Metagenome / Metatranscriptome Family F041973

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F041973
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	62 residues
Representative Sequence	SNTISIVDTLSSPFKTHQTLGIPGSPTFGVAIDQFTNLAVIVDQANNRVLLFPMPN
Number of Associated Samples	132
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.63 %
% of genes near scaffold ends (potentially truncated)	97.48 %
% of genes from short scaffolds (< 2000 bps)	87.42 %
Associated GOLD sequencing projects	125
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.371 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.384 % of family members)
Environment Ontology (ENVO)	Unclassified (31.447 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.006 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 21.43% Coil/Unstructured: 78.57%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF03938	OmpH	57.86
PF00596	Aldolase_II	2.52
PF12833	HTH_18	1.26
PF03928	HbpS-like	1.26
PF04014	MazE_antitoxin	0.63
PF02576	RimP_N	0.63
PF02423	OCD_Mu_crystall	0.63
PF03466	LysR_substrate	0.63
PF01810	LysE	0.63
PF12704	MacB_PCD	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG2825	Periplasmic chaperone for outer membrane proteins, Skp family	Cell wall/membrane/envelope biogenesis [M]	57.86
COG0779	Ribosome maturation factor RimP	Translation, ribosomal structure and biogenesis [J]	0.63
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.37 %
Unclassified	root	N/A	0.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.37 %
Unclassified	root	N/A	0.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.37 %
Unclassified	root	N/A	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	90.57 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.63 %
Unclassified	root	N/A	0.63 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.24 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.03 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.63 %
Unclassified	root	N/A	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.24 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	3.14 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.63 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.63 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.63 %
Unclassified	root	N/A	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.24 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	3.14 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.63 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.63 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.63 %
Unclassified	root	N/A	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.24 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	3.14 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.63 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.63 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.63 %
Unclassified	root	N/A	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.24 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2.52 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.63 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.63 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.63 %
Unclassified	root	N/A	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.24 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2.52 %
Mycobacterium tuberculosis complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex	0.63 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.63 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.63 %
Unclassified	root	N/A	0.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.24 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2.52 %
Mycobacterium tuberculosis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	0.63 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.63 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.63 %
Unclassified	root	N/A	0.63 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_103278874	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300000955\|JGI1027J12803_103578052	All Organisms → cellular organisms → Bacteria → Acidobacteria	643	Open in IMG/M
3300002906\|JGI25614J43888_10033410	All Organisms → cellular organisms → Bacteria	1614	Open in IMG/M
3300003372\|JGI26336J50218_1003111	All Organisms → cellular organisms → Bacteria → Acidobacteria	1019	Open in IMG/M
3300004118\|Ga0058886_1351797	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300004120\|Ga0058901_1566080	All Organisms → cellular organisms → Bacteria → Acidobacteria	1077	Open in IMG/M
3300004635\|Ga0062388_101801055	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300005166\|Ga0066674_10191414	All Organisms → cellular organisms → Bacteria → Acidobacteria	973	Open in IMG/M
3300005332\|Ga0066388_105511910	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	641	Open in IMG/M
3300005467\|Ga0070706_100166292	All Organisms → cellular organisms → Bacteria → Acidobacteria	2059	Open in IMG/M
3300005540\|Ga0066697_10216435	All Organisms → cellular organisms → Bacteria → Acidobacteria	1138	Open in IMG/M
3300005540\|Ga0066697_10515283	All Organisms → cellular organisms → Bacteria → Acidobacteria	676	Open in IMG/M
3300005556\|Ga0066707_10016702	All Organisms → cellular organisms → Bacteria	3796	Open in IMG/M
3300005575\|Ga0066702_10988263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium tuberculosis	503	Open in IMG/M
3300005614\|Ga0068856_101488052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300005841\|Ga0068863_100291734	All Organisms → cellular organisms → Bacteria → Acidobacteria	1581	Open in IMG/M
3300005993\|Ga0080027_10025495	All Organisms → cellular organisms → Bacteria	2109	Open in IMG/M
3300006162\|Ga0075030_100779772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300006173\|Ga0070716_100134175	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300006173\|Ga0070716_100892282	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300006791\|Ga0066653_10132961	All Organisms → cellular organisms → Bacteria → Acidobacteria	1185	Open in IMG/M
3300006800\|Ga0066660_10320607	All Organisms → cellular organisms → Bacteria → Acidobacteria	1246	Open in IMG/M
3300006800\|Ga0066660_10650534	All Organisms → cellular organisms → Bacteria → Acidobacteria	874	Open in IMG/M
3300006804\|Ga0079221_11412653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300006806\|Ga0079220_10036221	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2228	Open in IMG/M
3300006806\|Ga0079220_10229650	All Organisms → cellular organisms → Bacteria → Acidobacteria	1095	Open in IMG/M
3300006806\|Ga0079220_10309284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	981	Open in IMG/M
3300006806\|Ga0079220_10402374	All Organisms → cellular organisms → Bacteria → Acidobacteria	895	Open in IMG/M
3300006852\|Ga0075433_10317933	All Organisms → cellular organisms → Bacteria → Acidobacteria	1377	Open in IMG/M
3300006953\|Ga0074063_13360226	All Organisms → cellular organisms → Bacteria → Acidobacteria	1144	Open in IMG/M
3300007255\|Ga0099791_10430036	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300009088\|Ga0099830_11005309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300009088\|Ga0099830_11068269	All Organisms → cellular organisms → Bacteria → Acidobacteria	669	Open in IMG/M
3300009089\|Ga0099828_12000436	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300009137\|Ga0066709_100330457	All Organisms → cellular organisms → Bacteria → Acidobacteria	2085	Open in IMG/M
3300009521\|Ga0116222_1490414	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300009792\|Ga0126374_10611943	All Organisms → cellular organisms → Bacteria → Acidobacteria	806	Open in IMG/M
3300010046\|Ga0126384_10507533	All Organisms → cellular organisms → Bacteria → Acidobacteria	1040	Open in IMG/M
3300010320\|Ga0134109_10424104	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300010323\|Ga0134086_10173915	All Organisms → cellular organisms → Bacteria → Acidobacteria	795	Open in IMG/M
3300010358\|Ga0126370_10045627	All Organisms → cellular organisms → Bacteria → Acidobacteria	2751	Open in IMG/M
3300010358\|Ga0126370_11726687	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300010358\|Ga0126370_11786815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300010359\|Ga0126376_11470746	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300010361\|Ga0126378_10377566	All Organisms → cellular organisms → Bacteria	1529	Open in IMG/M
3300010361\|Ga0126378_12168354	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300010376\|Ga0126381_103959449	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300010398\|Ga0126383_10031832	All Organisms → cellular organisms → Bacteria → Acidobacteria	4196	Open in IMG/M
3300010398\|Ga0126383_10298484	All Organisms → cellular organisms → Bacteria → Acidobacteria	1608	Open in IMG/M
3300010398\|Ga0126383_13153616	Not Available	538	Open in IMG/M
3300010858\|Ga0126345_1268405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300011120\|Ga0150983_11470810	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300011120\|Ga0150983_12534589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1150	Open in IMG/M
3300011120\|Ga0150983_16263015	All Organisms → cellular organisms → Bacteria → Acidobacteria	750	Open in IMG/M
3300012202\|Ga0137363_11655921	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300012207\|Ga0137381_11034931	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300012351\|Ga0137386_10499284	All Organisms → cellular organisms → Bacteria → Acidobacteria	876	Open in IMG/M
3300012361\|Ga0137360_10021505	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4319	Open in IMG/M
3300012362\|Ga0137361_10428849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1215	Open in IMG/M
3300012385\|Ga0134023_1126431	All Organisms → cellular organisms → Bacteria → Acidobacteria	739	Open in IMG/M
3300012582\|Ga0137358_10304358	All Organisms → cellular organisms → Bacteria → Acidobacteria	1082	Open in IMG/M
3300012917\|Ga0137395_10464109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300012918\|Ga0137396_10030493	All Organisms → cellular organisms → Bacteria	3564	Open in IMG/M
3300012923\|Ga0137359_11627901	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300012923\|Ga0137359_11642321	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300012948\|Ga0126375_10243957	All Organisms → cellular organisms → Bacteria → Acidobacteria	1212	Open in IMG/M
3300014166\|Ga0134079_10680401	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300014325\|Ga0163163_10290199	All Organisms → cellular organisms → Bacteria → Acidobacteria	1688	Open in IMG/M
3300015053\|Ga0137405_1134582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2881	Open in IMG/M
3300015359\|Ga0134085_10626719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300015372\|Ga0132256_101212846	All Organisms → cellular organisms → Bacteria → Acidobacteria	868	Open in IMG/M
3300016319\|Ga0182033_12152413	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300016341\|Ga0182035_10793848	All Organisms → cellular organisms → Bacteria → Acidobacteria	830	Open in IMG/M
3300016404\|Ga0182037_10017180	All Organisms → cellular organisms → Bacteria → Acidobacteria	4339	Open in IMG/M
3300016404\|Ga0182037_10184112	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1606	Open in IMG/M
3300017657\|Ga0134074_1355940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300017930\|Ga0187825_10269746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300017955\|Ga0187817_10064949	All Organisms → cellular organisms → Bacteria	2263	Open in IMG/M
3300017955\|Ga0187817_10104445	All Organisms → cellular organisms → Bacteria	1784	Open in IMG/M
3300017955\|Ga0187817_10788223	All Organisms → cellular organisms → Bacteria → Acidobacteria	607	Open in IMG/M
3300017994\|Ga0187822_10100218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	883	Open in IMG/M
3300018064\|Ga0187773_10321506	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300018085\|Ga0187772_10239848	All Organisms → cellular organisms → Bacteria → Acidobacteria	1228	Open in IMG/M
3300020061\|Ga0193716_1201624	All Organisms → cellular organisms → Bacteria → Acidobacteria	756	Open in IMG/M
3300020579\|Ga0210407_10632865	All Organisms → cellular organisms → Bacteria → Acidobacteria	832	Open in IMG/M
3300020582\|Ga0210395_10077754	All Organisms → cellular organisms → Bacteria → Acidobacteria	2444	Open in IMG/M
3300020583\|Ga0210401_10345885	All Organisms → cellular organisms → Bacteria → Acidobacteria	1348	Open in IMG/M
3300020583\|Ga0210401_10674599	All Organisms → cellular organisms → Bacteria → Acidobacteria	894	Open in IMG/M
3300021170\|Ga0210400_11616665	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300021178\|Ga0210408_10557569	All Organisms → cellular organisms → Bacteria → Acidobacteria	909	Open in IMG/M
3300021180\|Ga0210396_10573865	All Organisms → cellular organisms → Bacteria → Acidobacteria	982	Open in IMG/M
3300021401\|Ga0210393_10515893	All Organisms → cellular organisms → Bacteria → Acidobacteria	976	Open in IMG/M
3300021401\|Ga0210393_10619651	All Organisms → cellular organisms → Bacteria → Acidobacteria	883	Open in IMG/M
3300021403\|Ga0210397_11523552	All Organisms → cellular organisms → Bacteria → Acidobacteria	519	Open in IMG/M
3300021407\|Ga0210383_10457268	All Organisms → cellular organisms → Bacteria → Acidobacteria	1102	Open in IMG/M
3300021420\|Ga0210394_11057234	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300021420\|Ga0210394_11453096	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300021475\|Ga0210392_11005655	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300021477\|Ga0210398_11267923	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300021560\|Ga0126371_12729744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	599	Open in IMG/M
3300021938\|Ga0213847_1237591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300022504\|Ga0242642_1057318	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300022532\|Ga0242655_10021634	All Organisms → cellular organisms → Bacteria → Acidobacteria	1384	Open in IMG/M
3300022716\|Ga0242673_1047678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300022717\|Ga0242661_1151489	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300022724\|Ga0242665_10109311	All Organisms → cellular organisms → Bacteria → Acidobacteria	830	Open in IMG/M
3300024182\|Ga0247669_1014431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1404	Open in IMG/M
3300024186\|Ga0247688_1047775	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300024325\|Ga0247678_1077006	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300024330\|Ga0137417_1450472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300024347\|Ga0179591_1149961	All Organisms → cellular organisms → Bacteria	4912	Open in IMG/M
3300025915\|Ga0207693_11073867	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300025928\|Ga0207700_11564018	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300025939\|Ga0207665_11093171	All Organisms → cellular organisms → Bacteria → Acidobacteria	635	Open in IMG/M
3300026088\|Ga0207641_10284209	All Organisms → cellular organisms → Bacteria → Acidobacteria	1557	Open in IMG/M
3300026281\|Ga0209863_10035768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1493	Open in IMG/M
3300026310\|Ga0209239_1148181	All Organisms → cellular organisms → Bacteria → Acidobacteria	936	Open in IMG/M
3300026326\|Ga0209801_1152745	All Organisms → cellular organisms → Bacteria → Acidobacteria	972	Open in IMG/M
3300026342\|Ga0209057_1030596	All Organisms → cellular organisms → Bacteria	2832	Open in IMG/M
3300026342\|Ga0209057_1036513	All Organisms → cellular organisms → Bacteria	2500	Open in IMG/M
3300026356\|Ga0257150_1055379	All Organisms → cellular organisms → Bacteria → Acidobacteria	590	Open in IMG/M
3300026523\|Ga0209808_1082666	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300026551\|Ga0209648_10416082	All Organisms → cellular organisms → Bacteria → Acidobacteria	867	Open in IMG/M
3300027109\|Ga0208603_1046396	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300027701\|Ga0209447_10024104	All Organisms → cellular organisms → Bacteria → Acidobacteria	1705	Open in IMG/M
3300027737\|Ga0209038_10093195	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300027765\|Ga0209073_10113040	All Organisms → cellular organisms → Bacteria → Acidobacteria	971	Open in IMG/M
3300027795\|Ga0209139_10140648	All Organisms → cellular organisms → Bacteria → Acidobacteria	853	Open in IMG/M
3300027889\|Ga0209380_10413667	All Organisms → cellular organisms → Bacteria → Acidobacteria	790	Open in IMG/M
3300027898\|Ga0209067_10213811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300029701\|Ga0222748_1097917	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300030862\|Ga0265753_1012663	All Organisms → cellular organisms → Bacteria → Acidobacteria	1140	Open in IMG/M
3300031057\|Ga0170834_109266030	All Organisms → cellular organisms → Bacteria → Acidobacteria	680	Open in IMG/M
3300031090\|Ga0265760_10041174	All Organisms → cellular organisms → Bacteria → Acidobacteria	1377	Open in IMG/M
3300031573\|Ga0310915_10062831	All Organisms → cellular organisms → Bacteria → Acidobacteria	2426	Open in IMG/M
3300031708\|Ga0310686_100114569	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300031740\|Ga0307468_101363727	All Organisms → cellular organisms → Bacteria → Acidobacteria	649	Open in IMG/M
3300031744\|Ga0306918_10183185	All Organisms → cellular organisms → Bacteria → Acidobacteria	1569	Open in IMG/M
3300031748\|Ga0318492_10722940	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300031751\|Ga0318494_10628903	All Organisms → cellular organisms → Bacteria → Acidobacteria	628	Open in IMG/M
3300031753\|Ga0307477_10094272	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2079	Open in IMG/M
3300031753\|Ga0307477_10218845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1322	Open in IMG/M
3300031753\|Ga0307477_10587483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300031754\|Ga0307475_10151368	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1842	Open in IMG/M
3300031763\|Ga0318537_10409960	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300031779\|Ga0318566_10349254	All Organisms → cellular organisms → Bacteria → Acidobacteria	730	Open in IMG/M
3300031820\|Ga0307473_10411355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300031823\|Ga0307478_10220121	All Organisms → cellular organisms → Bacteria → Acidobacteria	1533	Open in IMG/M
3300031845\|Ga0318511_10570134	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300031879\|Ga0306919_10247954	All Organisms → cellular organisms → Bacteria → Acidobacteria	1339	Open in IMG/M
3300031945\|Ga0310913_10810158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300031959\|Ga0318530_10367006	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300031962\|Ga0307479_10178466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2089	Open in IMG/M
3300031962\|Ga0307479_10696166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M
3300031962\|Ga0307479_11836071	All Organisms → cellular organisms → Bacteria → Acidobacteria	557	Open in IMG/M
3300032076\|Ga0306924_10224827	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2155	Open in IMG/M
3300032180\|Ga0307471_100444120	All Organisms → cellular organisms → Bacteria → Acidobacteria	1435	Open in IMG/M
3300032828\|Ga0335080_10625418	All Organisms → cellular organisms → Bacteria → Acidobacteria	1129	Open in IMG/M
3300033289\|Ga0310914_10190555	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1827	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.23%
Host-Associated	Host-Associated	3.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.05%
Aquatic	Environmental → Aquatic	8.18%
Plants	Host-Associated → Plants	3.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.05%
Freshwater	Environmental → Aquatic → Freshwater	6.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.89%
Sediment	Environmental → Aquatic → Sediment	1.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.26%
Roots	Host-Associated → Plants → Roots	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.10%
Loam	Environmental → Terrestrial → Soil → Loam	8.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.29%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.26%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.63%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.63%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.14%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.14%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.26%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.26%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.63%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.77%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.14%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.52%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.26%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.26%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.26%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.26%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.63%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.63%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.63%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.63%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300003372	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1	Environmental	Open in IMG/M
3300004118	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF208 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004120	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF238 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012385	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020061	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021938	Metatranscriptome of freshwater microbial communities from pre-fracked creek in Pennsylvania, United States - EE:C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024186	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1032788741	3300000955	Soil	PQTGGIMTINFTSQTVSIIDTISNPFTTRRSYGLGGSAQFGIAIDQFTNMAVLADQANNRVLIFPLPN*
JGI1027J12803_1035780521	3300000955	Soil	IVTINSAGQTISIIDTISNPFKTRKSFGLGGSSQFGVAIDQFTNLAVIADQANNRVLIFPIPN*
JGI25614J43888_100334101	3300002906	Grasslands Soil	GKSASVVDTITNPKTVQTLGFPGSAQFGVAIDQFTNLAVIVDSANNRVLLFPMPN*
JGI26336J50218_10031112	3300003372	Bog Forest Soil	SLVDTTAAPLKSVKTFGISGSPQFGVAIDQFTNLAFIVDQGNNRLLIFPVPN*
Ga0058886_13517971	3300004118	Forest Soil	LAGKTTSLVDTTSSPLKTVKTLGLPGSGQFGVAIDQFTNLAVIVDQANNRLLIFPMPN*
Ga0058901_15660801	3300004120	Forest Soil	TSLVDTSASPLKTIGTIGLPGSPQFGVAIDQFTNLAVIVDQANNRVFIFPMPN*
Ga0062388_1018010552	3300004635	Bog Forest Soil	AGKTTSLVDTTSSPLKTVKTIGLPGSGQFGVAIDQFTNLAVIVDQANNRLLIFAMPN*
Ga0066674_101914142	3300005166	Soil	NPQTGAILTSNSASNTISIVDSISNPFKTQQTLGIPGSPTFGVAIDEFTNLAVIVDQANMRVLLFPMPN*
Ga0066388_1055119101	3300005332	Tropical Forest Soil	ISIVDTISNPFQTRQTLGIPGSSRFGVAIDQFTNLAVIVDQANMRVLLFPMPN*
Ga0070706_1001662924	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	IVDTLSNPFKTRRTFGLGGSAQFGIAIDQFTNMAVIADQAHNRLLIFPMPN*
Ga0066697_102164353	3300005540	Soil	TISIVDTLSSPFKTHQTLGIPGSPTFGVAIDQFTNLAVIVDQANNRVLLFPMPN*
Ga0066697_105152831	3300005540	Soil	SIVDTISSPFKTHQTLGIPGSPTFGVAIDQFTNLAVIVDQANMRVLLFPMPN*
Ga0066707_100167021	3300005556	Soil	PTSLAINPQTGAILTSNSASNTISIVDSISNPFKTQQTLGIPGSPTFGVAIDQFTNLAVIVDQANMRVLLFPMPN*
Ga0066702_109882631	3300005575	Soil	GGSSVSVGVNPTSLAINPQTGAMLTANSASNTISIVDTIASPFKTHQTLGIPGSPTFGVAIDQFTNLAVIVDQANMRVLLFPMPN*
Ga0068856_1014880522	3300005614	Corn Rhizosphere	VVDTLSGARTVETLGQPGSAQFGVAIDQFTNLAVVVDQANNRVLLLPMPN*
Ga0068863_1002917341	3300005841	Switchgrass Rhizosphere	IIDTVSSPFTTRRTYGLGGSAQFGVAIDQFTNLAVLADQANNRVLIFPMPN*
Ga0080027_100254953	3300005993	Prmafrost Soil	AGKSASVVDTVSGAKTVQTLGLPGSAQFGVAIDQFSNLAVVVDQANNRVLLFPMPN*
Ga0075030_1007797721	3300006162	Watersheds	VDTLSNPLKTRQTFGIPGSSTFGVAVDQFTNLAVIVDQAHNRVLLFPMPN*
Ga0070716_1001341753	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	AINPQTGGIMTVNSTSQTISIIDTISNPFKTRRTFGIGGSAQFGVAIDQFTNLAVIADQANNRVLIFPVPN*
Ga0070716_1008922822	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	TALAINPQTGAILTSNFAGKSASIVDTVSTLKTVQTYGLPGSAQFGVAIDQFTNLAVIVDQAHNRLLLFPMPN*
Ga0066653_101329613	3300006791	Soil	ASNTISIVDTLSSPFKTHQTLGIPGSPTFGVAIDQFTNLAVIVDQANDRVLLFPMPN*
Ga0066660_103206073	3300006800	Soil	STSQTISIIDTISNPFKTRSSFGISGSAQFAVAIDQFTNLAVIADQAHNRLLIFPMPN*
Ga0066660_106505341	3300006800	Soil	IMTVNSTSQTISIIDTISNPFKTRRTFGIGGSAQFGVAIDQFTNLAVIADQANNRVLIFPVPN*
Ga0079221_114126531	3300006804	Agricultural Soil	IVDTISSPFKTHQTLGIPGSPTFGVAIDQFTNLAVIVDQANMRVLLFPMPN*
Ga0079220_100362213	3300006806	Agricultural Soil	NPETGAILTTNFAGKTTSLVDTTSNPLKTVKTIGLPGSAQFGVAIDQFTNLAVIVDQANNRLLIFPMPN*
Ga0079220_102296501	3300006806	Agricultural Soil	TSNSASNTISIVDTLSNPFRTLQTLGFPGSATFGVAVDQFTNLAVIVDQANMRVLLFPMPN*
Ga0079220_103092841	3300006806	Agricultural Soil	TASIVDTISSPFKTHQTLGIPGSPTFGVAIDQFTNLAVIVDQANMRVLLFPMPN*
Ga0079220_104023741	3300006806	Agricultural Soil	PTSLAVNPQTGAMLTANSASNTVSIVDTLSSPFKTRQTLGIPGSPTFGVAIDQFTNLAVIVDQANMRVLLFPMPN*
Ga0075433_103179333	3300006852	Populus Rhizosphere	TSQTVSIVDTLSNPFKTRRTFGLGGSAQFGIAIDQFTNMAVIADQAHNRLLIFPMPN*
Ga0074063_133602261	3300006953	Soil	LNSLSKTVSIIDTLTSPFKTRRSYGLPGSPTLGVAIDQFLNLAVIVDQANNRVFLFPMPN
Ga0099791_104300362	3300007255	Vadose Zone Soil	LTTNFGGKSASIVDTVTSPKTVQTLGLPGSAQFGVAIDQFTNLAVIVDQANNRVLLFPMPN*
Ga0099830_110053091	3300009088	Vadose Zone Soil	NPTSLAVNPQTGAILTANSASNTISIVDSLSLPFKTHQTLGIPGSPTFGVAIDPFTNLGVIVDQANSRVFLFPMPN*
Ga0099830_110682691	3300009088	Vadose Zone Soil	GINPTSLAVNPQTGAILTANTASNTISIVNTLGSPLKTVQTLGLPGSPLFGVAVDQFTNLAVIVDQANQRVLLFPMPN*
Ga0099828_120004361	3300009089	Vadose Zone Soil	TGALLTANVASKTISIVDTTSNPFKTRQTLGLPGSPLFGVAIDQFTNLAVIVDQANNRVFLFPMPN*
Ga0066709_1003304571	3300009137	Grasslands Soil	TGGIMTVNSTSQTISIIDTISNPFKTRRTFGIGGSAQFGVAIDQFTNLAVIADQANNRVLIFPVPN*
Ga0116222_14904141	3300009521	Peatlands Soil	INPETGALLTTNLAGKTSSLVDTTSSPLRTVKTIGLPGSGQFGVAIDPFTNLAVIVDQANNRLLLFAMPN*
Ga0126374_106119432	3300009792	Tropical Forest Soil	VSIVDTVSSPFKTHQTLGIPGSPTFGVAIDQFTNLAVIVDQANMRVLLFPMPN*
Ga0126384_105075331	3300010046	Tropical Forest Soil	IMTINFTGQTVSIIDTISNPFTTRRTYGLGGSAQFGVAIDQFTNLAVLADQANNRVLIFPVPN*
Ga0134109_104241041	3300010320	Grasslands Soil	IIDTISNPFKTRSSFGISGSAQFAVAIDQFTNLAVIADQAHNRLLIFPMPN*
Ga0134086_101739152	3300010323	Grasslands Soil	SNSASNTISIVDTLSSPFKTHQTLGIPGSPTFGVAIDQFTNLAVIVDQANDRVLLFPMPN
Ga0126370_100456271	3300010358	Tropical Forest Soil	IVDTISIPLKTRQTLGIPGSPTFGVAIDQFTNLAVIVDQANMRVFLFPMPN*
Ga0126370_117266872	3300010358	Tropical Forest Soil	PQTGAILTLNSLSNTVSIVDTLTSPFKTRRSYGLPGSPTLGVAIDQFLNLAVVVDQAHNRVFIFPMPN*
Ga0126370_117868152	3300010358	Tropical Forest Soil	ILTSNFGSNTVSVVDTVSSPFKTHQTLGIPGSPTFGVAIDQFTNLAVIVDQANMRVLLFPMPN*
Ga0126376_114707461	3300010359	Tropical Forest Soil	KSASVVDTLSGARTIQTLGFPGSAQFGTAIDQFTNLAVIVDQANLRVLLLPMPN*
Ga0126378_103775663	3300010361	Tropical Forest Soil	TANSASNTISIVDTIPSLLKTRQTLGIPGSPTFGVAIDQFTNLAVIVDQANMRVFLFPMPN*
Ga0126378_121683541	3300010361	Tropical Forest Soil	INPQTGAILTSNSASNTISIVDTISNPFQTRQTLGLPGSPTFGVTIDQFTNLAIIVDQANMRVLLFPMPN*
Ga0126381_1039594491	3300010376	Tropical Forest Soil	IIDTVSNPFTTRRTYGLGGSAQFGVAIDQFTNLAVLADQANNRVLIFPVPN*
Ga0126383_100318321	3300010398	Tropical Forest Soil	SSVNVGVNPTSLAINPQTGAILTSNSASNTISIVDTISNPFQTRQTLGLPGSPTFGVTIDQFTNLAIIVDQANMRVLLFPMPN*
Ga0126383_102984841	3300010398	Tropical Forest Soil	QTGGIMTVNFAGQSVSIIDTVSNPFTTRRTYGLPGSAQFGIAIDQFTNQAVLADQANNRVLIFPVPN*
Ga0126383_131536161	3300010398	Tropical Forest Soil	PQTGAILTVNTASNTISIVDTLSSPFRTRATLGISGSGQYGAAIHARTNMGFIADPANKRVLLFPMP*
Ga0126345_12684051	3300010858	Boreal Forest Soil	TASLVDTTSSPLRTVKTIGLPGSGQFGVAIDQFTNLAVIVDQANNRVLIFPMPN*
Ga0150983_114708103	3300011120	Forest Soil	NPETGAILTTNLAGKTTSLVDTTSSPLKTVKTIGLPGSGQFGVAIDQFTNLALIVDQANNRLLIFPMPN*
Ga0150983_125345891	3300011120	Forest Soil	TISIVDTISNPFRTRQTLGLPGSPQFGVAIDQFTNLAVIVDQANNRVFLFQMPN*
Ga0150983_162630151	3300011120	Forest Soil	INPETGAILTTNLAGQSTSLVDITSSPLKTVKTIGLPGSAQFGVAIDQFTNIAVIVDQANNRLLLFALPN*
Ga0137363_116559211	3300012202	Vadose Zone Soil	TSNFAGKSASIVDTVSSPIKTVQTLGLPGSAQFGVAIDAFTNLAVIVDQANNRVLLFPMPN*
Ga0137381_110349312	3300012207	Vadose Zone Soil	LTSNSASNTVSIVDTISSPFKTHQTLGIPGSPTFGVAIDQFTNLAVIVDQANMRVLLFPMPN*
Ga0137386_104992841	3300012351	Vadose Zone Soil	LALNPQTGAILTANSISNTISIVDTLTSPFKTRRSFGIPGSPQLGVAIDQFLNLAVIADQANDRVLLFPMPN*
Ga0137360_100215055	3300012361	Vadose Zone Soil	AILTTNLAGKTTSLVDTTSSPLRTVKTIGLPGSGQFGVAIDQFTNLAVIVDQANNRLLIFAMPN*
Ga0137361_104288491	3300012362	Vadose Zone Soil	SIVDTVTSPKTVQTLGLPGSAQFGVAIDQFTNLAVIVDQANNRVLLFPMPN*
Ga0134023_11264312	3300012385	Grasslands Soil	INPQTGAILTSNFGSNTVSIVDTISSPFKTHQTLGIPGSPTFGVAIDQFTNLAVIVDQANMRVLLFPMPN*
Ga0137358_103043582	3300012582	Vadose Zone Soil	TSQTISIIDTISNPFKTRRTFGIGGSAQFGVAIDQFTNLAVIADQANNRVLIFPVPN*
Ga0137395_104641091	3300012917	Vadose Zone Soil	NPQTGAILTSNSASNTISIVDTLSNPFKTRQTFGIPGSATFGVAIDQFTNLAVIVDQAHNRVLLFPMPN*
Ga0137396_100304931	3300012918	Vadose Zone Soil	LAVNPQTGAILTSNFAGKSASIVDTVSQVKTVQTLGLPGSAQFGVAIDQFTNLAVIVDQGHNRVLIFPMPN*
Ga0137359_116279011	3300012923	Vadose Zone Soil	SQTISIIDTISNPFKTRRTFGIGGSAQFGVAIDQFTNLAVIADQANNRVLIFPVPN*
Ga0137359_116423212	3300012923	Vadose Zone Soil	GKSASIVDTVSQVKTVQTLGLPGSAQFGVAIDQFTNLAVIVDQGHNRVLIFPMPN*
Ga0126375_102439571	3300012948	Tropical Forest Soil	IIDTISNPFTTRRSYGLGGSAQFGIAIDQFTNLAVLADQAHNRVLIFPLPN*
Ga0134079_106804011	3300014166	Grasslands Soil	NPQTGGIMTVNSTSQTISIIDTISNPFRTRRTFGIGGSAQFGVAIDQFTNLAVIADQANNRVLIFPVPN*
Ga0163163_102901993	3300014325	Switchgrass Rhizosphere	VSIVDTLSNPLKTRRTFGLSGSAQFGIAIDQFTNMAVIADQAHNRLLIFPMPN*
Ga0137405_11345825	3300015053	Vadose Zone Soil	NTISIVDTLSNPLKTRQTFGIPGSPTFGVALDQFTNLAVLVDQANNRVLLFPTPN*
Ga0134085_106267191	3300015359	Grasslands Soil	SNTISIVDTLSSPFKTHQTLGIPGSPTFGVAIDQFTNLAVIVDQANNRVLLFPMPN*
Ga0132256_1012128461	3300015372	Arabidopsis Rhizosphere	MTINFTGKTVSIIDAVANPFTTRRTYGLGGSAQFGIAIDQFTNLAVLADQANNRVLIFPVPN*
Ga0182033_121524131	3300016319	Soil	INPQTGAILTLNSLSNTVSVVDTLTSPFKTRRSYGLPGSPTLGVAIDQFLNLAVVVDQANNRVFIFPMPN
Ga0182035_107938481	3300016341	Soil	ISIVNTLSSPFKTQQTLGIPGSPTFGVAIDQFTNLAVIVDQANNRVLFFPMPH
Ga0182037_100171805	3300016404	Soil	ALNPQTGGIMTVNFAGQSVSIIDTVSNPFTTRRTYGLPGSAQFGIAIDQFTNQAVLADQANNRVLIFPVPN
Ga0182037_101841121	3300016404	Soil	NPQTGAILTSNSASNTISIVDTISNPFKTRQTLGIPGSSTFGVAIDQFTNLAVIVDQANMRVLLFPMPN
Ga0134074_13559401	3300017657	Grasslands Soil	TISIVDTLSSPFKTHQALGIPGSPTFGVAIDQFTNLAVIVDQANNRVLLFPMPN
Ga0187825_102697461	3300017930	Freshwater Sediment	ISIVDTLSNPFKTQKTLGIPGSPTFGVAIDQFTNLAVIVDQANQRILLFPMPN
Ga0187817_100649491	3300017955	Freshwater Sediment	ANSASNTISIVNSVSNPFKTQQTLGLPGSPTFGVAIDPFTNLAIIVDQAHSRVFLFPMPN
Ga0187817_101044451	3300017955	Freshwater Sediment	SNTISIVDSVSNPFKTQHTLGLPGSPTFGVAIDAFTNLGVIVDQAHSRVFLFPMPN
Ga0187817_107882231	3300017955	Freshwater Sediment	ASSTMSIVDTLSNPFKTRQTFGIPGSPTFGVAIDQFTNLTVIVDQAYNRVLLFPTPN
Ga0187822_101002181	3300017994	Freshwater Sediment	TGAILTTNLAGQTTSIVDTTSSPLKTVETFGLPGSGQFGVAIDQFTNLAVIVDQANNRLLIFPMPN
Ga0187773_103215061	3300018064	Tropical Peatland	SLAVNPQTGAILTSNSSSNTVSVVDILSSPFETRQTLGIPGFGTFGVAIDQFTNLAVIVDQAHQRVLLFPMPN
Ga0187772_102398482	3300018085	Tropical Peatland	GGLLTSNSLSNTASVVDIGSNPFKTHQTLGLPGSGTFGVAIDQFTNLAVIVDQANQRVFLFPMPN
Ga0193716_12016242	3300020061	Soil	SNVVGKSISIVDITSNPLKTRQTIGIPGSLQFGVAIDQFTNLAVIVDQANNRLLIFPMP
Ga0210407_106328651	3300020579	Soil	LGGKTTSLVDTTSSPLRTVKTIGLPGSGQFGVAIDQFTNLAVIVDQANNRVLIFPMPN
Ga0210395_100777543	3300020582	Soil	AMNPETGAILTTNVAGSTTSLVDTSASPLKTIGTIGLPGSPQFGVAIDQFTNLAVIVDQANSRVFIFPMPN
Ga0210401_103458851	3300020583	Soil	TNVAGKTTSLVDTSASPLKTIGTIGLPGSPQFGVAIDQFTNLAVIVDQANNRVLIFPMPN
Ga0210401_106745992	3300020583	Soil	DTTSSPLKTVKTIGLPGSGQFGVAIDQFTNLAVIVDQANNRLLIFPMPN
Ga0210400_116166651	3300021170	Soil	QTTSLVDTSASPLKTIGTIGLPGSPQFGVAIDQFTNLAVIVDQANNRVFIFPMPN
Ga0210408_105575692	3300021178	Soil	NFAGKSVSIVDSLSNPMKTRLTIGLPGSAQFGVAIDQFTNLAVIVDQANSRLLLFPMPN
Ga0210396_105738651	3300021180	Soil	GKTTSLVDTTSSPLKTVKTIGLPGSAQFGVAIDQFTNLAVIVDQANNRLLIFPMPN
Ga0210393_105158931	3300021401	Soil	AGKTTSLVDTTSSPLKTVKTIGLPGSGQFGVAIDQFTNLAVIVDQANNRLLIFPMPN
Ga0210393_106196511	3300021401	Soil	AGSTTSLVDTSASPLKTIGTIGLPGSPQFGVAIDQFTNLAVIVDQANNRVLIFPMPN
Ga0210397_115235522	3300021403	Soil	ILTSNFAGKSASVVDTVSQIKTANTLGLPGSAQFGVAIDPFTNLAVIVDQAHNRVLIFPMPN
Ga0210383_104572682	3300021407	Soil	VDTSASPLKTIGTIGLPGSPQFGVAIDQFTNLAVIVDQANNRVLIFPMPN
Ga0210394_110572342	3300021420	Soil	LNPQTGAILTSNSLSNTISIVDTISNPFRTRQTLGLPGSPQFGVAIDQFTNLAVIVDQANNRVFLFQMPN
Ga0210394_114530961	3300021420	Soil	PETGAILTTNVAGQTTSLVDTSASPLKTIGTIGLPGSPQFGVAIDQFTNLAVIVDQANNRVFIYPMPN
Ga0210392_110056552	3300021475	Soil	TNLAGKTTSLVDTTSSPLRTVKTIGLPGSGQFGVAIDPFTNLAVIVDQANNRLLIFAMPN
Ga0210398_112679232	3300021477	Soil	STTSLVDTSASPLKTIGTIGLPGSPQFGVAIDQFTNLAVIVDQANNRLLIFPMPN
Ga0126371_127297442	3300021560	Tropical Forest Soil	NPQTGALLTSNSASNTVSIVDTLSSPFKTHQTIGLPGSATFGVAIDQFTNLAVIVDQANMRVLLFPMPN
Ga0213847_12375911	3300021938	Watersheds	IVDTLSNPLKTRQTFGIPGSGTFGVAVDQFTNLAVLVDQSNNRVLLFPMPN
Ga0242642_10573181	3300022504	Soil	FAGKSASIVDTVASPIKTVQTLGLPGSAQFGVAIDQFTNLAVIVDQANNRVLLFPMPH
Ga0242655_100216342	3300022532	Soil	INPTAVAINPETGAILTTNVAGKTTSLVDTSASPLKTIGTIGLPGSPQFGVAIDQFTNLAVIVDQANNRVFIFPMPN
Ga0242673_10476781	3300022716	Soil	TISIVDTISNPFRTRQTLGLPGSPQFGVAIDQFTNLAVIVDQANNRIFLFQMPN
Ga0242661_11514892	3300022717	Soil	SLVDITSSPLKTVKTIGLPGSAQFGVAIDQFTNIAVIVDQANNRLLLFALPN
Ga0242665_101093111	3300022724	Soil	TSLVDTSASPLKTIGTIGLPGSPQFGVAIDQFTNLAVIVDQANNRVLIFPMPN
Ga0247669_10144313	3300024182	Soil	LVDTNSRPLKTVQTIGLPGSGQFGVAIDQFTNLAVIVDQANNRLLIFPMPN
Ga0247688_10477751	3300024186	Soil	TGAILTTNLAGKTTSIVDTTSNPLKTVQTLGLPGSGQFGVAIDQFTNLAVIVDQANNRLLIFPMPN
Ga0247678_10770061	3300024325	Soil	LTSNLAGKTASLVDTNSRPLKTVQTIGLPGSGQFGVAIDQFTNLAVIVDQANNRLLIFPMPN
Ga0137417_14504721	3300024330	Vadose Zone Soil	GKSASVVDTVTSPKTVQVQTLGLPGSAQFGVAIDQFTNLAVIVDQANNRVLLFPMPN
Ga0179591_11499616	3300024347	Vadose Zone Soil	VVGKSISIVDITSNPLKTRQTIGIPGSPQFGVAIDQFTNLAVIVDQANNRLLLFPMP
Ga0207693_110738671	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ASQTISIIDTVSNPFKTRSSFGLGGSSQFGAAIDQFTNLAVLADQANNRVLILQIPN
Ga0207700_115640181	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LAVNPESGAILTSNFGGRSASIVDTVSSPKTATTLGLPGSAQFGVAIDPFTNLAVIVDQANNRVLIFPMPN
Ga0207665_110931711	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	TALAINPQTGAILTSNFAGKSASIVDTVSTLKTVQTYGLPGSAQFGVAIDQFTNLAVIVDQAHNRLLLFPMPN
Ga0207641_102842093	3300026088	Switchgrass Rhizosphere	IIDTVSSPFTTRRTYGLGGSAQFGVAIDQFTNLAVLADQANNRVLIFPMPN
Ga0209863_100357681	3300026281	Prmafrost Soil	NFAGKSASVVDTVSGAKTVQTLGLPGSAQFGVAIDQFSNLAVVVDQANNRVLLFPMPN
Ga0209239_11481811	3300026310	Grasslands Soil	SNPTSLAINPQTGAILTSNSASNTISIVDSISNPFKTQQTLGIPGSPTFGVAIDEFTNLAVIVDQANMRVLLFPMPN
Ga0209801_11527451	3300026326	Soil	IMTVNSTSQTISIIDTISNPFKTRRTFGIGGSAQFGVAIDQFTNLAVIADQANNRVLIFPVPN
Ga0209057_10305961	3300026342	Soil	INPTSLAINPQTGAILTSNSASNTISIVDSISNPFKTQQTLGIPGSPTFGVAIDEFTNLAVIVDQANMRVLLFPMPN
Ga0209057_10365135	3300026342	Soil	SIVDTISSPFKTHQTLGIPGSPTFGVAIDQFTNLAVIVDQANMRVLLFPMPN
Ga0257150_10553791	3300026356	Soil	GALLTSNLGSKTASIVDMLSNPFKTRQTLGLPGSGQFGVAIDQFTNLAVIVDQANNRVLIFPMPN
Ga0209808_10826661	3300026523	Soil	SNFGSNTVSIVDTISSPFKTHQTLGIPGSPTFGVAIDQFTNLAVIVDQANMRVLLFPMPN
Ga0209648_104160822	3300026551	Grasslands Soil	TALAINPQSGAILTSNFGGKSASVVDTVTSPKTVQTLGLPGSAQFGVAIDQFTNLAVIVDQANNRLLLFPMPN
Ga0208603_10463962	3300027109	Forest Soil	DTSASPLKTVGTLGLPGSPQFGVAIDQFTNLAVIVDQANNRVLIFPMPN
Ga0209447_100241043	3300027701	Bog Forest Soil	QTISIVDMLSNPFKTRQTLGLPGSPQFGVAIDPFTNLAVIVDQANKRAFIFPMPN
Ga0209038_100931952	3300027737	Bog Forest Soil	IVDTSSSPLKTVGTFGLPGSPQFGVAIDQFTNLAVIVDQANNRLLIFPMPN
Ga0209073_101130401	3300027765	Agricultural Soil	TVSIVDTISSPFKTHQTLGIPGSPTFGVAIDQFTNLAVIVDQANMRVLLFPMPN
Ga0209139_101406481	3300027795	Bog Forest Soil	NPLTGALLTSNFGSQTISIVDMLSSPFKTRQTLGLPGSPQFGVAIDQFTNLAVIVDQAFNRAFIFPMPN
Ga0209380_104136672	3300027889	Soil	LAGKTTSLVDTTSSPLKTVKTIGLPGSGQFGVAIDQFTNLAVIVDQANNRLLIFAMPN
Ga0209067_102138111	3300027898	Watersheds	AVNSQTGAILTSNSASNTISIVDTLSNPLKTRQTFGIPGSSTFGVAVDQFTNLAVIVDQAHNRVLLFPMPN
Ga0222748_10979171	3300029701	Soil	TTSLVDTSASPLKTIGTIGLPGSPQFGVAIDQFTNLAVIVDQANNRVLIFPMPN
Ga0265753_10126631	3300030862	Soil	TTSLVDTSASPLKTIGTIGLPGSPQFGVAIDQFTNLAVIVDQANNRVFIYPMPN
Ga0170834_1092660301	3300031057	Forest Soil	LSNPFKTRSSFGLGGSAQFAIAIDQFTNLAVIADQANNRVLIFPVPN
Ga0265760_100411741	3300031090	Soil	AGQTTSLVDTSASPLKTIGTIGLPGSPQFGVAIDQFTNLAVIVDQANSRVFIYPMPN
Ga0310915_100628311	3300031573	Soil	INPQTGAILTSNTASNTVSIVDTISNPFQTRQTFGLPGSPTFGVAIDQFTNLAVIVDQANLRVLLFPMPN
Ga0310686_1001145691	3300031708	Soil	NPETGAILTTNVAGSTTSLVDTSASPLKTIGTIGLPGSPQFGVAIDQFTNLAVIVDQANSRVFIFPMPN
Ga0307468_1013637271	3300031740	Hardwood Forest Soil	ALNPETGAILTTNLAGKTSSLVDTTSSPLKTVKTIGLPGSGQFGVAIDQFTNIAVIVDQANNRLLLFAMPN
Ga0306918_101831853	3300031744	Soil	GIMTVNFAGQSVSIIDTVSNPFTTRRTYGLPGSAQFGIAIDQFTNQAVLADQANNRVLIFPVPN
Ga0318492_107229401	3300031748	Soil	TSNTASNTVSIVDTISNPFQTRQTFGLPGSPTFGVAIDQFTNLAVIVDQANLRVLLFPMP
Ga0318494_106289031	3300031751	Soil	GHSVSIIDTVSNPFTTRRTYGLPGSAQFGIAIDQFTNQAVLADQANNRVLIFPVPN
Ga0307477_100942721	3300031753	Hardwood Forest Soil	ISIVDTISNPFRTRQTLGLPGSPQFGVAIDQFTNLAVIVDQANNRIFLFQMPN
Ga0307477_102188451	3300031753	Hardwood Forest Soil	TALAVNPQSGAILTANFAGKSASIVDTVASPIRTVQTLGLPGSAQFGVAIDQFTNLAVIVDQANNRVFLFPMPH
Ga0307477_105874832	3300031753	Hardwood Forest Soil	TVASPIKTVKTLGLPGSAQFGVAIDQFTNLAVIVDQANNRVLLFPMPN
Ga0307475_101513683	3300031754	Hardwood Forest Soil	PTALALNPETGAILTTNLAGKTTSLVDTTSSPLKTVKTIGLPGSGQFGVAIDQFTNLAVIVDQANNRLLIFPMPN
Ga0318537_104099602	3300031763	Soil	PQTGAILTSNTASNTVSIVDTISNPFQTRRTFGLPGSPTFGVAIDQFTNLAVIVDQANLRVLLFPMPN
Ga0318566_103492542	3300031779	Soil	SNTASNTVSIVDTISNPFQTRQTFGLPGSPTFGVAIDQFTNLAVIVDQANLRVLLFPMPN
Ga0307473_104113552	3300031820	Hardwood Forest Soil	VDTLSNPFKTRQTFGIPGSATFGVAIDQFTNLAVIVDQANNRVLLFPMPN
Ga0307478_102201213	3300031823	Hardwood Forest Soil	PTALAINPETGAILTTNLAGQTSSLVDTTSSPLKTVKTIGLPGSAQFGVAIDPFTNLAVIVDQANNRLLLFAMPN
Ga0318511_105701341	3300031845	Soil	VNVGVNPTSLAINPQTGAILTSNTASNTVSIVDTISNPFQTRQTFGLPGSPTFGVAIDQFTNLAVIVDQANLRVLLFPMPN
Ga0306919_102479542	3300031879	Soil	INPSSLALNPQTGGIMTVNFAGQSVSIIDTVSNPFTTRRTYGLPGSAQFGIAIDQFTNQAVLADQANNRVLIFPVPN
Ga0310913_108101581	3300031945	Soil	NVGVNPTSLAINPQTGAILTSNSASNTISIVDTISNPFKTRQTLGIPGSSTFGVAIDQFTNLAVIVDQANMRVLLFPMPN
Ga0318530_103670061	3300031959	Soil	TGGGSSVNVGVNPTSLAINPQTGAILTSNTASNTVSIVDTISNPFQTRQTFGLPGSPTFGVAIDQFTNLAVIVDQANLRVLLFPMPN
Ga0307479_101784661	3300031962	Hardwood Forest Soil	TVSVVDTLSNPFRTRQTLGLPGSPLFGVAIDQFTNIAVVVDQANNRVFLYPMPN
Ga0307479_106961662	3300031962	Hardwood Forest Soil	SASVVDTVSNPKTVQTLGFPGSAQFGVAIDQFTNLAVIVDSANNRVLLFPMPN
Ga0307479_118360711	3300031962	Hardwood Forest Soil	ASIVDTTTGPKTVQTLGLPGSAQFGVAIDQFTNLAVIVDQANNRVLLFPMPN
Ga0306924_102248273	3300032076	Soil	GGGSSVNVGVNPTSLAINPQTGAILTSNTASNTVSIVDTISNPFQTRQTFGLPGSPTFGVAIDQFTNLAVIVDQANLRVLLFPMPN
Ga0307471_1004441201	3300032180	Hardwood Forest Soil	SLAINPQTGGIMTVNSTSQTISIIDTLSNPFKTRRTFGIGGSAQFGVAIDQFTNLAVIADQANNRVLIFPVPN
Ga0335080_106254182	3300032828	Soil	LALNPETGTIVTTNVAGKTTSVVDVTSARLKTVQTLGLPGSPQFGVAIDPFTNLAVIVDQANNRLFILPASK
Ga0310914_101905553	3300033289	Soil	NVGVNPTSLAINPQTGAILTSNTASNTVSIVDTISNPFQTRQTFGLPGSPTFGVAIDQFTNLAVIVDQANLRVLLFPMPN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041973

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences