Metagenome Family F042962

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042962
Family Type	Metagenome
Number of Sequences	157
Average Sequence Length	91 residues
Representative Sequence	MKATSITWRRTFPDSAPGTDGVAIFEGRVIGRVRHLTDLPRDPKPWSWSVTDPDLAGRPGWANTSGEMPSRRQAMARLIERWQELRRIGS
Number of Associated Samples	77
Number of Associated Scaffolds	156

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	50.96 %
% of genes near scaffold ends (potentially truncated)	42.04 %
% of genes from short scaffolds (< 2000 bps)	94.27 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (74.522 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (37.580 % of family members)
Environment Ontology (ENVO)	Unclassified (43.312 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.229 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.10% β-sheet: 22.88% Coil/Unstructured: 61.02%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.74.1.0: automated matches	d2irpa_	2irp	0.62036
c.51.6.2: XCC0632-like	d2iqia1	2iqi	0.61038
c.74.1.1: AraD-like aldolase/epimerase	d1e48p_	1e48	0.59648
c.74.1.0: automated matches	d4c24a1	4c24	0.59166
d.20.1.0: automated matches	d2ebma1	2ebm	0.58925

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 156 Family Scaffolds
PF01068	DNA_ligase_A_M	3.21
PF01569	PAP2	1.28
PF01594	AI-2E_transport	1.28
PF03775	MinC_C	1.28
PF14499	DUF4437	0.64
PF00166	Cpn10	0.64
PF00069	Pkinase	0.64
PF09339	HTH_IclR	0.64
PF07883	Cupin_2	0.64
PF08240	ADH_N	0.64
PF13924	Lipocalin_5	0.64
PF00497	SBP_bac_3	0.64
PF13730	HTH_36	0.64
PF04392	ABC_sub_bind	0.64
PF05598	DUF772	0.64
PF02371	Transposase_20	0.64
PF08279	HTH_11	0.64
PF01695	IstB_IS21	0.64
PF13583	Reprolysin_4	0.64

COG ID	Name	Functional Category	% Frequency in 156 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	3.21
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	3.21
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.56
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	1.28
COG0850	Septum site-determining protein MinC	Cell cycle control, cell division, chromosome partitioning [D]	1.28
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.64
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.64
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.64
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.52 %
All Organisms	root	All Organisms	25.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.52 %
cellular organisms	root	All Organisms → cellular organisms	25.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.52 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.52 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.02 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.64 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.52 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.11 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.64 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.52 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.74 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.91 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.64 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.64 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.64 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.52 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.18 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2.55 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.91 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.64 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.64 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.64 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.64 %
Rhodovibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.52 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.18 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1.27 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.91 %
Rhodovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Rhodovibrio	0.64 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.64 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	0.64 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.64 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.64 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.52 %
Bradyrhizobium ottawaense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	1.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.91 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.64 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.64 %
Sphingomonas morindae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas morindae	0.64 %
Magnetospirillum molischianum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum molischianum	0.64 %
Rhodovibrio sodomensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Rhodovibrio → Rhodovibrio sodomensis	0.64 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.64 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.64 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.52 %
Bradyrhizobium ottawaense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	1.91 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.91 %
Bradyrhizobium sp. SRL28	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	0.64 %
Microvirga massiliensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	0.64 %
Sphingomonas morindae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas morindae	0.64 %
Magnetospirillum molischianum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum molischianum	0.64 %
Rhodovibrio sodomensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Rhodovibrio → Rhodovibrio sodomensis	0.64 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.64 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.64 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10336225	Not Available	985	Open in IMG/M
3300002568\|C688J35102_119076498	Not Available	634	Open in IMG/M
3300002568\|C688J35102_119674487	Not Available	746	Open in IMG/M
3300002568\|C688J35102_120394775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1037	Open in IMG/M
3300002568\|C688J35102_120677780	Not Available	1338	Open in IMG/M
3300004081\|Ga0063454_100050323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1654	Open in IMG/M
3300004081\|Ga0063454_101592024	Not Available	563	Open in IMG/M
3300004081\|Ga0063454_101967456	Not Available	516	Open in IMG/M
3300004156\|Ga0062589_101626540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300004157\|Ga0062590_103021798	Not Available	504	Open in IMG/M
3300004463\|Ga0063356_102452483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodovibrionaceae → Rhodovibrio → Rhodovibrio sodomensis	798	Open in IMG/M
3300005328\|Ga0070676_11217950	Not Available	573	Open in IMG/M
3300005339\|Ga0070660_101783729	Not Available	524	Open in IMG/M
3300005356\|Ga0070674_100167495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1672	Open in IMG/M
3300005578\|Ga0068854_101852213	Not Available	554	Open in IMG/M
3300005616\|Ga0068852_101173698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	789	Open in IMG/M
3300005718\|Ga0068866_11437721	Not Available	505	Open in IMG/M
3300005840\|Ga0068870_11217557	Not Available	546	Open in IMG/M
3300005843\|Ga0068860_102624287	Not Available	523	Open in IMG/M
3300006046\|Ga0066652_100150630	Not Available	1950	Open in IMG/M
3300006196\|Ga0075422_10468947	Not Available	567	Open in IMG/M
3300006844\|Ga0075428_100243371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1940	Open in IMG/M
3300006844\|Ga0075428_100583424	Not Available	1194	Open in IMG/M
3300006845\|Ga0075421_101052162	Not Available	918	Open in IMG/M
3300006845\|Ga0075421_101809589	All Organisms → cellular organisms → Bacteria → Proteobacteria	657	Open in IMG/M
3300006846\|Ga0075430_101527316	Not Available	549	Open in IMG/M
3300006880\|Ga0075429_100842621	Not Available	803	Open in IMG/M
3300006881\|Ga0068865_101342491	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300006904\|Ga0075424_101695688	Not Available	669	Open in IMG/M
3300009094\|Ga0111539_10794801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1101	Open in IMG/M
3300009094\|Ga0111539_11124000	Not Available	913	Open in IMG/M
3300009094\|Ga0111539_12754101	Not Available	570	Open in IMG/M
3300009094\|Ga0111539_12768909	Not Available	568	Open in IMG/M
3300009100\|Ga0075418_12246027	Not Available	595	Open in IMG/M
3300009147\|Ga0114129_12478055	Not Available	620	Open in IMG/M
3300009156\|Ga0111538_11387087	Not Available	886	Open in IMG/M
3300009156\|Ga0111538_13008015	Not Available	589	Open in IMG/M
3300009156\|Ga0111538_13164380	Not Available	574	Open in IMG/M
3300009553\|Ga0105249_11834378	Not Available	679	Open in IMG/M
3300009553\|Ga0105249_13254205	Not Available	522	Open in IMG/M
3300009789\|Ga0126307_10027804	All Organisms → cellular organisms → Bacteria	4331	Open in IMG/M
3300009789\|Ga0126307_10228770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1493	Open in IMG/M
3300009789\|Ga0126307_10367642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1159	Open in IMG/M
3300009789\|Ga0126307_10413887	Not Available	1087	Open in IMG/M
3300009789\|Ga0126307_10553263	Not Available	929	Open in IMG/M
3300009789\|Ga0126307_10574455	Not Available	910	Open in IMG/M
3300009789\|Ga0126307_10850255	Not Available	737	Open in IMG/M
3300009789\|Ga0126307_10884923	Not Available	721	Open in IMG/M
3300009789\|Ga0126307_11178244	Not Available	620	Open in IMG/M
3300009789\|Ga0126307_11225422	Not Available	607	Open in IMG/M
3300009789\|Ga0126307_11709985	Not Available	511	Open in IMG/M
3300009840\|Ga0126313_10058155	Not Available	2748	Open in IMG/M
3300009840\|Ga0126313_10192108	Not Available	1563	Open in IMG/M
3300009840\|Ga0126313_10198673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1538	Open in IMG/M
3300009840\|Ga0126313_10321273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1214	Open in IMG/M
3300009840\|Ga0126313_10355962	Not Available	1154	Open in IMG/M
3300009840\|Ga0126313_11345314	Not Available	591	Open in IMG/M
3300010036\|Ga0126305_10650236	Not Available	711	Open in IMG/M
3300010036\|Ga0126305_10931403	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga → Microvirga massiliensis	594	Open in IMG/M
3300010037\|Ga0126304_10128466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1624	Open in IMG/M
3300010037\|Ga0126304_10165525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1436	Open in IMG/M
3300010037\|Ga0126304_10212233	Not Available	1268	Open in IMG/M
3300010037\|Ga0126304_10241942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1186	Open in IMG/M
3300010037\|Ga0126304_10829951	Not Available	627	Open in IMG/M
3300010038\|Ga0126315_10123174	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300010038\|Ga0126315_10521647	Not Available	760	Open in IMG/M
3300010040\|Ga0126308_10017894	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3761	Open in IMG/M
3300010040\|Ga0126308_10374325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	947	Open in IMG/M
3300010040\|Ga0126308_10450540	Not Available	864	Open in IMG/M
3300010040\|Ga0126308_10547473	Not Available	785	Open in IMG/M
3300010040\|Ga0126308_10639550	Not Available	728	Open in IMG/M
3300010040\|Ga0126308_10819728	Not Available	645	Open in IMG/M
3300010041\|Ga0126312_10058786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2583	Open in IMG/M
3300010041\|Ga0126312_10226418	Not Available	1310	Open in IMG/M
3300010041\|Ga0126312_10990223	Not Available	615	Open in IMG/M
3300010042\|Ga0126314_10064913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2411	Open in IMG/M
3300010042\|Ga0126314_10365242	Not Available	1037	Open in IMG/M
3300010042\|Ga0126314_11488338	Not Available	509	Open in IMG/M
3300010044\|Ga0126310_10055460	Not Available	2221	Open in IMG/M
3300010044\|Ga0126310_10193538	Not Available	1331	Open in IMG/M
3300010044\|Ga0126310_10193538	Not Available	1331	Open in IMG/M
3300010044\|Ga0126310_10572658	Not Available	837	Open in IMG/M
3300010044\|Ga0126310_10650219	Not Available	793	Open in IMG/M
3300010044\|Ga0126310_10768037	Not Available	738	Open in IMG/M
3300010044\|Ga0126310_10982218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300010044\|Ga0126310_11335841	Not Available	581	Open in IMG/M
3300010045\|Ga0126311_10030048	Not Available	3333	Open in IMG/M
3300010045\|Ga0126311_10309710	Not Available	1191	Open in IMG/M
3300010045\|Ga0126311_10487631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	962	Open in IMG/M
3300010045\|Ga0126311_10578624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	887	Open in IMG/M
3300010045\|Ga0126311_10590533	Not Available	878	Open in IMG/M
3300010045\|Ga0126311_10620385	Not Available	858	Open in IMG/M
3300010166\|Ga0126306_10024327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	4033	Open in IMG/M
3300010166\|Ga0126306_10114731	All Organisms → cellular organisms → Bacteria	1964	Open in IMG/M
3300010166\|Ga0126306_10352891	Not Available	1142	Open in IMG/M
3300010166\|Ga0126306_10512950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	949	Open in IMG/M
3300010166\|Ga0126306_10723475	Not Available	799	Open in IMG/M
3300010166\|Ga0126306_10915392	Not Available	712	Open in IMG/M
3300010166\|Ga0126306_11546153	Not Available	551	Open in IMG/M
3300010403\|Ga0134123_12051434	Not Available	631	Open in IMG/M
3300012212\|Ga0150985_100333515	Not Available	634	Open in IMG/M
3300012212\|Ga0150985_112608451	Not Available	523	Open in IMG/M
3300012212\|Ga0150985_116174003	Not Available	503	Open in IMG/M
3300012212\|Ga0150985_117607276	Not Available	658	Open in IMG/M
3300012212\|Ga0150985_121303502	Not Available	610	Open in IMG/M
3300012469\|Ga0150984_106453954	Not Available	510	Open in IMG/M
3300012469\|Ga0150984_106670750	Not Available	595	Open in IMG/M
3300012469\|Ga0150984_106830292	Not Available	929	Open in IMG/M
3300012469\|Ga0150984_109316187	Not Available	1074	Open in IMG/M
3300012469\|Ga0150984_110829455	Not Available	2256	Open in IMG/M
3300012469\|Ga0150984_113836866	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300012469\|Ga0150984_118114825	Not Available	937	Open in IMG/M
3300012896\|Ga0157303_10152268	Not Available	622	Open in IMG/M
3300012908\|Ga0157286_10170601	Not Available	710	Open in IMG/M
3300012908\|Ga0157286_10175698	Not Available	703	Open in IMG/M
3300012911\|Ga0157301_10331491	Not Available	567	Open in IMG/M
3300012912\|Ga0157306_10271238	Not Available	608	Open in IMG/M
3300012914\|Ga0157297_10434345	Not Available	535	Open in IMG/M
3300012915\|Ga0157302_10558121	Not Available	506	Open in IMG/M
3300012958\|Ga0164299_10562457	Not Available	772	Open in IMG/M
3300012958\|Ga0164299_10857167	Not Available	654	Open in IMG/M
3300013306\|Ga0163162_10982060	Not Available	954	Open in IMG/M
3300013308\|Ga0157375_11611931	Not Available	767	Open in IMG/M
3300014326\|Ga0157380_12695142	Not Available	563	Open in IMG/M
3300014326\|Ga0157380_12906576	Not Available	545	Open in IMG/M
3300014968\|Ga0157379_12052498	Not Available	566	Open in IMG/M
3300015077\|Ga0173483_10988229	Not Available	503	Open in IMG/M
3300015374\|Ga0132255_104484210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	592	Open in IMG/M
3300017792\|Ga0163161_10930541	Not Available	738	Open in IMG/M
3300017965\|Ga0190266_10249579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. SRL28	889	Open in IMG/M
3300017965\|Ga0190266_11182849	Not Available	528	Open in IMG/M
3300018481\|Ga0190271_12282709	Not Available	646	Open in IMG/M
3300018481\|Ga0190271_12615196	Not Available	605	Open in IMG/M
3300019362\|Ga0173479_10590445	Not Available	579	Open in IMG/M
3300019767\|Ga0190267_11398898	Not Available	531	Open in IMG/M
3300025901\|Ga0207688_10771265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas morindae	609	Open in IMG/M
3300025925\|Ga0207650_10764370	Not Available	818	Open in IMG/M
3300025926\|Ga0207659_11595649	Not Available	557	Open in IMG/M
3300025933\|Ga0207706_10340293	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300025938\|Ga0207704_10439809	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1038	Open in IMG/M
3300025938\|Ga0207704_11549551	Not Available	569	Open in IMG/M
3300025940\|Ga0207691_10468949	Not Available	1071	Open in IMG/M
3300025961\|Ga0207712_11969388	Not Available	523	Open in IMG/M
3300026023\|Ga0207677_12190884	Not Available	514	Open in IMG/M
3300026095\|Ga0207676_11802980	Not Available	611	Open in IMG/M
3300026121\|Ga0207683_10189611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	1866	Open in IMG/M
3300026142\|Ga0207698_11786834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium ottawaense	630	Open in IMG/M
3300031908\|Ga0310900_10838988	Not Available	746	Open in IMG/M
3300031995\|Ga0307409_100940664	Not Available	880	Open in IMG/M
3300032000\|Ga0310903_10676797	Not Available	556	Open in IMG/M
3300032000\|Ga0310903_10705161	Not Available	546	Open in IMG/M
3300032002\|Ga0307416_100842567	All Organisms → cellular organisms → Bacteria → Proteobacteria	1015	Open in IMG/M
3300032002\|Ga0307416_102446628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum molischianum	621	Open in IMG/M
3300032012\|Ga0310902_10444584	Not Available	835	Open in IMG/M
3300033550\|Ga0247829_11374639	Not Available	584	Open in IMG/M
3300033551\|Ga0247830_10505240	Not Available	951	Open in IMG/M
3300033551\|Ga0247830_11404602	Not Available	558	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.87%
Host-Associated	Host-Associated	40.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.87%
Plants	Host-Associated → Plants	40.13%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.01%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.92%
Loam	Environmental → Terrestrial → Soil → Loam	5.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.82%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	48.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.10%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.27%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	37.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.19%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.83%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.46%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	4.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.82%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.18%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.91%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.27%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.27%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.64%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.64%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.64%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.64%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.64%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_103362252	3300001686	Soil	MKATSITWRRTFPDSKPGTDGVAMFEGRVIGRVRHMTTAPRDPKPWSWSITDPELAGRPGWANTHGEMPSRRQAMARLIERWEELRRIGS*
C688J35102_1190764981	3300002568	Soil	MMQSAVSSRRATSITWRRTFPESAPGTDGVAICEGRVIGRVRYHQLGPRDPVWLWSVTDPELAGRPGWANTHGEMPSRRQ
C688J35102_1196744871	3300002568	Soil	MTDPNISWQRTFPASEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWLWTITDTDLAGLPGWANTNGEMPSRRQAMARLIERWQELRRMGS*
C688J35102_1203947751	3300002568	Soil	TFPDSAPGTDGVAIFEGRVIGRVRHLTDLPDPKPWSWSVTDPDLAGRPGGANTSGEMPSRRQAMARLIERWQELRALTHS*
C688J35102_1206777802	3300002568	Soil	MKASSIVWRRTFPDSKPGTDGVAIFEGRVIGRVRHMTTAPRDPKPWSWSITDPELAGRPGWANTNGEMPSRRQAMARLIERWEEMRRVNAAHRPGS*
Ga0063454_1000503231	3300004081	Soil	MKATSITWRRTFPDSKPGTDGVAMFEGRVIGRVRHMTTAPRDPKPWSWSITDPELAGRPGWANTHGEMPSRRQAMDRLIERWRELRAFTRA*
Ga0063454_1015920241	3300004081	Soil	MKSGIIWRRTSPECAPGTDGVASSGRIIGRVRLLAEGPQHPKPWMWSVTDPDLAGRPGWANMHGEMPSRRQAMDYLVERWQEPRAGEPPF*
Ga0063454_1019674561	3300004081	Soil	MKSHSIIWRRTFPDSAPGTDGVAIFEGRVIGRVGEQGRGEPRTSNGPKPWLWSVTDPELAGRPGWGNASGTMPSRRQAMERLIERWRQLRDVI*
Ga0062589_1016265402	3300004156	Soil	LKASSIVWRRAFPDAAPGTDGVAIFDGRVIGRVRHMTDAPRDPKPWLWSVTDPDLAGRPGWANTSGEMPSRRQAMARLIERWQELRALSLA*
Ga0062590_1030217981	3300004157	Soil	MKATSIIWRRTFPDSAPGTDGVAIFEDRVIGRVRHLTDLPRDPKPWSWSVTDPDLAGRPGWANTSGEMPSRRQAMARLIERWQELRALSLA*
Ga0063356_1024524832	3300004463	Arabidopsis Thaliana Rhizosphere	MRANPEITWRRTFPDSAPGTDGVAIVDGRTIGRVRQDEHRAGKPWVWSITDPELAGKPGWANTTGETTSRRQAMARLIERWQELRRVSAAHRPGS*
Ga0070676_112179501	3300005328	Miscanthus Rhizosphere	MKSGIIWRRTSPECAPGTDGVALFEGRIIGRVRLLAEGLRDPKPWMWSVTDPDLAGRPGWANTSGEMPSRRQAMDR
Ga0070660_1017837292	3300005339	Corn Rhizosphere	MAMTDPNISWERTFPESEPGTDGVAVFDNRVIGRVQYPGPRDPVWSWSITDTDLAGRPGWANTHGETDSRRQAMDCLIERWHELRASSRA*
Ga0070674_1001674952	3300005356	Miscanthus Rhizosphere	MTDPNISWQRTFPASEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWLWTITDTDLAGRPGWANTHGEMPSRRQAMARLIECWEELRRIGS*
Ga0068854_1018522131	3300005578	Corn Rhizosphere	TFPESEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWSWSVTDPTLAGMPGWANTHGEMPSRRQAMARLIEC*
Ga0068852_1011736982	3300005616	Corn Rhizosphere	MTDPNVSWQRTFPASEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWLWTITDTDLAGLPGWANTNGEMPSRRQAMARLIERWQELRRMGS*
Ga0068866_114377211	3300005718	Miscanthus Rhizosphere	MKATSITWRRTFPDSAPGTDSVAIFEGRVIGRVRLLADVPRDPKPWSWSVTDPTLAGRPGWANTHGEMPSRRQAMDRLIELRADEPPF*
Ga0068870_112175572	3300005840	Miscanthus Rhizosphere	MAMIDPNISWERTFPESEPGTDGVAVFDNRVIGRVQYPGPRDPVWSWSITDTDLAGRPGWANTHGEADSRRQAMDRLIERWQELRRMNPA*
Ga0068860_1026242871	3300005843	Switchgrass Rhizosphere	MTDPNISWQRTFPASEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWSWSVTDPDLAGRPGWANTSGEMPSRRQAMDRLIERWQELRA
Ga0066652_1001506301	3300006046	Soil	MEFFNSLLAPLKALSIIWRRTFPDSAPGTDGVAIFDGRVIGRVRLTELPHEGAKWSWSVTDPELAGRPGWANTNGEMPSRRQAMDRLIERWHELRAF
Ga0075422_104689471	3300006196	Populus Rhizosphere	MAMTDPNISWQRTFPESEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWLWTITDPELAGRPGWANTSGEMPSRRQAMARLIERWQELRASSCTAARGGPFWRAG*
Ga0075428_1002433713	3300006844	Populus Rhizosphere	MKDPSITWRRTFPDSAPGSDGVAIFEGRVIGRVQHMTNLPSDPKWSWSVTDPELAGRPGWANTSGEMPSRGQAMDRVIERWQELRAFSRA*
Ga0075428_1005834242	3300006844	Populus Rhizosphere	MKATSVTWRRTFPDSAPGTDGVAIFEGRVIGRVRQDEHCAGKPWLWSVTDPELAGKPGWANTTGETTSRRQAMARLLERWQELRRVSAAHRPGS*
Ga0075421_1010521623	3300006845	Populus Rhizosphere	MKATSVTWRRTFPDSAPGTDGVAIFEGRVIGRVRQDEHCAGKPWLWSVTDPELAGKPGWANTTGETTSRRQAMARL
Ga0075421_1018095892	3300006845	Populus Rhizosphere	MKPGAITWRRTFPDSAPGTDGVAIVDGRTIGRVRQDEHRAGKPWLWAVTDPELAGKPGWANTTGETTSR
Ga0075430_1015273162	3300006846	Populus Rhizosphere	MKDPSITWRRTFPDSAPGSDGVAIFEGRVIGRVQHMTNLPSDPKWSWSVTDPELAGRPGWANTSGEMPSRRQAMDRVIERWQELRAFSRA*
Ga0075429_1008426211	3300006880	Populus Rhizosphere	MKATSVTWRRTFPDSAPGTDGVAIFEGRVIGRVRQDEHCAGKPWLWSVTDPELAGKPGWANTTGETTSRRQAMARLIERWQ
Ga0068865_1013424911	3300006881	Miscanthus Rhizosphere	MKGTSITWRRTFPDSAPGTDGVALFEGRIIGRVRLLAEGPQDLKPWSWSVTDPDLARRPGHAAGVLCATLWAHPGL*
Ga0075424_1016956881	3300006904	Populus Rhizosphere	MAMTDPNISWQRTFPASEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWLWTITDTDLAGLPGWANTNGEMPSRRQAMARLIERWQELRRMGS*
Ga0111539_107948012	3300009094	Populus Rhizosphere	MRANPEITWRRTFPDSAPGTDGLAIVDGRTIGRVRQDEHRAGKPWVWSITDPELAGKPGWANTTGETTSRRQAMARLIERWQELRRVSAAHRPGS*
Ga0111539_111240004	3300009094	Populus Rhizosphere	MKATSVTWRRTFPDSAPGTDGVAIFEGRVIGRVRQDEHCAGKPWLWSVTDPELAGKPGWANTTEETTSRRQAMARLIERWQELRAFSRA*
Ga0111539_127541012	3300009094	Populus Rhizosphere	MAMTDPNISWQRTFPASEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWLWTITDTDLAGLPGWANTNGEMLSRRQAMARLIERWQELRRMGS*
Ga0111539_127689092	3300009094	Populus Rhizosphere	GARDLSNKANRPLEMMQSAVSSRRATSITWRRTFPDSAPGTDGVAICEGRVIGRVRYHQLGPRDPVWLWSVTDPELAGRPGWANTHGEMPSRRQAMDRLIERWHELRASSRA*
Ga0075418_122460271	3300009100	Populus Rhizosphere	MRANPEITWRRTFPDSAPGTDGLAIVDGRTIGRVRQDEHRAGKPWVWSITDPELAGKPGWANTT
Ga0114129_124780551	3300009147	Populus Rhizosphere	MRANPEITWRRTFPDSAPGTDGLAIVDGRTIGRVRQDEHRAGKPWVWSITDPELAGKPGWANTTGETTSRRQAMARLI
Ga0111538_113870871	3300009156	Populus Rhizosphere	MAMTDFNISWQRTFPECEPGTDGVALFEGRIIGRIRHDRFSPRDPVWAWSVTDPELAGRPGWSNTQGEMPSRRQAMDRLIERWQEMRRMNP
Ga0111538_130080152	3300009156	Populus Rhizosphere	MKATSITWRRTFPDSAPGTDGVAICEGRVIGRVRYHQLGPRDPVWLWSVTDPELAGRPGWADTHGEMPSRRQAMARLIERWQELRAFSRA*
Ga0111538_131643801	3300009156	Populus Rhizosphere	MAMTDPNISWQRTFPASEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWLWTITDTDLAALPGWANTNGEMPSRRQAMDRLIERWEELRRIGS*
Ga0105249_118343781	3300009553	Switchgrass Rhizosphere	MTFGTLPQVQVERLEAMKPGAITWRRTFPDSEPGTDGVAIVDGRTIGRVRQDEHRAGKPWLWAATDPEHAGKPGWANTTGETTSRRQAMARLIERWQELRRVSAAHSSGS*
Ga0105249_132542051	3300009553	Switchgrass Rhizosphere	MKATSVTWRRTFPDSAPGTDGVAIFEGRVIGRVRLTNLPRDPKPWLWTVTDPELAGRPGWANTHGEMPSRRQAMARLIERWQELRRLR*
Ga0126307_100278042	3300009789	Serpentine Soil	MKATSITWRRTFPDSAPGTDGVAIFEGRVIGRVRHLTDLPRDPKPWSWSVTDPDLAGRPGWANTSGEMPSRRQAMARLIERWQELRRIGS*
Ga0126307_102287702	3300009789	Serpentine Soil	MRANPEITWRRTFPDSAPGTDGVAIVDGRTIGRVRQDEHRAGKPWVWSITDPELAGKPGWANTTGETTSRRQAMARLIERWQELRRVSAAHRPGSSPSPSSRR
Ga0126307_103676423	3300009789	Serpentine Soil	MKSGITWRRTFPECAPGTDGVALFEGRVIGRVRLLAELPRDPKPWMWRVTDPTLAGQPGWADTQGEVPSRRQAMDRLIERWQELRRLKPT*
Ga0126307_104138871	3300009789	Serpentine Soil	MKDPSITWRRTFPDSAPGTDGVAIFEGRVIGRVRLLAEGPRDPKPWSWSITDPELAGRPGWANTSGEMPSRRQAMARLIERWQELRRLNPA*
Ga0126307_105532631	3300009789	Serpentine Soil	VYQYGYASPFSTREGNQTSGLEVCACMAMTDPNISWQRTFPESEPGTDGLAVFEGRIIGRIMHMTNLPRDPKPWTWSITDPELAGRPGWATTHGEMPSRRQAM
Ga0126307_105744551	3300009789	Serpentine Soil	MKHRSITWRRTFPESEPGTDGVAVFEGRVIGRVRLLAELPQPWMWSVTDPTLAGRADTHGEMPSRRQAMDRLIERWQEL
Ga0126307_108502552	3300009789	Serpentine Soil	FPESEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWSWSVTDPELAGRPGWANTHGEMPSRRQAMARLVERWLELRAFRA*
Ga0126307_108849231	3300009789	Serpentine Soil	RTFPESEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWSWSVTDPTLAGGPGWTDTHGEMPSRRKAMDRLIERWLELRAFSRA*
Ga0126307_111782442	3300009789	Serpentine Soil	MKPGEITWRRTFPDSAPGTDGVAIVDGRTIGRVRQDEHRAGRPWLWAVTDPELAGKPGWANTTGEATSRRQA
Ga0126307_112254222	3300009789	Serpentine Soil	MNDPRISWRRTFPEGEPGTDGVAMFEGRIIGRIMHMTNLPRDPKPWSWSVTDPDLAGRPGWSNTHGETDSRRQAMERLIERWQELRRLTGGLGPDEARC*
Ga0126307_117099851	3300009789	Serpentine Soil	RTFPDSAPGTDGVAIFEDRVIDRVRHLTDLPRDPTPWSRSVTDPELAGRPGWADTHGEMPSRQQAMARLIERWLELRAFRA*
Ga0126313_100581556	3300009840	Serpentine Soil	FPASEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWLWTITDTDLAGLPGWANTNGEMPSRRQAMARLIERWQELRRMGS*
Ga0126313_101921081	3300009840	Serpentine Soil	MAMTDPNISWQRTFPDSQRGTDGVAVFEGRIIGRIMHMTNLPRDPWMWSVTDPELAGRPGWADTNGEMPSRRRLWSA*
Ga0126313_101986733	3300009840	Serpentine Soil	MAMTDPNISWQRTFPELEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWSWSVTDPELAWRRGWANTSGEMPSRRQAMARLIERWEELRRIGS*
Ga0126313_103212732	3300009840	Serpentine Soil	MKATSITWQRTFPDSARGTDGVAIFAGRVIGRVRHMTNAPRDPKPWSWSITDPELAGRPGWANTHGEMPSRRQAMDRLIERWQELRRSALAPRLMPGSRLPNGALDSAL*
Ga0126313_103559622	3300009840	Serpentine Soil	MTDPSITWRRTFPDSAPGTDGVAIFEGRVIGRVQHMTNAPRDPKPWTWSVTDPELAGRPGWGNTHGEMPSRRQAMARLIERWQELRASRRA*
Ga0126313_113453141	3300009840	Serpentine Soil	MKATSIIWRRTFPDSAPGTDGVAIFEGHVIGRVRLTELPHGAKWMWTITDPDLAGRPGWANTHGEMPSRRQAMERLIERWQELRRLTSH*
Ga0126305_106502364	3300010036	Serpentine Soil	WRRTFPDSAPGTDGVAIFEGRVIGRVRLTELPHGAKWMWTVTDPDLAGRPGWVDTNGEMPSRRQAMARLIERWLELRALSRA*
Ga0126305_109314031	3300010036	Serpentine Soil	MKPGEITWRRTFPDSAPGTDGVAIVDGRTIGRVRQDEHRAGGPWLWAVTDPELAGKPGWANTTGEATSRRQAMARLIERWQELRRVSAAHRPGS*
Ga0126304_101284661	3300010037	Serpentine Soil	MKATSITWRRTLPDSAPGTDGVALFEGRVIGRVRLLAEGPQDPEPWLWSGTDPDLAGLPGWANTSGEMPSRRQAMARLIERWQELRRVSAAHRPGS*
Ga0126304_101655251	3300010037	Serpentine Soil	EHASGRAAYCGPAGSRAIKSLTAKKATSITWRRTFPDSAPGTDGVAIFEGRVIGRVRHMTNLPGDPKWSWSVTDPELAGRPGWANTSGEMPSRRQAMDRLIERWQELRAFSRA*
Ga0126304_102122333	3300010037	Serpentine Soil	EASALQMKDPSITWRRTFPDSAPGTDGVAIFEGRVIGRVRLLAEGPRDPKPWSWSITDPELAGRPGWANTSGEMPSRRQAMARLIERWQELRRLNPA*
Ga0126304_102419423	3300010037	Serpentine Soil	MKSGITWRRTFPECAPGTDGVALFEGRVIGRVRLLAELPRDPKPWMWSVTDPTLAGQPGWADTQGEVPSRRQAMDRLIERWQELRRLKRT*
Ga0126304_108299513	3300010037	Serpentine Soil	MAMTDPNISWQRTFPESEPGTDGLAVFEGRIIGRIMHMTNLPRDPKPWTWSITDPELAGRPGWATTHGEMPSRRQAMARLIERWLELRALSRA*
Ga0126315_101231742	3300010038	Serpentine Soil	MKATSVTWRRTFPDSAPGTDGVAIFEGRVIGRVRQDEHCAGKPWLWSVTDPELAGKLGWANTTGETTSRRQAMARLLERWQELRRVSAAHRPGS*
Ga0126315_105216471	3300010038	Serpentine Soil	MGIKGDPAITWRRTFPECEPGTDGDAVFEGRIIGRIMHMTNAPRDPKPWTWSVTDPELAGRPGWADTNGEMPSRRQAMARLIERWQELRPIKPI*
Ga0126308_100178941	3300010040	Serpentine Soil	KEHASGRAAYCGPAGSRAIKATAMKATSITWRRTFPDSAPGTDGVAIFEGRVIGRVRHLTDLPRDPKPWSWSVTDPDLAGRPGWANTSGEMPSRRQAMARLIERWQELRRIGS*
Ga0126308_103743252	3300010040	Serpentine Soil	MRANPEITWRRTFPDSAPGTDGVAIVDGRTIGRVRQDEHRAGKPWVWSVTDPDLAGGPGWANTTGETTSRRQAMARLIERWQELRRVSAAQRSGS*
Ga0126308_104505404	3300010040	Serpentine Soil	CAGMAMTDPNISWQRTFPESEPGTDGVAMFEGRIIGRIMHMTNLPRDPKPWLWTITDTDLAGLPGWANTNGEMPSRRQAMARLIERWQELRRMGS*
Ga0126308_105474731	3300010040	Serpentine Soil	TAMKATSVTWRRTFPDSAPGTDGVAIFEGRVIGRVRQDEHCAGKPWLWSVTDPELAGRPGWADTHGEMPSRRQAIDRLIERWHELRAFSRA*
Ga0126308_106395501	3300010040	Serpentine Soil	MTDPSITWRRTFPDSAPVTDGVAIFAGRVIGRVRLTELPHDGAKWAWSVTDPELAGRPGWANTHGEMPSRRQAMARLIERWHELRRVTARS*
Ga0126308_108197281	3300010040	Serpentine Soil	MKATSVTWRRTFPDSAPGTDGVAIFEGRVIGRVRQDEHCAGKPWLWSVTDPELAGKPGWANTTGETTSRRQAMARLIERWQELRRVSAAHR
Ga0126312_100587862	3300010041	Serpentine Soil	MKSGITWRRTFPECAPGTDGVALFEGRVIGRVRLLAELPRDPKPWMWRVTDPTVAGQPGWADTQGEVPSRRQAMDRLIERYQATSGTGPFATFRTGPLSSR*
Ga0126312_102264184	3300010041	Serpentine Soil	MQSAVSSRRATSITWRRTFPESAPGTDGVAICEGRVIGRVRYHQLGPRDPVWLWSVTDPELAGLPGWANTDGEMPSRRQAMDRLIERWHELRASSRA*
Ga0126312_109902233	3300010041	Serpentine Soil	MKGDPAITWRRTFPECEPGTDGDAVFEGRIIGRIMHMTNAPRDPKPWTWSVTDPELAGRPGWADTHGEMPSRRQAMDRLIERWHELRAFSPA*
Ga0126314_100649131	3300010042	Serpentine Soil	MAMTDPNISWQRTFPDSQRGTDGVAVFEGRIIGRIMHMTNLPRDPWMWSVTDPELAGRPGWADTNGEMPSRRQAMARLIERWHELRAFRRA*
Ga0126314_103652423	3300010042	Serpentine Soil	MKATSITWRRTFPDSAPGTDGVAIFEGRVIGRVRHLTDLPRDPKPWSWSVTDPDLAGRPGWANTHGEMPSRRQAMARLIE
Ga0126314_114883381	3300010042	Serpentine Soil	TFPDSAPGTDGVAIVDGRTIGRVRQDEHRAGKPWLWAVTDPELAGKPGWANTTGETTSRRQAMARLIERWQELRRVSAAHRPGS*
Ga0126310_100554606	3300010044	Serpentine Soil	MNDPEITWRRTFPDSEPGTDGVALFEGRIIGRVRLLEELPDPKPWMWSVTDPDLAGVPGHTHGEVLSRRQAMERLIERWQELRRLR*
Ga0126310_101935381	3300010044	Serpentine Soil	MKASSIVWRRTFPDSKPGTDGVAIFEGRVIGRVRHMTTAPRDPKPWSWSITDPELAGRPGWANTNGEMPSRRQAMA
Ga0126310_101935382	3300010044	Serpentine Soil	MAMTDPNISWQRTFPELEPGTDGVAVFEGRIIGRIMHTTNLPRDPKPWSWSVTDPELAWRRGWANTSGEMPSRRQAMARLIERWEELRRIGS*
Ga0126310_105726582	3300010044	Serpentine Soil	MKDPSITWRRTFPDSAPGTDGVAIFEGRVIGRVRQDEHCAGKPWLWSVTDPELAGRPGWADTHGEMPSRRQAIDRLIERWHELRAFSRA*
Ga0126310_106502191	3300010044	Serpentine Soil	MAMTDTNISWQRTFPESDPGTDGVAVFDDRSIGRIMHMTTLPRDPKPWSWSVTDPDLAGRPGWANTSGEMPSRRQAMASGEHRRSPYRAEEEDQHG
Ga0126310_107680371	3300010044	Serpentine Soil	MTDPSITWRRTFPDSAPGTDGVAIFEGRVIGRVQHMTNAPRDPKPWTWSVTDPELAGRPGWATTHGEMPSRRQAMARLIERWLELRALSRA*
Ga0126310_109822181	3300010044	Serpentine Soil	ISWQRTFPESEPGTDGVAVFEGRIIGRIMHITNLPRDPKPWSWSVTDPTLAGLPGWANTHGEMPSRRQAMARLIERWQELRHANASHRLGS*
Ga0126310_113358411	3300010044	Serpentine Soil	MKSTSIIWRRSFPECEPGTDGVALFEGRIIGRGRLMAELPRDPKPWSWSVTDPELAGQPGWANTQGEMPSRRQAMARLIERWHELRRVSAAHSRGS*
Ga0126311_100300481	3300010045	Serpentine Soil	QTSGLKVCAGMAMTDPNISWQRTFPASEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWLWTITDTDLAGLPGWANTNGEMPSRRQAMARLIERWQELRRMGS*
Ga0126311_103097103	3300010045	Serpentine Soil	MQSAVSSRRATSITWRRTFPDSAPGTDGVAICEGRVIGRVRYHQLGPRDPVWLWSVTDPELAGRPGWANTSGEMPTRRQAMARLIDRWLE
Ga0126311_104876311	3300010045	Serpentine Soil	QRTFPESEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWSWSVTDPTLAGMPGWANAHGEMPSRRQAMAGLIERWEELRRIGS*
Ga0126311_105786241	3300010045	Serpentine Soil	MKATSITWRRTFPDSAPGTDGVAIFEGRVIGRVRHDQLGPRGPRWLWSITDVDIAGRPGWANTHGEAPSRRQAMDRLIERWRELRAFSRA*
Ga0126311_105905331	3300010045	Serpentine Soil	RTFPELEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWSWSVTDPELAWRRGWANTSGEMPSRRQAMARLIERWEELRRIGS*
Ga0126311_106203852	3300010045	Serpentine Soil	MKATSIIWRRTFPDSAPGTDGVAIFEGHVIGRVRLTELPHGAKWMWTVTDPDLAGRPGWANTHGEMPSRRQAMERLIERWQELRRLDST*
Ga0126306_100243274	3300010166	Serpentine Soil	MRANPEITWRRTFPDSAPGTDGVAILDGRTIGRVRQDEHRAGKPWVWSVTDPELAGGPGWANTQGETTSRRQAMERLIERWQELRRIKPI*
Ga0126306_101147311	3300010166	Serpentine Soil	SITWRRTFPDSAPGTDGVAIFEGRVIGRVRHMTNLPGDPKWSWSVTDPELAGRPGWANTSGEMPSRRQAMDRLIERWQELRAFSRA*
Ga0126306_103528911	3300010166	Serpentine Soil	VYQYGYASPFYTREGNQTSGLEVCACMAMTDPNISWQRTFPESEPGTDGLAVFEGRIIGRIMHMTNLPRDPKPWTWSITDPELAGRPGWADTNGEMPSRRQAMARLIERWLELRALSRA*
Ga0126306_105129502	3300010166	Serpentine Soil	VKATSIIWRRTFPECEPGTDGLAVRLMTELPHDPKPWMWSVTDPDLAGRPGWSDTHGETGSRRQAMARVIERWQELRTASHGRRAG*
Ga0126306_107234751	3300010166	Serpentine Soil	SAPGTDGVAIFEGRVIGRVQHMTNLPGDPKWSWSVTDPELAGRPGRADTNGEMPSRRQAMARLIERWQELRASSRF*
Ga0126306_109153922	3300010166	Serpentine Soil	MKATSIIWRRTFPDSAPGTDGVAIFEGRIMGRVRLMAELPRDPKPWSWSVTDPELAGGPGWANTQGEMPSRRQAMARLIERWHELRRVTAAHSPGS*
Ga0126306_115461531	3300010166	Serpentine Soil	MKPGEITWRRTFPDSAPGTDGVAIVDGRTIGRVRQDEHRAGKPWLWAVTDPELAGKPGWANTTGETTSRQELRR
Ga0134123_120514341	3300010403	Terrestrial Soil	QTSGLEVCAGMAMTDPNISWQRTFPEPEPGTDGEGRIIGRIMHMTNLPRDPKPWMWSVTDTELAGRPGWANTSGEMPSRRQAMDRLIERWQELRAFRRA*
Ga0150985_1003335151	3300012212	Avena Fatua Rhizosphere	MKATSIIWRRTFPDSAPGTDGVALFEGRIIGRVRLMAELPRDPKPWSWSVTDPELAGGPGWANTQGETTSRRQAMASLIERWQALRRVTAAEAGFLIFTQLRHRPLL*
Ga0150985_1126084511	3300012212	Avena Fatua Rhizosphere	QGNQTSGLEVCAGMAMTDPNISWQRTFPESEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWSWSVTDPTLAGMPGWANTHGEMPSRRQAMARLIECWEELRRIGS*
Ga0150985_1161740032	3300012212	Avena Fatua Rhizosphere	LNDPSITWRRTFPDSPPGTDGVAMCEGRVIGRVREQSRGEPRAGDGPKPWLWSVDRTWSSRDGQGWGHASGAMPSRRQAMTRLIERWHELRAAISSAGDL*
Ga0150985_1176072761	3300012212	Avena Fatua Rhizosphere	MDDPSITWRRAFPDSEPGTDGVALFGGRVIGRVREQGRGEPHASNDAKPWLWSVTDPELAGRPGWSNTHGEVPSRREAMNRLIERWQELRAITQGVP*
Ga0150985_1213035021	3300012212	Avena Fatua Rhizosphere	AMKSGSIIRRRTFPDSAPGTDGVAIFEGRIIGRVREQGRGEPRASNGPKPWLWSVTDVELAGRPGWGHASGAMPSRRQAMERLIERWRELRDVIKGASPLARDRKALASGSRTDDPA*
Ga0150984_1064539542	3300012469	Avena Fatua Rhizosphere	MKSGITWRRTFPESAPGTDGVALFEGRIIGRVRLIAERSQEPKSWLWSVTDPDLAGRPGWANTSGEMPSRRQAMARLIERWQELRASSRA*
Ga0150984_1066707501	3300012469	Avena Fatua Rhizosphere	LKSGSIIWRRTFPDSEPGTDGVAIFEGRVIGRVREQGRGEPRTSNGPKPWLWSVTDPELAGRPGWGHASGTMPSRRQAMARLIERWQELRAITQGAP*
Ga0150984_1068302921	3300012469	Avena Fatua Rhizosphere	MKSDSIIWRRTFPDSAPGTDGVAIFEGRIIGRVREQGRGEPRASNGPKPWLWSVTDVELAGRPGWGHASGAMPSRRQAMERLIERWRQLRDVI*
Ga0150984_1093161875	3300012469	Avena Fatua Rhizosphere	GITWWRTFPECEPGTDGVALFEGRVIGRVRHMTNAPPDTKPWMWSVTEPELAGRPGWPDTHGEMPSRRQAMARLIERWQELRRMGS*
Ga0150984_1108294553	3300012469	Avena Fatua Rhizosphere	MAMTDPNISWQRTFPASEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWSWSVTDPELAGRPGWANTNGEMPSRRQAIARLIRQELRRIGS*
Ga0150984_1138368661	3300012469	Avena Fatua Rhizosphere	MAMTDPNISWERTFPESEPGTDGVAVFDNRVIGRVQYPGPRDPVWSWSITDTDLAGRPGWANTHGETDSRRQAMDCLIERWHELRAFRA*
Ga0150984_1181148252	3300012469	Avena Fatua Rhizosphere	MKPGSIAWRRTFPDSPPGTDGVAIFEGRVIGRVREQGRGEPRDRDGPKPWLWSVTDVELAGRPGWGNASGTMPSRRQAMDRLIERWQELRRAVGGS*
Ga0157303_101522681	3300012896	Soil	MAMTDPNISWQRTFPESEPGTDGVAVFEGRIIGRIMHMTNLPRDRKPWSWSVTDPDLAGRPGWANTSGEMPSRRQAMARLIERWQELRAFSRA*
Ga0157286_101706011	3300012908	Soil	MAMTDPNISWQRTFPESEPGTDGFAVFEGRIIGRIMHMTNLPRDPKPWSWSVTDPDLAGRPGWANTSGETPSRRQAMDRLIERWQELRAFSRA*
Ga0157286_101756981	3300012908	Soil	MQSAVSSRKATSITWRRTFPDSKPGTDGVAIFEGRVIGRVRHMTDAPRDPKPWLWTITDPELAGRPGWANTSGEMPSRRQAMARLIERWEELRRFGS*
Ga0157301_103314911	3300012911	Soil	NQGNQTSGLKVCAGMAMTDPNISWQGTFPASEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWLWTITDTDLAGLPGWANTNGEMPSRRQAMARLIERWQELRASSRA*
Ga0157306_102712381	3300012912	Soil	MAMTDPSITWRRTFPDSKPGTDGVAIFEGRVIGRVRHLTDLPRDPKPWSWSVTDPDLAGRPGWANTHGEMPSRRQAMARLIERWEELRRIGS*
Ga0157297_104343452	3300012914	Soil	PDSAPGTDGVAIFDGRVIGRVQHMTNRPGDPKPWTWTITDSDLAGPPGWANTNGEMPSRRQAMARLIERWQELRAFSRA*
Ga0157302_105581211	3300012915	Soil	MKATSITWRRTFPDSAPGTDGVAIFDGRVIGRVRHMTDAPRDPKPWSWSVTDPDLAGRPGWANTSGEMPSRRQAMARLTERWQELRASRRA*
Ga0164299_105624572	3300012958	Soil	AMTDPNISWQRTFPESEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWSWSVTDPTLAGMPGWANTHGEMPSRRQAMARLIEC*
Ga0164299_108571673	3300012958	Soil	IKSLPRIQATAMKGTSITWRRTFPDSAPGTDGVAIFEGRVIGRVRHMTTAPRDPKPWSWSITDPELAGRPGWANTSGEMPSRRQAMDRLVERWQELRAGEPPF*
Ga0163162_109820601	3300013306	Switchgrass Rhizosphere	MAMTDPNISWQRTFPASEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWSWSVTDPTLAGMPGLANTHGEMPSRRQAMARLIEC*
Ga0157375_116119312	3300013308	Miscanthus Rhizosphere	MAMTDPNISWQRTFPESEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWSWSVTDPTLAGMPGWANTHGEMPSRRQAMARLIERWQELRASSPA*
Ga0157380_126951421	3300014326	Switchgrass Rhizosphere	MNDDPDITWRRTFPECEPGTDGVAIFEGRVIGRVRLLEELPDPKPWMWSVTDPTLAGVPGHTHGEMPSRRQAMDRLIERWHELRAFRRA*
Ga0157380_129065761	3300014326	Switchgrass Rhizosphere	MKATSVIWRRTFPDSAPGTDGVAMFEGRVIGRIMHMTNLPRDPKRWSWSVTDPTLAGRPGWANTHGEMPSRRQAMARLIERWQGL
Ga0157379_120524981	3300014968	Switchgrass Rhizosphere	MAMTDPNISWQRTFPASEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWLWTITDTDLAGLPGWANTNGEMPSRRQAMARLIERWQ
Ga0173483_109882291	3300015077	Soil	MKSGIIWRRTSPECAPGTDGVASSGRIIGRVRLLAEGPQHPKPWMWSVTDPDLAGQPGCANTHGEMPSRRQAMDRLVERWQELRAGEPPF*
Ga0132255_1044842102	3300015374	Arabidopsis Rhizosphere	AVPRNQGNQTYGLKVCAGMAKTDPNISWQRTFPASEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWLWTITDTDLAALPGWANTNGEMPSRRQAMARLIERWQELRRMGS*
Ga0163161_109305411	3300017792	Switchgrass Rhizosphere	MTDPNISWQRTFPDNQPGIDGVAVFEGRIIGSIMHMTNLPRDPKPWSWSVTDPTLAGMAGWANTSGETPSRRQAMARLIERWEELRAFTRT
Ga0190266_102495794	3300017965	Soil	MEDDDRNITWRRTFPESEPGTDGLAVFEGRIIGRIMHMTNLPRDPKRWSWSVTDPELAGRPGWADTHGEMPSRRQAMARLIQRWEELRRVTAADRPGS
Ga0190266_111828491	3300017965	Soil	RAAYCGPAGSRAIKSLTAMKATSVTWRRTFPDSAPGTDGVALFEGRIIGRARLLAEGPQDLKPWSWSVTDPDLAGRSGWANTSGEMPSRRQAMARLIERWEELRRIGS
Ga0190271_122827091	3300018481	Soil	MTDPNISWQRTFPESEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWSWSVTDPTLAGMPGWANTHGEMPSRRQAMARLIERWEELRRIGS
Ga0190271_126151963	3300018481	Soil	MKDPSITWRRTFPDSAPGTDGVAIFEGRIIGRVRLLAEGPQDPKPWSWSVTDPELAGRPGWADTNGEMPSRRQAMARLIERWLELRPFSRA
Ga0173479_105904451	3300019362	Soil	RTFPDSAPGTDGVAIFEGRVIGRVQHMTNLPRDPKPWLWSVTDPELAGQPGWAHTHGELPSRRQAMARLIERWHELRAFSRA
Ga0190267_113988982	3300019767	Soil	MNDPDIIWQRTFPDSAPGTDGVALFEGRVIGRVQLLANAPRDPKPWSWSVTDPELAGRPGWANTTGEMPSRRQAMARLIERWEELRRVSAAS
Ga0207688_107712652	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MTDPNVSWQRTFPESEPGTDGVAVFESRVIGRIMHMTNLPRDPKPWSWSVTDPELAGRPGWANTNGEMPSRRQAMARLIERWQELRRIG
Ga0207650_107643702	3300025925	Switchgrass Rhizosphere	MAMTDPNISWQRTFPASEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWLWTITDTDLAGLPGWANTNGEMPSRRQAMARLIERWQELRRMGS
Ga0207659_115956491	3300025926	Miscanthus Rhizosphere	MTDPNVSWQRTFPESEPGTDGVAVFESRVIGRIMHMTNLPRDPKPWSWSVTDPDLAGRPGWANTSGEMPSRRQAMDRLIERWQELREEPRRSPP
Ga0207706_103402931	3300025933	Corn Rhizosphere	MKATSVTWRRTFPDSAPGTDGVAIFEGRVIGRVRHLTDLPRDPKPWSWSVTDPDLAGRPGWANTNGEMPSRRQAM
Ga0207704_104398091	3300025938	Miscanthus Rhizosphere	MTDPNISWQRTFPESEPGTDGVAIFDGQVIGRVRLTELPHDGAKWAWSVTDPDLAGRLGWADTHGEMPSRRQAMDRLIERWQELRRLR
Ga0207704_115495511	3300025938	Miscanthus Rhizosphere	MKGTSITWRRTFPDSAPGTDGVALFEGRIIGRVRLLAEGPQDLKPWSWSVTDPDLARRPGHAAGVLCATLWAHPGL
Ga0207691_104689491	3300025940	Miscanthus Rhizosphere	MTDPNISWQRTFPASEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWSWSVTDPTLAGRPGWANTHGEMPSRRQAMAGLIERWEELRRIGS
Ga0207712_119693881	3300025961	Switchgrass Rhizosphere	PTSPGNAPSRCPSPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWSWSVTDPDLAGRPGWANTSGEMPSRRQAMDRLIERWQELRAFRRA
Ga0207677_121908841	3300026023	Miscanthus Rhizosphere	MKDDPDITWQRTFPESGPGTDGVAVFEARIIGRMRHDQFSPRDPKPWLWTVTDPELAGRPGWSDAHGEMPSRRHPIARLIERWQELRRITAARGKVDPLLAPTRVSRP
Ga0207676_118029802	3300026095	Switchgrass Rhizosphere	MTDPNISWQRTFPESEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWLWSITDPDLSGRLANTNGEMPSRRQAMDRLVERWQELRAGEPPF
Ga0207683_101896113	3300026121	Miscanthus Rhizosphere	MAMTDPNISWQRTFPEPEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWLWTITDTDLAGLPGWANRNGEMPSRRQAMARLIERWQELRRMGS
Ga0207698_117868342	3300026142	Corn Rhizosphere	ERTFPESEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWSWSVTDPTLAGMPGWANTHGEMPSRRQAMARLIERWQELRRMGS
Ga0310900_108389882	3300031908	Soil	MKATSITWRRTFPDSAPGTDGVAIFEGRVIGRVRHLTDLPRDPKPWSWSVTDPDLAGRPGWANTSGEMPSRRQAMARLIERWQELRRVTARS
Ga0307409_1009406642	3300031995	Rhizosphere	MAMTDTNISWQRTFPESEPGTDGVAVFEDRIIGRIMHMTNLPRDPKPWSWSVTDPDLAGRPGWADTHGEMPSRRQAMARRIERWHELRAFRQS
Ga0310903_106767972	3300032000	Soil	MKATSITWRRTFPDSAPGTDGVAIFEGRVIGRVRHLTDLPRDPKPWSWSVTDPDLAGRPGWANTNGEMPSRRQAMDRLIERWHELRAFSRA
Ga0310903_107051613	3300032000	Soil	MKDPSITWRRTFPDSAPGSDGVAIFEGRVIGRVQHMTKLPGDPKWSWSVTDPELAGRPGWANTSGEMPSRRQAMDRVIERWQELRAFS
Ga0307416_1008425671	3300032002	Rhizosphere	QGNQTSGLEVCAGMAMTDTNISWQRTFPESEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWTWSVTDPTLAGLPGWANTHGEMPSRRQAMARLIERWQELRRANAAHRPGS
Ga0307416_1024466281	3300032002	Rhizosphere	KDPSIIWRRTFPDSAPGTDGVAIFEGRVIGRVQHMTNLPRPKPWSWSVTDPKLAGRPGWANTNGEMPSRRQAIDRLIERWHELRASSRASGTS
Ga0310902_104445841	3300032012	Soil	MTDPNITWRRTFPDSAPGTDGVAIFVGRVIGRVRLTELPHDGAKWSWSVTDPELAGRPGWANTNGEAPSRRQAMARLIERWQELRRVTARS
Ga0247829_113746391	3300033550	Soil	LPIKSLTRIQATAMKATSVTWRRTFPDSAPGTDGVAIFEGRVIGRVRHLTDLPRDPKPWSWSVTDPDLAGRPGWANTSGEMPSRRQAMARLIERWHELRSLQAAPGRQG
Ga0247830_105052401	3300033551	Soil	MKDPSITWRRTFPDSAPGSDGVAIFEGRVIGRVQHMTNLPSDPKWSWSVTDPELAGRPGWANTSGEMPSRRQAMDRVIERWQELRAFSRA
Ga0247830_114046021	3300033551	Soil	MAITDPNISWQRTFPEPEPGTDGVAVFEGRIIGRIMHMTNLPRDPKPWMWSVTDPELAGRPGWANTHGEMPSRRQAMARLIERWEELGRIGS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F042962

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences