Metagenome / Metatranscriptome Family F042776

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F042776
Family Type	Metagenome / Metatranscriptome
Number of Sequences	157
Average Sequence Length	67 residues
Representative Sequence	MIQINDLPAKEPESDARPSAAPASKPVRRLAGLRRIGAAFAWFAGVGAILGGLTGYWSTYRTVTTELLPPA
Number of Associated Samples	93
Number of Associated Scaffolds	157

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	7.10 %
% of genes near scaffold ends (potentially truncated)	98.09 %
% of genes from short scaffolds (< 2000 bps)	92.36 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (57.325 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.764 % of family members)
Environment Ontology (ENVO)	Unclassified (65.605 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.318 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.41% β-sheet: 0.00% Coil/Unstructured: 58.59%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 157 Family Scaffolds
PF01717	Meth_synt_2	5.10
PF03401	TctC	3.18
PF00042	Globin	1.27
PF00291	PALP	1.27
PF13432	TPR_16	1.27
PF02803	Thiolase_C	0.64
PF14234	DUF4336	0.64
PF04311	DUF459	0.64
PF07007	LprI	0.64
PF00583	Acetyltransf_1	0.64

COG ID	Name	Functional Category	% Frequency in 157 Family Scaffolds
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	5.10
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	3.18
COG1017	Hemoglobin-like flavoprotein	Energy production and conversion [C]	1.27
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.64
COG2845	Peptidoglycan O-acetyltransferase, SGNH hydrolase family	Cell wall/membrane/envelope biogenesis [M]	0.64
COG3755	Uncharacterized conserved protein YecT, DUF1311 family	Function unknown [S]	0.64

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.32 %
All Organisms	root	All Organisms	42.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.32 %
cellular organisms	root	All Organisms → cellular organisms	42.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.32 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.32 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.75 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.64 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.32 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	23.57 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.64 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.32 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	21.66 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.64 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.32 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	21.66 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.64 %
Solimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Solimonas	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.32 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	18.47 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2.55 %
Solimonas soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Solimonas → Solimonas soli	0.64 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.32 %
Bradyrhizobium sp. NAS80.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	18.47 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2.55 %
Solimonas soli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Solimonas → Solimonas soli	0.64 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.64 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_11504180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	749	Open in IMG/M
3300001545\|JGI12630J15595_10093776	Not Available	590	Open in IMG/M
3300005165\|Ga0066869_10013381	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300005332\|Ga0066388_102776270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	894	Open in IMG/M
3300005332\|Ga0066388_104816247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	686	Open in IMG/M
3300005332\|Ga0066388_105169064	Not Available	662	Open in IMG/M
3300005332\|Ga0066388_106882274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	572	Open in IMG/M
3300005363\|Ga0008090_15730552	Not Available	700	Open in IMG/M
3300005406\|Ga0070703_10181212	Not Available	814	Open in IMG/M
3300005445\|Ga0070708_100733191	Not Available	929	Open in IMG/M
3300005450\|Ga0066682_10764065	Not Available	587	Open in IMG/M
3300005557\|Ga0066704_10321301	Not Available	1043	Open in IMG/M
3300005598\|Ga0066706_11386283	Not Available	530	Open in IMG/M
3300005713\|Ga0066905_100832819	Not Available	802	Open in IMG/M
3300005713\|Ga0066905_100897012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	775	Open in IMG/M
3300005713\|Ga0066905_101121946	Not Available	699	Open in IMG/M
3300005713\|Ga0066905_102225481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	511	Open in IMG/M
3300005764\|Ga0066903_102002880	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300005764\|Ga0066903_102865871	Not Available	935	Open in IMG/M
3300005764\|Ga0066903_105706933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	654	Open in IMG/M
3300005764\|Ga0066903_105850694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	645	Open in IMG/M
3300005764\|Ga0066903_105917223	Not Available	641	Open in IMG/M
3300006871\|Ga0075434_100461978	All Organisms → cellular organisms → Bacteria → Proteobacteria	1291	Open in IMG/M
3300009089\|Ga0099828_10485219	Not Available	1114	Open in IMG/M
3300009090\|Ga0099827_10408354	Not Available	1161	Open in IMG/M
3300010046\|Ga0126384_10207422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1556	Open in IMG/M
3300010046\|Ga0126384_11470072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	638	Open in IMG/M
3300010046\|Ga0126384_11598006	Not Available	614	Open in IMG/M
3300010046\|Ga0126384_12082220	Not Available	544	Open in IMG/M
3300010047\|Ga0126382_10154183	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300010359\|Ga0126376_11528560	Not Available	697	Open in IMG/M
3300010360\|Ga0126372_11581617	Not Available	694	Open in IMG/M
3300010366\|Ga0126379_13712274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	512	Open in IMG/M
3300010376\|Ga0126381_100498475	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300010376\|Ga0126381_102368040	Not Available	762	Open in IMG/M
3300010376\|Ga0126381_103984521	Not Available	575	Open in IMG/M
3300010398\|Ga0126383_10498872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Solimonas → Solimonas soli	1275	Open in IMG/M
3300010398\|Ga0126383_13109809	Not Available	542	Open in IMG/M
3300012180\|Ga0153974_1067413	Not Available	793	Open in IMG/M
3300012351\|Ga0137386_10199745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1436	Open in IMG/M
3300012356\|Ga0137371_11362925	Not Available	522	Open in IMG/M
3300012357\|Ga0137384_10895197	Not Available	715	Open in IMG/M
3300012361\|Ga0137360_11752374	Not Available	527	Open in IMG/M
3300012362\|Ga0137361_10448117	Not Available	1185	Open in IMG/M
3300012948\|Ga0126375_10187583	All Organisms → cellular organisms → Bacteria → Proteobacteria	1344	Open in IMG/M
3300016270\|Ga0182036_10264356	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300016270\|Ga0182036_10689196	Not Available	826	Open in IMG/M
3300016270\|Ga0182036_11149116	Not Available	644	Open in IMG/M
3300016294\|Ga0182041_10182592	All Organisms → cellular organisms → Bacteria → Proteobacteria	1654	Open in IMG/M
3300016294\|Ga0182041_10604222	Not Available	964	Open in IMG/M
3300016294\|Ga0182041_11861662	Not Available	559	Open in IMG/M
3300016319\|Ga0182033_10048954	All Organisms → cellular organisms → Bacteria	2847	Open in IMG/M
3300016319\|Ga0182033_10162860	All Organisms → cellular organisms → Bacteria → Proteobacteria	1736	Open in IMG/M
3300016319\|Ga0182033_10569004	Not Available	981	Open in IMG/M
3300016319\|Ga0182033_10620447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	941	Open in IMG/M
3300016341\|Ga0182035_10051806	All Organisms → cellular organisms → Bacteria → Proteobacteria	2790	Open in IMG/M
3300016357\|Ga0182032_10115983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1922	Open in IMG/M
3300016357\|Ga0182032_10116699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1917	Open in IMG/M
3300016357\|Ga0182032_10201185	All Organisms → cellular organisms → Bacteria → Proteobacteria	1516	Open in IMG/M
3300016357\|Ga0182032_10265901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	1340	Open in IMG/M
3300016357\|Ga0182032_11567279	Not Available	573	Open in IMG/M
3300016371\|Ga0182034_10479572	Not Available	1034	Open in IMG/M
3300016371\|Ga0182034_10688440	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	868	Open in IMG/M
3300016387\|Ga0182040_10936360	Not Available	720	Open in IMG/M
3300016387\|Ga0182040_11287420	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300016387\|Ga0182040_11894394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	511	Open in IMG/M
3300016422\|Ga0182039_10587618	Not Available	972	Open in IMG/M
3300016422\|Ga0182039_10672508	Not Available	911	Open in IMG/M
3300016445\|Ga0182038_11762514	Not Available	558	Open in IMG/M
3300018468\|Ga0066662_10853981	Not Available	889	Open in IMG/M
3300020580\|Ga0210403_11507153	Not Available	506	Open in IMG/M
3300021560\|Ga0126371_11947337	Not Available	706	Open in IMG/M
3300026317\|Ga0209154_1093616	Not Available	1285	Open in IMG/M
3300026551\|Ga0209648_10471331	Not Available	758	Open in IMG/M
3300027671\|Ga0209588_1031978	Not Available	1684	Open in IMG/M
3300027862\|Ga0209701_10125050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	1589	Open in IMG/M
3300027875\|Ga0209283_10323792	Not Available	1014	Open in IMG/M
3300027882\|Ga0209590_10353550	Not Available	947	Open in IMG/M
3300031543\|Ga0318516_10143820	Not Available	1368	Open in IMG/M
3300031543\|Ga0318516_10230084	Not Available	1072	Open in IMG/M
3300031543\|Ga0318516_10563167	Not Available	652	Open in IMG/M
3300031543\|Ga0318516_10800532	Not Available	532	Open in IMG/M
3300031545\|Ga0318541_10264733	Not Available	956	Open in IMG/M
3300031546\|Ga0318538_10024427	All Organisms → cellular organisms → Bacteria → Proteobacteria	2745	Open in IMG/M
3300031546\|Ga0318538_10506375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	654	Open in IMG/M
3300031572\|Ga0318515_10129910	Not Available	1335	Open in IMG/M
3300031573\|Ga0310915_10064349	All Organisms → cellular organisms → Bacteria → Proteobacteria	2400	Open in IMG/M
3300031573\|Ga0310915_10318011	Not Available	1101	Open in IMG/M
3300031573\|Ga0310915_10932652	Not Available	607	Open in IMG/M
3300031640\|Ga0318555_10191994	Not Available	1100	Open in IMG/M
3300031679\|Ga0318561_10373019	Not Available	783	Open in IMG/M
3300031682\|Ga0318560_10726185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	537	Open in IMG/M
3300031713\|Ga0318496_10071663	All Organisms → cellular organisms → Bacteria → Proteobacteria	1826	Open in IMG/M
3300031719\|Ga0306917_10368689	Not Available	1118	Open in IMG/M
3300031744\|Ga0306918_10129390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1840	Open in IMG/M
3300031744\|Ga0306918_11063457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	627	Open in IMG/M
3300031751\|Ga0318494_10501643	Not Available	707	Open in IMG/M
3300031768\|Ga0318509_10347379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	830	Open in IMG/M
3300031768\|Ga0318509_10672722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	575	Open in IMG/M
3300031781\|Ga0318547_10264517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	1039	Open in IMG/M
3300031781\|Ga0318547_10604009	Not Available	680	Open in IMG/M
3300031781\|Ga0318547_10884773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	557	Open in IMG/M
3300031793\|Ga0318548_10555658	Not Available	559	Open in IMG/M
3300031793\|Ga0318548_10581519	Not Available	545	Open in IMG/M
3300031794\|Ga0318503_10129517	Not Available	810	Open in IMG/M
3300031796\|Ga0318576_10433878	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300031798\|Ga0318523_10402849	Not Available	680	Open in IMG/M
3300031819\|Ga0318568_10156371	Not Available	1396	Open in IMG/M
3300031833\|Ga0310917_10610861	Not Available	740	Open in IMG/M
3300031845\|Ga0318511_10200237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	887	Open in IMG/M
3300031879\|Ga0306919_10047400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2824	Open in IMG/M
3300031879\|Ga0306919_10483059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	954	Open in IMG/M
3300031879\|Ga0306919_10699988	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300031880\|Ga0318544_10163629	Not Available	855	Open in IMG/M
3300031897\|Ga0318520_10233777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	1093	Open in IMG/M
3300031897\|Ga0318520_11059962	Not Available	513	Open in IMG/M
3300031910\|Ga0306923_10788477	Not Available	1050	Open in IMG/M
3300031910\|Ga0306923_11911362	Not Available	605	Open in IMG/M
3300031941\|Ga0310912_10878564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	690	Open in IMG/M
3300031941\|Ga0310912_11218837	Not Available	572	Open in IMG/M
3300031941\|Ga0310912_11456055	Not Available	516	Open in IMG/M
3300031942\|Ga0310916_11296600	Not Available	599	Open in IMG/M
3300031946\|Ga0310910_10140864	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300031947\|Ga0310909_10022204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4585	Open in IMG/M
3300031947\|Ga0310909_10188647	Not Available	1709	Open in IMG/M
3300031947\|Ga0310909_10429316	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300031954\|Ga0306926_11107433	Not Available	936	Open in IMG/M
3300031981\|Ga0318531_10031613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2177	Open in IMG/M
3300031981\|Ga0318531_10184634	Not Available	939	Open in IMG/M
3300031981\|Ga0318531_10473475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	567	Open in IMG/M
3300032001\|Ga0306922_10081417	All Organisms → cellular organisms → Bacteria → Proteobacteria	3400	Open in IMG/M
3300032001\|Ga0306922_10567307	All Organisms → cellular organisms → Bacteria	1205	Open in IMG/M
3300032035\|Ga0310911_10137042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	1370	Open in IMG/M
3300032035\|Ga0310911_10151005	Not Available	1306	Open in IMG/M
3300032035\|Ga0310911_10316028	Not Available	900	Open in IMG/M
3300032035\|Ga0310911_10431115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	763	Open in IMG/M
3300032042\|Ga0318545_10284244	Not Available	594	Open in IMG/M
3300032043\|Ga0318556_10528255	Not Available	617	Open in IMG/M
3300032051\|Ga0318532_10068125	Not Available	1237	Open in IMG/M
3300032051\|Ga0318532_10099962	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1022	Open in IMG/M
3300032059\|Ga0318533_10738566	Not Available	722	Open in IMG/M
3300032060\|Ga0318505_10629737	Not Available	504	Open in IMG/M
3300032063\|Ga0318504_10117419	Not Available	1205	Open in IMG/M
3300032063\|Ga0318504_10450238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	615	Open in IMG/M
3300032066\|Ga0318514_10129205	Not Available	1300	Open in IMG/M
3300032066\|Ga0318514_10744324	Not Available	521	Open in IMG/M
3300032076\|Ga0306924_10054252	All Organisms → cellular organisms → Bacteria → Proteobacteria	4433	Open in IMG/M
3300032076\|Ga0306924_11372959	Not Available	755	Open in IMG/M
3300032091\|Ga0318577_10275342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	806	Open in IMG/M
3300032091\|Ga0318577_10622428	Not Available	513	Open in IMG/M
3300032261\|Ga0306920_100304038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2375	Open in IMG/M
3300032261\|Ga0306920_101300182	Not Available	1046	Open in IMG/M
3300032261\|Ga0306920_101382853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	1009	Open in IMG/M
3300033289\|Ga0310914_10836134	Not Available	819	Open in IMG/M
3300033290\|Ga0318519_10891746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	549	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.73%
Host-Associated	Host-Associated	1.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.73%
Plants	Host-Associated → Plants	0.64%
Fungi	Host-Associated → Fungi	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.64%
Mycelium	Host-Associated → Fungi → Mycelium	0.64%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.53%
Loam	Environmental → Terrestrial → Soil → Loam	10.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.64%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	66.24%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.27%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.64%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.28%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.01%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.18%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.64%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.64%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.64%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_115041801	3300000789	Soil	MTTEELESGKRSPAAPASKPVRRRATLRKIGAAIAWFAGLGAILGGLAGYWSMYRTVRTELLAPAASKPMGSQFSIAVLP
JGI12630J15595_100937761	3300001545	Forest Soil	MIQINDWPATEPESDARASAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLTPAA
Ga0066869_100133813	3300005165	Soil	MIQINDWPASDPESDARAPAAPASNPVRRLAGLRKVGTAFAWFAGVGAILGGLTGYWSTYRTVTTE
Ga0066388_1027762701	3300005332	Tropical Forest Soil	MIQVNDLPVKEPELDAPPSAAPASKPVRRLAGVRRIGAAFAWFAGIGAILGGLTGYWSTYRTVTTEFLTPVASKPMASRFSIAVLPF
Ga0066388_1048162471	3300005332	Tropical Forest Soil	MTTEELESEKRSPAAPASKPVRRRATLRKIGAAIAWFAGVGAILGGLAGYWSMYRTVTTELLARAA
Ga0066388_1051690642	3300005332	Tropical Forest Soil	MTTEELESEKRSPAASASKPARRRATLRKIGAAIAWFAGVGAILGELAGYWSMYRTVTTELLAPAASKPMTSGPSIVVLPFTNTG
Ga0066388_1068822741	3300005332	Tropical Forest Soil	LTGLAMIQIAISLMPTEELESEKRSPAAPASKPVRRRAKLQKIGAVIAWFAGVGAILGGLAGYWSTYRTVTTELLAPA
Ga0008090_157305521	3300005363	Tropical Rainforest Soil	MIQANDLPAKEPESDARPSAAPVSKPVRRRAGVRRIGAAFAWFAGVGAILGGLTGYWSTYRTVTTE
Ga0070703_101812122	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MIQINDWPAREPESDARASAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLTPVASKPMA
Ga0070708_1007331911	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MIQINDWPATEPESDARASAAPASNPVRRLAGLRKIGTAFAWFAG
Ga0066682_107640651	3300005450	Soil	MIQINDWPAREPESDARPAAAPASNPVRRLAGLRKIGTAFAWFAGIGAI
Ga0066704_103213012	3300005557	Soil	MIQINDWPAREPESDARASAAPASNPVRRVAGLRKVGTAFAWFAGVGAILGGLTGYWSTYRTV
Ga0066706_113862832	3300005598	Soil	MIQINDWPAREPESDARPAAAPASNPVRRLAGLRKIGTAFAWFAGIGAILGGLTGYWSTY
Ga0066905_1008328192	3300005713	Tropical Forest Soil	MIQINDWPATEPESDARASAAPASNPVRRRAGLRKVGTAFAWFAGVGAILGGLTGYWSTY
Ga0066905_1008970122	3300005713	Tropical Forest Soil	MPTEGLESEKRSPAVPASKPVRRRVGLRRIGAAFAWLAGVGAILGGLTGYWSTYRTVTTELLTP
Ga0066905_1011219461	3300005713	Tropical Forest Soil	MIKINDLPAKEPESDARPSTAPASKPVRRVAGLRRIAAAFAWFAGVGAILGGLTGYWSTYRTVTTE
Ga0066905_1022254811	3300005713	Tropical Forest Soil	MPTEDLESEKRSRAAPASKPVRRLAGLRRIGAAFAWLAGVGAILGGLTGYWSTYRTVTTELLPPAASKPMASRFSI
Ga0066903_1020028801	3300005764	Tropical Forest Soil	MIQINNDLPAEELDSDARPSAAPASKPVRRLAGVRRVGAAFAWFAGIGAILGGLTGYWSTYRTVTTEFLTPVASKPMASRFSIAVLPF
Ga0066903_1028658711	3300005764	Tropical Forest Soil	MIQVNDLPVKEPELDARPSAAPASKPVRRLAGVRRIGAAFAWFAGIGAILGGLTGYWSTYRTVTTEFLT
Ga0066903_1057069331	3300005764	Tropical Forest Soil	MIQVNDLPVKEPELDAHLSAAPAAKPVRRLAGVRRIGAAFAWFAGIGAILGGLTGYWSTYRTVTTEFLT
Ga0066903_1058506941	3300005764	Tropical Forest Soil	MTTEELESEKRSPATPASKPVRRRATLRKIGAAIAWFAGVGAILGGLAGYWSMYRTVTTELLARAASEPM
Ga0066903_1059172232	3300005764	Tropical Forest Soil	MIQINDLSAKEPESDARPSAAPASKPVRRLAGLRRIGAAFAWFAGVG
Ga0075434_1004619781	3300006871	Populus Rhizosphere	MIQINDWPAREPESDARASAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRT
Ga0099828_104852191	3300009089	Vadose Zone Soil	MIQINDWPAREPESDARASAAPASNPVRRLAGLRKIGTAFAWFAGIGAILGGLTGYWSTY
Ga0099827_104083543	3300009090	Vadose Zone Soil	MIQINDWPAKEPESDARPSAAPASNPVRRLAGLRKVGTAFAWFAGVGAILGGL
Ga0126384_102074223	3300010046	Tropical Forest Soil	EELESEKRSPAAPASKPVRRRATLRKIGAAIAWFAGVGAILGGLAGYWSMYRTVTTELLAPATSKPRRQSR*
Ga0126384_114700722	3300010046	Tropical Forest Soil	MPTEDLESEKRSPAALASKPVRRLAGLRRIGAAFAWLAGVGAILGGLTGYWSTYRTVTTELLTPAASK
Ga0126384_115980061	3300010046	Tropical Forest Soil	MIQNSDLPKKAPDSEERPSAAPASKPVRRLAGLRKIGAACAWLAGVGAVLGGLTGYWSTYRTVTTELLTPAASK
Ga0126384_120822201	3300010046	Tropical Forest Soil	MMQNSGLPAKEPESEERPSAAPASKPVRRLAGLRRIGTAFAWLAGLGAI
Ga0126382_101541834	3300010047	Tropical Forest Soil	MMQNNDLPKKDSESVERPSATPASKPVRRLAGLRRIGTAFAWLAGLGAILGGLTGYWSTYRTVTTELLTPAAS
Ga0126376_115285601	3300010359	Tropical Forest Soil	MIQINDLPAKEPESDARPSAAPASKPVRRLAGLRRIGAAFAWFAGVGAILGGLTGYWSTY
Ga0126372_115816172	3300010360	Tropical Forest Soil	MIQVNDLPVKEPELDARPSAAPDSKPVRRLAGVRRIGAAFAWFAGIGAILGGLTGYWSTYRTVTTELLTPAAS
Ga0126379_137122741	3300010366	Tropical Forest Soil	MIQINNDLPAEELDSDTRPSAAPASKPVRRLAGLRRVGAGFAWFAGVGAILGGLTGYWSTYRTVTTELLTPAASTPMASRFSIAVL
Ga0126381_1004984751	3300010376	Tropical Forest Soil	MIQINDLPAKEPESDARPSAAPASKPVRRLAGLRRIGAAFAWFAGVGAILGGL
Ga0126381_1023680403	3300010376	Tropical Forest Soil	MIQVNDLPVKEQELDARPSAAPASKPVRRLAGVRRIGAAFAWFAGIGAILGGLTGYWSTYRTVTTEFL
Ga0126381_1039845211	3300010376	Tropical Forest Soil	MSQSNDLPAKEPESDARPSAAPASKPVRRLAGLRRIGAAFAWFAGVGAILGGLT
Ga0126383_104988723	3300010398	Tropical Forest Soil	MNKINDLPARELESDARPSAAPASKPVRRVAGLRRIGAAFVWFAGVGAILGGLTGYWSTY
Ga0126383_131098091	3300010398	Tropical Forest Soil	MIQTNDLPKTTPDSDARPSAAPASTPVRRLVGLRRIGAAFAWLAGVGAILGGLTGY
Ga0153974_10674131	3300012180	Attine Ant Fungus Gardens	MIRINDWPATEPESDARASAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLT
Ga0137386_101997453	3300012351	Vadose Zone Soil	MIQINDWPAREPESDARPAAAPASNPVRRLAGLRKIGTAFAWFAGIGAILGGLTGYWSTYRTVTT
Ga0137371_113629251	3300012356	Vadose Zone Soil	MIQINDWPAREPESDARPAAAPASNPVRRLAGLRKIGTAFAWFAGIGAILGGLTGYWSTYRTVTTELL
Ga0137384_108951972	3300012357	Vadose Zone Soil	MIQINDWPAREPESDARPAAAPASNPVRRLAGLRKIGTAFAWFAGIGAILGGLTGYWSTYRTVTTELLTPAASKPMAS
Ga0137360_117523741	3300012361	Vadose Zone Soil	MIQINDWPAREPESDARASAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLTPAASKPMASRF
Ga0137361_104481173	3300012362	Vadose Zone Soil	MIQINDWPAKEPESDARPSAAPASNPVRRLAGLRKVGTAFAWFAGVGAILGGLTGYSSTYRTVTTELLTPVASTPMASRFSIAV
Ga0126375_101875831	3300012948	Tropical Forest Soil	MIQINDLPAKEPESDARPSAAPASKPVRRLAGLRRIGAAFAWFAGVGAILGGLTGY
Ga0182036_102643563	3300016270	Soil	MPTEELESDKRSSAAPASKPAGRRATLQRIGTAIAWFAGVGAILGGLAGYWSTYRTVTTELFA
Ga0182036_106891962	3300016270	Soil	MPRKEPESDERPSAAQASKPVRCLAGLRRIGTAFAWLAGVGAILGGLTGYWSTYRTVTTELLPPAAS
Ga0182036_111491161	3300016270	Soil	MIQNSDLPKKAPDSEERPSAAPASKPVRRLAGLRKIGAACAWLAGVGAILGGLTGYWSTYRTVTTELLTPAASKPMASQFSIA
Ga0182041_101825923	3300016294	Soil	MIQINDWPATEPQSDARPSAAPASNPVRRLGGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTE
Ga0182041_106042222	3300016294	Soil	MPRKEPESDERPSAAQASKPVRCLAGLRRIGTAFAWLAGVGAILGGLTGYWSTYRTVT
Ga0182041_118616622	3300016294	Soil	MPTEDLESEKRSPAAPASKPVRRLVGSRGIGAAFAWLAGVGAILGGLTGYWSTYRTVTTELLTPAASKPMA
Ga0182033_100489541	3300016319	Soil	MPTEELESDKRSSAAPASKPAAGRRATLQKIGTAIAWFAGVGAILGGLAGYWSTYRTVTTELFALPAPKPMTSQPSIVVLPFTN
Ga0182033_101628601	3300016319	Soil	MIQINDWPATEPQSDARPSAAPASNPVRRLGGLRKIGTAFAWFAGVGAILGGLT
Ga0182033_105690041	3300016319	Soil	MIQINDWPATEPESDARASAAPASNPVRRLAGLRKIGTAFAW
Ga0182033_106204472	3300016319	Soil	MPTEELESEKRSTAAPAPKPVRRLAGLRRIGAAFAWLAGVGAILGGLTGYWSTYRTVTTELLTPAASKPMASRFSI
Ga0182035_100518064	3300016341	Soil	MIQINDWPATEPQSDARPSAAPASNPVRRLGGLRKIGTAFAWFAGVGAILGVWPGYGSTYRTAPTELLPPAASTPRAPRFSIP
Ga0182032_101159836	3300016357	Soil	MNKINDLPAKELESDARPSAAPASKPVRRVAGLRRIGAAFVWFAGVGAILGGLTGYWSTYRTVTTELLTPAASKP
Ga0182032_101166991	3300016357	Soil	MIQINDWPATEPESDARASAAPTSNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLTPAASRPMASRFSIAVLP
Ga0182032_102011852	3300016357	Soil	MIQINDWPATEPQSDARPSAAPASNPVRRLGGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELL
Ga0182032_102659011	3300016357	Soil	MPRKEPESDERPSAAQASKPVRCLAGLRRIGTAFAWLAGVGAILGGLTGYWSTYRTVTTELLPPAASKPMA
Ga0182032_115672791	3300016357	Soil	MSQSNDLPAKEPESDARPSAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWS
Ga0182034_104795721	3300016371	Soil	MIQINDWPATEPESDARASAAPTSNPVRRLAGLRKIGTAFAWFAGVGAILGGLTG
Ga0182034_106884401	3300016371	Soil	MPTEDLESEKRSPAAPASKPVRRLAGLRRIGAAFAWLAGVGAILGGLTGYWSTYRTVTTELLTPAASKPMATRFSI
Ga0182040_109363602	3300016387	Soil	MSQSNDLPAKEPESDARPSAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTE
Ga0182040_112874202	3300016387	Soil	MIQINDLPAKEPQSDARPSAAPASKPARRRAGLRRIGAAFAWFAGVGAILGGLTGYWSTYRTVTTEL
Ga0182040_118943941	3300016387	Soil	MPRKEPESDERPSAAQASKPVRCLAGLRRIGTAFAWLAGVGAILGGLTGYWSTYRTVTTELLPPAASKPMAS
Ga0182039_105876181	3300016422	Soil	MPRKEPESDERPSAAQASKPVRCLAGLRRIGTAFAWLAGVGAILGGLTGYWSTYRTVTTELLPPAASKP
Ga0182039_106725081	3300016422	Soil	MIQNSDLSKKAPDSEERPSAAPASKPVRRVAGLRKIGAACAWLAGVGAILGGLTGYWSTYRTVTTELLTPAASKPMAS
Ga0182038_117625141	3300016445	Soil	MIQNSDLPKKAPDSEERPSAAPASKPVRRLAGLRKIGAACAWLAGVGAILGGLTGYWSTYRTVTTELLTPAASKPMA
Ga0066662_108539811	3300018468	Grasslands Soil	MIQINDWPAREPESDARASAAPASNPVRRVAGLRKVGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLTPVAS
Ga0210403_115071532	3300020580	Soil	MIQINDWPANDPESDARASAAPASNPVRRLAGLRKIGTAFAWFAGVGA
Ga0126371_119473372	3300021560	Tropical Forest Soil	MIQINDWPATEPQSDTRSSAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLTPAASTPM
Ga0209154_10936161	3300026317	Soil	MIQINDWPAREPESDARPAAAPASNPVRRLAGLRKIGTAFAWFAGIGAILGGLTGYWSTYRTVTTELLTPAASKPMASRF
Ga0209648_104713311	3300026551	Grasslands Soil	MIQINDWPAREPESDARASAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGG
Ga0209588_10319781	3300027671	Vadose Zone Soil	MIQINDWPAREPESDARASAAPASNPVRRLAGLRKIGTAFAWF
Ga0209701_101250503	3300027862	Vadose Zone Soil	MIQINDWPAREPESDARASAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLTPVASTPMASRFSIAVLP
Ga0209283_103237921	3300027875	Vadose Zone Soil	MIQINDWPAREPESDARASAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTY
Ga0209590_103535503	3300027882	Vadose Zone Soil	MIQINDWPTTEPESHARASAAPASNPVRRLAGLRKIGTAFAWFAGIGAILGGLTGYWST
Ga0318516_101438202	3300031543	Soil	MIQNSDLPKKESESDERPSVTPASKPVRRLAGLRKVGAAFAWFAGVGAILGGLTGYWSTYRTVTTELLTPAASK
Ga0318516_102300841	3300031543	Soil	MPTEELESDKRSSAAPASKPAAGRRATLQKIGTAIAWFAGVGAILGGLAGYWSTYRTVTTEL
Ga0318516_105631672	3300031543	Soil	MIQINDWPATEPQSDARPSAAPASNPVRRLGGLRKIGTAFAWFAGVGAILGG
Ga0318516_108005322	3300031543	Soil	MIQINDWPATEPESDARASAAPTSNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLTPAA
Ga0318541_102647332	3300031545	Soil	MIQINDWPATEPESDARASAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGGL
Ga0318538_100244274	3300031546	Soil	MIQINDWPATEPQSDARPSAAPASNPVRRLGGLRKIGTAFAWFAGVGAILGGLTGYW
Ga0318538_105063751	3300031546	Soil	MPTEDLESEKRSPAAPASKPVRRLAGLRRIGAAFAWLAGVGAILGGLTGYWSTYRTVTTELLTPAASKPM
Ga0318515_101299102	3300031572	Soil	MIQNSDLPKKESESDERPSVTPASKPVRRLAGLRKVGAAFAWFAGVGAILGGLTGYWSTYRTVTTE
Ga0310915_100643491	3300031573	Soil	MIQINDWPATEPQSDARPSAAPASNPVRRLGGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTT
Ga0310915_103180111	3300031573	Soil	MNKINDLPAKELESDARPSAAPASKPVRRVAGLRRIGAAFVWFAGVGAILGGLTGYWSTYRTVTTELLTPAASKPMA
Ga0310915_109326521	3300031573	Soil	MSQSNDLPAKEPESDARPSAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTT
Ga0318555_101919942	3300031640	Soil	MIQNSDLPKKESESDERPSVTPASKPVRRLAGLRKVGAAFAWLAGVGAILGGLTGYWSTY
Ga0318561_103730191	3300031679	Soil	MNKINDLPAKELESDARPSAAPASKPVRRVAGLRRIGAAFVWFAGVGAILGGLTGYWSTYRTVTTELLTPTASKPMASRFSI
Ga0318560_107261852	3300031682	Soil	MPTEELESEKRSNAAPAPKPVRRLAGLRRIGAAFAWLAGVGAILGGLTGYWSTYRTVTTELLTPAASKPMASRFS
Ga0318496_100716631	3300031713	Soil	MIQINDWPATEPQSDARPSAAPASNPVRRLGGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLTPAASTPMASRF
Ga0306917_103686891	3300031719	Soil	MIKINDLPAKEPESDARPSTAPASKPVRRVAGLRRIAAAFAWFAGVGAILGGLTGYWSTYRTVTTELLTPAASKP
Ga0318493_102409062	3300031723	Soil	MPRKEPESDERPSAAQASKPVRCLAGLRRIGTAFAWLAGVGAILGGLTGYWSTYR
Ga0306918_101293901	3300031744	Soil	MIQINDWPATEPESDARASAAPTSNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTV
Ga0306918_110634571	3300031744	Soil	MPTEDLESEKRSPAAPASKPVRRLAGLRRIGAAFAWLAGVGAILGGLTGYWSTYRTVTTELLTPAASKPMAS
Ga0318494_105016432	3300031751	Soil	MIQNSYLPKKESESDERPSVTPASKPVRRLAGLRKVGAAFAWFAGVGAILGGLTGYW
Ga0318509_103473792	3300031768	Soil	MPTEDLESEKRSPAAPASKPVRRLAGLRRIGAAFAWLAGVGAILGGLTGYWSTYRTVTTELLTPAASKPMA
Ga0318509_106727221	3300031768	Soil	LTGLAMIQIAILLMPTEELESEKRSPAAPASKPVRRRAKLQKIGAVIAWFAGVGAILGGLAGYWSTYRTVTTELLAPAAPK
Ga0318547_102645172	3300031781	Soil	MPRKEPESDERPSAAQASKPVRCLAGLRRIGTAFAWLAGVGAILGGLTGYWSTYRTVTTELLPPAASKPMASRFSI
Ga0318547_106040091	3300031781	Soil	MIQINDWPATEPESDARASAAPTSNPVRRLAGLRKIGTAFAWFAGVGAILGGLT
Ga0318547_108847731	3300031781	Soil	MIQNSDLPKKAPDSEERPSAAPASKPVRRLAGLRKIGAACAWLAGVGAILGGLTGYWSTYRTVTTELLTPAASKPMATRFSIAVLP
Ga0318548_105556581	3300031793	Soil	MIQINDWPATEPQSDARPSAAPASNPVRRLGGLRKIGTAFAWF
Ga0318548_105815191	3300031793	Soil	MIQNSDLSKKAPDSEERPSAAPASKPVRRLAGLRKIGAACAWLAGVGAVLG
Ga0318503_101295171	3300031794	Soil	MIQINDWPATEPESDARASAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTY
Ga0318576_104338781	3300031796	Soil	MIQINDLPAKEPQSDARPSAAPASKPARRRAGLRRIGAAFAWFAGVGAILGGLTGYWSTYRTVTTELLPPA
Ga0318523_104028491	3300031798	Soil	MIQINDWPATEPQSDARPSAAPASKPVRRVAGLRRIGAAFVWFAGVGAILGGLTGYWSTYRT
Ga0318568_101563711	3300031819	Soil	MNKINDLPAKELESDARPSAAPASKPVRRVAGLRRIGAAFVWFAGVGAILGGLTGYWSTYRTVTTELLTPTAPMASRFSIAV
Ga0318568_103047773	3300031819	Soil	MPRKEPESDERPSAAQASKPVRCLAGLRRIGTAFAWLAGVGAILGGLTGYWST
Ga0310917_106108612	3300031833	Soil	MIQINDWPATEPESDARASAAPTSNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLTPAASKPMASQ
Ga0318511_102002371	3300031845	Soil	MPTEELESEKRSTAAPTSKPVRRLAGLRRIGAAFAWLAGVGAILGGLTGYWSTYRTVTTELLTPAASK
Ga0306919_100474001	3300031879	Soil	MPTEELESDKRSSAAPASKPAGRRATLQRIGTAIAWFAGVGAILGGLAGYWSTYRAVTTE
Ga0306919_104830591	3300031879	Soil	MPTEDLESEKRSPAAPASKPVRRLAGLRRIGAAFAWLAGVGAILGGLTGYWSTYRTVTTELLTPAASKPMATRFSIAVLP
Ga0306919_106999881	3300031879	Soil	MIQINDWPARESESDARASAAPASKPVRRLAGLRRIGAAFAWFAGVGAIL
Ga0318544_101636292	3300031880	Soil	MIQINDWPATEPQSDARPSAAPASNPVRRLGGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLTP
Ga0318520_102337771	3300031897	Soil	MIQINDWPATEPQSDARPSAAPASNPVRRLGGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLTPAASKPMASRFSIAVLP
Ga0318520_110599621	3300031897	Soil	MSQSNDLPAKEPESDARPSAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTY
Ga0306923_107884773	3300031910	Soil	MIQINDLPAKEPESDARPSAAPASKPVRRLAGLRRIGAAFAWFAGVGAILGGLTGYWSTYRTVTTELLPPA
Ga0306923_119113621	3300031910	Soil	MSQSNDLPAKEPESDARPSAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTEL
Ga0310912_108785641	3300031941	Soil	MPTEDLESEKRSPAAPASKPVRRLAGLRRIGAAFAWLAGVGAILGGLTGYWSTYRTVTTELLTPAASKPMATRFS
Ga0310912_112188371	3300031941	Soil	MSQSNDLPAKEPESDARPSAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLTPVASTPMASRFSIAV
Ga0310912_114560551	3300031941	Soil	MIQNSDLPKKVPDSEERPSAAPASKPVRRLAGLRKIGAACAWLAGVGAILGGLTGYWSTYRT
Ga0310916_112966001	3300031942	Soil	MSQSNDLPAKEPESDARPSAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLTPVASTP
Ga0310910_101408641	3300031946	Soil	MIQNSDLPKKAPDSEERPSAAPASKPVRRLAGLRKIGAACAWLAGVGAILGGLTGYWST
Ga0310909_100222044	3300031947	Soil	MPRKEPESDERPSAAQASKPVRCLAGLRRIGTAFAWLAGVGAILGGLTGYWSTYRTVTTELLPPAASKPMASRF
Ga0310909_101886471	3300031947	Soil	MIQINDWPATEPESDARASAAPTSNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTEL
Ga0310909_104293164	3300031947	Soil	MNKINDLPAKELESDARPSAAPASKPVRRVAGLRRIGAAFVWFAGVGAILGGL
Ga0306926_111074331	3300031954	Soil	MIQINDWPAREPESDARASAAPASNPVRRVAGLRKIGTAFAWF
Ga0318531_100316131	3300031981	Soil	MIQNSDLPKKESESDERPSVTPASKPVRRLAGLRKVGAAFAWLAGVGAI
Ga0318531_101846341	3300031981	Soil	MIQINDWPATEPQSDARPSAAPASNPVRRLGGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLT
Ga0318531_104734752	3300031981	Soil	MPTEELESEKRSTAAPAPKPVRRLAGLRRIGAAFAWLAGVGAILGGLTGYWSTYRTVTTELLPPAASTP
Ga0306922_100814174	3300032001	Soil	MIQINDWPATEPQSDARPSAAPASNPVRRLGGLRKIGTAFAWFAGVGAI
Ga0306922_105673074	3300032001	Soil	MNKINDLPAKELESDARPSAAPASKPVRRVAGLRRIGAAFVWFAGVGAILGGLTGYWSTYRTVTTELLTPAASKPM
Ga0310911_101370421	3300032035	Soil	MIQINDWPATEPESDARASAAPTSNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLTPAASKPTASRFSIAVLP
Ga0310911_101510051	3300032035	Soil	MIQNSDLPKKESESDERPSVTPASKPVRRLAGLRKVGAAFAWLAGVGAILGGLTGYWSTYRTVTTE
Ga0310911_103160281	3300032035	Soil	MIQNSDLPKKAPDSEERPSAAPASKPVRRLAGLRKIGAACAWLAGVGAILGGLTGYWSTYRTVTTELLTPAASKPMASQFS
Ga0310911_104311151	3300032035	Soil	MIQIAILLMPTEELESEKRSPAAPASKPVRRRAKLQKIGAVIAWFAGVGAILGGLAGYWSTYRTVTTELLAPAGPKPMTSGP
Ga0318545_102842441	3300032042	Soil	MIQINDWPATEPQSDARPSAAPASNPVRRLGGLRKIGTAFAWFSG
Ga0318556_105282551	3300032043	Soil	MIQINDWPATEPQSDARPSAAPASNPVRRLGGLRKIGTAFAWFAGVGAILGGLTGYWSTY
Ga0318532_100681251	3300032051	Soil	MIQNSDLPKKESESDERPSVTPASKPVRRLAGLRKVGAAFAWLAGVGAILGGLTGYWSTYRTVTTELLT
Ga0318532_100999623	3300032051	Soil	MPTEELESEKRSTAAPTSKPVRRLAGLRRIGAAFAWLAGVGAILGGLTGYWSTYRTVTTELLPPAASTPM
Ga0318533_107385661	3300032059	Soil	MSQSNDLPAKEPESDARPSAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLTPV
Ga0318505_106297372	3300032060	Soil	MIQINDWPATEPESDARASAAPASNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYW
Ga0318504_101174192	3300032063	Soil	MIQNSDLPKKESESDERPSVTPASKPVRRLAGLRKVGAAFAWFAGVGAILGGLTGYWSTYRT
Ga0318504_104502381	3300032063	Soil	MPTEELESDKRSSAAPASKPAAGRRATLQKIGTAIAWFAGVGAILGGLAGYWSTYRTVTTELFALPAPKPMTSQ
Ga0318514_101292052	3300032066	Soil	MIQNSDLPKKESESDERPSVTPASKPVRRLAGLRKVGAAFAWFAGVGAILGGLTGYW
Ga0318514_107443241	3300032066	Soil	MIQINDWPATEPQSDARPSAAPASNPVRRLGGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTV
Ga0306924_100542529	3300032076	Soil	MIQINDWPATEPESDARASAAPTSNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLTPAASKPTAS
Ga0306924_113729592	3300032076	Soil	MIQINDLPAKEPESDVRPSAAPASKPVRRLAGLRRIGAAFAWFAGVGAILGGLTG
Ga0318577_102753421	3300032091	Soil	MPTEELESDKRSSAAPASKPAGRRATLQRIGTAIAWFAGVGAILGGLAGYWSTYRTVTTELLAPPAPKPMTSQPSIVVLPFTNVGGASSS
Ga0318577_106224282	3300032091	Soil	MPTEDLESEKRSPAAPASKPVRRLVGSRGIGAAFAWLAGVGAILGGLTGYWSTYRTVTTELLPPAASKPMASRF
Ga0306920_1003040381	3300032261	Soil	MIQINDWPATEPESDARASAAPTSNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLTPAASKPTA
Ga0306920_1013001821	3300032261	Soil	MIKINDLPAKEPESDARPSTAPASKPVRRVAGLRRIAAAFAWFAGVGAILGDHYRLLRSP
Ga0306920_1013828533	3300032261	Soil	MPTEDLESEKRSPAAPASKPVRRLVGLRRIGAAFAWLAGVGAILGGLTGYWSTYRTVTTELLTPAASKP
Ga0310914_108361342	3300033289	Soil	MIQINDWPATEPESDARASAAPTSNPVRRLAGLRKIGTAFAWFAGVGAILGGLTGYWSTYRTVTTELLT
Ga0318519_108917461	3300033290	Soil	MPTEELESDKRSSAAPASKPAGRRATLQRIGTAIAWFAGVGAILGGLAGYWSTYRTVTTELLAPPAPKPMTSQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042776

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences