Metagenome / Metatranscriptome Family F042912

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042912
Family Type	Metagenome / Metatranscriptome
Number of Sequences	157
Average Sequence Length	54 residues
Representative Sequence	MKWTPDLIIALVLIVGCLGLIFTGIDGEVKSILTLAAGWAFGSQYQARRVSKGG
Number of Associated Samples	47
Number of Associated Scaffolds	157

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.26 %
% of genes near scaffold ends (potentially truncated)	14.65 %
% of genes from short scaffolds (< 2000 bps)	68.79 %
Associated GOLD sequencing projects	42
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (85.350 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface (26.752 % of family members)
Environment Ontology (ENVO)	Unclassified (28.662 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (50.318 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 53.66% β-sheet: 0.00% Coil/Unstructured: 46.34%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 157 Family Scaffolds
PF02195	ParBc	4.46
PF02697	VAPB_antitox	3.18
PF13385	Laminin_G_3	1.27
PF01870	Hjc	0.64
PF13360	PQQ_2	0.64
PF00437	T2SSE	0.64

COG ID	Name	Functional Category	% Frequency in 157 Family Scaffolds
COG1753	Predicted antitoxin, CopG family	Defense mechanisms [V]	3.18
COG1591	Holliday junction resolvase Hjc, archaeal type	Replication, recombination and repair [L]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.35 %
All Organisms	root	All Organisms	14.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.35 %
cellular organisms	root	All Organisms → cellular organisms	10.19 %
Viruses	superkingdom	All Organisms → Viruses	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.35 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.19 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.35 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.46 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.64 %
Elusimicrobia	phylum	All Organisms → cellular organisms → Bacteria → Elusimicrobia	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.35 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.46 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.27 %
Elusimicrobia	class	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	0.64 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.35 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	4.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.46 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	1.27 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.91 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.64 %
Elusimicrobia	class	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.46 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	2.55 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	1.27 %
Chloroflexi bacterium RBG_13_51_18	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_51_18	1.91 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.64 %
Elusimicrobia	class	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.46 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	2.55 %
Candidatus Taylorbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Taylorbacteria	1.27 %
Chloroflexi bacterium RBG_13_51_18	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_51_18	1.91 %
Ralstonia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia	0.64 %
Elusimicrobia	class	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.46 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	2.55 %
Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_43_32b	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Taylorbacteria → Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_43_32b	1.27 %
Chloroflexi bacterium RBG_13_51_18	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_51_18	1.91 %
Ralstonia solanacearum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia solanacearum	0.64 %
Elusimicrobia	class	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	0.64 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003141\|Ga0052246_1015386	Not Available	870	Open in IMG/M
3300004214\|Ga0066646_10218262	Not Available	946	Open in IMG/M
3300004238\|Ga0066635_10512682	Not Available	510	Open in IMG/M
3300005782\|Ga0079367_1015234	Not Available	3676	Open in IMG/M
3300005782\|Ga0079367_1180070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Ralstonia → Ralstonia solanacearum	825	Open in IMG/M
3300006409\|Ga0078977_101298	Not Available	1385	Open in IMG/M
3300008255\|Ga0100403_1226843	Not Available	648	Open in IMG/M
3300008516\|Ga0111033_1057083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_51_18	4480	Open in IMG/M
3300008516\|Ga0111033_1075347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	3846	Open in IMG/M
3300008516\|Ga0111033_1152763	All Organisms → Viruses → Predicted Viral	1116	Open in IMG/M
3300008516\|Ga0111033_1187549	Not Available	2430	Open in IMG/M
3300008517\|Ga0111034_1239148	Not Available	1132	Open in IMG/M
3300008517\|Ga0111034_1267475	Not Available	9969	Open in IMG/M
3300008517\|Ga0111034_1280732	Not Available	5785	Open in IMG/M
3300008517\|Ga0111034_1300275	Not Available	7526	Open in IMG/M
3300009039\|Ga0105152_10328651	Not Available	639	Open in IMG/M
3300009039\|Ga0105152_10433712	Not Available	556	Open in IMG/M
3300009149\|Ga0114918_10135500	Not Available	1484	Open in IMG/M
3300009149\|Ga0114918_10715770	Not Available	524	Open in IMG/M
3300009488\|Ga0114925_10003406	Not Available	8252	Open in IMG/M
3300009488\|Ga0114925_10159007	Not Available	1475	Open in IMG/M
3300009488\|Ga0114925_10170052	Not Available	1429	Open in IMG/M
3300009488\|Ga0114925_10853269	Not Available	657	Open in IMG/M
3300009488\|Ga0114925_11047795	Not Available	594	Open in IMG/M
3300009488\|Ga0114925_11282711	Not Available	540	Open in IMG/M
3300009499\|Ga0114930_10490708	Not Available	556	Open in IMG/M
3300009528\|Ga0114920_10000874	Not Available	13495	Open in IMG/M
3300009529\|Ga0114919_10002987	Not Available	13657	Open in IMG/M
3300009529\|Ga0114919_10008318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	8192	Open in IMG/M
3300009529\|Ga0114919_10036187	Not Available	3691	Open in IMG/M
3300009529\|Ga0114919_10038950	Not Available	3551	Open in IMG/M
3300009529\|Ga0114919_10059827	Not Available	2807	Open in IMG/M
3300009529\|Ga0114919_10077853	Not Available	2423	Open in IMG/M
3300009529\|Ga0114919_10216206	Not Available	1362	Open in IMG/M
3300009529\|Ga0114919_10337695	Not Available	1053	Open in IMG/M
3300009529\|Ga0114919_10384834	Not Available	977	Open in IMG/M
3300009529\|Ga0114919_10536442	Not Available	805	Open in IMG/M
3300009529\|Ga0114919_10671344	Not Available	706	Open in IMG/M
3300009529\|Ga0114919_10693977	Not Available	693	Open in IMG/M
3300009529\|Ga0114919_10748808	Not Available	664	Open in IMG/M
3300009529\|Ga0114919_11122098	Not Available	527	Open in IMG/M
3300009529\|Ga0114919_11166485	Not Available	516	Open in IMG/M
3300009788\|Ga0114923_11568772	Not Available	518	Open in IMG/M
3300012964\|Ga0153916_11367079	Not Available	785	Open in IMG/M
3300012964\|Ga0153916_12148397	Not Available	627	Open in IMG/M
3300013086\|Ga0163202_1004250	Not Available	2694	Open in IMG/M
3300013086\|Ga0163202_1008167	Not Available	1964	Open in IMG/M
3300013086\|Ga0163202_1101315	Not Available	608	Open in IMG/M
3300013089\|Ga0163203_1000299	Not Available	13148	Open in IMG/M
3300013089\|Ga0163203_1103721	Not Available	848	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10305511	Not Available	946	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10803281	Not Available	530	Open in IMG/M
(restricted) 3300013127\|Ga0172365_10871722	Not Available	505	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10111689	All Organisms → Viruses → Predicted Viral	1814	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10388125	Not Available	851	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10620174	Not Available	639	Open in IMG/M
(restricted) 3300013128\|Ga0172366_10801629	Not Available	548	Open in IMG/M
(restricted) 3300013129\|Ga0172364_10324954	Not Available	1001	Open in IMG/M
3300014613\|Ga0180008_1005183	Not Available	6090	Open in IMG/M
3300014613\|Ga0180008_1010854	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Taylorbacteria → Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_43_32b	3944	Open in IMG/M
3300014613\|Ga0180008_1017934	Not Available	2948	Open in IMG/M
3300014613\|Ga0180008_1068967	Not Available	1400	Open in IMG/M
3300014613\|Ga0180008_1084308	Not Available	1250	Open in IMG/M
3300014613\|Ga0180008_1105152	Not Available	1104	Open in IMG/M
3300014613\|Ga0180008_1354983	Not Available	554	Open in IMG/M
3300014656\|Ga0180007_10030078	All Organisms → Viruses → Predicted Viral	4155	Open in IMG/M
3300014656\|Ga0180007_10133625	Not Available	1623	Open in IMG/M
3300014656\|Ga0180007_10160669	All Organisms → Viruses → Predicted Viral	1451	Open in IMG/M
3300014656\|Ga0180007_10189948	Not Available	1312	Open in IMG/M
3300014656\|Ga0180007_10396097	Not Available	841	Open in IMG/M
3300014656\|Ga0180007_10649258	Not Available	628	Open in IMG/M
3300014656\|Ga0180007_10658922	Not Available	622	Open in IMG/M
3300014656\|Ga0180007_10779865	Not Available	564	Open in IMG/M
3300015370\|Ga0180009_10010731	Not Available	8675	Open in IMG/M
3300015370\|Ga0180009_10049108	Not Available	2670	Open in IMG/M
3300015370\|Ga0180009_10169647	Not Available	1021	Open in IMG/M
3300015370\|Ga0180009_10172443	Not Available	1008	Open in IMG/M
3300015370\|Ga0180009_10180721	Not Available	974	Open in IMG/M
3300015370\|Ga0180009_10292902	Not Available	682	Open in IMG/M
3300015370\|Ga0180009_10334671	Not Available	619	Open in IMG/M
3300015370\|Ga0180009_10351538	Not Available	598	Open in IMG/M
3300015370\|Ga0180009_10351951	Not Available	597	Open in IMG/M
3300015370\|Ga0180009_10368790	Not Available	578	Open in IMG/M
3300015370\|Ga0180009_10384317	Not Available	561	Open in IMG/M
3300015370\|Ga0180009_10432812	Not Available	516	Open in IMG/M
3300020171\|Ga0180732_1008369	Not Available	4321	Open in IMG/M
3300020171\|Ga0180732_1013556	All Organisms → Viruses → Predicted Viral	3165	Open in IMG/M
3300020171\|Ga0180732_1035836	Not Available	1704	Open in IMG/M
3300020171\|Ga0180732_1113931	Not Available	830	Open in IMG/M
3300020171\|Ga0180732_1124614	Not Available	788	Open in IMG/M
3300022553\|Ga0212124_10003085	Not Available	13094	Open in IMG/M
3300022553\|Ga0212124_10021676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_51_18	4110	Open in IMG/M
3300022553\|Ga0212124_10072274	Not Available	1981	Open in IMG/M
3300022553\|Ga0212124_10474540	Not Available	653	Open in IMG/M
3300022553\|Ga0212124_10498817	All Organisms → cellular organisms → Bacteria → Elusimicrobia → Elusimicrobia	635	Open in IMG/M
3300022553\|Ga0212124_10697280	Not Available	524	Open in IMG/M
3300024429\|Ga0209991_10000874	Not Available	13495	Open in IMG/M
3300024432\|Ga0209977_10097456	Not Available	1440	Open in IMG/M
3300024432\|Ga0209977_10157196	Not Available	1113	Open in IMG/M
3300024433\|Ga0209986_10003532	Not Available	13657	Open in IMG/M
3300024433\|Ga0209986_10003705	Not Available	13283	Open in IMG/M
3300024433\|Ga0209986_10034327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3191	Open in IMG/M
3300024433\|Ga0209986_10040946	All Organisms → Viruses → Predicted Viral	2840	Open in IMG/M
3300024433\|Ga0209986_10106193	Not Available	1516	Open in IMG/M
3300024433\|Ga0209986_10137582	Not Available	1279	Open in IMG/M
3300024433\|Ga0209986_10144930	Not Available	1235	Open in IMG/M
3300024433\|Ga0209986_10202562	Not Available	989	Open in IMG/M
3300024433\|Ga0209986_10244265	Not Available	873	Open in IMG/M
3300024433\|Ga0209986_10286887	Not Available	784	Open in IMG/M
3300024433\|Ga0209986_10347672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	688	Open in IMG/M
3300024433\|Ga0209986_10365794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	665	Open in IMG/M
3300024433\|Ga0209986_10528137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	515	Open in IMG/M
3300025285\|Ga0208046_1069951	Not Available	656	Open in IMG/M
3300027893\|Ga0209636_10615124	Not Available	871	Open in IMG/M
3300028620\|Ga0257139_1070638	Not Available	572	Open in IMG/M
3300031227\|Ga0307928_10024332	Not Available	4116	Open in IMG/M
3300031227\|Ga0307928_10174304	Not Available	1171	Open in IMG/M
3300031227\|Ga0307928_10500616	Not Available	542	Open in IMG/M
3300031280\|Ga0307428_1022835	Not Available	2036	Open in IMG/M
3300031539\|Ga0307380_10013564	Not Available	10056	Open in IMG/M
3300031539\|Ga0307380_10023553	Not Available	7275	Open in IMG/M
3300031539\|Ga0307380_10045224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_13_51_18	4914	Open in IMG/M
3300031539\|Ga0307380_10094089	Not Available	3111	Open in IMG/M
3300031539\|Ga0307380_10201656	Not Available	1921	Open in IMG/M
3300031539\|Ga0307380_10589236	Not Available	959	Open in IMG/M
3300031539\|Ga0307380_11160026	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Taylorbacteria → Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_43_32b	602	Open in IMG/M
3300031565\|Ga0307379_10211091	Not Available	1978	Open in IMG/M
3300031565\|Ga0307379_10747681	Not Available	870	Open in IMG/M
3300031565\|Ga0307379_10821120	Not Available	816	Open in IMG/M
3300031565\|Ga0307379_11106178	Not Available	665	Open in IMG/M
3300031565\|Ga0307379_11269674	Not Available	605	Open in IMG/M
3300031643\|Ga0315533_1152453	Not Available	584	Open in IMG/M
3300031669\|Ga0307375_10040680	Not Available	3640	Open in IMG/M
3300031669\|Ga0307375_10146323	All Organisms → Viruses → Predicted Viral	1641	Open in IMG/M
3300031772\|Ga0315288_10109399	Not Available	3144	Open in IMG/M
(restricted) 3300031806\|Ga0315306_10288918	Not Available	590	Open in IMG/M
3300031862\|Ga0315280_10008266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	13651	Open in IMG/M
3300031862\|Ga0315280_10021642	Not Available	6841	Open in IMG/M
3300031862\|Ga0315280_10038381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	4417	Open in IMG/M
3300031862\|Ga0315280_10092631	Not Available	2186	Open in IMG/M
3300031862\|Ga0315280_10109173	Not Available	1905	Open in IMG/M
3300031862\|Ga0315280_10169860	Not Available	1309	Open in IMG/M
3300031862\|Ga0315280_10270540	Not Available	879	Open in IMG/M
3300031862\|Ga0315280_10301707	Not Available	801	Open in IMG/M
(restricted) 3300031876\|Ga0315310_10005902	Not Available	7497	Open in IMG/M
(restricted) 3300031876\|Ga0315310_10198952	Not Available	901	Open in IMG/M
(restricted) 3300031877\|Ga0315314_1236374	Not Available	631	Open in IMG/M
3300032020\|Ga0315296_10003467	Not Available	13129	Open in IMG/M
3300032020\|Ga0315296_10008272	Not Available	8043	Open in IMG/M
3300032020\|Ga0315296_10221489	Not Available	1118	Open in IMG/M
3300032020\|Ga0315296_10368154	Not Available	793	Open in IMG/M
3300032020\|Ga0315296_10500743	Not Available	642	Open in IMG/M
3300032020\|Ga0315296_10660799	Not Available	529	Open in IMG/M
3300032069\|Ga0315282_10065589	Not Available	3657	Open in IMG/M
3300032069\|Ga0315282_10608922	Not Available	589	Open in IMG/M
3300032070\|Ga0315279_10017182	Not Available	7915	Open in IMG/M
3300033991\|Ga0334965_0149107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	983	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	91.08%
Terrestrial	Environmental → Terrestrial	8.92%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	52.23%
Marine	Environmental → Aquatic → Marine	36.94%
Soil	Environmental → Terrestrial → Soil	8.92%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.91%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	28.66%
Oceanic	Environmental → Aquatic → Marine → Oceanic	28.03%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	22.29%
Clay	Environmental → Terrestrial → Soil → Clay	8.92%
Coastal	Environmental → Aquatic → Marine → Coastal	6.37%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.91%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.27%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.27%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.64%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.64%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	27.39%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	22.29%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	21.02%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	8.92%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	7.64%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	6.37%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.91%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.27%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.27%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	0.64%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.64%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	26.75%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	21.66%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	19.75%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	8.92%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	7.64%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	6.37%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	1.91%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	1.27%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.27%
Aquifer	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Aquifer	0.64%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.64%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.64%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.64%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	0.64%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.64%
Marine Sediment	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Sediment	0.64%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003141	Marine sediment microbial communities from deep subseafloor of Shimokita Peninsula, Japan - 107 mbsf	Environmental	Open in IMG/M
3300004214	Groundwater microbial communities from aquifer - Crystal Geyser CG17_big_fil_post_rev_8/21/14_2.50	Environmental	Open in IMG/M
3300004238	Groundwater microbial communities from aquifer - Crystal Geyser CG06_land_8/20/14_3.00	Environmental	Open in IMG/M
3300005782	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf, PM3	Environmental	Open in IMG/M
3300006409	Viral communities from the deep bioline of CORK borehole observatory U136A, on the Juan de Fuca Ridge Flank, Pacific Ocean - passive in situ filtration, Fraction 20	Environmental	Open in IMG/M
3300008255	Groundwater microbial communities from Crystal Geyser aquifers in Utah, USA - Crystal Geyser metaG 2015-01t	Environmental	Open in IMG/M
3300008516	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf. Combined Assembly of MM3PM3	Environmental	Open in IMG/M
3300008517	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 175 cmbsf. Combined Assembly of Gp0128389 and Gp0131431 MM4PM4	Environmental	Open in IMG/M
3300009039	Lake sediment microbial communities from Lake Baikal, Russia to study Microbial Dark Matter (Phase II) - Lake Baikal sediment 0-5 cm	Environmental	Open in IMG/M
3300009149	Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG	Environmental	Open in IMG/M
3300009488	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG	Environmental	Open in IMG/M
3300009499	Deep subsurface microbial communities from Anholt, Denmark to uncover new lineages of life (NeLLi) - Anholt_01485 metaG	Environmental	Open in IMG/M
3300009528	Deep subsurface microbial communities from South Pacific Ocean to uncover new lineages of life (NeLLi) - Chile_00310 metaG	Environmental	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300009788	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00157 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013086	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_300m	Environmental	Open in IMG/M
3300013089	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_330m	Environmental	Open in IMG/M
3300013127 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cm	Environmental	Open in IMG/M
3300013128 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 69cm	Environmental	Open in IMG/M
3300013129 (restricted)	Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 10cm	Environmental	Open in IMG/M
3300014613	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - MM_PW_MetaG	Environmental	Open in IMG/M
3300014656	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - MM_PC_MetaG	Environmental	Open in IMG/M
3300015370	Groundwater microbial communities from the Aspo Hard Rock Laboratory (HRL) deep subsurface site, Sweden - OS_PC_MetaG	Environmental	Open in IMG/M
3300020171	Groundwater microbial communities from the Olkiluoto Island deep subsurface site, Finland - KR11_0.1 MetaG	Environmental	Open in IMG/M
3300022553	Powell_combined assembly	Environmental	Open in IMG/M
3300024429	Deep subsurface microbial communities from South Pacific Ocean to uncover new lineages of life (NeLLi) - Chile_00310 metaG (SPAdes)	Environmental	Open in IMG/M
3300024432	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG (SPAdes)	Environmental	Open in IMG/M
3300024433	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes)	Environmental	Open in IMG/M
3300025285	Freshwater microbial communities from Powell Lake, British Columbia, Canada to study Microbial Dark Matter (Phase II) - PL_2010_300m (SPAdes)	Environmental	Open in IMG/M
3300027893	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54 (SPAdes)	Environmental	Open in IMG/M
3300028620	Metatranscriptome of saline water microbial communities from Sakinaw Lake, British Columbia, Canada - sak_2010_1_5_80m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031227	Saline water microbial communities from Ace Lake, Antarctica - #232	Environmental	Open in IMG/M
3300031280	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-240	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031643	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-30	Environmental	Open in IMG/M
3300031669	Soil microbial communities from Risofladan, Vaasa, Finland - TR-1	Environmental	Open in IMG/M
3300031772	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20	Environmental	Open in IMG/M
3300031806 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP1	Environmental	Open in IMG/M
3300031862	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40	Environmental	Open in IMG/M
3300031876 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP5	Environmental	Open in IMG/M
3300031877 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP9	Environmental	Open in IMG/M
3300032020	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_18	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032070	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20	Environmental	Open in IMG/M
3300033991	Sediment microbial communities from Lake Vrana, Zadar, Croatia - 4 bact	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0052246_10153862	3300003141	Marine Sediment	MKWTPDLIIALVLIVGCFVLLGLGIDSEVKSILTVAAGWCFGSQYQVRRQKVLSPGTKE*
Ga0066646_102182621	3300004214	Groundwater	MKFTVDLLIALILIVGCFTLLILGIDSEVKSILTLAAGWAFGSTYLARKRKTPKP*
Ga0066635_105126822	3300004238	Groundwater	MKFTADLLIALILIVGCFTLLILGIDSEVKSILTLAAGWAFGSTYVARKRKTPKP*
Ga0079367_10152343	3300005782	Marine Sediment	MKWTPDTIIAFVLVIGCLILVALRIDSEVKSILTVAAGWIFGSQYMEKQIRKGGKHG*
Ga0079367_11800701	3300005782	Marine Sediment	ALVIIVGCFTLIGCGIDSEVKSILTVAAGWAFGSQYQARRSEKGGK*
Ga0078977_1012983	3300006409	Marine	MIYDYLDTIIALILVIGCFILLGLGIDTEVKSIITMAAGWAFGSQYQARKVRKR*
Ga0100403_12268432	3300008255	Aquifer	MKFTADLLIALILIVGCFTLLILGIDSEVKSILTLAAGWAFGSSYLARKRKTPKP*
Ga0111033_10570838	3300008516	Marine Sediment	MKWTPDVIIALVIIVGCFTLIGCGIDSEVKSILTVAAGWAFGSQYQARRSEKGGK*
Ga0111033_10753475	3300008516	Marine Sediment	MKWTPDLIIALVLIVGCMALVFSGIDGEVKSILTLAAGWAFGSQFIERKRKKGGE*
Ga0111033_11527631	3300008516	Marine Sediment	KMKWTPDIVVALVLIIGCLGLIASGIDGEVKSVLTLAAGWAFGSQFIEHKRNRGGK*
Ga0111033_11875494	3300008516	Marine Sediment	MKWTPDLIIALILIIGCLALVFTGIDGEVKSILTLAAGWTFGSQFYERRKRNGGK*
Ga0111034_12391483	3300008517	Marine Sediment	MKWTPDIIIALVLIVGCLVLIAFRIDGEVKSILTVASGWAFGSQYQARREAKGGK*
Ga0111034_126747518	3300008517	Marine Sediment	MKWTPDTIIAFVLVIGCLILVALRIDSEVKSILTVAAGWIFGSQYMEKQIRKGGKNG*
Ga0111034_12807324	3300008517	Marine Sediment	MKWTPDLIIALVLVVGCFALIATGIDGEVKSILTVAAGWAFGSQYQARKASKGGK*
Ga0111034_13002755	3300008517	Marine Sediment	MKWTPDIVVALVLIIGCLGLIASGIDGEVKSVLTLAAGWAFGSQFIEHKRNRGGK*
Ga0105152_103286513	3300009039	Lake Sediment	MKLSWDIIIALVLIVGCFTLILTGVDGEVKSILTMAAGWCFGSAYLQRTGKGGK*
Ga0105152_104337121	3300009039	Lake Sediment	MKWTPDLVIALVLVIGCLALLGLQIDGEVKSILTMAAGWTFGSGYANRKAAARR*
Ga0114918_101355004	3300009149	Deep Subsurface	MKWTPDIIIALVLILGCFTLIATGIDGEVKSILTLASGWAFGSQFSERRKKKGGD*
Ga0114918_107157702	3300009149	Deep Subsurface	MKWTPDLIIAIILIVGCLALVFTGINGEVKSILTLAAGWTFGTQFADRRSRRGGK*
Ga0114925_1000340615	3300009488	Deep Subsurface	MKWTPDLVIAIILIVGCLGLIASGIDGEVKSILTLAAGWAFGSQYQERRLKKGGN*
Ga0114925_101590075	3300009488	Deep Subsurface	VKWTPDLIIALVLIVSCVGLLAFGIDGEVKSILTLAAGWTFGSQFAERRKRKGGN*
Ga0114925_101700524	3300009488	Deep Subsurface	MIIAMILVVGCLALITLGIDGEVKSILTIAAGWCFGAQYQARKTGKGGK*
Ga0114925_108532691	3300009488	Deep Subsurface	WTPDLIISLVLVVGCFALIATGIDGEVKSVLTVAAGWAFGSQYQARKITKGG*
Ga0114925_110477951	3300009488	Deep Subsurface	ERRRVLKWTPYLIIALVLIVGCLGLVFTGIDGEVKSILTLAAGWAFGSQYQTRRITRGG*
Ga0114925_112827112	3300009488	Deep Subsurface	MKWTPDLIIALVLILSCVALIATGIDGEVKSILTLAAGWAFGTQFQAKRAAKGG*
Ga0114930_104907081	3300009499	Deep Subsurface	MKWTPDLIIALVLIVGCLALVFTGIDGEVKSILTVAAGWAFGSQYQVRKATKGGK*
Ga0114920_1000087412	3300009528	Deep Subsurface	MKWTPDLIIAMVLILGCFALLFTGIDGEVKSILLLAAGWAFGSQFQARRIQKGGP*
Ga0114919_1000298711	3300009529	Deep Subsurface	MKWTPDLIIALVLIVGSIGLIASGIDGEVKSILTLAAGWAFGSQFVERKGRKGG*
Ga0114919_100083189	3300009529	Deep Subsurface	MKWTPDMIIAMVLVVSCVALIATGIDSEVKSILTLAAGWAFGSQYVARRNSKGGK*
Ga0114919_100361871	3300009529	Deep Subsurface	MRWTPDLIIALVIIVGCFALIAFSIDSEVKSILTVAAGWAFGSQYQVRRQQKGGK*
Ga0114919_100389504	3300009529	Deep Subsurface	LKWTPDLIIALVLVVGCLALIFTGLDGEVKAILTIAAGWCFGSQYQARKVTKGGK*
Ga0114919_100598274	3300009529	Deep Subsurface	MKWTPDLIIALVLIVGCLILIAFRIDSEVKSILTVAAGWAFGSQYQVRRTAKGGK*
Ga0114919_100778532	3300009529	Deep Subsurface	MKWTPDMIIALVLVVSCVALIATGIDGEVKSILTLAAGWAFGSQYQVKRAEKGGK*
Ga0114919_102162062	3300009529	Deep Subsurface	MKWTPDTIIAAVLVIGCLVLVALRIDSEVKSILTVAAGWIFGSQYMEKKIRKGGKHG*
Ga0114919_103376952	3300009529	Deep Subsurface	MKWTPDLIIAIIIVIGCLILIGLSIDSEVKSILTVAAGWIFGSQYQIRRISTGGK*
Ga0114919_103848343	3300009529	Deep Subsurface	MKWTPDTVIAIIIVVGCLILIGLGIDSEVKSILTVAAGWIFGSQYQVRKLSKGGK*
Ga0114919_105364422	3300009529	Deep Subsurface	MRWTPDLVIAMVLICSCIALIATGIDSEVKSILTVASGWVFGTQIESRRHNRGVKQ*
Ga0114919_106713442	3300009529	Deep Subsurface	MKPTIDELIALILVVGCLALLFTGIDGEVKSILTLAAGWAFGSVYQRKRKR*
Ga0114919_106939773	3300009529	Deep Subsurface	IIAIVIVVGCLILIGLKIDSEVKSILTVAAGWIFGSQYQVRKISKGGK*
Ga0114919_107488081	3300009529	Deep Subsurface	MKWSPDLVIALVLVVGCLALISTGIDGEVKAILTIAAGWCFGSQYQARKASKGGK*
Ga0114919_111220981	3300009529	Deep Subsurface	MKWTPDLIIALVLIVGCLALVFTGIDGEVKSILTLAAGWAFGSQYQ
Ga0114919_111664852	3300009529	Deep Subsurface	MKWTPDLIIAIILIVGCLILIAFRIDSEVKSILTVAAGWAFGSQYQVRRAGKGGK*
Ga0114923_115687721	3300009788	Deep Subsurface	MKWTPDLIIATILIMGCLALVFTGIDGEVKSILTLAAGWAFGSQFQSRRTAKGGK*
Ga0153916_113670792	3300012964	Freshwater Wetlands	MAKILLRGISNMKWTPDLIIALIIIIGCFLLIAFHVDGEVKSILTMAAGWAFGSQYQVRKQIPGGK*
Ga0153916_121483973	3300012964	Freshwater Wetlands	MKWTADIIIALVLIVGCFILIFSGIDGEVKSILTLAAGWCFGNVYIQRTRKGGA*
Ga0163202_10042504	3300013086	Freshwater	MKWTPDMIIAILLVVGCLALISMHIDGEVKSILTIAAGWCFGSGYMARKSSKGG*
Ga0163202_10081673	3300013086	Freshwater	MKWTPDMIIAIILVLGSIALIACHIDGEVKSILTIAAGWAFGAGYQQRRAGKGGTP*
Ga0163202_11013152	3300013086	Freshwater	MKWTPDLIIALTLVVGCIVLIALRIDGEVKSILTMSAGWAFGSQYMMRKSGGK*
Ga0163203_10002996	3300013089	Freshwater	MKWTPDLVIALVLVVGCLALIFTGIDGEVKGILIMAAGWAFGSQYQTRRVNKGVK*
Ga0163203_11037212	3300013089	Freshwater	MKWTPDLIIAVILVVGCLALLFTGIDGEVKSILTIAAGWCFGSQYQARTIQKTGNKKPKEK*
(restricted) Ga0172365_103055112	3300013127	Sediment	MKWTPDLIIAIILIVGCFVLICAGIDGEVKSILTMAAGWCFGSAYMQRAHKGGE*
(restricted) Ga0172365_108032812	3300013127	Sediment	MKWTPDTIIAAGILLGCFIMIGLGIDSEVKSIMTIAAGWIFASQYQIRRHKGGDKK*
(restricted) Ga0172365_108717222	3300013127	Sediment	MVRVSWTPDLIIALILVVGCLVLITLGIDSEVKSILTLAAGWAFGSQFQIRHKGKGGN
(restricted) Ga0172366_101116893	3300013128	Sediment	MRWTPDTIIAAGVLLGCFIMIGLGIDSEVKSIMTIAAGWIFASQYQIRRHKGGDKK*
(restricted) Ga0172366_103881251	3300013128	Sediment	VIVCGCIILIATGIDSHVKSILGIAAGWAFGSQYQTRRAAQGGK*
(restricted) Ga0172366_106201742	3300013128	Sediment	MKWTPDLIIALVLIVGCLALIFTGIDREVKSILTLAAGWCFGNVYLQRTRKGGT*
(restricted) Ga0172366_108016293	3300013128	Sediment	MKWTPDLIIAIILIVGCFVLICAGIDGEVKSILTMAAGWCFGSAYMQRTHKGGD*
(restricted) Ga0172364_103249543	3300013129	Sediment	MRWTPDTIIAAGVLLGCFIMIGLGIDSEVKSIMTIAAGWIFASQYQIRRYEGRDKK*
Ga0180008_100518311	3300014613	Groundwater	MKWTPDLIIALILEIGALGLLFTGIDGEVKVILTMAAGWAFGSQYSMKRQTNKEKREK*
Ga0180008_10108545	3300014613	Groundwater	MKWTPDLIIALVLIVGCMALIFTGIDGEVKSILTLAAGWAFGSQFQARHQRKGGE*
Ga0180008_10179344	3300014613	Groundwater	MKWTPDLIIAIILIVGCMALIFTGINGEVKSILTLAAGWTFGTQFADRRGKRGGK*
Ga0180008_10689672	3300014613	Groundwater	MKWTPDLIIALVLIVGCLGLVFTGIDGEVKSILTLAAGWTFGTQYKAIKARRGGK*
Ga0180008_10843082	3300014613	Groundwater	MKWRPDLIIAIILIVGCLGLVFTGIDGEVKSILTLAAGWVFGSQFMERKASKGGK*
Ga0180008_11051522	3300014613	Groundwater	MKWTPDIIIALVLIVGCFILIFTGIDGEVKSILTLAAGWCFGNVYLQRTGKGGK*
Ga0180008_13549833	3300014613	Groundwater	TPDLIIAMVLVVGCLALICLRIDGEVKSILTVAAGWAFGSQYQSRKKGGK*
Ga0180007_100300784	3300014656	Groundwater	MKWTPDLVIAMVLVCSCVALLFTGIDGEVKAILTIAAGWCFGSQFQARRNNQGGK*
Ga0180007_101336251	3300014656	Groundwater	MKWTPDLIIALVLIVGCLALVFTGVDGEVKSILTIAAGWVFGSQYQARKIGKEGK*
Ga0180007_101606693	3300014656	Groundwater	MKWTPDLVIAIILVVGCIGLIASGIDGEVKSILTLAAGWAFGSQYQTRKVTKGEK*
Ga0180007_101899484	3300014656	Groundwater	ALVLIVGCMALIFTGIDGEVKSILTLAAGWAFGSQFQARHQRKGGE*
Ga0180007_103960971	3300014656	Groundwater	MKFTADLLIALILIVGCFTLLILKIDGEVKSILTLAAGWAFGTTYLARKGKGK*
Ga0180007_106492582	3300014656	Groundwater	MSLERGKDMKWTPDLIIALVLIVGCLALVLTGIDGEVKSILTLAAGWAFGSQYQERRIMKGGK*
Ga0180007_106589222	3300014656	Groundwater	MKWTPDLIIAIILIVSCVGLIATGIDGEVKSILTVAAGWVFGTQYSDRKKKKGG*
Ga0180007_107798652	3300014656	Groundwater	MKWTPDIIIALVLIVGCFILIFTGIDGEVKSILTLAAGWCFGNVYLQRKGKGGK*
Ga0180009_1001073111	3300015370	Groundwater	MKWTPDLIIALILILSSVGLIATGIDGEVKSILTLAAGWAFGSQFQARRLEKGVK*
Ga0180009_100491084	3300015370	Groundwater	MKWTPDLIIALILVVGCFALLATGIDGEVKSILTLAAGWAFGTQYQARQVTKASKKKEE*
Ga0180009_101696472	3300015370	Groundwater	VKWTPDTIIALVLVVGCLILLGFGINSEMKSILAIAAGWAFGSQYQARRIK*
Ga0180009_101724432	3300015370	Groundwater	MKWTPDTVIALVLVVGCLVLIALHIDTEVKSILALAAGWAFGAQYQARKKK*
Ga0180009_101807213	3300015370	Groundwater	MKWTPDLFIALIIVVGCFILLGFRIDGEVKSILTVAAGWVFGSQFIRKRTEKGDK*
Ga0180009_102929023	3300015370	Groundwater	MKWTPDLIIAMVLVVGCLLLLVLRIDGEVKSILTLAAGWAFGSQYIKKRTGEGGK*
Ga0180009_103346713	3300015370	Groundwater	MKWTPDLIIALVLIVGSLVLISLRIDGEVKSILTMAAGWAFGSQYQSRKLVKGGK*
Ga0180009_103515383	3300015370	Groundwater	MKWTPDLIIALVLIVGCLVLICLRIDGEVKSILLMSAGWAFGSQYQTRKVKGGQ*
Ga0180009_103519513	3300015370	Groundwater	EVNKMKWTPDTIIALILVVGCLTLLGLGINSEVKSILAIAAGWAFGSQYQARRVK*
Ga0180009_103687903	3300015370	Groundwater	IALIIVVGCFLLMAFRIDGEVKSILTVAAGWVFGSQYIKKRIG*
Ga0180009_103843172	3300015370	Groundwater	MKWTPDLIIALILIVGCFTLLVLHIDSEVKSILLMAAGWAFGSQYQARKTRGG*
Ga0180009_104328122	3300015370	Groundwater	MRWTPDLIIALILVVGCLALIAFDIDSEVKSILTLAAGWAFGSQFQARRLEKGGK*
Ga0180732_10083693	3300020171	Groundwater	MKWTPDLIIALVLIVGCLGLLILRIDGEVKSILTVAAGWAFGSQYQVRKTRGG
Ga0180732_10135566	3300020171	Groundwater	MKWTPDLIIALVLIVGCLGLIFTGIDGEVKSILTLAAGWAFGSQYQARRVSKGG
Ga0180732_10358364	3300020171	Groundwater	MKFTADLLITLVLIVGCFTLLILKIDGEVKSILTLAAGWAFGSVYLARKGKSK
Ga0180732_11139312	3300020171	Groundwater	VKWTPDLIIALVLVVGCLVLLCFGINSEVKSILTMAAGWAFGSQYQSRKVKGG
Ga0180732_11246142	3300020171	Groundwater	MKWTPDLIIALILIVGCLGLVFTGIDGEVKSILTLAAGWTFGSQYIERKAKRGGK
Ga0212124_1000308510	3300022553	Freshwater	MKWTPDLVIALVLVVGCLALIFTGIDGEVKGILIMAAGWAFGSQYQTRRVNKGVK
Ga0212124_100216765	3300022553	Freshwater	MKWTPDMIIAILLVVGCLALISMHIDGEVKSILTIAAGWCFGSGYMARKSSKGG
Ga0212124_100722743	3300022553	Freshwater	MKWTPDMIIAIILVLGSIALIACHIDGEVKSILTIAAGWAFGAGYQQRRAGKGGTP
Ga0212124_104745401	3300022553	Freshwater	MKWTPDLVIALTLVVGCIVLIALRIDGEVKSILTMSAGWAFGSQYMMRKSGGK
Ga0212124_104988172	3300022553	Freshwater	MKWTPDLVIALVLIVGCLALIATGIDGEVKSILTVAGGWVFGSQYQARHATKGGK
Ga0212124_106972801	3300022553	Freshwater	IAMVLIVGCLGLVFTGIDGEVKSILTLAGGWAFGSQYQARRVRKGG
Ga0209991_1000087412	3300024429	Deep Subsurface	MKWTPDLIIAMVLILGCFALLFTGIDGEVKSILLLAAGWAFGSQFQARRIQKGGP
Ga0209977_100974565	3300024432	Deep Subsurface	VKWTPDLIIALVLIVSCVGLLAFGIDGEVKSILTLAAGWTFGSQFAERRKRKGGN
Ga0209977_101571963	3300024432	Deep Subsurface	VKWEPDMIIAMILVVGCLALITLGIDGEVKSILTIAAGWCFGAQYQARKTGKGGK
Ga0209986_1000353215	3300024433	Deep Subsurface	MKWTPDLIIALVLIVGSIGLIASGIDGEVKSILTLAAGWAFGSQFVERKGRKGG
Ga0209986_1000370511	3300024433	Deep Subsurface	MKWTPDLIIALILVVGCLGLLFTGINGEVKSVLTVAAGWAFGSQFQQRRTKNGGKKDAKR
Ga0209986_100343275	3300024433	Deep Subsurface	MKWTPDTIIALILVVGCLALMGFGIDGEVKSILTVSAGWAFGTQYHVRYLASHEKDCKGD
Ga0209986_100409464	3300024433	Deep Subsurface	MKWTPDMIIAMVLVVSCVALIATGIDSEVKSILTLAAGWAFGSQYVARRNSKGGK
Ga0209986_101061933	3300024433	Deep Subsurface	MKWTPDMIIALVLVVSCVALIATGIDGEVKSILTLAAGWAFGSQYQVKRAEKGGK
Ga0209986_101375823	3300024433	Deep Subsurface	MKWTPDLIIAIIIVIGCLILIGLSIDSEVKSILTVAAGWIFGSQYQIRRISTGGK
Ga0209986_101449302	3300024433	Deep Subsurface	LKWTPDLIIALVLVVGCLALIFTGLDGEVKAILTIAAGWCFGSQYQARKVTKGGK
Ga0209986_102025622	3300024433	Deep Subsurface	MKWTPDLIIALVLIVGCLILIAFRIDSEVKSILTVAAGWAFGSQYQVRRTAKGGK
Ga0209986_102442653	3300024433	Deep Subsurface	MKWTPDTIIAAVLVIGCLVLVALRIDSEVKSILTVAAGWIFGSQYMEKKIRKGGKHG
Ga0209986_102868873	3300024433	Deep Subsurface	MKWTPDLIIAIILIVGCLILIAFRIDSEVKSILTVAAGWAFGSQYQVRRAGKGGK
Ga0209986_103476722	3300024433	Deep Subsurface	MKWTPDLIIALVIVVGCLLLIGLGIDSEVKSILTVAAGWVFGSQYQVRKISKGGG
Ga0209986_103657941	3300024433	Deep Subsurface	MKWTPDTVIAIIIVVGCLILIGLGIDSEVKSILTVAAGWIFGSQYQVRKLSKGGK
Ga0209986_105281371	3300024433	Deep Subsurface	MKWTPDLIIAIVIVVGCLILIGLKIDSEVKSILTVAAGWIFGSQYQVRKISKGGK
Ga0208046_10699512	3300025285	Freshwater	MKWTPDLIIALTLVVGCIVLIALRIDGEVKSILTMSAGWAFGSQYMMRKSGGK
Ga0209636_106151243	3300027893	Marine Sediment	MKWTADIIIALVLIVGCLALIFTGINSEVKSILTLAAGWCFGSAYLQRTGKGGT
Ga0257139_10706383	3300028620	Marine	MKWTPDLVIAFTLIIACVVLIAFRIDSEVKSILTVASGWVFGTQIQTYRAKGNCNAIKGGEK
Ga0307928_100243324	3300031227	Saline Water	MKWTPDLIIALVLIVGCLALVFTGIDGEVKSILTLAAGWAFGSQFVEHKRRNGGK
Ga0307928_101743043	3300031227	Saline Water	MKWAPDLIIALVLIVGSIGLIATGIDGEVKSILTLAAGWAFGSQFVRKKG
Ga0307928_105006161	3300031227	Saline Water	MKWTPDFIIALVLIVGCLGLVFTGIDGEVKSILTLAAGWAFGSQFHDRKMKKGG
Ga0307428_10228352	3300031280	Salt Marsh	MHWTPDLIIALILVVGCLALIFTGIDGEVKSILTLAAGWAFGSQYQAKREKKGGE
Ga0307380_1001356413	3300031539	Soil	MKWTPDLIIALVLIVGCLALIFTGINGEVKSILTVAAGWAFGSQYKSKKDAKGG
Ga0307380_100235537	3300031539	Soil	MKWTPDLIIAMVLIVGCLGLVFSGIDGEVKSILTLAAGWAFGSQYQERKKRKGGE
Ga0307380_100452244	3300031539	Soil	MKWTPDLIIALVLVVGCLGLICLKIDGEVKSILTIAAGWAFGSGYQARKVKGG
Ga0307380_100940893	3300031539	Soil	MKWTPDLVIALVLIVGCLALIATGIDGEVKSILTVAGGWVFGSQYQARHVTKGGK
Ga0307380_102016562	3300031539	Soil	MKWTPDLIIAMVLIMGCLALVFTGIDGEVKSILTLAAGWVFGTQFSARREARRRR
Ga0307380_105892363	3300031539	Soil	MKWEPDLIIAFVLLVGCLILVFCGIDGEVKSILTIAAGWAFGVGYQTRKAERRRK
Ga0307380_111600262	3300031539	Soil	MKWTPDLIIALVLIVGCMALIFTGIDGEVKSILTLAAGWAFGSQFQARHQRKGGE
Ga0307379_102110914	3300031565	Soil	MRWTPDLIIALVLIVGCLALVFTGIDGEVKSILTLAAGWTFGSQFIERRKGKGEK
Ga0307379_107476811	3300031565	Soil	DLIIAMVLIVGCLGLVFTGIDGEVKSILTLASGWAFGSQYQVKKVAKGG
Ga0307379_108211202	3300031565	Soil	MKWTPKFIIALVLITGCLGLMLLGIDGEVKSILTLAAGWAFGTEYRAIKGSGG
Ga0307379_111061781	3300031565	Soil	MKWTPDLIIALVLVVGCLGLICLKIDGEVKSILTIAAGWAFGSGYQARK
Ga0307379_112696742	3300031565	Soil	LKWTPDLVIALVLIVGSIGLIASGIDGEVKSILTLAAGWAFGSQFIERKRKKGGE
Ga0315533_11524531	3300031643	Salt Marsh Sediment	MKWTPDTVCALVLIVGCIILIACRIDGEVKSILTVAAGWVFGTQFQLRQASKKEK
Ga0307375_100406805	3300031669	Soil	GKLRKEFDMKWTPDLIIALVLIVGCLALVFTGIDGEVKSILTLAAGWTFGSQFLAKRVNKGG
Ga0307375_101463234	3300031669	Soil	MRWTADLIVALVLIVGCLGLVFTGIDGEVKSILTLAAGWAFGSQYQVKKVAKGG
Ga0315288_101093991	3300031772	Sediment	MKWTPDTLIAAFLVVGCLILVAMSIDGEVKSILSIAAGWLFGSKFTANHKK
(restricted) Ga0315306_102889182	3300031806	Sediment	MKWTPDTITAIVIVVGCLLLLFFKLDGEVKSILTLAAGWIFGGQYQSRKALKEVYKTNA
Ga0315280_1000826615	3300031862	Sediment	MKLSWDIIIALVLIVGCFALIFTGIDGEVKSILTLAAGWCFGQAYLQRKGKGG
Ga0315280_100216423	3300031862	Sediment	MKWTPDTIIALILVVGCLALLGLGIDGEVKSILAGAGAWVFGSQYTARKASKGG
Ga0315280_100383818	3300031862	Sediment	MKWTPDTIIALILVVGCLVLLFLKIDGEVKSILCTAAGWAFGSQYQARKEKGG
Ga0315280_100926314	3300031862	Sediment	MKWTPDLIIAMVLIVGCLLLISLRIDGEVKSILTMAAGWAFGSQYQARHMAKGG
Ga0315280_101091733	3300031862	Sediment	VLIAIILIVGCLGLILSGIDGEVKSILTLAAGWTFGNQYGAMRKRGGKS
Ga0315280_101698603	3300031862	Sediment	MKWTPDLVIALVLIVGCLVLITCRIDGEVKSILTMAAGWCFGSQFIKKRAQ
Ga0315280_102705401	3300031862	Sediment	LLIAIILIVGCLGLILSGIDGEVKSILTLAAGWTFGNQYGAMRKRGGKS
Ga0315280_103017072	3300031862	Sediment	MKVSWTPDTVIALVLVVGCLTLLGLGIDGEVKSILAGAGAWVFGSQYTARKASKGG
(restricted) Ga0315310_100059027	3300031876	Sediment	MKWTTDFIIAFTLVIGCLVLIALHIDGEVKSVLGLAAGWAFGSQYQARKQKEGGG
(restricted) Ga0315310_101989522	3300031876	Sediment	MKWTPDLIIALVLIAGCFILIVAGIDSEVKSILTLAAGWCFGNVYLQRTRKGGT
(restricted) Ga0315314_12363741	3300031877	Sediment	MKWTADLIIALVLIVGCFILIITGIDGEVKSILTLAAGWCFGNVYIQRT
Ga0315296_1000346712	3300032020	Sediment	MKWTPDLIIAIIIVVGCLLLLGLKIDGEVKSVLTMAAGWVFGSQYQTRRAKGGK
Ga0315296_100082721	3300032020	Sediment	RYRPMKWTPDLIIAMVLVVGCMILLVLHIDSEVKSILTIAAGWAFGSGYFLRKRKGG
Ga0315296_102214892	3300032020	Sediment	MKWTPDLIIALVMVVGCFLLLGLGIDGEVKGILAVAAGWCFGSQYRIRKAKEEDK
Ga0315296_103681543	3300032020	Sediment	MKVWTPDFVIALVLIVGCLMLIAFKIDGEVKSILTMAGGWAFGSSYVKYRRKDG
Ga0315296_105007433	3300032020	Sediment	MKWTPDLVIALVLIVGCLVLIVCKIDGEVKSILTMAAGWCFGSQFIKKRAQ
Ga0315296_106607993	3300032020	Sediment	MKWTPDFIIALVLVVGCLALLILKIDGEVKSILTVAAGWAFGSQYQARKTKGV
Ga0315282_100655895	3300032069	Sediment	LKWTPDLLISLVLIVGCLLLIFLGVDGEVKSILTMAAGWAFGSQFIKKKGGTS
Ga0315282_106089222	3300032069	Sediment	MRWTPDTIIALILVVGCLVLLGLGIDGEVKSILAGAGAWVFGSQYTARKAGKGG
Ga0315279_1001718211	3300032070	Sediment	MRWTPDTIIAVILVVGCLVLLGLGIDGEVKSILAGAGAWVFGSQYTARKAGKGG
Ga0334965_0149107_426_590	3300033991	Sediment	MKWTPDLIIALVLIVGCFVLICAGIDGEVKSILTMAAGWCFGSAYMQRTHKGGD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters