Metagenome / Metatranscriptome Family F041927

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041927
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	56 residues
Representative Sequence	MIFPRAKNPGLWTAVGAGAGTAVGTALGNSPIGLALGAALGLALALLAARPGKRIY
Number of Associated Samples	115
Number of Associated Scaffolds	159

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.81 %
% of genes near scaffold ends (potentially truncated)	24.53 %
% of genes from short scaffolds (< 2000 bps)	76.73 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.164 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (12.579 % of family members)
Environment Ontology (ENVO)	Unclassified (29.560 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.346 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.05% β-sheet: 0.00% Coil/Unstructured: 55.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 159 Family Scaffolds
PF01145	Band_7	33.33
PF07853	DUF1648	22.01
PF00583	Acetyltransf_1	6.92
PF02230	Abhydrolase_2	5.66
PF13180	PDZ_2	5.03
PF13365	Trypsin_2	3.77
PF03869	Arc	1.26
PF12276	DUF3617	0.63
PF01135	PCMT	0.63
PF13240	zinc_ribbon_2	0.63
PF13458	Peripla_BP_6	0.63
PF00211	Guanylate_cyc	0.63
PF05362	Lon_C	0.63
PF13471	Transglut_core3	0.63
PF02518	HATPase_c	0.63

COG ID	Name	Functional Category	% Frequency in 159 Family Scaffolds
COG0466	ATP-dependent Lon protease, bacterial type	Posttranslational modification, protein turnover, chaperones [O]	0.63
COG1067	Predicted ATP-dependent protease	Posttranslational modification, protein turnover, chaperones [O]	0.63
COG1750	Predicted archaeal serine protease, S18 family	General function prediction only [R]	0.63
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.63
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.63
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.63
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	0.63
COG3480	Predicted secreted protein YlbL, contains PDZ domain	Signal transduction mechanisms [T]	0.63
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.16 %
Unclassified	root	N/A	13.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.16 %
Unclassified	root	N/A	13.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.16 %
Unclassified	root	N/A	13.84 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.33 %
Unclassified	root	N/A	13.84 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.52 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	13.21 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.77 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.52 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.52 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.84 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	8.18 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.52 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.52 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.89 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.26 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.26 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.84 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	8.18 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	2.52 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.52 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	1.89 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.26 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.26 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.84 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	8.18 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.52 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.52 %
unclassified Sinobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → unclassified Sinobacteraceae	1.89 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.26 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.26 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	13.84 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	8.18 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.52 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2.52 %
Sinobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → unclassified Sinobacteraceae → Sinobacteraceae bacterium	1.89 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.26 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.26 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918007\|ConsensusfromContig134097	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
2140918007\|ConsensusfromContig135239	Not Available	936	Open in IMG/M
3300001593\|JGI12635J15846_10072683	All Organisms → cellular organisms → Bacteria	2540	Open in IMG/M
3300002245\|JGIcombinedJ26739_101720952	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300003369\|JGI24140J50213_10239459	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005171\|Ga0066677_10729568	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300005184\|Ga0066671_10244137	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300005332\|Ga0066388_100068708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3832	Open in IMG/M
3300005332\|Ga0066388_100526425	All Organisms → cellular organisms → Bacteria	1815	Open in IMG/M
3300005332\|Ga0066388_108310484	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005434\|Ga0070709_10653882	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300005445\|Ga0070708_101730800	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005538\|Ga0070731_10041805	All Organisms → cellular organisms → Bacteria → Proteobacteria	3070	Open in IMG/M
3300005553\|Ga0066695_10536124	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300005556\|Ga0066707_10058261	All Organisms → cellular organisms → Bacteria	2264	Open in IMG/M
3300005569\|Ga0066705_10218849	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300005764\|Ga0066903_100759767	All Organisms → cellular organisms → Bacteria → Proteobacteria	1724	Open in IMG/M
3300005764\|Ga0066903_101066178	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300005764\|Ga0066903_105731685	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300005764\|Ga0066903_107809869	All Organisms → cellular organisms → Bacteria → Proteobacteria	550	Open in IMG/M
3300005938\|Ga0066795_10068728	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300005952\|Ga0080026_10003809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3542	Open in IMG/M
3300005952\|Ga0080026_10162934	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300005993\|Ga0080027_10249141	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300005993\|Ga0080027_10343587	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300005994\|Ga0066789_10000421	All Organisms → cellular organisms → Bacteria → Proteobacteria	16650	Open in IMG/M
3300005994\|Ga0066789_10191751	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300005994\|Ga0066789_10480551	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005995\|Ga0066790_10151708	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300006057\|Ga0075026_100537750	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300006175\|Ga0070712_100160263	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300006642\|Ga0075521_10438506	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300009029\|Ga0066793_10028595	All Organisms → cellular organisms → Bacteria → Proteobacteria	3087	Open in IMG/M
3300009137\|Ga0066709_103877166	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	543	Open in IMG/M
3300010046\|Ga0126384_10045834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2987	Open in IMG/M
3300010358\|Ga0126370_11222490	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300010360\|Ga0126372_10069349	All Organisms → cellular organisms → Bacteria	2499	Open in IMG/M
3300010360\|Ga0126372_12356019	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300010360\|Ga0126372_12998089	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300010361\|Ga0126378_11890297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → unclassified Sinobacteraceae → Sinobacteraceae bacterium	679	Open in IMG/M
3300010361\|Ga0126378_12382193	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300010366\|Ga0126379_10110873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2466	Open in IMG/M
3300010366\|Ga0126379_11899118	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300010376\|Ga0126381_101421539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1003	Open in IMG/M
3300010398\|Ga0126383_10613386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → unclassified Sinobacteraceae → Sinobacteraceae bacterium	1160	Open in IMG/M
3300010398\|Ga0126383_12646610	Not Available	585	Open in IMG/M
3300010856\|Ga0126358_1015014	Not Available	1368	Open in IMG/M
3300010861\|Ga0126349_1133645	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300010880\|Ga0126350_11619689	All Organisms → cellular organisms → Bacteria	1830	Open in IMG/M
3300011271\|Ga0137393_10556886	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300011444\|Ga0137463_1278986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	617	Open in IMG/M
3300012096\|Ga0137389_11215809	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300012198\|Ga0137364_10183341	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300012205\|Ga0137362_10200441	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300012206\|Ga0137380_11364505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	594	Open in IMG/M
3300012208\|Ga0137376_10772007	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	828	Open in IMG/M
3300012209\|Ga0137379_10318345	All Organisms → cellular organisms → Bacteria → Proteobacteria	1466	Open in IMG/M
3300012209\|Ga0137379_11016591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	734	Open in IMG/M
3300012210\|Ga0137378_10002834	All Organisms → cellular organisms → Bacteria → Proteobacteria	14927	Open in IMG/M
3300012357\|Ga0137384_10446039	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300012917\|Ga0137395_10879274	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	649	Open in IMG/M
3300012923\|Ga0137359_10071606	All Organisms → cellular organisms → Bacteria → Proteobacteria	3030	Open in IMG/M
3300012923\|Ga0137359_10532034	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300012948\|Ga0126375_10859844	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	724	Open in IMG/M
3300012948\|Ga0126375_11155910	Not Available	641	Open in IMG/M
3300012971\|Ga0126369_10737418	Not Available	1064	Open in IMG/M
3300012971\|Ga0126369_11103690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	882	Open in IMG/M
3300012971\|Ga0126369_11945653	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300015087\|Ga0167637_1000717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4818	Open in IMG/M
3300015090\|Ga0167634_1000191	All Organisms → cellular organisms → Bacteria → Proteobacteria	6133	Open in IMG/M
3300015193\|Ga0167668_1000991	All Organisms → cellular organisms → Bacteria → Proteobacteria	5722	Open in IMG/M
3300015193\|Ga0167668_1060663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	773	Open in IMG/M
3300015193\|Ga0167668_1081797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	625	Open in IMG/M
3300015371\|Ga0132258_10002892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	32190	Open in IMG/M
3300015371\|Ga0132258_10275596	All Organisms → cellular organisms → Bacteria	4125	Open in IMG/M
3300015371\|Ga0132258_10565783	All Organisms → cellular organisms → Bacteria → Proteobacteria	2850	Open in IMG/M
3300015371\|Ga0132258_10955648	All Organisms → cellular organisms → Bacteria	2164	Open in IMG/M
3300015371\|Ga0132258_11907345	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300015371\|Ga0132258_12825771	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300015374\|Ga0132255_104419235	Not Available	596	Open in IMG/M
3300016404\|Ga0182037_10084440	All Organisms → cellular organisms → Bacteria	2240	Open in IMG/M
3300017959\|Ga0187779_10021633	All Organisms → cellular organisms → Bacteria → Proteobacteria	3667	Open in IMG/M
3300017959\|Ga0187779_10104114	All Organisms → cellular organisms → Bacteria	1713	Open in IMG/M
3300017959\|Ga0187779_10561016	All Organisms → cellular organisms → Bacteria	761	Open in IMG/M
3300017961\|Ga0187778_10000794	All Organisms → cellular organisms → Bacteria	22544	Open in IMG/M
3300017974\|Ga0187777_10177554	Not Available	1429	Open in IMG/M
3300018032\|Ga0187788_10334984	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300018058\|Ga0187766_11468690	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300018060\|Ga0187765_10022417	All Organisms → cellular organisms → Bacteria → Proteobacteria	3024	Open in IMG/M
3300018064\|Ga0187773_11150296	Not Available	518	Open in IMG/M
3300019879\|Ga0193723_1062984	Not Available	1078	Open in IMG/M
3300019888\|Ga0193751_1002316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	11609	Open in IMG/M
3300019888\|Ga0193751_1181847	Not Available	723	Open in IMG/M
3300020006\|Ga0193735_1066787	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300021080\|Ga0210382_10163424	Not Available	958	Open in IMG/M
3300021344\|Ga0193719_10032607	All Organisms → cellular organisms → Bacteria	2249	Open in IMG/M
3300021413\|Ga0193750_1012372	All Organisms → cellular organisms → Bacteria → Proteobacteria	2136	Open in IMG/M
3300021478\|Ga0210402_10809965	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300021478\|Ga0210402_11254669	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300021560\|Ga0126371_10011554	All Organisms → cellular organisms → Bacteria → Proteobacteria	7982	Open in IMG/M
3300021560\|Ga0126371_10960196	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	997	Open in IMG/M
3300025878\|Ga0209584_10292782	All Organisms → cellular organisms → Bacteria → Acidobacteria	625	Open in IMG/M
3300025915\|Ga0207693_11256294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	556	Open in IMG/M
3300026217\|Ga0209871_1013711	Not Available	1509	Open in IMG/M
3300026271\|Ga0209880_1081796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	670	Open in IMG/M
3300026291\|Ga0209890_10006803	All Organisms → cellular organisms → Bacteria → Proteobacteria	4807	Open in IMG/M
3300026291\|Ga0209890_10017257	All Organisms → cellular organisms → Bacteria	2850	Open in IMG/M
3300026291\|Ga0209890_10066150	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1303	Open in IMG/M
3300026294\|Ga0209839_10005189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6004	Open in IMG/M
3300026322\|Ga0209687_1097314	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300026530\|Ga0209807_1255524	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300027521\|Ga0209524_1007310	All Organisms → cellular organisms → Bacteria	2146	Open in IMG/M
3300027645\|Ga0209117_1042918	Not Available	1365	Open in IMG/M
3300027674\|Ga0209118_1001139	All Organisms → cellular organisms → Bacteria → Proteobacteria	12928	Open in IMG/M
3300027678\|Ga0209011_1133218	All Organisms → cellular organisms → Bacteria → Proteobacteria	706	Open in IMG/M
3300027842\|Ga0209580_10246538	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300027874\|Ga0209465_10234865	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300027902\|Ga0209048_10001541	All Organisms → cellular organisms → Bacteria → Proteobacteria	23547	Open in IMG/M
3300028047\|Ga0209526_10011693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6063	Open in IMG/M
3300028870\|Ga0302254_10171326	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300030114\|Ga0311333_10322316	Not Available	1234	Open in IMG/M
3300030114\|Ga0311333_10796620	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300031047\|Ga0073995_12065959	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300031543\|Ga0318516_10168370	Not Available	1260	Open in IMG/M
3300031544\|Ga0318534_10368032	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300031720\|Ga0307469_10292305	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300031720\|Ga0307469_11106493	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300031740\|Ga0307468_101781608	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300031751\|Ga0318494_10724700	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300031819\|Ga0318568_10103246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1709	Open in IMG/M
3300031820\|Ga0307473_10062692	All Organisms → cellular organisms → Bacteria	1825	Open in IMG/M
3300031820\|Ga0307473_10133601	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300031912\|Ga0306921_12397871	Not Available	550	Open in IMG/M
3300031954\|Ga0306926_10913005	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1051	Open in IMG/M
3300032008\|Ga0318562_10132755	All Organisms → cellular organisms → Bacteria → Proteobacteria	1429	Open in IMG/M
3300032039\|Ga0318559_10003561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5032	Open in IMG/M
3300032054\|Ga0318570_10329042	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	695	Open in IMG/M
3300032067\|Ga0318524_10474204	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300032076\|Ga0306924_12559957	Not Available	510	Open in IMG/M
3300032091\|Ga0318577_10515911	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	569	Open in IMG/M
3300032180\|Ga0307471_100298545	All Organisms → cellular organisms → Bacteria → Proteobacteria	1697	Open in IMG/M
3300032180\|Ga0307471_100614645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1247	Open in IMG/M
3300032205\|Ga0307472_100356442	Not Available	1203	Open in IMG/M
3300032205\|Ga0307472_100435515	Not Available	1109	Open in IMG/M
3300032205\|Ga0307472_100558553	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300032205\|Ga0307472_102141172	Not Available	563	Open in IMG/M
3300032261\|Ga0306920_103662238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	565	Open in IMG/M
3300032770\|Ga0335085_10566748	All Organisms → cellular organisms → Bacteria → Proteobacteria	1284	Open in IMG/M
3300032782\|Ga0335082_10287363	All Organisms → cellular organisms → Bacteria	1519	Open in IMG/M
3300032954\|Ga0335083_10311864	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300032955\|Ga0335076_10173222	All Organisms → cellular organisms → Bacteria	2068	Open in IMG/M
3300033289\|Ga0310914_11566029	Not Available	562	Open in IMG/M
3300033433\|Ga0326726_11420105	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300033803\|Ga0314862_0034207	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300033803\|Ga0314862_0034940	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300033805\|Ga0314864_0033481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1126	Open in IMG/M
3300033805\|Ga0314864_0094444	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300034129\|Ga0370493_0064552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → unclassified Sinobacteraceae → Sinobacteraceae bacterium	1144	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.60%
Host-Associated	Host-Associated	4.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.08%
Plants	Host-Associated → Plants	4.40%
Aquatic	Environmental → Aquatic	2.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.40%
Peat	Environmental → Terrestrial → Peat	2.52%
Freshwater	Environmental → Aquatic → Freshwater	1.26%
Sediment	Environmental → Aquatic → Sediment	1.26%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	21.38%
Loam	Environmental → Terrestrial → Soil → Loam	12.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.40%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.26%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.63%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.32%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	10.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.40%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.52%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.26%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.63%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.63%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.63%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.58%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.18%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	6.29%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.40%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.77%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	3.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.14%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.52%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.52%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.89%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	1.89%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.89%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.89%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.26%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.63%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.63%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.63%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.63%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.63%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010856	Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015087	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6A, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015090	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G5A, Northern proglacial tributary margin, adjacent to top of river)	Environmental	Open in IMG/M
3300015193	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb6, proglacial stream)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031047	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M
3300034129	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A_all_C_03381140	2140918007	Soil	MIFLRAKNPGLWTAVGAGAGTAVGTALGNSPIGLALGAALGLALALLAGRPGKRIY
A_all_C_00547970	2140918007	Soil	MIFLRARNPGLWTAVGAGAGTAVGTALGNSPIGLALGAALLAFVALVGYVS
JGI12635J15846_100726832	3300001593	Forest Soil	MIFLRAKNPGLWTAVGAGAGTAVGTALGNSPLGLALGAALGLALALLAGRPGKRIY*
JGIcombinedJ26739_1017209522	3300002245	Forest Soil	MIFPRAKNPGLWTAVGAGAGTALGTALGNSPIGLALGAALGLALALLAGRPSKRIY*
JGI24140J50213_102394591	3300003369	Arctic Peat Soil	MIFVRARNPGLWTAVGAGAGTAVGTALGNSPIGLALGAALGLAFAVFASRPGKRTF*
Ga0066677_107295682	3300005171	Soil	MIFPRAKNPGLWTAVGAGAGTAVGTALGNSPIGLALGAALGLALALLAARPGKRIY*
Ga0066671_102441372	3300005184	Soil	MIFPRARNPGLWTTVGAGAGTVLGTALGNSPVGLALGAALGLALAVLVARSGKRTF*
Ga0066388_1000687082	3300005332	Tropical Forest Soil	MIAVRARHTGAWTAIGAAIGTAVGTALGNSPIGLVLGAGMGVALAVLVARPLKRSG*
Ga0066388_1005264252	3300005332	Tropical Forest Soil	MIIVRAKHPGLWTAVGAGVGTAIGTALGNSPVGLALGAVLGILWAVLSARPGRRGA*
Ga0066388_1083104841	3300005332	Tropical Forest Soil	MIVVRARHPGAWTAIGAAIGTAIGTALGNSPIGLALGAGMGVALAMLAARPAKRSS*
Ga0070709_106538822	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MIFPRAKNPGLWTAVGAGAGTALGTALGNSPIGLALGAVLGLALAVLAGRPGKRSY*
Ga0070708_1017308002	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MIFLRAKNPGLWTAVGAGAGTAVGTVLGNSPIGLALGAALGLALAVLAGRPGKRSY*
Ga0070731_100418053	3300005538	Surface Soil	MVLRARNPGMWSAVGAGIGTAAGTAIGNSPVGLALGAALGLVLAMYVARPKKRVPTSPRNA*
Ga0066695_105361242	3300005553	Soil	MVTRARNPGLWTAVGAGAGTALGTALGNTPVGLALGAALGIAWALFAARERKGSCR*
Ga0066707_100582611	3300005556	Soil	MIMRARNPGLWTALGASVGTAVGTALGNSPVGLALGAALGVVVAVFAARPGKRSC*
Ga0066705_102188493	3300005569	Soil	PHLRKERAMIMRARNPGLWTALGASVGTAVGTALGNSPVGLALGAALGVVVAVFAARPGKRSC*
Ga0066903_1007597672	3300005764	Tropical Forest Soil	MIAVRAKHTGAWTVIGAAIGTAVGTALGNSPIGLALGAGMGVALAMLVARPLKRDG*
Ga0066903_1010661782	3300005764	Tropical Forest Soil	MIFVRARHPGLWTAVGAGAGTAVGTALGNSPIGLALGAAVGVLCAVLFARPSKRGC*
Ga0066903_1057316852	3300005764	Tropical Forest Soil	IVRAKHPGLWTAVGAGVGTAIGTALGNSPVGLALGAALGVLWAVLSARPGRRGA*
Ga0066903_1078098691	3300005764	Tropical Forest Soil	MINVRARHPGAWTAFGAAVGTAVGTALGNSPIGLAAGAALGIVLAMLSARPARRSG*
Ga0066795_100687281	3300005938	Soil	RNPGIWTAVGASAGTALGTAFGNSPVGLALGAALGLALAVFAGRPGKRTF*
Ga0080026_100038092	3300005952	Permafrost Soil	MIFLRARNPGLWTAAGAGAGTAIGTALGNSPIGLALGAALGLVLAVFAGRPGKRTT*
Ga0080026_101629342	3300005952	Permafrost Soil	MIYLRARNPGLWTAAGAGAGTALGTVLGNSPIGLALGAALGLALAIFAARPGKRTY*
Ga0080027_102491411	3300005993	Prmafrost Soil	MVTRARNPGMWTAVGAGAGIALGTAVGNTPVGLALGAALGIGWALF
Ga0080027_103435872	3300005993	Prmafrost Soil	MIYLRARNPGLWTAAGAGAGTALGTVLGNSPIGLALGAALGLALAIFAARPGKRIY*
Ga0066789_1000042113	3300005994	Soil	MVTRARNPGLWTAVGAGAGTAVGTALGNTPIGLALGAALGIAWALYAARARR*
Ga0066789_101917512	3300005994	Soil	MIFLRTKNPGLWTAVGAGAGTAVGTALGNSPVGLALGAALGLALAVFAGRPGKRTF*
Ga0066789_104805511	3300005994	Soil	MIFLRARNPGLWTAAGAGAGTAIGTALGNSPIGLALGAALGLALAVF
Ga0066790_101517083	3300005995	Soil	DFLTRETTMIFLRARNPGLWTAAGAGAGTAIGTALGNSPIGLALGAALGLVLAVFAGRPGKRTT*
Ga0075026_1005377502	3300006057	Watersheds	MVMRARNPGLWTAIGAALGIVLGTMLGNTPIGLALGAVLGVAWAVFVARPRKPSC*
Ga0070712_1001602631	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	IFPRAKNPGLWTAVGAGAGTALGTALGNSPIGLALGAVLGLALAVLAGRPGKRSY*
Ga0075521_104385061	3300006642	Arctic Peat Soil	MVMRARNPGMWTAIGAGVGIVLGTALGNTPIGLALGAVMGVAWAVFVARPRKPSC*
Ga0066793_100285952	3300009029	Prmafrost Soil	MIFPRARNPGIWTAVGASAGTALGTAFGNSPVGLALGAALGLALAVFAGRPGKRTF*
Ga0066709_1038771661	3300009137	Grasslands Soil	EELLTMVTRARNPGLWTAVGAGAGTALGTALGNTPVGLALGAALGIAWALFAARERKGSCR*
Ga0126384_100458342	3300010046	Tropical Forest Soil	MIAVRAKHTGAWTAIGAAIGTAVGTAFGNSPIGLALGACMGVALAMLVARPLKRDG*
Ga0126370_112224902	3300010358	Tropical Forest Soil	MIAVRAKHTGAWTVIGAAIGTAVGTALGNSPIGLALGAGMGVAFAMLVARPLKRDG*
Ga0126372_100693494	3300010360	Tropical Forest Soil	MIIVRAKHPGLWTAVGAGAGTAIGTALGNSPVGLALGAVLGILWAVLSARPGRRGA*
Ga0126372_123560192	3300010360	Tropical Forest Soil	MIIVRAKHPGLWTAVGAGVGTAIGTALGNSPVGLALGAALGVLWAVLSARPGRRGA*
Ga0126372_129980892	3300010360	Tropical Forest Soil	MIFVRARRPGAWAAIGAAIGTAVGTALGNSPIGLALGAGMGVALSMLAARPAKRSG*
Ga0126378_118902972	3300010361	Tropical Forest Soil	MIFVRARHPGLWTALGAGAGTAVGTALGNSPIGLALGAALGILCAVLTARPSKRGC*
Ga0126378_123821932	3300010361	Tropical Forest Soil	MIVVRARHPGAWTAVGAAIGTAIGTALGNSPIGLALGAGMGVALAMLAARPAKRSG*
Ga0126378_134070602	3300010361	Tropical Forest Soil	ARSDDSREGIGMIVVRARHTGAWTSLGAAVGTAVGTALGNSPIGLAAGAALGVVMAMLAARPPRRPG*
Ga0126379_101108733	3300010366	Tropical Forest Soil	MIAVRAKHTGAWTAIGAAIGTAVGTALGNSPIGLALGAGMGVAFAMLVARPLKRDG*
Ga0126379_118991182	3300010366	Tropical Forest Soil	MIFVRARHPGLWTAVGAGAGTAVGTALGNSPIGLALGAAVGILCAVLTARPSKRGC*
Ga0126381_1014215391	3300010376	Tropical Forest Soil	PTGNQHRHALHLTEDLMIAVRAKHTGAWTVIGAAIGTAVGTALGNSPIGLALGAGMGVALAMLVARPLKRDG*
Ga0126383_106133862	3300010398	Tropical Forest Soil	MIFGRARHPGLWTALGAGAGTAVGTALGNSPIGLALGAALGILCAVLTARPSKRGC*
Ga0126383_126466102	3300010398	Tropical Forest Soil	ERSAAGDQHRNSVSVTRDRAKENAMIVVRARHPGAWTAIGAAIGTAIGTALGNSPVGLALGAGMGVALAMLAARPAKRSG*
Ga0126358_10150142	3300010856	Boreal Forest Soil	MIFPRAKNPGLWTAVGAGTGTAVGTALGNSPIGLALGAALGLALALFAGRPGKRIY*
Ga0126349_11336452	3300010861	Boreal Forest Soil	MIFLRARNPGLWTAVGAGAGTAVGTALGNSPIGLALGAALGLALALLAGRPGKRIY*
Ga0126350_116196893	3300010880	Boreal Forest Soil	MIFPRAKNPGLWTAVGAGAGTAIGTVLGNSPIGLALGAALGLALALLTGRPGKRIC*
Ga0137393_105568862	3300011271	Vadose Zone Soil	MIFLRAKNPGLWTAVGAGAGTAVGTALGNSPIGLALGAALGLALAVLAGRLGKRSY*
Ga0137463_12789861	3300011444	Soil	MIIVRARHTGAWTSVGAVVGTAIGTALGNSPIGLAAGAALGVVLAMLAARPPRRP
Ga0137389_112158092	3300012096	Vadose Zone Soil	MMIFLRAKNPGLWTAVGAGAGTAVGTALGNSPVGLALGAALGLALAVFAARPGKRIF*
Ga0137364_101833411	3300012198	Vadose Zone Soil	MIFPRAKSPGLWTAVGAGAGTAVGTALGNSPIGLALGAALGLALALLAARPGKRIY*
Ga0137362_102004411	3300012205	Vadose Zone Soil	NERENAMLLLRARNPGLWTTVGAGAGTAVGTALGNSPIGLALGAALGILWAVFAGRQSKRRG*
Ga0137380_113645051	3300012206	Vadose Zone Soil	RNPGLWTALGAGVGTAVGTALGNSPVGLALGAGLGVLVAMLAARPGKRSC*
Ga0137376_107720072	3300012208	Vadose Zone Soil	MIFPRARNPGLWTAVGASAGTAVGTALGNSPVGLALGAALGLALAVFVSRPGKRNF*
Ga0137379_103183451	3300012209	Vadose Zone Soil	MIILRARNPGLWTAIGASAGTAIGTALGNSPIGLAVGAGLGVLFAVFAGRPGKRGR
Ga0137379_110165911	3300012209	Vadose Zone Soil	GLWTAIGASVGTAIGTALGNSPIGLAVGAGLGVLFAVLAGRPGKRGC*
Ga0137378_1000283412	3300012210	Vadose Zone Soil	MIILRARHPGLWTAIGASVGTAIGTALGNSPIGLAVGAGLGVLFAVLAGRPGKRGC*
Ga0137384_104460391	3300012357	Vadose Zone Soil	PGLWTAVGAGAGTALGTALGNTPVGLALGAALGIAWALFAARERKGSCR*
Ga0137395_108792742	3300012917	Vadose Zone Soil	MIFLRARNPGLWTAVGAGAGTAVGTALGNSPVGLALGAALGLALAVFAGRPGKRTS*
Ga0137359_100716062	3300012923	Vadose Zone Soil	MIFPRAKNPGLWTAAGAGAGTAVGTALGNSPIGLALGAALGLALALLAGRPGKRSY*
Ga0137359_105320343	3300012923	Vadose Zone Soil	MIFPRARNPGLWTAVGASAGTAVGTALGNSPVGLALGAALGLALAVFVSRPGNRNF*
Ga0126375_108598442	3300012948	Tropical Forest Soil	MIAVRARHTGAWIAFGAAIGTAVGTALGNSPVGLALGAGLGVALAALVARPFKRSG*
Ga0126375_111559102	3300012948	Tropical Forest Soil	VTRDRAKENAMIVVRARHPGAWTAIGAAIGTAIGTALGNSPVGLALGAGMGVALAMLAARPAKRSG*
Ga0126369_107374182	3300012971	Tropical Forest Soil	MIAVRAKHTGAWTAIGAAIGTAVGTALGNSPIGLALGAGMGVALAMLVARPLKRDG*
Ga0126369_111036901	3300012971	Tropical Forest Soil	GDKHWHALHLTEDLMIAVRAKHTGAWTVIGAAIGTAVGTALGNSPIGLALGAGMGVALAMLVARPLKRDG*
Ga0126369_119456532	3300012971	Tropical Forest Soil	MIFVRAKHPGLWTAVGAGVGTAIGTALGNSPVGLALGAALGVLWAVLSARPGRRGA*
Ga0167637_10007174	3300015087	Glacier Forefield Soil	MMIFLRARNPGLWTAAGAGAGTAIGTALGNSPIGLALGAALGLVLAVFAGRPGKRTT*
Ga0167634_10001916	3300015090	Glacier Forefield Soil	MIFPRARNPGIWTAVGASAGTALGTAFGNSPVGLALGAALGLALAVFAGRPGKRIY*
Ga0167668_10009912	3300015193	Glacier Forefield Soil	MIFPRAKNPGLWTAVGAGAGTAVGTALGNSPIGLALGAALGLALALLAGRPGKRIY*
Ga0167668_10606632	3300015193	Glacier Forefield Soil	MMIFLRTKNPGLWTAVGAGAGTAVGTVLGNSPIGLALGAALGLALALFAGRPGKRIC*
Ga0167668_10817972	3300015193	Glacier Forefield Soil	MIFLRARNPGLWTAVGAGAGTAVGTAFGNSPVGLALGAALGLALAVFAGRPGKRTF*
Ga0132258_1000289225	3300015371	Arabidopsis Rhizosphere	MVTRARNPGIWTAVGASAGTAVGTALGNSPVGLALGAALGLAWALFAARGRKQTCLIAPSSGE*
Ga0132258_102755963	3300015371	Arabidopsis Rhizosphere	MWTVVGASAGTALGTALGNTPVGLAIGAVLGIAWALFWARSRKETC*
Ga0132258_105657834	3300015371	Arabidopsis Rhizosphere	MWTAVGAGAGIALGTALGNTPVGLALGAALGIAWALFNARARKQRC*
Ga0132258_109556485	3300015371	Arabidopsis Rhizosphere	MVTRARKPGTWTAVGAGAGMALGTALGNTPVGLVLGAALGIAWALFAARERKGSCR*
Ga0132258_119073451	3300015371	Arabidopsis Rhizosphere	MWTAVGAGAGIALGTALGNTPVGLAIGAVLGIAWALFSARNRKETC*
Ga0132258_128257712	3300015371	Arabidopsis Rhizosphere	MVTRARKPGIWTAVGAGAGMALGTALGNSPVGLALGAALGLAWALFAARARKQAC*
Ga0132255_1044192352	3300015374	Arabidopsis Rhizosphere	MWTAVGAGAGTALGTALGNTPVGLAIGAVLGIAWALFSARNRKETC*
Ga0182037_100844403	3300016404	Soil	MIVVRARHPGAWTAIGAAIGTAIGTALGNSPIGLALGAGMGVALAML
Ga0187779_100216333	3300017959	Tropical Peatland	MINVRARNPGLWTALGAGAGTAVGTALGNSPIGLVLGAALGILCAVITSRPGKRSC
Ga0187779_101041141	3300017959	Tropical Peatland	MIIVRAKHPGLWTVLGAGAGTAIGTAFGNSPVGLALGAVLGIVLAVLSARPGRRGA
Ga0187779_105610162	3300017959	Tropical Peatland	MIVVRARHTGAWTLLGAAIGTAVGTALGNSPIGLALGAGMGIALAVLVARPLKRGG
Ga0187778_1000079415	3300017961	Tropical Peatland	MIIVRAKHPGLWTAVGAGAGTAIGTALGNSPIGLALGAALGILWAVLSARPGRRGA
Ga0187777_101775543	3300017974	Tropical Peatland	MIFVRAKHPGLWTVLGAGAGTAIGTAFGNSPVGLALGAVLGIVLAVLSARPGRRGA
Ga0187788_103349843	3300018032	Tropical Peatland	MIIVRARHTGAWASVGAVVGTAVGTALGNSPIGLAAGAALGVVMAMLAARPPRRPG
Ga0187766_114686902	3300018058	Tropical Peatland	VIIVRARHPGVWTALGAGAGTAIGTALGNSPIGLLLGALLGILWSMFSARPGKRSR
Ga0187765_100224176	3300018060	Tropical Peatland	MIAVRARHTGAWTLLGAAIGTAVGTALGNSPIGLALGAGMGIALAVLVARPLKRGG
Ga0187773_111502961	3300018064	Tropical Peatland	MIIVRARHTGAWTSVGAVVGTAVGTALGNSPIGLAAGAALGVVLAMLAARPPRRPG
Ga0193723_10629842	3300019879	Soil	MIFPRARNPGLWTAVGASAGTAVGTAFGNSPVGLALGAALGLALAVFAGRPG
Ga0193751_10023163	3300019888	Soil	MIMRARKPGLWTALGASVGTAVGTALGNSPVGLALGAALGVVVAMFAARPGKRGC
Ga0193751_11818472	3300019888	Soil	MIFLRAKNPGLWTAVGAGAGTAVGTALGNSPIGLALGAALGLALAVLAGRPGKRSY
Ga0193735_10667872	3300020006	Soil	MIFPRARNPGLWTAVGASAGTAIGTAFGNSPVGLALGAALGLALAVFAGRPGKRIF
Ga0210382_101634242	3300021080	Groundwater Sediment	MIFPRARNPGIWTAVGASAGTALGTALGNSPVGLALGAALGLALAVFAGRPGKRTF
Ga0193719_100326073	3300021344	Soil	MIFPRARNPGLWTAVGASAGTAVGTALGNSPVGLALGAALGLALAVFAGRPGKRNF
Ga0193750_10123725	3300021413	Soil	MIFPRAKNPGLWTAVGAGAGTAVGTALGNSPIGLALGAALGLALALLAGRPGKRIY
Ga0210402_108099651	3300021478	Soil	NAMLLLRARNPGLWTTVGAGAGTAVGTALGNSPIGLALGAALGILLSVFAGKRAKRRN
Ga0210402_112546692	3300021478	Soil	MIFPRAKNPGLWTAVGAGAGTAVGTALGNSPIGLALGAALGLALAVLAGRPGKRSY
Ga0126371_1001155410	3300021560	Tropical Forest Soil	MIFVRARHPGLWTALGAGAGTAVGTALGNSPIGLALGAALGILCAVLTARPSKRGC
Ga0126371_109601962	3300021560	Tropical Forest Soil	MIAVRAKHTGAWTVIGAAIGTAVGTALGNSPIGLALGAGMGVALAMLVARPLKRDG
Ga0209584_102927822	3300025878	Arctic Peat Soil	MVMRARNPGMWTAIGAGVGIVLGTALGNTPIGLALGAVMGVAWAVFVARPRKPSC
Ga0207693_112562942	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	IFPRAKNPGLWTAVGAGAGTALGTALGNSPIGLALGAVLGLALAVLAGRPGKRSY
Ga0209871_10137112	3300026217	Permafrost Soil	MIFLRARNPGLWTAAGAGAGTAIGTALGNSPIGLALGAALGLVLAVFAGRPGKRTT
Ga0209880_10817961	3300026271	Soil	RARNPGIWTAVGASAGTALGTAFGNSPVGLALGAALGLALAVFAGRPGKRTF
Ga0209890_100068034	3300026291	Soil	MVTRARNPGLWTAVGAGAGTAVGTALGNTPIGLALGAALGIAWALYAARARR
Ga0209890_100172571	3300026291	Soil	MIYLRARNPGLWTAAGAGAGTALGTVLGNSPIGLALGAALGLALAIFAARPGKRTY
Ga0209890_100661502	3300026291	Soil	MVTRARNPGMWTAVGAGAGIALGTAVGNTPVGLALGAALGIGWALFAARMRKRNN
Ga0209839_100051896	3300026294	Soil	MIYLRARNPGLWTAAGAGAGTALGTVLGNSPIGLALGAALGLALAIFAARPGKRIY
Ga0209687_10973142	3300026322	Soil	MIFPRAKNPGLWTAVGAGAGTAVGTALGNSPIGLALGAALGLALALLAARPGKRIY
Ga0209807_12555241	3300026530	Soil	PHLRKERAMIMRARNPGLWTALGASVGTAVGTALGNSPVGLALGAALGVVVAVFAARPGKRSC
Ga0209524_10073101	3300027521	Forest Soil	MIFPRAKNPGLWTAVGAGAGTALGTALGNSPIGLALGAALGLALALLAGRP
Ga0209117_10429182	3300027645	Forest Soil	MIFPRARNPGIWTAVGASAGTAIGTAFGNSPVGLALGAALGLALAVFAGRPGKRTC
Ga0209118_10011396	3300027674	Forest Soil	MIFLRAKNPGLWTAVGAGAGTAVGTALGNSPLGLALGAALGLALALLAGRPGKRIY
Ga0209011_11332182	3300027678	Forest Soil	MLFPRARNPGIWTAVGASAGTAVGTALGNSPVGLALGAALGLALAVFAGRSGKRTF
Ga0209580_102465381	3300027842	Surface Soil	MLIVRAKNVRVWTAVGAVLGTAIGTALGNSPLGLAVGAALGLAVALLAGQPGKRTG
Ga0209465_102348651	3300027874	Tropical Forest Soil	MIFVRARHPGLWTAVGAGAGTAVGTALGNSPIGLALGAAVGILCAVLFARPS
Ga0209048_1000154118	3300027902	Freshwater Lake Sediment	MVTRARSPGMWTAIGAGVGTALGTALGNSPVGLALGAALGIAWALFAARPRKPSC
Ga0209526_100116934	3300028047	Forest Soil	MIFPRAKNPGLWTAVGAGAGTALGTALGNSPIGLALGAALGLALALLAGRPSKRIY
Ga0302254_101713262	3300028870	Fen	MVMRARNPGMWTAIGAGVGIVLGTALGNTPVGLAVGAVLGVAWALFSARPRKSSY
Ga0311333_103223161	3300030114	Fen	MVTRARKPGMWTAVGAGAGIALGTALGNTPVGLAVGAALGIAWALFNARARKQRC
Ga0311333_107966202	3300030114	Fen	MVMRARNPGMWTAIGAGVGIVLGTALGNTPVGLAVGAMMGVAWALFSARPRKSSY
Ga0073995_120659592	3300031047	Soil	MIFPRAKNPGLWTAVGAGAGTAVGTALGNSPVGLALGAALGLALAVFAGR
Ga0318516_101683702	3300031543	Soil	MIVVRARHPGAWTAIGAAIGTAIGTALGNSPIGLALGAGMGVALAMLAARPAKRSS
Ga0318534_103680322	3300031544	Soil	MIVVRARNPGAWIAVGAVIGTAIGTALGNSPVGLALGAAMGVALAMFAARPAKRSG
Ga0307469_102923052	3300031720	Hardwood Forest Soil	MIFVRARRPGAWAAIGAAIGTAIGTALGNSPIGLALGAGMGVALSMLVARPAKRSG
Ga0307469_111064931	3300031720	Hardwood Forest Soil	MIFPRAKNPGLWTAVGAGAGTAVGTVLGNSPIGLALGAALGLALAVLAGRPSKRSY
Ga0307468_1017816082	3300031740	Hardwood Forest Soil	MIFPRARNPGLWTAVGASAGTAVGTAFGNSPVGLALGAALGLALAVFAGRPGKRNF
Ga0318494_107247002	3300031751	Soil	MIVVRARHPGAWTAIGAAIGTAIGTALGNSPIGLALGAGMGVALAM
Ga0318568_101032464	3300031819	Soil	MIVVRARHPGAWTAIGAAIGTAIGTALGAGMGVALAMLAARPAKRSS
Ga0307473_100626924	3300031820	Hardwood Forest Soil	MIFVRARRPGVWAAIGAAIGTAVGTALGNSPVGLALGAAMGVALAMLTARPAKPDD
Ga0307473_101336012	3300031820	Hardwood Forest Soil	MIIVRARHTGTWASVGAVVGTAVGTALGNSPIGLAAGAALGVVLAMLAARPPRR
Ga0306921_123978712	3300031912	Soil	LRLKEERAMIFVRARHPGLWTAVGAGAGTAVGTVLGNSPIGLALGAAVGILCAVLTARPSKRGC
Ga0306926_109130052	3300031954	Soil	MIFVRVRHPGLCTAVGAGAGTAVGTALGNSPIGLVLGAALGILCAVLIARPSKRGC
Ga0318562_101327552	3300032008	Soil	MIAVRARHTGAWTVFGAAIGTAVGTALGNSPIGLALGAGMGVALAMLVARPLKRDG
Ga0318559_100035611	3300032039	Soil	ENAMIVVRARHPGAWTAIGAAIGTAIGTALGNSPIGLALGAGMGVALAMLAARPAKRSS
Ga0318570_103290422	3300032054	Soil	SISDVRDRAEENAMIVVRARHPGAWTAIGAAIGTAIGTALGNSPIGLALGAGMGVALAMLAARPAKRSS
Ga0318524_104742041	3300032067	Soil	MIIVRAKHPGLWTAVGAGVGTAIGTALGNSPVGLALGAALGILWAVF
Ga0306924_125599571	3300032076	Soil	RDVVHRLRLKEERAMIFVRARHPGLWTAVGAGAGTAVGTVLGNSPIGLALGAAVGILCAVLTARPSKRGC
Ga0318577_105159111	3300032091	Soil	ARHPGAWTAIGAAIGTAIGTALGNSPIGLALGAGMGVALAMLAARPAKRSS
Ga0307471_1002985454	3300032180	Hardwood Forest Soil	MLILRARNPGLWTALGAGAGTAVGTALGNSPIGLAVGAALGILCAVFAGRQGKRDS
Ga0307471_1006146452	3300032180	Hardwood Forest Soil	MIIVRARHTGTWASVGAVVGTAVGTALGNSPIGLAAGAALGVVLAMLAARPPRRPG
Ga0307472_1003564422	3300032205	Hardwood Forest Soil	MIFVRARRPGVWAAIGAAIGTAVGTALGNSPVGLALGAAMGVALAMLTARPAKRDD
Ga0307472_1004355152	3300032205	Hardwood Forest Soil	MVTRARHPGMWTAVGAGAGTALGTALGNTPIGLALGAALGLMWALYNARTRKQSC
Ga0307472_1005585532	3300032205	Hardwood Forest Soil	MVTRARRPGLWTAVGAGAGIALGTALGNTPVGLALGAALGIAWALFSARAGKQRS
Ga0307472_1021411722	3300032205	Hardwood Forest Soil	MIMVRARHTGALTAVGAALGTAVGTALGNSPVGLAAGAVLGIVLAMLAARPPRRSG
Ga0306920_1036622381	3300032261	Soil	HTGAWTVFGAAIGTAVGTALGNSPIGLALGAGMGVALAMLVARPLKRDG
Ga0335085_105667482	3300032770	Soil	MIFVRARRPGTWAAIGAAIGTGVGTALGNSPVGLALGAALGVALAMLAARPAKRGG
Ga0335082_102873634	3300032782	Soil	MIIIRARHTGTWTAIGAAAGTAIGTALGNSPMGLALGAGMGFALAILAARSARRGG
Ga0335083_103118644	3300032954	Soil	HTGTWTAIGAAAGTAIGTALGNSPMGLALGAGMGFALAILAARSARRGG
Ga0335076_101732222	3300032955	Soil	MIIVRARHTGAWTAIGAAVGIALGTALGNSPIGLALGAGMGVALSMLAARPGKRDC
Ga0310914_115660291	3300033289	Soil	MIVVRARHPGAWTAIGAAIGTAIGTALGNSPIGLALGAGMGVALAMLAA
Ga0326726_114201052	3300033433	Peat Soil	MVTRARNPGMWTAVGAGAGTVLGTALGNTPVGLALGAALGIAWALFAARARKQGY
Ga0314862_0034207_3_152	3300033803	Peatland	HPGLWTVLGAGAGTAIGTAFGNSPVGLALGAVLGIVLAVLSARPGRRGA
Ga0314862_0034940_267_437	3300033803	Peatland	MIIVRAKHPGLWTVLGAGAGTAVGTALGNSPIGLALGAVLGILWAVFSARPNRRGA
Ga0314864_0033481_420_590	3300033805	Peatland	MIIVRAKHPGLWTAVGAGAGTAVGTALGNSPIGLALGALLGILWAVLSARPNRRGA
Ga0314864_0094444_119_289	3300033805	Peatland	MIIVRAKHPGLWTVLGAGAGTAVGTALGNSPIGLALGAVLGILWAVFSARPNRRSA
Ga0370493_0064552_498_638	3300034129	Untreated Peat Soil	MWTAIGAGVGIVLGTALGNTPVGLAVGAMMGVAWALFSARPRKSSY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041927

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences