989_10045174All Organisms → cellular organisms → Bacteria1529Open in IMG/M
3300027765|Ga0209073_10413310All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium555Open in IMG/M
3300027831|Ga0209797_10260526Not Available727Open in IMG/M
3300027842|Ga0209580_10031963All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria2394Open in IMG/M
3300027871|Ga0209397_10633820All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium535Open in IMG/M
3300027882|Ga0209590_11013738All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium517Open in IMG/M
3300027887|Ga0208980_10634923All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium607Open in IMG/M
3300027915|Ga0209069_10680817All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium602Open in IMG/M
3300028379|Ga0268266_10033540All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria4364Open in IMG/M
3300028381|Ga0268264_10958353Not Available861Open in IMG/M
3300028381|Ga0268264_11713163All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium639Open in IMG/M
3300028665|Ga0302160_10085816Not Available678Open in IMG/M
3300028770|Ga0302258_1088232Not Available747Open in IMG/M
3300028777|Ga0302290_10195377All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium540Open in IMG/M
3300028792|Ga0307504_10407457All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium536Open in IMG/M
3300030002|Ga0311350_10191322All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1818Open in IMG/M
3300030003|Ga0302172_10006648All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3314Open in IMG/M
3300030003|Ga0302172_10128094Not Available782Open in IMG/M
3300030943|Ga0311366_11093764Not Available688Open in IMG/M
3300031521|Ga0311364_12202564All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium539Open in IMG/M
3300031595|Ga0265313_10426761All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium517Open in IMG/M
3300031819|Ga0318568_10807627All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium582Open in IMG/M
3300031820|Ga0307473_10124112All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1423Open in IMG/M
3300031833|Ga0310917_11138368All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium520Open in IMG/M
3300031873|Ga0315297_11391104All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium569Open in IMG/M
3300031908|Ga0310900_11404221All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium586Open in IMG/M
3300031912|Ga0306921_10851344All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1038Open in IMG/M
3300031918|Ga0311367_10649976Not Available1074Open in IMG/M
3300031918|Ga0311367_12087915All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium545Open in IMG/M
3300031997|Ga0315278_10521007All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1222Open in IMG/M
3300031997|Ga0315278_11358445Not Available690Open in IMG/M
3300031999|Ga0315274_11155671All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria772Open in IMG/M
3300032075|Ga0310890_10629842Not Available833Open in IMG/M
3300032256|Ga0315271_11021909Not Available714Open in IMG/M
3300032397|Ga0315287_11277908All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium841Open in IMG/M
3300032770|Ga0335085_11401819All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium732Open in IMG/M
3300032782|Ga0335082_10212584All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1830Open in IMG/M
3300033414|Ga0316619_11101562All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria697Open in IMG/M
3300033418|Ga0316625_102770684All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium501Open in IMG/M
3300033433|Ga0326726_12469215All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium504Open in IMG/M
3300033434|Ga0316613_11286255All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium504Open in IMG/M
3300033475|Ga0310811_10674948All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1009Open in IMG/M
3300033482|Ga0316627_102985261All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium503Open in IMG/M
3300033483|Ga0316629_10606852All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium814Open in IMG/M
3300033487|Ga0316630_10614282All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium909Open in IMG/M
3300033805|Ga0314864_0028391All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1203Open in IMG/M
3300034147|Ga0364925_0199574Not Available736Open in IMG/M
3300034157|Ga0370506_074788Not Available735Open in IMG/M
3300034176|Ga0364931_0180665Not Available685Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen6.37%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere5.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.10%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil5.10%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.46%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment3.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.82%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.82%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.18%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.18%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland2.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.55%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.55%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.55%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.55%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.91%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment1.27%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.27%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.27%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.27%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.27%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.27%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.27%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.27%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.27%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.27%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.27%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.64%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland0.64%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.64%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.64%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater0.64%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment0.64%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.64%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.64%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.64%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.64%
Mangrove SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment0.64%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.64%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.64%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.64%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.64%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.64%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.64%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.64%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.64%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.64%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.64%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.64%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.64%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.64%
SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sand0.64%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.64%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.64%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.64%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.64%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.64%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.64%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.64%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.64%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000854Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site B2 TuleEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004782Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2FreshEnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005886Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205EnvironmentalOpen in IMG/M
3300005995Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006224Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaGEnvironmentalOpen in IMG/M
3300006578Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006579Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006604Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009509Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11EnvironmentalOpen in IMG/M
3300009527Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold CreekEnvironmentalOpen in IMG/M
3300010326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011106Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014319Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D1EnvironmentalOpen in IMG/M
3300014324Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1EnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015190Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4a, rock/ice/stream interface)EnvironmentalOpen in IMG/M
3300015255Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT466_16_10DEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300022309Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_4_1EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300023066Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300027547Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14 (SPAdes)EnvironmentalOpen in IMG/M
3300027665Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027683Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027831Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027871Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027887Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 BulkEnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028665Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_3EnvironmentalOpen in IMG/M
3300028770Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_4EnvironmentalOpen in IMG/M
3300028777Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_3EnvironmentalOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300030002II_Fen_N1 coassemblyEnvironmentalOpen in IMG/M
3300030003Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_3EnvironmentalOpen in IMG/M
3300030943III_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300031521III_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300031595Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaGHost-AssociatedOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031918III_Fen_N3 coassemblyEnvironmentalOpen in IMG/M
3300031997Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0EnvironmentalOpen in IMG/M
3300031999Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033434Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_bEnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033483Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_AEnvironmentalOpen in IMG/M
3300033487Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_AEnvironmentalOpen in IMG/M
3300033805Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10EnvironmentalOpen in IMG/M
3300034147Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17EnvironmentalOpen in IMG/M
3300034157Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_18EnvironmentalOpen in IMG/M
3300034176Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
WSSedB2T2DRAFT_102126613300000854WetlandMATHAASTRNISGLARALAQHGLMSEQEAENQQQAAHQAGVTFVEKILE
JGIcombinedJ13530_10353311323300001213WetlandMATHAATTRNISGLARAMAQHGVMTEYEAETLHNQAQLAGVTFVEQ
JGIcombinedJ13530_10761414913300001213WetlandMATHAATTRNISGLARAMAQHGLMSEYDAEALQSQA
Ga0063356_10432708013300004463Arabidopsis Thaliana RhizosphereMATHAASTRNISGLARALAQHGLMTEYEAETLQTQAAQAGVSFVDHVL
Ga0062382_1055685923300004782Wetland SedimentMATHAASTRNISGLARALAQHGLMTEYEAETLQTQAQQAGATFVDHVLAGKRIT
Ga0066678_1027992713300005181SoilMATHAATRTISGLARAMVQHGLLSEYDAETLQGQAQAANIGFVEQML
Ga0066678_1093084113300005181SoilMATKAAVPSISGLARAMVQHGLLSEYDAETLQGQAQTASIGFVEQ
Ga0065712_1020926123300005290Miscanthus RhizosphereMATQAATRNISGLARAMVQQGLLSEYDADALHTQAKAANLGFVEQVLL
Ga0070690_10034044623300005330Switchgrass RhizosphereMATHAASTRNISGLARALAQHGLMTEFEAEALQTQAQQAGTTFV
Ga0070670_10006552413300005331Switchgrass RhizosphereMATQAAVRNISGLARAMVQQGLLSEFDADALQTQAKAANLGFVEQVLVSKRMTA
Ga0070670_10160695913300005331Switchgrass RhizosphereMATHAATASRNISGLARALAQSGLMSEYEAEALQTQAQSA
Ga0070682_10195753323300005337Corn RhizosphereMATQAAVRNISGLARAMVQQGLLSEFDADALQTQAKAASLGFVEQVLVSKRMTAQ
Ga0070674_10124445623300005356Miscanthus RhizosphereMATHAASTRNITGLARALAQHGLMTEFEAEALQTQAQQAGVPFVDHVIT
Ga0070673_10050525323300005364Switchgrass RhizosphereMATHVAATRNISGLARALAQHGVMSEHEAEAMQTQAQSSGV
Ga0070710_1066033523300005437Corn, Switchgrass And Miscanthus RhizosphereMATNAAARTISGLARAMVQHGLLSEYDAETLQSQAQAASIGFVEQ
Ga0070681_1133968813300005458Corn RhizosphereMATHAATRNISGLARALAQHGVMSEAEAEALQVQSQSSGIPF
Ga0068853_10220461313300005539Corn RhizosphereMATHAATRNISGLARALAQSGLMSEYEAETLQTQAQAAGISFV
Ga0070672_10075075513300005543Miscanthus RhizosphereMATQAAVRNISGLARAMVQQGLLSEFDADALQTQAKAANL
Ga0070672_10077921213300005543Miscanthus RhizosphereMATHAAATRNISGLARALAQHGVMSEYEAEAMQTQAQSAGV
Ga0070664_10165240523300005564Corn RhizosphereMATHAATRNISGLARALAQHGVMSEHEAEAMQAQAQTAGVA
Ga0066705_1093675613300005569SoilMATHAATRNLSGLARALAQHGVMSEHEAEAMQTQAQS
Ga0068854_10014480133300005578Corn RhizosphereMATHAATRNISGLARALAQSGLMTEYEAESLQTQAQVAGISFVE
Ga0070702_10034157513300005615Corn, Switchgrass And Miscanthus RhizosphereMATHAATRNISGLARALAQHGVMSEHEAEALQTQAQTSGASFVE
Ga0070702_10137471523300005615Corn, Switchgrass And Miscanthus RhizosphereMATHAATRNISGLARALAQHGVMSEAEAEALQVQSQSSGIPFVEQV
Ga0068864_10028145823300005618Switchgrass RhizosphereMATHAATRNISGLARALAQSGLMSEFEAETLQTQAQQ
Ga0068861_10100806823300005719Switchgrass RhizosphereMATHAATRNISGLARALAQSGLMSEYEAEALQTQAQT
Ga0066903_10256695923300005764Tropical Forest SoilMATTAATRNISGLARAMVQHGLLSENDAEALQTQAQATNIGFV
Ga0075286_105470623300005886Rice Paddy SoilMATHAAATRNISGLARALAQHGVMSESEAEALQLQSQSSGVPF
Ga0066790_1007716623300005995SoilMATKAAAQNLSGLARAMVQHGLLSEYDAETLQGQAQTANIGFVE
Ga0066652_10160071913300006046SoilMATHAATRTISGLARAMVQHGLLSEYEAESLQGQAQAASIGFVEQMLL
Ga0070715_1035790213300006163Corn, Switchgrass And Miscanthus RhizosphereMATHAATRNISGLARALAQHGVMSEHEAEALQTQAQTSGASFVETV
Ga0079037_10222161323300006224Freshwater WetlandsMATHAASTRNISGLARALAQHGLMTEFEAEALQTQ
Ga0074059_1153596913300006578SoilMATHAATRNISGLARALAQHGVMSEYEAETLQTQAQ
Ga0074054_1183361523300006579SoilMATHAATRNISGLARALAQHGVMSEYEAETLQTQAQSTGASFV
Ga0074060_1155762013300006604SoilMATHAATRNISGLARALAQHGIMSEYEAETLQTQAQS
Ga0079220_1194488113300006806Agricultural SoilMATTAAARTISGLARAMVQHGLLSEYDAEAMQSQAQ
Ga0074063_1020093113300006953SoilMATTAAPRTISGLARAMVQHGLLSEYDADALQTQAQAASIGFVEQVL
Ga0075435_10168540713300007076Populus RhizosphereMATHAASTRNISGLARALAQHGLMTEYEAETLQTQAAQAGVSFVDHVLAGKR
Ga0066709_10378386323300009137Grasslands SoilMATHAASTRNITGLARALAQHGLMTEFEAEALQTQAQQAGVPFVD
Ga0105248_1325537223300009177Switchgrass RhizosphereMATHAASTRNLSGLARALAQHGLMTEFEAEALQTQAAQAGVTFVDH
Ga0123573_1042281123300009509Mangrove SedimentMATPVTTPKISGLARALAQHGLLTENEAHGLQTQAATAGINFAEQIVL
Ga0114942_136799113300009527GroundwaterMVTHEITRNISGLARALAQQGLVTEAEAEALQTQAQTAGVSF
Ga0134065_1050127823300010326Grasslands SoilMATHVATRNISGLARALAQHGVMSEHEAEGMQSQAQSAGVTFVE
Ga0134121_1182743813300010401Terrestrial SoilMATHAASTRNITGLARALAQHGLMTEFEAEALQTQAQQAGVPFVDHVITGKKIT
Ga0134121_1326339813300010401Terrestrial SoilMATHAATRTISGLARAMVQHGLLSEYEAESLQSQAQAASIGF
Ga0151489_173350013300011106SoilMATHAASSRNISGLARALAQHRLMTEFEAETLQTQAA
Ga0137382_1095328023300012200Vadose Zone SoilMATHAATRTISGLARAMVQHGLLSEYDAETLQGQA
Ga0137362_1135632213300012205Vadose Zone SoilMATNAAVRTISGLARAMVQHGLLSEYDADTMQSQAQAASIGFVE
Ga0137367_1122157223300012353Vadose Zone SoilMATHAATRTISGLARAMVQHGLLSEYDAETLQSQAQAAN
Ga0137371_1131261913300012356Vadose Zone SoilMLLKMATKAATQNISGLARAMVQHGLLSEYDAETLQ
Ga0164298_1021292413300012955SoilMATQAAVRNISGLARAMVQQGLLSEFDADALHTQAKAANLGFVEQVLVSKRMTASQ
Ga0126369_1175197123300012971Tropical Forest SoilMATNAAPRTISGLARAMVQHGLVSEYDAETIQSQA*
Ga0157371_1153952613300013102Corn RhizosphereMATHAATRNLSGLARAFAQHGLLPESEADSLQTQAQSAGITFVEQVL
Ga0157370_1029804313300013104Corn RhizosphereMATHATTRNISGLARALASAGVMSEYDAEAMQLQSQQAGIT
Ga0157374_1012740013300013296Miscanthus RhizosphereMATQAAVRNISGLARAMVQQGLLSEFDADALQTQAKAANLGFVEQV
Ga0157374_1233700113300013296Miscanthus RhizosphereMATHAATRNISGLARALAQSGMMSDYEAETLQTQAQSANISF
Ga0163162_1027634933300013306Switchgrass RhizosphereMATHAATRNISGLARALAQHGVMSEHDAELLQSQAQTSNVTFV
Ga0157372_1223132023300013307Corn RhizosphereMATHVAATRNISGLARALAQHGVMSESEAEALQQQSQSSNV
Ga0075348_101373223300014319Natural And Restored WetlandsMATHAASTRDISGLARALAQHGLMTEFEAEALQTQAQQVGATFVEH
Ga0075352_130000313300014324Natural And Restored WetlandsMATHAASTRNISGLARALAQHGLMTEYEAETLQTQAQQ
Ga0157379_1130335923300014968Switchgrass RhizosphereMVSHEITRTISGLARALAQQGLMTESDAEALQSQAQTAGVSFVE
Ga0157376_1029189913300014969Miscanthus RhizosphereMATQAAVRNISGLARAMVQQGLLSEFDADALQTQAKAANLGFVEQVL
Ga0167651_109947113300015190Glacier Forefield SoilMATKAATQNLSGLARAMVQHGLLSEYDAETLQGQAQTGNIGFVE
Ga0180077_111143923300015255SoilMATHAATRNLSGLAHALAQQGVVSENDAAAIQSQAAQSSISFVEQLL
Ga0132258_1078655613300015371Arabidopsis RhizosphereMATHAAATRNLSGLARALAQHGMMTEYDAETLQTQAQQANVSF
Ga0132255_10554911323300015374Arabidopsis RhizosphereMATHVAATRNISGLARALAQHGVMAESEAEALQQQS
Ga0187779_1019249423300017959Tropical PeatlandVATATTAVSRTVSGLARAMVQQGLLSEHDADALQGQAQ
Ga0187765_1077945013300018060Tropical PeatlandMATHVASTRNISGLARALAQHGLMTEYEAETLQTQAQQAGVSFVDHDAFGS
Ga0184618_1050435113300018071Groundwater SedimentMLLTMATKAATQNISGLARAMVQHGLLSEYDAETLQG
Ga0190274_1273045023300018476SoilMATHAATRNISGLARALAQHGVMSEAEAEAIQVQSQ
Ga0190273_1195903113300018920SoilMATHAATRNLSGLARALAQQGLVTEGDADAIQSQAAQSGMTFVEQLLQNKR
Ga0193731_111268223300020001SoilMATKAATQNISGLARAMVQHGLLSEYDAETLQGQAQTASI
Ga0193735_108976713300020006SoilMLLTMATKAATQNISGLARAMVQHGLLSEYDAETLQ
Ga0193733_107676923300020022SoilMATKAATQNISGLARAMVQHGLLSEYDAETLQGQA
Ga0210382_1043775223300021080Groundwater SedimentMATHAATRTISGLARAMVQHGLLSEYDAEALQSQAQA
Ga0210397_1154746013300021403SoilMATHATTRNISGLARALAQAGVMSEFDAEAMQLQSQQAGIT
Ga0210384_1051020723300021432SoilMATKAAVPSISGLARAMVQHGLLSEYDAETLQGQAQTASIGF
Ga0182009_1013566123300021445SoilMATHAATTRNISGLARALAQHGLMSEGDAEAAQAQART
Ga0224510_1001091563300022309SedimentMATHAAQRNLSGLARALAQQGLVSEADADAIQSQAV
Ga0222622_1037860923300022756Groundwater SedimentMATHAATRNISGLARALAQHGVMSEHDAEALQSQAQ
Ga0247793_102820013300023066SoilMATHAATRNLSGLARAFAQHGLMPESEADSFQTQAQSAGIT
Ga0207682_1045376413300025893Miscanthus RhizosphereMATHAATRNISGLARALAQHGVMSEAEAEAIQVQS
Ga0207699_1019716023300025906Corn, Switchgrass And Miscanthus RhizosphereMATQAATRNISGLARAMVQQGLLSEYDADALHTQAKA
Ga0207699_1096187523300025906Corn, Switchgrass And Miscanthus RhizosphereMATHAAATRNISGLARALAQNGVMSEYEAEAMQTQA
Ga0207660_1055603813300025917Corn RhizosphereMATHAATRNISGLARALAQHGVMSESEAEALQVQSQS
Ga0207662_1006275833300025918Switchgrass RhizosphereMATHAATRNISGLARALAQSGLMTEYEAESLQTQAQVAGISF
Ga0207652_1078032423300025921Corn RhizosphereMATHAATRNISGLARALAQHGVMSESEAEALQVQDR
Ga0207650_1003029213300025925Switchgrass RhizosphereMATHAASTRNLSGLARALAQHGLMTEFEAEALQTQAAQAGA
Ga0207691_1011058433300025940Miscanthus RhizosphereMATHAASTRNLSGLARALAQHGLMTEFEAEALQTQA
Ga0207711_1127541723300025941Switchgrass RhizosphereMATHAASTRNISGLARALAQHGLMTEFEAEALQTQAQQAGTTFVDHV
Ga0207711_1162788223300025941Switchgrass RhizosphereMATHAATRNISGLARALAQSGLMSEYEAEALQTQAQTAGVSF
Ga0207679_1015556233300025945Corn RhizosphereMATHAATRNLSGLARALAQHGVMSEHEAEALQTQAQSSGVTF
Ga0207679_1057838413300025945Corn RhizosphereMATHATATRNISGLARALAQHGVMSEYEAEAMQTQAQSSGV
Ga0207651_1215576413300025960Switchgrass RhizosphereMATHAASTRNITGLARALAQHGLMTEFEAEALQTQAQQAGVPFVDHVITGKKITAT
Ga0207712_1121137313300025961Switchgrass RhizosphereMATHAATRNISGLARALAQHGVMSEHEAEALQTQAQTSGA
Ga0207668_1101879223300025972Switchgrass RhizosphereMATHAATRNISGLARALAQHGVMSEAEAEALQTQSQSSGVP
Ga0207658_1191979123300025986Switchgrass RhizosphereMATHAATRNISGLARALAQSGMMSDYEAETLQTQAQSANISFVEQ
Ga0207658_1207086723300025986Switchgrass RhizosphereMATHAATRNISGLARALAQHGVMSEAEAEALQTQSQSSGVPFVEQV
Ga0207677_1065966723300026023Miscanthus RhizosphereMATHAASTRNLSGLARALAQHGLMTEFEAEALQTQAAQAGV
Ga0207678_1041621233300026067Corn RhizosphereMATHAASTRNISGLARALAQHGLMTEFEAEALQTQAQQAGT
Ga0207641_1009374143300026088Switchgrass RhizosphereMATHAATRNISGLARALAQSGLMSEFEAETLQTQAQSA
Ga0207641_1163777423300026088Switchgrass RhizosphereMATHAASTRNITGLARALAQHGLMTEFEAEALQTQAQQAGVPFVDHVITGK
Ga0207675_10115908223300026118Switchgrass RhizosphereMATHAATRNISGLARALAQSGLMSEYEAEALQTQAQ
Ga0207683_1055867713300026121Miscanthus RhizosphereMATHAAATRNISGLARALAQHGLMTEYEAETLQTQAQ
Ga0209239_104716333300026310Grasslands SoilMATKAAVPSISGLARAMVQHGLLSEYDAETLQGQAQT
Ga0209864_102124413300027547SandMATHAASTRNISGLARALAQHGLMTEFEAEALQTQAQQVGATFVDHV
Ga0209983_107866813300027665Arabidopsis Thaliana RhizosphereMATHAATRNLSGLARALAQHGLMPEVEADSFQTQAASAGI
Ga0209392_102512833300027683Freshwater SedimentMATHAAQRNLSGLARALAQQGLVSEADADAIQSQA
Ga0208989_1004517433300027738Forest SoilMATKAAVSSVSGLARAMVQHGLLSEYDAETFQGQAQTASIGFVEQL
Ga0209073_1041331013300027765Agricultural SoilMATTAAARTISGLARAMVQHGLLSEYDAEAMQSQAQSANIGF
Ga0209797_1026052613300027831Wetland SedimentMATHAASTRNISGLARALAQHGLMTEYEAETLQTQAQQAGASFVDHVLA
Ga0209580_1003196313300027842Surface SoilMMATHAATRNISGLARALAQHGVMSEQEAEALQVQSQ
Ga0209397_1063382023300027871WetlandMATHAASTRNLSGLARALAQHGLLSEYDAEALQSQAQSAG
Ga0209590_1101373813300027882Vadose Zone SoilMATHAATRTISGLARAMVQHGLLSEYDAETLQGQAQAANIGF
Ga0208980_1063492313300027887WetlandMATHAATTRNLSGLARALAQHGLLSEYDADAIHTQ
Ga0209069_1068081713300027915WatershedsMATHAATRNISGLARALAQHGVMSEHEAEALQSQAQSSGASFV
Ga0268266_1003354013300028379Switchgrass RhizosphereMATHAASTRNITGLARALAQHGLMTEFEAEALQTQAQQAGVPFVDHVITG
Ga0268264_1095835323300028381Switchgrass RhizosphereMATHAATRNISGLARALAQHGVMSEAEAEALQTQSQ
Ga0268264_1171316323300028381Switchgrass RhizosphereMATHAATRNISGLARALAQHGLMTEYDAEALQTQSQQAGVSF
Ga0302160_1008581613300028665FenMATHAATRNISGLARALAQHGVMSEHEAESLQTQAQSSGASFVE
Ga0302258_108823223300028770FenMATHAATRNISGLARALAQHGVMSEHEAESLQTQSESTGV
Ga0302290_1019537713300028777FenMATHAATRNISGLARALAQHGVMSEHEAESLQTQSEST
Ga0307504_1040745713300028792SoilMATHAATRTLSGLARAMVQHGLLSEYDAETLQTQAQ
Ga0311350_1019132233300030002FenMATHAAATRNLSGLARALAQHGLMTEFDAEALQTQAQQANVSFVEQL
Ga0302172_1000664843300030003FenMATHAATRNISGLARALAQHGVMSEHEAESLQTQAQSSGASFVETV
Ga0302172_1012809423300030003FenMATHAAATRNLSGLARAFAQHGLMTEFDAEALQTQAQQANVSFVEQ
Ga0311366_1109376413300030943FenMATTTGTSGPRNINGLARAMVQHGLLTEHDANTLQGQAQAANIGFVEQ
Ga0311364_1220256423300031521FenMATHAATRNISGLARALAQQGFMSEHEAETMQSQAQTSGAS
Ga0265313_1042676113300031595RhizosphereMATQAAATRNLSGLARALAQHGLMTESDAEALQTQAQQGNI
Ga0318568_1080762713300031819SoilMATHAAATRNISGLARALAQHGLMTEYEAETLQTQAQQAG
Ga0307473_1012411213300031820Hardwood Forest SoilMATHAASTRNISGLARALAQHGLMTEYEAETLQTQ
Ga0310917_1113836823300031833SoilMATHAAATRNISGLARALAQHGLMTEYEAETLQTQA
Ga0315297_1139110413300031873SedimentMATHAASTRNISGLARALAQHGLMTEFEAETLQVQAQQAGTTFVDHVLAG
Ga0310900_1140422123300031908SoilMATHAASTRNLSGLARALAQHGLMTEFEAEALQTQAQQAG
Ga0306921_1085134423300031912SoilMATHAASTRNISGLARALAQHGLMTEYEAETLQTQAQQAGVS
Ga0311367_1064997623300031918FenMATHAATRNISGLARALAQHGVMSEHEAETLQSQAQSTGASF
Ga0311367_1208791513300031918FenMVSHEITRNISGLARALAQQGLMTEQEAETLQTQAHTAGV
Ga0315278_1052100723300031997SedimentMATHAASTRNISGLARALAQHGLMTEFEAETLQVQAQQAGTTFVDHV
Ga0315278_1135844513300031997SedimentMATHAASTRNISGLARALAQHGLMTEFEAEALQTQA
Ga0315274_1115567113300031999SedimentMATHAASTRNISGLARALAQHGLMTEFEAEALQTQAQQAGATFVD
Ga0310890_1062984223300032075SoilMATHAATRNISGLARALAQHGVMSEAEAEALQTQSQSS
Ga0315271_1102190923300032256SedimentMATHAASTRNISGLARALAQHGLMTEFEAEALQTQAQQVGATFVDHVIAS
Ga0315287_1127790813300032397SedimentMATHAASTRNISGLARALAQHGLMTEYEAETLQTQAQQA
Ga0335085_1140181923300032770SoilMATHAAPRNISGLARAMVQHGLLSEYDAETLQNQAQAANVG
Ga0335082_1021258413300032782SoilMATHVASTRNISGLARALAQHGLMTEYEAETLQTQAQQAGVSFVDH
Ga0316619_1110156223300033414SoilMATHAASTRNISGLARALAQHGLMTEYEAETLQTQAQQAGTTF
Ga0316625_10277068423300033418SoilMATHAASTRNLSGLARALAQHGLMTEFEAEALQTQAQQAGTA
Ga0326726_1246921513300033433Peat SoilMATHPATRDLSGLARAMVQHGLLSEYDADALQSQAHAAN
Ga0316613_1128625523300033434SoilMATHAATRNLSGLARALAQQGLVSESDADAMQTQAAASGITFAEQF
Ga0310811_1067494813300033475SoilMATHAATRNISGLARALAQHGVMSEAEAEALQTQSQSSG
Ga0316627_10298526113300033482SoilMATQAATTRNISGLARAMAQHGLMSEYEAEALQTQAQQGGITFV
Ga0316629_1060685223300033483SoilMATHAATRNLSGLARALAQQGLVSEPDADAMQTQAAASGITFAEQFLQ
Ga0316630_1061428213300033487SoilMATHEITRNLSGLARALAQQGLMGEHEADALQTQA
Ga0314864_0028391_3_1343300033805PeatlandMATHAATRDLSGLARAMVQHGLLSEYDAETLQTQATAASIGFVE
Ga0364925_0199574_1_1113300034147SedimentMATHAATRNISGLARALAQHGVMSEHEAEALQTQAQT
Ga0370506_074788_615_7343300034157Untreated Peat SoilMATHAATRTISGLARALAQSGVMSDYEAETLQSQAQASGV
Ga0364931_0180665_2_1333300034176SedimentMATHPATRDLSGLARAMVQHGLLSEYDADALQSQAQAANVGFVE

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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