Metagenome / Metatranscriptome Family F042059

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F042059
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	44 residues
Representative Sequence	LASQAEAVSGDRPGVVPRGGQGLALATLCTLLFLTFLDNTVVS
Number of Associated Samples	143
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.74 %
% of genes near scaffold ends (potentially truncated)	99.37 %
% of genes from short scaffolds (< 2000 bps)	95.60 %
Associated GOLD sequencing projects	139
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.843 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.044 % of family members)
Environment Ontology (ENVO)	Unclassified (18.239 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.541 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.21% β-sheet: 0.00% Coil/Unstructured: 64.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF01713	Smr	23.90
PF04264	YceI	2.52
PF01202	SKI	0.63
PF07690	MFS_1	0.63
PF04972	BON	0.63
PF10576	EndIII_4Fe-2S	0.63
PF04879	Molybdop_Fe4S4	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	2.52

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.84 %
Unclassified	root	N/A	25.16 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.84 %
Unclassified	root	N/A	25.16 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.84 %
Unclassified	root	N/A	25.16 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	67.30 %
Unclassified	root	N/A	25.16 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	67.30 %
Unclassified	root	N/A	25.16 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	49.06 %
Unclassified	root	N/A	25.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.16 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	21.38 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	11.32 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.52 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.16 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	20.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.32 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.89 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.63 %
Corynebacteriales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.16 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	20.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.32 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.89 %
Tomitella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Tomitella	0.63 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.16 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	20.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.32 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.89 %
Tomitella biformata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Tomitella → Tomitella biformata	0.63 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573005\|GZGK9D402JX9ZT	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	525	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105746675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	539	Open in IMG/M
3300004091\|Ga0062387_101665546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	517	Open in IMG/M
3300004476\|Ga0068966_1444335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1497	Open in IMG/M
3300004965\|Ga0072321_1128883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	551	Open in IMG/M
3300005166\|Ga0066674_10377469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	662	Open in IMG/M
3300005167\|Ga0066672_10271679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1096	Open in IMG/M
3300005186\|Ga0066676_10196079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1296	Open in IMG/M
3300005435\|Ga0070714_100740869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	949	Open in IMG/M
3300005437\|Ga0070710_10543187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	802	Open in IMG/M
3300005437\|Ga0070710_10985492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300005467\|Ga0070706_100686927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	950	Open in IMG/M
3300005537\|Ga0070730_11065194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300005557\|Ga0066704_10415314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	892	Open in IMG/M
3300005560\|Ga0066670_10394291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	848	Open in IMG/M
3300005591\|Ga0070761_10086872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1788	Open in IMG/M
3300005614\|Ga0068856_101354289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300005921\|Ga0070766_10649001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriales incertae sedis → Tomitella → Tomitella biformata	712	Open in IMG/M
3300005952\|Ga0080026_10220137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	567	Open in IMG/M
3300006028\|Ga0070717_10625622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	977	Open in IMG/M
3300006028\|Ga0070717_12121446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505	Open in IMG/M
3300006032\|Ga0066696_10579267	Not Available	731	Open in IMG/M
3300006163\|Ga0070715_10019299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2612	Open in IMG/M
3300006176\|Ga0070765_100339934	All Organisms → cellular organisms → Bacteria	1394	Open in IMG/M
3300006903\|Ga0075426_10757551	Not Available	729	Open in IMG/M
3300006954\|Ga0079219_10248222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1056	Open in IMG/M
3300006954\|Ga0079219_10295666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	999	Open in IMG/M
3300007076\|Ga0075435_100331369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1304	Open in IMG/M
3300009011\|Ga0105251_10103278	All Organisms → cellular organisms → Bacteria	1302	Open in IMG/M
3300009012\|Ga0066710_104402748	Not Available	526	Open in IMG/M
3300009038\|Ga0099829_10042093	All Organisms → cellular organisms → Bacteria	3334	Open in IMG/M
3300009148\|Ga0105243_11093128	Not Available	805	Open in IMG/M
3300009698\|Ga0116216_10330388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	928	Open in IMG/M
3300009698\|Ga0116216_10845273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	548	Open in IMG/M
3300009839\|Ga0116223_10080868	All Organisms → cellular organisms → Bacteria	2076	Open in IMG/M
3300010358\|Ga0126370_11113529	Not Available	729	Open in IMG/M
3300010360\|Ga0126372_11962586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	631	Open in IMG/M
3300010362\|Ga0126377_12326965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	612	Open in IMG/M
3300010376\|Ga0126381_103381642	Not Available	628	Open in IMG/M
3300010379\|Ga0136449_100930669	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300010379\|Ga0136449_102518617	Not Available	737	Open in IMG/M
3300010379\|Ga0136449_102824229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300010880\|Ga0126350_11547029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1012	Open in IMG/M
3300011070\|Ga0138567_1030636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300012096\|Ga0137389_11060611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	694	Open in IMG/M
3300012176\|Ga0153952_1125291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	564	Open in IMG/M
3300012200\|Ga0137382_11028478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	591	Open in IMG/M
3300012209\|Ga0137379_11793526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300012351\|Ga0137386_10078397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2312	Open in IMG/M
3300012357\|Ga0137384_10495906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1003	Open in IMG/M
3300012357\|Ga0137384_11568729	Not Available	508	Open in IMG/M
3300012360\|Ga0137375_10594080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	923	Open in IMG/M
3300012507\|Ga0157342_1041436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	618	Open in IMG/M
3300014162\|Ga0181538_10684253	Not Available	532	Open in IMG/M
3300014168\|Ga0181534_10145056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1213	Open in IMG/M
3300016294\|Ga0182041_10633055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	943	Open in IMG/M
3300016387\|Ga0182040_10376212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1108	Open in IMG/M
3300016387\|Ga0182040_10453708	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300016404\|Ga0182037_10787995	Not Available	819	Open in IMG/M
3300017928\|Ga0187806_1219661	Not Available	649	Open in IMG/M
3300017932\|Ga0187814_10180686	Not Available	790	Open in IMG/M
3300017932\|Ga0187814_10244830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300017933\|Ga0187801_10423998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300017942\|Ga0187808_10577735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300017955\|Ga0187817_10201323	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300017955\|Ga0187817_10718061	Not Available	638	Open in IMG/M
3300017959\|Ga0187779_10573462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	753	Open in IMG/M
3300017961\|Ga0187778_10780320	Not Available	650	Open in IMG/M
3300017972\|Ga0187781_10199386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1412	Open in IMG/M
3300017974\|Ga0187777_11079003	Not Available	583	Open in IMG/M
3300017975\|Ga0187782_10086219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2302	Open in IMG/M
3300017995\|Ga0187816_10216027	Not Available	835	Open in IMG/M
3300018006\|Ga0187804_10044536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1720	Open in IMG/M
3300018007\|Ga0187805_10383992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	651	Open in IMG/M
3300018009\|Ga0187884_10162757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	935	Open in IMG/M
3300018012\|Ga0187810_10449865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300018026\|Ga0187857_10511079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	538	Open in IMG/M
3300018046\|Ga0187851_10230579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1090	Open in IMG/M
3300018058\|Ga0187766_11461601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	504	Open in IMG/M
3300018060\|Ga0187765_11263308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	521	Open in IMG/M
3300018086\|Ga0187769_10442796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	979	Open in IMG/M
3300020075\|Ga0206349_1210613	Not Available	717	Open in IMG/M
3300020581\|Ga0210399_10685030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	843	Open in IMG/M
3300021088\|Ga0210404_10448684	Not Available	725	Open in IMG/M
3300021171\|Ga0210405_10309906	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300021180\|Ga0210396_10598698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	958	Open in IMG/M
3300021180\|Ga0210396_11712066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	510	Open in IMG/M
3300021403\|Ga0210397_10159979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1581	Open in IMG/M
3300021405\|Ga0210387_10895759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	781	Open in IMG/M
3300021407\|Ga0210383_10723829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	855	Open in IMG/M
3300021407\|Ga0210383_11797481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
3300021474\|Ga0210390_11493271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	535	Open in IMG/M
3300022529\|Ga0242668_1150476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300022709\|Ga0222756_1042114	Not Available	663	Open in IMG/M
3300022714\|Ga0242671_1117904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300022720\|Ga0242672_1137442	Not Available	515	Open in IMG/M
3300024288\|Ga0179589_10545210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300025905\|Ga0207685_10747276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	535	Open in IMG/M
3300025928\|Ga0207700_10556913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1018	Open in IMG/M
3300026317\|Ga0209154_1163739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	910	Open in IMG/M
3300027109\|Ga0208603_1001637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	3714	Open in IMG/M
3300027528\|Ga0208985_1000362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6434	Open in IMG/M
3300027568\|Ga0208042_1151797	Not Available	580	Open in IMG/M
3300027625\|Ga0208044_1159975	Not Available	620	Open in IMG/M
3300027869\|Ga0209579_10061264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1993	Open in IMG/M
3300027908\|Ga0209006_10371724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1209	Open in IMG/M
3300028047\|Ga0209526_10761710	Not Available	603	Open in IMG/M
3300028801\|Ga0302226_10195847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	866	Open in IMG/M
3300028906\|Ga0308309_10884391	Not Available	775	Open in IMG/M
3300029636\|Ga0222749_10553077	Not Available	626	Open in IMG/M
3300029701\|Ga0222748_1064352	Not Available	655	Open in IMG/M
3300029993\|Ga0302304_10204850	Not Available	732	Open in IMG/M
3300030399\|Ga0311353_10560240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1004	Open in IMG/M
3300030578\|Ga0210275_10279447	Not Available	574	Open in IMG/M
3300030582\|Ga0210261_1119942	Not Available	627	Open in IMG/M
3300030740\|Ga0265460_12010002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	601	Open in IMG/M
3300030743\|Ga0265461_13549543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	528	Open in IMG/M
3300031231\|Ga0170824_105235769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	997	Open in IMG/M
3300031236\|Ga0302324_103289251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	530	Open in IMG/M
3300031543\|Ga0318516_10287257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	951	Open in IMG/M
3300031564\|Ga0318573_10703882	Not Available	543	Open in IMG/M
3300031573\|Ga0310915_11126784	Not Available	544	Open in IMG/M
3300031668\|Ga0318542_10318877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	797	Open in IMG/M
3300031668\|Ga0318542_10398901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	710	Open in IMG/M
3300031681\|Ga0318572_10131831	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300031708\|Ga0310686_106339673	Not Available	548	Open in IMG/M
3300031708\|Ga0310686_118871481	Not Available	653	Open in IMG/M
3300031720\|Ga0307469_11062023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	759	Open in IMG/M
3300031736\|Ga0318501_10306762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	848	Open in IMG/M
3300031747\|Ga0318502_10397026	Not Available	820	Open in IMG/M
3300031753\|Ga0307477_10511398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	816	Open in IMG/M
3300031769\|Ga0318526_10064747	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300031781\|Ga0318547_10668233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300031795\|Ga0318557_10355406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	673	Open in IMG/M
3300031796\|Ga0318576_10186382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	975	Open in IMG/M
3300031819\|Ga0318568_10872722	Not Available	557	Open in IMG/M
3300031821\|Ga0318567_10060735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1976	Open in IMG/M
3300031831\|Ga0318564_10172712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	964	Open in IMG/M
3300031890\|Ga0306925_12136461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300032008\|Ga0318562_10493222	Not Available	710	Open in IMG/M
3300032009\|Ga0318563_10197566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1084	Open in IMG/M
3300032010\|Ga0318569_10229427	Not Available	862	Open in IMG/M
3300032065\|Ga0318513_10171098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1041	Open in IMG/M
3300032066\|Ga0318514_10349703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	783	Open in IMG/M
3300032067\|Ga0318524_10234073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	943	Open in IMG/M
3300032067\|Ga0318524_10736682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300032090\|Ga0318518_10537277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300032261\|Ga0306920_102654852	Not Available	685	Open in IMG/M
3300032770\|Ga0335085_10354952	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300032770\|Ga0335085_11430116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	723	Open in IMG/M
3300032782\|Ga0335082_10477949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1109	Open in IMG/M
3300032783\|Ga0335079_12303829	Not Available	511	Open in IMG/M
3300032828\|Ga0335080_10472762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1335	Open in IMG/M
3300032829\|Ga0335070_10366753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1384	Open in IMG/M
3300032892\|Ga0335081_12379175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	551	Open in IMG/M
3300032954\|Ga0335083_11398239	Not Available	535	Open in IMG/M
3300033134\|Ga0335073_10574086	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300033158\|Ga0335077_10688655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1054	Open in IMG/M
3300033806\|Ga0314865_204965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.60%
Host-Associated	Host-Associated	4.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.91%
Aquatic	Environmental → Aquatic	10.69%
Plants	Host-Associated → Plants	3.77%
Fungi	Host-Associated → Fungi	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.39%
Freshwater	Environmental → Aquatic → Freshwater	10.69%
Peat	Environmental → Terrestrial → Peat	2.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.52%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.26%
Mycelium	Host-Associated → Fungi → Mycelium	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.58%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.69%
Loam	Environmental → Terrestrial → Soil → Loam	10.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.26%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.95%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.52%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.26%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.63%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.04%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.92%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.66%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.03%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.52%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.52%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.52%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.52%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.89%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.26%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.26%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.26%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.63%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.63%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.63%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.63%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573005	Grass soil microbial communities from Rothamsted Park, UK - FG3 (Nitrogen)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004476	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004965	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 17 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011070	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 52 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012176	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ036 MetaG	Host-Associated	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012507	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610	Host-Associated	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027528	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030578	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO105-VCO054SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030582	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO145-ARE022SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG3_03717950	2189573005	Grass Soil	VASQAEEVSGDRPGGVVPRGGQGLALATLCTLLFLTFLDNTVVSV
INPhiseqgaiiFebDRAFT_1057466752	3300000364	Soil	VASQAEAVSGGRPGRTVPAGGQALALATLCPVLFLTFLD
Ga0062387_1016655462	3300004091	Bog Forest Soil	LASQAEAVSGDRDGAGNGGRAVPRGGQALALATLCTVLFLTFLDNTVVSVAL
Ga0068966_14443354	3300004476	Peatlands Soil	VARQAEALSGDRPGGRRWAGGAVPRGGQGLALATLCTLLFLTFL
Ga0072321_11288831	3300004965	Peatlands Soil	VARQAEALSGDRPGGRRWAGGAVPRGGQRLALATLCTLLFLKFLDNTVVSVALGDIQTS
Ga0066674_103774692	3300005166	Soil	VASQAEAVSGDRPGTGGVLPRGGQGLALATLCTLLFLTFLDNTVVSVA
Ga0066672_102716791	3300005167	Soil	MARQADIIPQSGRRVALRGGQGLALATLCTLLFLTFLDNT
Ga0066676_101960794	3300005186	Soil	MASQTEAVSGDRPGGVVPRGGQGLALATLCTLLFLTFLDNTVV
Ga0070714_1007408692	3300005435	Agricultural Soil	LARQARAVSGDRRGVDEIVPRGGRSLALGTLCALLFLTFLDNTVVSVA
Ga0070710_105431871	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MASQAEAVSGDRPSGSAHGRVARGGQGLALATLCTLLFLTFLDNTVVSVAL
Ga0070710_109854921	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LARQARAVSGDRRGVDEIVPRGGRSLALGTLCALLFLTFLDNTVVS
Ga0070706_1006869273	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VSGGRPGRTVPGRGQALALATLCTVLFLTFLDNTVVSVALGD
Ga0070730_110651942	3300005537	Surface Soil	LARPVGAVSGDEHSENAAGPGRGTSLALATLCTLLFLTFLDNTVVSVALG
Ga0066704_104153141	3300005557	Soil	MARQADIIPQSGRRVALRGGQGLALATLCTLLFLTFLDN
Ga0066670_103942912	3300005560	Soil	VASQAEAVSGDRPGGRSGQGMGRVPGGGQGLALATLCTLLFLTFLDNTVVSVALG
Ga0070761_100868725	3300005591	Soil	LARPAEAVSGGQQGGDPIPARSGQPLALTVLCTLLFLTFLDNTVVSVALGE
Ga0068856_1013542891	3300005614	Corn Rhizosphere	VASQAEAVSGDRHGGQIVPRGGQALALATLCTLLFLT
Ga0070766_106490012	3300005921	Soil	VASQAEAVSGEERLVPRGGRGLALATLCTLLFLTFLDNTVVSV
Ga0080026_102201372	3300005952	Permafrost Soil	LASQAEAVSGDQPGVVPRGGQGLALATLCTLLFLTFLDNTVVS
Ga0070717_106256223	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LAGQSEAVSGGRRTVTRGGQSLALATLCTLLFLTFLDNTVVSV
Ga0070717_121214461	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VARPVEAVSGDEHSENAAGPGRGTSLALATLCTLLFLTFLDNTVVSVALGQIY
Ga0066696_105792671	3300006032	Soil	VTSQAEAVSGGRRGRTVPGGGQALALATLCTVLFLTFLDN
Ga0070715_100192996	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VSGGRPGRAVPSGGQALALATLCTVLFLTFLDNTVVSVALG
Ga0070765_1003399344	3300006176	Soil	VARQAEVVSGDRGIVARGGQTLALATLCTLLFLTFLDNTVVS
Ga0075426_107575511	3300006903	Populus Rhizosphere	VSGGRRGRIVPGGGQALALATLCTVLFLTFLDNTV
Ga0079219_102482221	3300006954	Agricultural Soil	VTSQAEAVSGGRRGRTVPGGQALALATLCTVLFLTFLDNTVVSVAL
Ga0079219_102956661	3300006954	Agricultural Soil	VQRLRQGRRVASRAEAVSGDRHGGQIVPRGGQALALATLCTLL
Ga0075435_1003313691	3300007076	Populus Rhizosphere	VTSRAEAVSGDRHGRQGIVPRGGQALALATLCTLLFLTFLDNTVVSVAL
Ga0105251_101032781	3300009011	Switchgrass Rhizosphere	VTSQAEAVSGGRPGRAVPSGGQALALATLCTVLFLTFLDNTVVSVA
Ga0066710_1044027481	3300009012	Grasslands Soil	MASQTEAVSGDRPGGVVPRGGQGLALATLCTLLFLTFLDNTVVSVAL
Ga0099829_100420937	3300009038	Vadose Zone Soil	LASQAEALSGDRHGEGGAVGRGGQALALATLCTLLFLTFLDN
Ga0105243_110931282	3300009148	Miscanthus Rhizosphere	VASQAEAVSGGRPGRTVPGGGQALALATLCTVLFLTFLD
Ga0116216_103303883	3300009698	Peatlands Soil	VASQAEALSGDRHGEGNGGDGVPRGGQALALATLCTLLFLTCLDN
Ga0116216_108452732	3300009698	Peatlands Soil	LASQAEAVSGDRRGVIPRGGQGLALATLCTLLFLTFLDNTVVSV
Ga0116223_100808686	3300009839	Peatlands Soil	LGRSVASQAEALSGDRHGEGNGRGAVPRGGQALALATLCTLLFLTFLD
Ga0126370_111135292	3300010358	Tropical Forest Soil	MARPVETVSGGQPGIVARGGQSLALATLCTLLFLTFLDNT
Ga0126372_119625863	3300010360	Tropical Forest Soil	VTSQAEALSGDRPQGGPGGGVVARGGQALALGTLCTLLFLTFLD
Ga0126377_123269651	3300010362	Tropical Forest Soil	LASQAEAVSEDGVVPRGGQALALATLCTLLFLTFLNNTVVSV
Ga0126381_1033816421	3300010376	Tropical Forest Soil	VASQAEAVSGGRSGRTVPGRGQALALATLCTLLFLTFLDNTVVSV
Ga0136449_1009306694	3300010379	Peatlands Soil	VARPIEAVSGGRRREGITAGRGQSLALFTLCTLLFLTFLDNTVV
Ga0136449_1025186171	3300010379	Peatlands Soil	MARPVETVSGDQQGIVARGGQSLALATLCTLLFLTFLDNTIVS
Ga0136449_1028242291	3300010379	Peatlands Soil	LARPIEAVSGGQHGAGVTAGRGQSLALFTLCTLLFLTFLDNTVVSVALG
Ga0126350_115470291	3300010880	Boreal Forest Soil	MASQAEAVSGDRPGVIPRGGQALALATLCTLLFLTFLDNTVVSVAL
Ga0138567_10306362	3300011070	Peatlands Soil	VARQAEALSGDRPGGRRWAGGAVPRGGQGLALATLCTLLFLTF
Ga0137389_110606112	3300012096	Vadose Zone Soil	MASQAEALSGDRHGGEGGAVPRGGQALALATLCTLLFLTFLDN
Ga0153952_11252911	3300012176	Attine Ant Fungus Gardens	LARQAEAVSGGQANTARGGQSLALATLCTLLFLTFLDNTVVSV
Ga0137382_110284781	3300012200	Vadose Zone Soil	VASQAEAVSGGRPGRTVPGGGQALALGTLCTVLFLTFLDNTVVSVALGDIQVSL
Ga0137379_117935261	3300012209	Vadose Zone Soil	VASQAEAVSGDRHGGGRVVPRGGQALALATLCTLLFLTFLDNTVVSVA
Ga0137386_100783971	3300012351	Vadose Zone Soil	VASQAEAVSGDRHGGGIVPRGGQALALATLCTLLFLTFLDNTV
Ga0137384_104959061	3300012357	Vadose Zone Soil	LASQAEAVSGDRHGTGLLRGGQALALATLCTLLFL
Ga0137384_115687292	3300012357	Vadose Zone Soil	VASQAEAVSGDRPGSGRGGVVPRGGQGLALATLCTLLFLTFLDNT
Ga0137375_105940801	3300012360	Vadose Zone Soil	VTSQAEAVSGGRPGRAVPRGGQGLALTTLCTLLFLTFLDNTVVS
Ga0157342_10414361	3300012507	Arabidopsis Rhizosphere	VASQAEAVSGDRHGDQGIVPRGGQALALATLCTLLFLTFLDNTV
Ga0181538_106842531	3300014162	Bog	LASQAEAVSGDQHGTGGAVPRGGQALALATLCTLLFLTFLDNT
Ga0181534_101450561	3300014168	Bog	VASQAAAVSGGPQGGSGPRGGTRLALATLCTLLFLTFLDNTVVS
Ga0182041_106330551	3300016294	Soil	VARQAARASGDRFRIGSVPRGGQALALGTLCTLLFLTFLDNTVVAVAL
Ga0182040_103762121	3300016387	Soil	MARQAETVSGDRHRGGVIPRGGQGLALATLCTLLFLIFLDNTVVSVALGDI
Ga0182040_104537083	3300016387	Soil	VARPVETVPGDQYGRAGIVARGGPSLALATLSPLLFLPFLDNTVV
Ga0182037_107879952	3300016404	Soil	MARPVETVSGGQQGIVARGGQSLALATLCTLLFLTFLDNTVVSVALG
Ga0187806_12196612	3300017928	Freshwater Sediment	MAGPVETVHGDQQGIVARGGQSLALATLCTLLFLTFLDNTIVSV
Ga0187814_101806861	3300017932	Freshwater Sediment	MAGPAETIRGDQHGEEGISARRGGQSLALAVLCTLLFLTFLDNTVVS
Ga0187814_102448302	3300017932	Freshwater Sediment	MGSVAGGPAGGVTVRRGNLAVALATLCTLLFLTFLDNT
Ga0187801_104239982	3300017933	Freshwater Sediment	VARQARAVAPDRRAGEGVARGGQGLVLAMLCTLLFLTFLDTT
Ga0187808_105777352	3300017942	Freshwater Sediment	VAGQARAVSGDRRAGEGVVVPRGGQALALATLCTLLFLTFLDNTVVSV
Ga0187817_102013234	3300017955	Freshwater Sediment	MAGPAETIRGDQHGEEGISARRGGQSLALAVLCTLLFLTFLDNTVVSVA
Ga0187817_107180612	3300017955	Freshwater Sediment	MAGPVETVPSDQQGTVARGQSLALATLCTLLFLTFLD
Ga0187779_105734621	3300017959	Tropical Peatland	VARPVEAISGDQYGQGRILPRGGQSLALATLCTLLFLTF
Ga0187778_107803202	3300017961	Tropical Peatland	MARPVETVSGGQPGIVARGGQSLALATLCTLLFLT
Ga0187781_101993861	3300017972	Tropical Peatland	LASQAEAVSGDRHGAERIVARGGQSLALATLCTLLFLTFLDNTVVS
Ga0187777_110790031	3300017974	Tropical Peatland	LARPVETVPGEYGDQGIGARGGQSLALAVLCTLLFLTF
Ga0187782_100862191	3300017975	Tropical Peatland	LARPVEAVSGDQHGEERITARGGQSLALATLCTLLFLTFLDNTVVSVALGD
Ga0187816_102160271	3300017995	Freshwater Sediment	MARPVETVSGGQRGIVARGGQSLALATLCTLLFLTFLDNT
Ga0187804_100445364	3300018006	Freshwater Sediment	VARPVETVSGGQQGFVARGGQSLALATLCTLLFLTFLDNTVVSVA
Ga0187805_103839922	3300018007	Freshwater Sediment	VAGQARAVSGDRRAGEGVVVPRGGQALALATLCTLLFLTF
Ga0187884_101627571	3300018009	Peatland	LASQAEAVSGDRPGVVPRGGQRLALATLCTLLFLTFLDNTVVS
Ga0187810_104498651	3300018012	Freshwater Sediment	VARQARAVAPDRRAGESVARGGQGLALAMLCTLLFLTFLDNT
Ga0187857_105110791	3300018026	Peatland	LASQAEAVSGDRPGVVPRGGQGLALGTLCTLLFLTFLDNT
Ga0187851_102305791	3300018046	Peatland	LASQAEAVSGDRPGVAPRGGQGLALATLCTLLFLTFLDNTVV
Ga0187766_114616012	3300018058	Tropical Peatland	MARPVETVSGGQQGIVARGGQSLALATLCTLLFLTFLDNTVVSVALGD
Ga0187765_112633082	3300018060	Tropical Peatland	LASQAEAVSGDRHGEDGVAVRGGQALALATLCTLLFLTFLDNTVVAVAL
Ga0187769_104427963	3300018086	Tropical Peatland	VARPIEAVSGGQRGGEGIIARGGTSLALATLCTLLFLTFLDNTVVSVALGQV
Ga0206349_12106131	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	VSGGRPGRAVPSGGQALALATLCTVLFLTFLDNTVVSVA
Ga0210399_106850301	3300020581	Soil	LASQAEAVSGESHDGAGIVARGGRSLALATLCALLFLTFLDNTVVSV
Ga0210404_104486842	3300021088	Soil	MASQAEAVSGDRPSGPVNGRVPRGGQGLALATLCTLLF
Ga0210405_103099064	3300021171	Soil	MARQADIIPQSGRRVALRGGQGLALATLCTLLFLTFLD
Ga0210396_105986983	3300021180	Soil	VASQAEAVSGEERLVPRGGRGLALATLCTLLFLTFLDNT
Ga0210396_117120662	3300021180	Soil	VQLGRLRQGRQLASQAEAVSGESHDGAGIVARGGRSLALATLCTLLFLTFLDNTVVSVA
Ga0210397_101599794	3300021403	Soil	LARPAEAVSGGQQGGDPIPARSGQSLALTVLCTLLFLTFLDNTVV
Ga0210387_108957591	3300021405	Soil	VASQAEALPGDRPGSGRGGVMPRGGQGLALATLCTLLF
Ga0210383_107238292	3300021407	Soil	LARQAGAVSGDRGTVARGGQWMALATLCTLLFLTFLDNTVVSV
Ga0210383_117974811	3300021407	Soil	LARPVEAVSGDEHSEHAAGPGRGTSLALATLCTLLFLTFLDNTVVSVALGQIYSNPGASPSELQ
Ga0210390_114932712	3300021474	Soil	LARPVEAVSGDEHSEHAAGPGRGTSLALATLCTLLFLTFLDNTVVSVALGQIYS
Ga0242668_11504762	3300022529	Soil	LARSAEAVSGDRHGEGGGAPRAGQRLALATLCTLLFLTF
Ga0222756_10421143	3300022709	Soil	VQLGRLRQGRQLASQAEAVSGESHDGAGIVARGGRSLALATLCTLLFLTFLDN
Ga0242671_11179042	3300022714	Soil	LARSAEAISGDRHGEGGSAPRAGQRLALATLCTLLFLTFLDNT
Ga0242672_11374422	3300022720	Soil	VTSQAEAVSGGRRGRTVPGGGQALALATLCTVLFLTFLDNTVVSVALGD
Ga0179589_105452102	3300024288	Vadose Zone Soil	LARQARAVSGDRRGEDEIVPRGGRSLALGTLCALLFLTFLDNTVERSSRGAR
Ga0207685_107472762	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MARQADIIPQSGRRVALRGGQGLALATLCTLLFLTFLDNTVVSVALGYI
Ga0207700_105569133	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LAGQSEAVSGGRRTVTRGGQSLALATLCTLLFLTFLD
Ga0209154_11637391	3300026317	Soil	MARQADIIPQSGRRVALRGGQGLALATLCTLLFLTFLDNTVVSVAL
Ga0208603_10016371	3300027109	Forest Soil	LASQAEAVSGESHGGAGIVARGGRSLALATLCALLFLTFLDNTVVS
Ga0208985_10003621	3300027528	Forest Soil	VARQARAVAPDRRGGEGVAWGGQGLALAVLCTLLFLTFLDNTVVSVALG
Ga0208042_11517971	3300027568	Peatlands Soil	MARPVETVPGDRQGIVARGGQSLALATLCTLLFLTFLDNTI
Ga0208044_11599752	3300027625	Peatlands Soil	MAGPVETVSGDQQGIVARGQSLALATLCTLLFLTFLDNTIVSAALGEVYSNPGASPTE
Ga0209579_100612641	3300027869	Surface Soil	MARPVGTVSGGQRGEGIITRGGTALALAALCTLLFLTFLDNTVVSVALGQVYTN
Ga0209006_103717241	3300027908	Forest Soil	VASQAEAVSGDRHGEGNGFGVTLRGGQALALGTLCTLLFLTFL
Ga0209526_107617102	3300028047	Forest Soil	LARPVEAVSGDEHSENVAGPGRGTSLALATLCTLLFLTFLDNTVVSVALG
Ga0302226_101958472	3300028801	Palsa	LASQAEAVSGESHGGGGTVARGSRGVALATLCTLLFLTFLDNTVVSVAL
Ga0308309_108843911	3300028906	Soil	LARPVEAVSGDEHSENVAGPGRGTSLALATLCTLLFLTFLDNTVVSVALGQIYP
Ga0222749_105530771	3300029636	Soil	MASQAEAVSGDRPSGPVNGRVPRGGQGLALATLCTLLFLTFLDNTVVSVAL
Ga0222748_10643521	3300029701	Soil	LARPAEAVSGGQQGGDPIPARSGQPLALTVLCTLLFLTFLDNTVVSVALGEIYSSAGA
Ga0302304_102048501	3300029993	Palsa	LASQAEAVSGDRPGVVPRGGQGLALATLCTLLFLTFLDNTV
Ga0311353_105602401	3300030399	Palsa	LASQAEAVSGDRPGVVPRGGQGLALATLCTLLFLTFLDNTVVS
Ga0210275_102794472	3300030578	Soil	LASQAEAVSGDPPGVVPRGGQGLALATLCTLLFLTFLDN
Ga0210261_11199421	3300030582	Soil	VARPVETVSGGQRGGEGTIARGGPSLALAALCTLL
Ga0265460_120100021	3300030740	Soil	LASQAEAVSGESHGGAGIVVRGSRGIALATLCTLLFL
Ga0265461_135495432	3300030743	Soil	LARPVEAVSGGEHSENGIVPRGTSLALATLCTLLFLTFLD
Ga0170824_1052357691	3300031231	Forest Soil	VASQAEEVSGDRPGGVVPRGGQGLALATLCTLLFLTFLDNT
Ga0302324_1032892512	3300031236	Palsa	LASPAEAVSGDRPGGDRPGVVPRGSQGLALATLCTLLFLTFLDN
Ga0318516_102872571	3300031543	Soil	VARQAETVSGDRPRGGVVPRGGQALALATLCTLLFLT
Ga0318573_107038822	3300031564	Soil	LARPVETVSGDQYGREGIVARGGQSLALATLCTLLFLTFLDNTVVSVALG
Ga0310915_111267842	3300031573	Soil	LARPVETVPGDQYGRAGIVARGGQSLALATLCTLLFLTFLDNTVVSVALG
Ga0318542_103188771	3300031668	Soil	MARQAETVSGDRHRGGVIPRGGQGLALATLCTLLF
Ga0318542_103989012	3300031668	Soil	LASQAEAVSQDGVVPRGGQALALATLCTLLFLTFLDNTVVAVALGDI
Ga0318572_101318311	3300031681	Soil	VARQAETVSGDRPRGGVVPRGGQALALATLCTLLFLTFLD
Ga0310686_1063396732	3300031708	Soil	LARPVEAVSGDQHGGERPVVRGGQSLALATLCTLLFLTFLD
Ga0310686_1188714811	3300031708	Soil	LARSAEAVSGGQHGEGITAGRGQSLALLTLCTLLFLTFLDNTVVSVALG
Ga0307469_110620231	3300031720	Hardwood Forest Soil	VASQAEAVSGDRPGGGVLPRGSQALALTTLCTLLFLTFLDNTVVSVALG
Ga0318501_103067621	3300031736	Soil	MARQAETVSGDRHRGGVIPRGGQGLALATLCTLLFLTFLDNTVVS
Ga0318502_103970262	3300031747	Soil	MARPVETVSGDQRAIVIRGGQSLALATLCTLLFLTFLD
Ga0307477_105113981	3300031753	Hardwood Forest Soil	LASQAEAVSGESHDGAGIVARGGRSLALATLCTLLFLTFLDN
Ga0318526_100647471	3300031769	Soil	VARQAETVSGDRPRGGVVPRGGQALALATLCTLLFLTFLDNTVV
Ga0318547_106682331	3300031781	Soil	VARQAETVSGDRPRGGVVPRGGQALALATLCTLLFLTFLDNTVVA
Ga0318557_103554062	3300031795	Soil	VARQAETVSGDRPRGGVVPGGGQALALATLCTLLFLT
Ga0318576_101863823	3300031796	Soil	VTSQAEALSGDRPQGSVVPRGGQALALGTLCTLLFLTFLDNTVVAV
Ga0318568_108727222	3300031819	Soil	MASQAEAVSGDRHGAGSAVARGGQTLALATLCTLL
Ga0318567_100607355	3300031821	Soil	LARPVETVPGDQYGRAGIVARGGQSLALATLCTLLFLTFLDN
Ga0318564_101727121	3300031831	Soil	MARPVETVSGNQRTIVIRGGQSLALATLCTLLFLTFLDNTVVSV
Ga0306925_121364611	3300031890	Soil	VARQETVSGDRAPGGSMPRGGQALALATLCTLLFLTFL
Ga0318562_104932222	3300032008	Soil	MAGPVETVSSGQPGIVARGGQSLALATLCTLLFLTFLDNTVVSVA
Ga0318563_101975661	3300032009	Soil	VARQAETVSGDRPRGGVVPGGGQALALATLCTLLFLTFLDN
Ga0318569_102294272	3300032010	Soil	MAGPVETVRGDQHGGEGVSARRGGQSLALAVLCTLLFLTFLDNPVV
Ga0318513_101710983	3300032065	Soil	VTSQAEALSGDRPQGSVVPRGGQALALGTLCTLLFLTFLDNTVVAVALGD
Ga0318514_103497032	3300032066	Soil	MARQAETVSGDRHRGGVIPRGGQGLALATLCTLLFLTFLDNT
Ga0318524_102340733	3300032067	Soil	VARQETVSGDRAPGGSMPRGGQALALATLCTLLFLTFLDNTVVA
Ga0318524_107366822	3300032067	Soil	LASQAEAVSQDGVVPRGGQALALATLCTLLFLTFLDNTVVAVAL
Ga0318518_105372772	3300032090	Soil	VTSQAEALSGDRPQGSVVPRGGQALALGTLCTLLFLTFLDNTVVAVALGDIQ
Ga0306920_1026548522	3300032261	Soil	MARPVETVSGDQRAIVIRGGQSLALATLCTLLFLTFLDNTVVSVAL
Ga0335085_103549521	3300032770	Soil	LASQAEAVSGDRHGAGGVGPRGGQALALATLCTLLFLTFLD
Ga0335085_114301162	3300032770	Soil	VTSQAEAVSGGRPGRAVPRGGQALALGTLCTLLFLTFLD
Ga0335082_104779491	3300032782	Soil	VARQETVSGDRARGGSIPRGGQALALGTLCTLLFLTFLDNTVVAVALGDI
Ga0335079_123038292	3300032783	Soil	MARPVETVPGGPQGTAARSGQSLALATLCTLLFLTFLDNTV
Ga0335080_104727624	3300032828	Soil	VASQAEAVSGDRHEEPGTGIVPRGGQALALATLCTLLFLTFL
Ga0335070_103667531	3300032829	Soil	VARQETVSGDRARGGPIPRGGQALALGTLCTLLFLTFL
Ga0335081_123791752	3300032892	Soil	LASQAEAVSGDRHGEGGVAPRGGQALALATLCTLLF
Ga0335083_113982392	3300032954	Soil	MARQAETFYGDRPRGGVVPRGGQALALATLCTLLFLTFLDNTVVSVALGD
Ga0335073_105740864	3300033134	Soil	MARPVETVPGGPQGTAARSGQSLALATLCTLLFLTFLD
Ga0335077_106886553	3300033158	Soil	LARQARAVSGDRRGEDEIVPRRGRSLALGTLCALLFLTFLDNTVVSVALG
Ga0314865_204965_396_530	3300033806	Peatland	MASQAEAVSGDRPQGGVVPRGGQALALATLCTLLFLTFLDNTVVS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F042059

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences