Metagenome / Metatranscriptome Family F042230

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042230
Family Type	Metagenome / Metatranscriptome
Number of Sequences	158
Average Sequence Length	45 residues
Representative Sequence	MISSSRSMLYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETI
Number of Associated Samples	123
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	79.11 %
% of genes near scaffold ends (potentially truncated)	97.47 %
% of genes from short scaffolds (< 2000 bps)	93.67 %
Associated GOLD sequencing projects	115
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.519 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.937 % of family members)
Environment Ontology (ENVO)	Unclassified (45.570 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.899 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF13489	Methyltransf_23	12.03
PF00903	Glyoxalase	8.23
PF02353	CMAS	6.96
PF03795	YCII	1.27
PF00313	CSD	1.27
PF00072	Response_reg	0.63
PF12832	MFS_1_like	0.63
PF01979	Amidohydro_1	0.63
PF12802	MarR_2	0.63
PF01636	APH	0.63
PF07992	Pyr_redox_2	0.63
PF13565	HTH_32	0.63
PF13701	DDE_Tnp_1_4	0.63
PF01609	DDE_Tnp_1	0.63
PF11154	DUF2934	0.63
PF08242	Methyltransf_12	0.63
PF00355	Rieske	0.63
PF00144	Beta-lactamase	0.63
PF13358	DDE_3	0.63
PF13924	Lipocalin_5	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	6.96
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	6.96
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	6.96
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.27
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.63
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.63
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.63
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.63
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.63
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.63
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.63
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.63
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.52 %
Unclassified	root	N/A	28.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.52 %
Unclassified	root	N/A	28.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.52 %
Unclassified	root	N/A	28.48 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	52.53 %
Unclassified	root	N/A	28.48 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	44.30 %
Unclassified	root	N/A	28.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.48 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	21.52 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	5.06 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	1.27 %
alpha proteobacterium BAL199	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199	0.63 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.63 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.89 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	4.43 %
Bosea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea	1.27 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.63 %
alpha proteobacterium BAL199	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199	0.63 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.89 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	4.43 %
unclassified Bosea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea	1.27 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.63 %
alpha proteobacterium BAL199	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199	0.63 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.48 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.89 %
Methylobacterium sp. 174MFSha1.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 174MFSha1.1	3.80 %
Bosea sp. Root670	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. Root670	1.27 %
Methylobacterium sp. ap11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. ap11	0.63 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.63 %
alpha proteobacterium BAL199	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199	0.63 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q01B0KPQ	Not Available	550	Open in IMG/M
3300001545\|JGI12630J15595_10007656	All Organisms → cellular organisms → Bacteria → Proteobacteria	2340	Open in IMG/M
3300002245\|JGIcombinedJ26739_101855497	Not Available	504	Open in IMG/M
3300004092\|Ga0062389_104807023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 174MFSha1.1	509	Open in IMG/M
3300005435\|Ga0070714_100816439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 174MFSha1.1	903	Open in IMG/M
3300005435\|Ga0070714_101057463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 174MFSha1.1	790	Open in IMG/M
3300005435\|Ga0070714_101086605	All Organisms → cellular organisms → Bacteria → Proteobacteria	779	Open in IMG/M
3300005447\|Ga0066689_10758895	Not Available	604	Open in IMG/M
3300005546\|Ga0070696_101347069	Not Available	607	Open in IMG/M
3300005719\|Ga0068861_102537092	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300005764\|Ga0066903_105893921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	643	Open in IMG/M
3300005764\|Ga0066903_106256096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	622	Open in IMG/M
3300005841\|Ga0068863_102357338	All Organisms → cellular organisms → Bacteria → Proteobacteria	542	Open in IMG/M
3300006797\|Ga0066659_10977761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. ap11	707	Open in IMG/M
3300009137\|Ga0066709_104595100	Not Available	505	Open in IMG/M
3300009792\|Ga0126374_10021970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2816	Open in IMG/M
3300010048\|Ga0126373_11703914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	694	Open in IMG/M
3300010359\|Ga0126376_12984180	Not Available	523	Open in IMG/M
3300010366\|Ga0126379_11584110	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300011106\|Ga0151489_1037125	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300012203\|Ga0137399_10624484	Not Available	906	Open in IMG/M
3300012208\|Ga0137376_11226220	Not Available	640	Open in IMG/M
3300012211\|Ga0137377_11634053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 174MFSha1.1	567	Open in IMG/M
3300012362\|Ga0137361_10656944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	959	Open in IMG/M
3300012923\|Ga0137359_10321421	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300012925\|Ga0137419_11935534	Not Available	506	Open in IMG/M
3300012927\|Ga0137416_12166586	Not Available	511	Open in IMG/M
3300012930\|Ga0137407_10278937	All Organisms → cellular organisms → Bacteria → Proteobacteria	1523	Open in IMG/M
3300016294\|Ga0182041_11824259	Not Available	564	Open in IMG/M
3300016341\|Ga0182035_11529550	Not Available	601	Open in IMG/M
3300016357\|Ga0182032_11395931	Not Available	606	Open in IMG/M
3300016387\|Ga0182040_10336458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1166	Open in IMG/M
3300016387\|Ga0182040_10519274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	954	Open in IMG/M
3300016387\|Ga0182040_10604514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	888	Open in IMG/M
3300016404\|Ga0182037_10178683	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300016422\|Ga0182039_10862806	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300016422\|Ga0182039_10907605	Not Available	787	Open in IMG/M
3300016422\|Ga0182039_10960501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	765	Open in IMG/M
3300016445\|Ga0182038_10620212	Not Available	935	Open in IMG/M
3300016445\|Ga0182038_11074493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	715	Open in IMG/M
3300020579\|Ga0210407_10482033	Not Available	969	Open in IMG/M
3300020579\|Ga0210407_11013854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	632	Open in IMG/M
3300020580\|Ga0210403_10212282	All Organisms → cellular organisms → Bacteria → Proteobacteria	1588	Open in IMG/M
3300020580\|Ga0210403_11026291	Not Available	644	Open in IMG/M
3300021088\|Ga0210404_10094512	All Organisms → cellular organisms → Bacteria → Proteobacteria	1496	Open in IMG/M
3300021170\|Ga0210400_10623340	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300021171\|Ga0210405_10144379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1883	Open in IMG/M
3300021178\|Ga0210408_10704249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	795	Open in IMG/M
3300021178\|Ga0210408_10981217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	654	Open in IMG/M
3300021180\|Ga0210396_11316523	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300021402\|Ga0210385_10452881	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300021404\|Ga0210389_11198653	Not Available	584	Open in IMG/M
3300021406\|Ga0210386_10515416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1033	Open in IMG/M
3300021406\|Ga0210386_11233566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. Root670	631	Open in IMG/M
3300021420\|Ga0210394_10261969	Not Available	1513	Open in IMG/M
3300021420\|Ga0210394_11322011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	615	Open in IMG/M
3300021475\|Ga0210392_11020328	Not Available	620	Open in IMG/M
3300021479\|Ga0210410_10669081	Not Available	918	Open in IMG/M
3300021559\|Ga0210409_10372034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1282	Open in IMG/M
3300021560\|Ga0126371_12651859	Not Available	607	Open in IMG/M
3300022532\|Ga0242655_10116872	Not Available	750	Open in IMG/M
3300022557\|Ga0212123_10840894	Not Available	547	Open in IMG/M
3300023046\|Ga0233356_1029601	All Organisms → cellular organisms → Bacteria → Proteobacteria	658	Open in IMG/M
3300025915\|Ga0207693_11146320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	589	Open in IMG/M
3300025929\|Ga0207664_10736993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 174MFSha1.1	886	Open in IMG/M
3300026356\|Ga0257150_1027532	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300026494\|Ga0257159_1080409	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300026508\|Ga0257161_1090218	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300026527\|Ga0209059_1282854	Not Available	560	Open in IMG/M
3300026555\|Ga0179593_1113387	All Organisms → cellular organisms → Bacteria	4286	Open in IMG/M
3300027070\|Ga0208365_1006129	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1451	Open in IMG/M
3300027090\|Ga0208604_1017696	Not Available	676	Open in IMG/M
3300027173\|Ga0208097_1000244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3590	Open in IMG/M
3300027173\|Ga0208097_1012162	Not Available	944	Open in IMG/M
3300027174\|Ga0207948_1031277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	637	Open in IMG/M
3300027521\|Ga0209524_1086868	Not Available	657	Open in IMG/M
3300027576\|Ga0209003_1085306	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300027610\|Ga0209528_1064597	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300027635\|Ga0209625_1017837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1567	Open in IMG/M
3300027643\|Ga0209076_1094102	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300027674\|Ga0209118_1186789	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300027855\|Ga0209693_10158764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1116	Open in IMG/M
3300028047\|Ga0209526_10058231	All Organisms → cellular organisms → Bacteria	2720	Open in IMG/M
3300028047\|Ga0209526_10548837	Not Available	747	Open in IMG/M
3300028047\|Ga0209526_10947207	Not Available	519	Open in IMG/M
3300030842\|Ga0075404_10953581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → alpha proteobacterium BAL199	846	Open in IMG/M
3300031122\|Ga0170822_14598928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1219	Open in IMG/M
3300031231\|Ga0170824_107860978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	593	Open in IMG/M
3300031231\|Ga0170824_114095462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1057	Open in IMG/M
3300031231\|Ga0170824_115052001	Not Available	781	Open in IMG/M
3300031231\|Ga0170824_124406999	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300031543\|Ga0318516_10349270	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300031546\|Ga0318538_10415362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. Root670	728	Open in IMG/M
3300031561\|Ga0318528_10231511	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300031564\|Ga0318573_10155122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1202	Open in IMG/M
3300031590\|Ga0307483_1032601	Not Available	553	Open in IMG/M
3300031680\|Ga0318574_10024322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2994	Open in IMG/M
3300031681\|Ga0318572_10471459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	747	Open in IMG/M
3300031681\|Ga0318572_10627062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300031682\|Ga0318560_10388027	Not Available	755	Open in IMG/M
3300031708\|Ga0310686_100573802	Not Available	523	Open in IMG/M
3300031718\|Ga0307474_11556421	Not Available	520	Open in IMG/M
3300031719\|Ga0306917_10245294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1371	Open in IMG/M
3300031744\|Ga0306918_10091824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2139	Open in IMG/M
3300031748\|Ga0318492_10185491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1060	Open in IMG/M
3300031751\|Ga0318494_10290461	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300031753\|Ga0307477_10266438	Not Available	1186	Open in IMG/M
3300031763\|Ga0318537_10067931	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300031765\|Ga0318554_10423080	Not Available	755	Open in IMG/M
3300031777\|Ga0318543_10067431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1493	Open in IMG/M
3300031777\|Ga0318543_10225233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	834	Open in IMG/M
3300031779\|Ga0318566_10293245	All Organisms → cellular organisms → Bacteria → Proteobacteria	805	Open in IMG/M
3300031781\|Ga0318547_10365754	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300031794\|Ga0318503_10024000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1744	Open in IMG/M
3300031795\|Ga0318557_10035835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2030	Open in IMG/M
3300031805\|Ga0318497_10162915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1225	Open in IMG/M
3300031832\|Ga0318499_10390995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300031846\|Ga0318512_10051330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1842	Open in IMG/M
3300031846\|Ga0318512_10140039	Not Available	1162	Open in IMG/M
3300031859\|Ga0318527_10224659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	797	Open in IMG/M
3300031879\|Ga0306919_10542164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	897	Open in IMG/M
3300031890\|Ga0306925_10747899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1019	Open in IMG/M
3300031896\|Ga0318551_10401096	Not Available	780	Open in IMG/M
3300031897\|Ga0318520_11010345	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300031910\|Ga0306923_10290265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1869	Open in IMG/M
3300031910\|Ga0306923_11506697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	703	Open in IMG/M
3300031912\|Ga0306921_10752487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1116	Open in IMG/M
3300031912\|Ga0306921_11740747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300031942\|Ga0310916_11539595	Not Available	541	Open in IMG/M
3300031945\|Ga0310913_10477449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	885	Open in IMG/M
3300031945\|Ga0310913_10576158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	798	Open in IMG/M
3300031946\|Ga0310910_10026239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3903	Open in IMG/M
3300031946\|Ga0310910_10102561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2126	Open in IMG/M
3300031946\|Ga0310910_10461237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1008	Open in IMG/M
3300031946\|Ga0310910_11566011	Not Available	504	Open in IMG/M
3300031947\|Ga0310909_10873556	Not Available	739	Open in IMG/M
3300031954\|Ga0306926_10616700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1323	Open in IMG/M
3300031954\|Ga0306926_11815952	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	691	Open in IMG/M
3300031954\|Ga0306926_12071985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. 174MFSha1.1	638	Open in IMG/M
3300032039\|Ga0318559_10080353	All Organisms → cellular organisms → Bacteria → Proteobacteria	1419	Open in IMG/M
3300032039\|Ga0318559_10084978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1383	Open in IMG/M
3300032039\|Ga0318559_10217143	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300032042\|Ga0318545_10279587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300032043\|Ga0318556_10197406	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300032044\|Ga0318558_10344308	Not Available	739	Open in IMG/M
3300032059\|Ga0318533_10188467	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300032059\|Ga0318533_10209666	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300032060\|Ga0318505_10118751	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300032060\|Ga0318505_10449495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	609	Open in IMG/M
3300032063\|Ga0318504_10198880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	935	Open in IMG/M
3300032076\|Ga0306924_10381704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1614	Open in IMG/M
3300032091\|Ga0318577_10054330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1805	Open in IMG/M
3300032094\|Ga0318540_10331181	All Organisms → cellular organisms → Bacteria → Proteobacteria	735	Open in IMG/M
3300032180\|Ga0307471_101010538	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300032205\|Ga0307472_102271895	Not Available	548	Open in IMG/M
3300032261\|Ga0306920_101609781	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300032261\|Ga0306920_102380708	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300032515\|Ga0348332_10391031	Not Available	716	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.73%
Host-Associated	Host-Associated	1.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.47%
Aquatic	Environmental → Aquatic	1.27%
Plants	Host-Associated → Plants	1.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.27%
Freshwater	Environmental → Aquatic → Freshwater	0.63%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.63%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.65%
Loam	Environmental → Terrestrial → Soil → Loam	15.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.27%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.63%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.63%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	67.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.63%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.63%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.49%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.16%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.16%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.27%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.63%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.63%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.63%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300023046	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300030842	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB3 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_02066750	2170459005	Grass Soil	MISSSRSTLYRFLSLYAALYAGFGVQSPYLPILLDSRHLSP
JGI12630J15595_100076561	3300001545	Forest Soil	MLYRFFILYGSLYAGFGVQSPYLPILLDNHHLRPETIGLALA
JGIcombinedJ26739_1018554972	3300002245	Forest Soil	MISSSRSTLYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPE
Ga0062389_1048070231	3300004092	Bog Forest Soil	MISSSRSVLYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETI
Ga0070714_1008164391	3300005435	Agricultural Soil	MISSSRSMLYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETI
Ga0070714_1010574631	3300005435	Agricultural Soil	MISSSRSILYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETI
Ga0070714_1010866052	3300005435	Agricultural Soil	MHLSSSRSMLYRFFILYGSLYAGFGVQSPYLPILLDNHHLRP
Ga0066689_107588951	3300005447	Soil	MISSSRSMLYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETIALALAAG
Ga0070696_1013470691	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MLYRFLILYGSLYAGFGVQSPYLPILLDDRHLRPETIALALAAGTAMRLMAAQAVAR
Ga0068861_1025370921	3300005719	Switchgrass Rhizosphere	MISSSRSTLYRFLSLYAALYAGFGVQSPYLPILLDTR
Ga0066903_1058939212	3300005764	Tropical Forest Soil	MADPCHSAVWRLLALYGALYVGFGVQSPYLPSLLDSRNLPAEAIAMVLAAG
Ga0066903_1062560961	3300005764	Tropical Forest Soil	MISSSRSTLYRFLSLYAAVYAGFGVQSPYLPILLDSRHLSP
Ga0068863_1023573381	3300005841	Switchgrass Rhizosphere	MISSSRSTLYRFLSLYAALYAGFGVQSPYLPILLDTRHLSPETI
Ga0066659_109777611	3300006797	Soil	MLFRFLILYGLLYAGFGVQSPYLPILLDNRHLRPETIALALAAGTAMR
Ga0066709_1045951001	3300009137	Grasslands Soil	MLYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETIALALAAGTAMRL
Ga0126374_100219701	3300009792	Tropical Forest Soil	MLYRFFILYGSLYAGFGVQSPYLPILLDNHHLRPETI
Ga0126373_117039142	3300010048	Tropical Forest Soil	MISSSRSILYRFLVLYGSLYAGFGVQSPYLPILLDNHHLRP
Ga0126376_129841801	3300010359	Tropical Forest Soil	MISSSRSVLYRFLILYGSLYAGFGVQSPYLPILLDNRHL
Ga0126379_115841101	3300010366	Tropical Forest Soil	MLYRFFILYGSLYAGFGVQSPYLPILLDNHHLRPETIGLA
Ga0151489_10371252	3300011106	Soil	LLYAGFGVQSPYLPILLDNRHLRPETIALALAAGTAMRLTAVKQ*
Ga0137399_106244841	3300012203	Vadose Zone Soil	MISFSRSMLYRFLILYGLLYAGFGVQSPYLPILLDNRHLRPETI
Ga0137376_112262202	3300012208	Vadose Zone Soil	MISSSRSILYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETIALALAAG
Ga0137377_116340531	3300012211	Vadose Zone Soil	MISSSRSILYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETIALALAAGTAMRLMA
Ga0137361_106569442	3300012362	Vadose Zone Soil	MLYRFFILYGSLYAGFGVQSPYLPILLDNRHLRPETIAL
Ga0137359_103214212	3300012923	Vadose Zone Soil	MLYRFLILYGLLYAGFGVQSPYLPILLDNRHLRPETIALALAAGTAMRLM
Ga0137419_119355342	3300012925	Vadose Zone Soil	MLYRFLILYALLYAGFGVQSPYLPILLDNRHLRPETIALALA
Ga0137416_121665861	3300012927	Vadose Zone Soil	MISFSRSMLYRFLILYALLYAGFGVQSPYLPILLDNRHLRPETI
Ga0137407_102789372	3300012930	Vadose Zone Soil	MLYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETIALALAAGTAMRLMA
Ga0182041_118242591	3300016294	Soil	MISSSRSVLYRFLILYGLLYAGFGVQSPYLPILLD
Ga0182035_115295502	3300016341	Soil	MISSSRSVLYRFLILYGLLYAWFGVQSPYLPILLDNRHLRAETIALALAAG
Ga0182032_113959313	3300016357	Soil	MISSSRSILYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETIALALAAGTAMRLM
Ga0182040_103364582	3300016387	Soil	MISFSRSILYRFLSLYATLYAGFGVQSPYLPILLDNRH
Ga0182040_105192741	3300016387	Soil	MISSSRSTLYRFLSLYAALYAGFGVQSPYLPILLDDR
Ga0182040_106045142	3300016387	Soil	MISSSRSILYRFLSLYATLYAGFGVQSPYLPILLDNRHLSPETIALALA
Ga0182037_101786831	3300016404	Soil	MISSSRSVLYRFLILYGSLYAGFGVQSPYLPILLDNRHLHAETIALALACATAMR
Ga0182039_108628062	3300016422	Soil	MLYRFLILYGLLYAGFGVQSPYLPILLDNRHLRPE
Ga0182039_109076051	3300016422	Soil	MISSSRSVLYRFLILYGLLYAWFGVQSPYLPILLDNRHLRAETIALALAAGMAMRLMAAQAVA
Ga0182039_109605012	3300016422	Soil	MISSSSSMLYRFLLLDGLLYAGFGVQSPYLPILLDNRHLR
Ga0182038_106202121	3300016445	Soil	MISSSRSILYRFLILYGSLYAGFGVQSPYLPILLDNRHLPPETI
Ga0182038_110744931	3300016445	Soil	MISSSRSVLYRFLILYGSLYAGFGVQSPYLPILLDNRHLPPETIA
Ga0210407_104820331	3300020579	Soil	MLCRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETIALALA
Ga0210407_110138542	3300020579	Soil	MISSSRSMLYRFLILYGLLYAGFGVQSPYLPILLDNRHL
Ga0210403_102122821	3300020580	Soil	MHLSSSRSMLYRFFILYGSLYAGFGVQSPYLPILLDNHHLRPETLGL
Ga0210403_110262911	3300020580	Soil	MISSLRSMLYRFLILYGLLYAGFGVQSPYLPILLDNRHLRP
Ga0210404_100945123	3300021088	Soil	MHLSSSRSMLYRFFILYGSLYAGFGVQSPYLPILLD
Ga0210400_106233401	3300021170	Soil	MISSSRSTLYRFLSLYAALYAGFGVQSPYLPILLDNRHLSPEMLRWR
Ga0210405_101443793	3300021171	Soil	MISSSRSMLYRFFILYGSLYAGFGVQSPYLPILLDNRHL
Ga0210408_107042491	3300021178	Soil	MLYRFLILYSLLYAGFGVQSPYLPILLDNRHLRPETIALA
Ga0210408_109812171	3300021178	Soil	MLYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETIALALAAGTA
Ga0210396_113165232	3300021180	Soil	MRMHLSSSRSMLYRFFILYGSLYAGFGVQSPYLPILLDNHHLRPET
Ga0210385_104528811	3300021402	Soil	MLYRFFILYGSLYAGFGVQSPYLPILLDNRHLRPETI
Ga0210389_111986531	3300021404	Soil	MISSSRSMLYRFLILYGLLYAGFGVQSPYLPILLDNRHLRP
Ga0210386_105154163	3300021406	Soil	MISSSRSMLYRFLILYGLLYAGFGVQSPYLPILLDNRHLRPE
Ga0210386_112335661	3300021406	Soil	MISSSRSTLYRFLILYGLLYAGFGVQSPYLPILLDNRRLDPEMIALALAAGTAMRLMA
Ga0210394_102619693	3300021420	Soil	MLCRFLILYGSLYAGFGVQSPYLPILLDNRHLRPE
Ga0210394_113220111	3300021420	Soil	MISSSRSMLYRFLILYGLLYAGFGVQSPYLPILLDNRH
Ga0210392_110203281	3300021475	Soil	MISSSRSTLYRFLILYGLLYAGFGVQSPYLPILLDNRRL
Ga0210410_106690811	3300021479	Soil	MISSSRSMLCRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETIALALAAGTAMRLMAAQAV
Ga0210409_103720341	3300021559	Soil	MISSSRSVLYRFLILYGSLYAGFGVQSPYLPILLDNRHLPPETIALALAAGTA
Ga0126371_126518591	3300021560	Tropical Forest Soil	MISSSRSILCRFLILYGSLYAGFGVQSPYLPILLDNRHLRP
Ga0242655_101168721	3300022532	Soil	MLCRFLILYGSLYAGFGVQSPYLPILLDNHHLRPETIGL
Ga0212123_108408941	3300022557	Iron-Sulfur Acid Spring	MTAFSRLALSRYLTLYAALYAGFGVQSPYLPSLLESRDLRPEAIA
Ga0233356_10296013	3300023046	Soil	MAAFSRAALSRFLILYGTLYAGFGVQSPYLPSLLDSRNLR
Ga0207693_111463202	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLYRFLILYGLLYAGFGVQSPYLPILLDNRHLRPETIALALAA
Ga0207664_107369931	3300025929	Agricultural Soil	MLYRFLILYGLLYAGFGVQSPYLPILLDNRHLRPETIALALAAGMAMRLM
Ga0257150_10275321	3300026356	Soil	MHLSSSRSMLYRFFILYGSLYAGFGVQSPYLPILLDNHHLRPET
Ga0257159_10804092	3300026494	Soil	MRMHLSSSRSMLYRFFILYGSLYAGFGVQSPYLPILLDNRHLRPET
Ga0257161_10902182	3300026508	Soil	MISSSRSMLYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETIALALAAGTAMRLMAAQ
Ga0209059_12828541	3300026527	Soil	MAALYPAALSRFLVLYATLYAAFGVQSPYLPSLLDSRNLPPEAIA
Ga0179593_11133873	3300026555	Vadose Zone Soil	MLYRFLILYGLLYAGFGVQSPYLPILLDNRHLRPETIALALAAGMAMRLMAAQQ
Ga0208365_10061293	3300027070	Forest Soil	MISSSRSILYRFFILYGSLYAGFGVQSPYLPILLDNRH
Ga0208604_10176962	3300027090	Forest Soil	MISSSRSMLCRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETIALALAAGTAMRLIAAQGVAR
Ga0208097_10002446	3300027173	Forest Soil	MRLSSSRSILYRFFILYGSLYAGFGVQSPYLPILLDNHHLRP
Ga0208097_10121621	3300027173	Forest Soil	MLYRFLILYGSLYAGFGVQSPYLPILLDKILLDNR
Ga0207948_10312772	3300027174	Forest Soil	MISSSRSVLYRFLILYGSLYAGFGVQSPYLPILLDNRHLPPETIALALAAGT
Ga0209524_10868681	3300027521	Forest Soil	MLYRFLILYGLLYAGFGVQSPYLPILLDNRHLRPETIALA
Ga0209003_10853062	3300027576	Forest Soil	MRRHLSSSRSILYRFLILYGLLYAGFGVQSPYLPILLDNRHLRPETIALALAAGTAMR
Ga0209528_10645971	3300027610	Forest Soil	MRMHLSSSRSMLYRFFILYGSLYAGFGVQSPYLPILLDNHHLRP
Ga0209625_10178371	3300027635	Forest Soil	MISSSRSMLYRFFILYGSLYAGFGVQSPYLPILLDNHHLRPETIGLALAR
Ga0209076_10941021	3300027643	Vadose Zone Soil	MLYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPET
Ga0209118_11867892	3300027674	Forest Soil	MRMHLSSSRSMLYRFFILYGSLYAGFGVQSPYLPI
Ga0209693_101587643	3300027855	Soil	MISSSRSMLYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPE
Ga0209526_100582313	3300028047	Forest Soil	MISSSRSMLYRFLILYGLLYAGFGVQSPYLPILLDNRHLRPETIALALAA
Ga0209526_105488372	3300028047	Forest Soil	MISSSRSMLYRFLILYGLLYAGFGVQSPYLPILLDNRHLR
Ga0209526_109472071	3300028047	Forest Soil	MLYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETIALALAA
Ga0075404_109535811	3300030842	Soil	MISSSRSVLYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPE
Ga0170822_145989284	3300031122	Forest Soil	MISSSRSMLYRFFTLYGSLYAGFGVQSPYLPILLDNHHLRPET
Ga0170824_1078609782	3300031231	Forest Soil	MIGSSRSILYRFLILYGALYAGFGVQSPYLPILLDNR
Ga0170824_1140954621	3300031231	Forest Soil	MISSSRSILYRFLALYGLLYAGFGVQSPYLPILLDNRHLR
Ga0170824_1150520011	3300031231	Forest Soil	MLYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETI
Ga0170824_1244069992	3300031231	Forest Soil	MISSSRSMLYRFLILYGLLYAGFGVQSPYLPILLDNRHLRPETIALALAAGTAMRLMAAQ
Ga0318516_103492702	3300031543	Soil	MLYRFLILYGLLYAGFGVQSPYLPILLDNRHLRPETIALALAAGT
Ga0318538_104153621	3300031546	Soil	MISSSRSVLYRFLILYGLLYAWFGVQSPYLPILLDNRHLRAETIALALAAGTAMRLI
Ga0318528_102315112	3300031561	Soil	MISSSRSVLYRFLILYGLLYAWFGVQSPYLPILLDNRHLRAETIALALAAGTAMR
Ga0318573_101551222	3300031564	Soil	MISSSSSMLYRFLLLDGLLYAGFGVQSPYLPILLDNRHLRPETIALALTASRRCG
Ga0307483_10326011	3300031590	Hardwood Forest Soil	MAAFSRAALSRFLILYGTLYAGFGVQSPYLPSLLDSRNL
Ga0318574_100243223	3300031680	Soil	MISSSRSMLYRFLILYGSLYAGFGVQSPYLPILLDNRHLGPETIALALTAGTAMRLIAA
Ga0318572_104714592	3300031681	Soil	MISSSRSILYRFLSLYATLYAGFGVQSPYLPILLDN
Ga0318572_106270621	3300031681	Soil	MISSSRSMLYRFLILYGLLYAGFGVQSPYLPILLDNRHLRPETI
Ga0318560_103880271	3300031682	Soil	MISSSRSVLYRFLILYGLLYAWFGVQSPYLPILLDNRHL
Ga0310686_1005738021	3300031708	Soil	MISSSRSTLYRFLILYGSLYAGFGVQSPYLPILLDNR
Ga0307474_115564211	3300031718	Hardwood Forest Soil	MISSSRSVLYRFLILYGSLYAGFGVQSPYLPILLDNRHLPPETIALALAAG
Ga0306917_102452941	3300031719	Soil	MISSSRSTLYRFLSLYAALYAGFGAQSPYLPILLDNRHLSPQA
Ga0306918_100918244	3300031744	Soil	MISSSRSMLYRFLILYGLLYAGFGVQSPYLPILLDNRHLRPET
Ga0318492_101854911	3300031748	Soil	MISSSRSTLYRFLSLYAALYAGFGVQSPYLPILLDNRHLSPETI
Ga0318494_102904612	3300031751	Soil	MISSSRSVLYRFLILYGSLYAGFGVQSPYLPILLDNRHLHAETIALALACGTAMRLM
Ga0307477_102664383	3300031753	Hardwood Forest Soil	MISSSRSMLCRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETIA
Ga0318537_100679311	3300031763	Soil	MISSSRSVLYRFLILYGSLYAGFGVQSPYLPILLDNRHLHAETIALALACAT
Ga0318554_104230801	3300031765	Soil	MISSSRSVLYRFLILYGSLYAGFGVQSPYLPILLDNRHLPPETIALA
Ga0318543_100674311	3300031777	Soil	MISSSRSILYRFLVLYGSLYAGFGVQSPYLPILLDNHH
Ga0318543_102252333	3300031777	Soil	MISSSRSILYRFLSLYATLYAGFGVQSPYLPILLD
Ga0318566_102932452	3300031779	Soil	MISSSRSMLYRFLILYGSLYAGFGVQSPYLPILLDNRHLGPETIALALTAGTAMRSM
Ga0318547_103657541	3300031781	Soil	MISSSRSVLYRFLILYGLLYAWFGVQSPYLPILLDNRHLRAETIALALAA
Ga0318503_100240002	3300031794	Soil	MISSSRSMLYRFLILYGSLYAGFGVQSPYLPILLDNRHLGPETIALALTAGTAMARQGAT
Ga0318557_100358353	3300031795	Soil	MLYRFLILYGSLYAGFGVQSPYLPILLDNRHLGPETIALALTAGTAMRLIAAQA
Ga0318497_101629151	3300031805	Soil	MISSSSSMLYRFLLLYGLLYAGFGVQSPYLPILLD
Ga0318499_103909951	3300031832	Soil	MISSSRSTLYRFLSLYAALYAGFGVQSPYLPILLDTRHL
Ga0318512_100513301	3300031846	Soil	MLYRFLILYGSLYAGFGVQSPYLPILLDNRHLGPETIALALTAGTAMRLIA
Ga0318512_101400391	3300031846	Soil	MISSSRSILYRFLSLYAALYAGFGVQSPYLPILLDNRHLSPET
Ga0318527_102246591	3300031859	Soil	MLYRFLILYGLLYAGFGVQSPYLPILLDNRHLRPETIALAL
Ga0306919_105421642	3300031879	Soil	MISSSRSILYRFLSLYATLYAGFGVQSPYLPILLDNRHLSPETIALALAAG
Ga0306925_107478992	3300031890	Soil	MISSSRSTLYRFLSLYAVLYAGFGVQSPYLPILLDN
Ga0318551_104010961	3300031896	Soil	MISSSRSVLYRFLILYGLLYAWFGVQSPYLPILLDNRHLRAET
Ga0318520_110103452	3300031897	Soil	MLYRFLILYGLLYAGFGVQSPYLPILLDNRHLRPET
Ga0306923_102902653	3300031910	Soil	MISSSRSVLYRFLILYGSLYAGFGVQSPYLPILLD
Ga0306923_115066971	3300031910	Soil	MISSSRSTLYRFLSLYAALYAGFGVQSPYLPILLDNRHLSPEAIAL
Ga0306921_107524871	3300031912	Soil	MISSSRSILYRFLVLYGSLYAGFGVQSPYLPILLDNR
Ga0306921_117407472	3300031912	Soil	MISSSRSISYRFLSLYATLYAGFGVQSPYLPILLDNRHLSPETIALALAAG
Ga0310916_115395951	3300031942	Soil	MISSSRSTLYRFLILYGSLYAGFGVQSPYLPILLDYRHLG
Ga0310913_104774491	3300031945	Soil	MISSSRSILYRFLVLYGSLYAGFGVQSPYLPILLDNHHLPPETIAL
Ga0310913_105761582	3300031945	Soil	MISSSRSVLYRFLILYGSLYAGFGVQSPYLPILLDN
Ga0310910_100262391	3300031946	Soil	MISSSSSMLYRFLLLYGLLYAGFGVQSPYLPILLDNRHLRPETIALALTASRRCG
Ga0310910_101025614	3300031946	Soil	MISSSRSVLYRFLILYGSLYAGFGVQSPYLPILLDNR
Ga0310910_104612372	3300031946	Soil	MISSLRSTLYRFLSLYAALYAGFGVQSPYLPILLDNRHLSPETIAL
Ga0310910_115660111	3300031946	Soil	MISSSRSILYRFLSLYAALYAGFGVQSPYLPILLDNRHLSPETIAL
Ga0310909_108735562	3300031947	Soil	MISSSRSVLYRFLILYGSLYAGFGVQSPYLPILLDNRHLHAETIALALACATAMRL
Ga0306926_106167003	3300031954	Soil	MISSSRSTLYRFLSLYAALYAGFGVQSPYLPILLDNR
Ga0306926_118159522	3300031954	Soil	MISSSRSILYRFLSLYATLYAGFGVQSPYLPILLDNRHLSPETIALALAA
Ga0306926_120719851	3300031954	Soil	MISSSRSILYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETIALALAAGT
Ga0318559_100803532	3300032039	Soil	MISSSRSVLYRFLILYGSLYAGFGVQSPYLPILLDNRHLHAETIALALACGTAMRLMAAQAVA
Ga0318559_100849781	3300032039	Soil	MISSSRSILYRFLSLYATLYAGFGVQSPYLPILLDNRH
Ga0318559_102171432	3300032039	Soil	MISSSSSMLYRFLLLDGLLYAGFGVQSPYLPILLDNRHLRPETIALALTAGTAMRLIAAQAVARLAD
Ga0318545_102795872	3300032042	Soil	MISSSRSMLYRFLILYGSLYAGFGVQSPYLPILLDNRHLGPETIALALTAGTAMRLMAAQAVARL
Ga0318556_101974062	3300032043	Soil	MISSSRSVLYRFLILYCSLYAGFGVQSPYLPILLDNRHLHAETIALALACATAMRLMAAQAVARLADG
Ga0318558_103443082	3300032044	Soil	MISSSRSTLYRFLSLYAALYAGFGVQSPYLPILLDN
Ga0318533_101884674	3300032059	Soil	MISSSRSVLYRFLILYGSLYAGFGVQSPYLPILLDNRHLP
Ga0318533_102096661	3300032059	Soil	MISSSRSILYRFLVLYGSLYAGFGVQSPYLPILLDNHHLPPETIALALTAGMVMRLMA
Ga0318505_101187511	3300032060	Soil	MISSSRSVLYRFLILYCSLYAGFGVQSPYLPILLDNRHLHAETIALALACATAMRLM
Ga0318505_104494952	3300032060	Soil	MISSSRSTLYRFLSLYAALYAGFGVQSPYLPILLDNRY
Ga0318504_101988801	3300032063	Soil	MISSSRSTLYRFLSLYAALYAGFGVQSPYLPILLDNRHLSPEAI
Ga0306924_103817041	3300032076	Soil	MISSSRSMLYRFLILYGLLYAGFGVQSPYLPILLDN
Ga0318577_100543301	3300032091	Soil	MISSSSSMLYRFLLLYGLLYAGFGVQSPYLPILLDNRHLRPET
Ga0318540_103311812	3300032094	Soil	MISSSRSVLYRFLILYGLLYAWFGVQSPYLPILLDNRHLRAETIALALAAGTAMRL
Ga0307471_1010105381	3300032180	Hardwood Forest Soil	MLYRFFILYGSLYAGFGVQSPYLPILLDNHHLRPET
Ga0307472_1022718951	3300032205	Hardwood Forest Soil	MISSSRSVLYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPETIALALAAGTA
Ga0306920_1016097812	3300032261	Soil	MISSSRSVLYRFLILYGSLYAGFGVQSPYLPILLDNRHLHAETIALALAC
Ga0306920_1023807081	3300032261	Soil	MRMHLSSSRSMLYRFFILYGSLYAGFGVQSPYLPIL
Ga0348332_103910312	3300032515	Plant Litter	MISSSRSMLYRFLILYGSLYAGFGVQSPYLPILLDNRHLRPES

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042230

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences