Metagenome / Metatranscriptome Family F041705

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041705
Family Type	Metagenome / Metatranscriptome
Number of Sequences	159
Average Sequence Length	65 residues
Representative Sequence	MFKNTVIALGAAVVLVTALGSASYAQQTQQEWWRAYENSKSGKHCVGGDESAASAYPSWMVCRPR
Number of Associated Samples	101
Number of Associated Scaffolds	158

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.28 %
% of genes near scaffold ends (potentially truncated)	16.98 %
% of genes from short scaffolds (< 2000 bps)	85.53 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.635 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (25.157 % of family members)
Environment Ontology (ENVO)	Unclassified (42.767 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.572 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 49.46% β-sheet: 2.15% Coil/Unstructured: 48.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 158 Family Scaffolds
PF02617	ClpS	48.10
PF13442	Cytochrome_CBB3	1.90
PF00034	Cytochrom_C	1.90
PF01738	DLH	1.90
PF13417	GST_N_3	0.63
PF03401	TctC	0.63
PF12860	PAS_7	0.63
PF04199	Cyclase	0.63
PF05990	DUF900	0.63
PF13650	Asp_protease_2	0.63
PF01425	Amidase	0.63
PF02518	HATPase_c	0.63
PF10387	DUF2442	0.63

COG ID	Name	Functional Category	% Frequency in 158 Family Scaffolds
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	48.10
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.63
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.63
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.63
COG4782	Esterase/lipase superfamily enzyme	General function prediction only [R]	0.63

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.64 %
Unclassified	root	N/A	38.36 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.64 %
Unclassified	root	N/A	38.36 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.64 %
Unclassified	root	N/A	38.36 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	55.35 %
Unclassified	root	N/A	38.36 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.63 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.63 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	53.46 %
Unclassified	root	N/A	38.36 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.63 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.36 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.61 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.63 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.63 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.36 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	5.03 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.14 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.63 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.63 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.36 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.03 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.14 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.26 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.63 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.36 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.03 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.14 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.26 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.63 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.36 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.03 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.14 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.26 %
Sediminibacterium	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Sediminibacterium	0.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.63 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.36 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.03 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.14 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.26 %
unclassified Sediminibacterium	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Sediminibacterium → unclassified Sediminibacterium	0.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.63 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.63 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.36 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	5.03 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.14 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.26 %
Sediminibacterium sp. RHBRASLY1	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Sediminibacterium → unclassified Sediminibacterium → Sediminibacterium sp. RHBRASLY1	0.63 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.63 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.63 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_120909362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2223	Open in IMG/M
3300003659\|JGI25404J52841_10130153	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	532	Open in IMG/M
3300004633\|Ga0066395_10100696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1392	Open in IMG/M
3300004633\|Ga0066395_10252472	Not Available	946	Open in IMG/M
3300004778\|Ga0062383_10286344	Not Available	787	Open in IMG/M
3300004798\|Ga0058859_11681473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300005186\|Ga0066676_11184493	Not Available	500	Open in IMG/M
3300005332\|Ga0066388_100058036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4065	Open in IMG/M
3300005332\|Ga0066388_100100918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3349	Open in IMG/M
3300005332\|Ga0066388_100117100	All Organisms → cellular organisms → Bacteria → Proteobacteria	3176	Open in IMG/M
3300005332\|Ga0066388_100124249	Not Available	3111	Open in IMG/M
3300005332\|Ga0066388_100155610	All Organisms → cellular organisms → Bacteria → Proteobacteria	2869	Open in IMG/M
3300005332\|Ga0066388_100499528	All Organisms → cellular organisms → Bacteria	1852	Open in IMG/M
3300005332\|Ga0066388_101629545	Not Available	1137	Open in IMG/M
3300005332\|Ga0066388_102116027	Not Available	1013	Open in IMG/M
3300005332\|Ga0066388_102506603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	937	Open in IMG/M
3300005332\|Ga0066388_102956529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	868	Open in IMG/M
3300005332\|Ga0066388_103359329	Not Available	818	Open in IMG/M
3300005332\|Ga0066388_108142942	Not Available	524	Open in IMG/M
3300005446\|Ga0066686_10623527	Not Available	733	Open in IMG/M
3300005447\|Ga0066689_10272365	Not Available	1046	Open in IMG/M
3300005454\|Ga0066687_10414767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	781	Open in IMG/M
3300005455\|Ga0070663_101524423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	595	Open in IMG/M
3300005555\|Ga0066692_10960739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	523	Open in IMG/M
3300005569\|Ga0066705_10471939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	786	Open in IMG/M
3300005587\|Ga0066654_10692678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300005713\|Ga0066905_100014461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3945	Open in IMG/M
3300005713\|Ga0066905_100268746	Not Available	1321	Open in IMG/M
3300005713\|Ga0066905_100282883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1293	Open in IMG/M
3300005713\|Ga0066905_100716091	Not Available	860	Open in IMG/M
3300005713\|Ga0066905_101121333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	699	Open in IMG/M
3300005833\|Ga0074472_10216691	Not Available	845	Open in IMG/M
3300005833\|Ga0074472_10924395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1196	Open in IMG/M
3300005843\|Ga0068860_101561446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	682	Open in IMG/M
3300005937\|Ga0081455_10018617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6602	Open in IMG/M
3300005937\|Ga0081455_10616925	Not Available	704	Open in IMG/M
3300006042\|Ga0075368_10321575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	670	Open in IMG/M
3300006755\|Ga0079222_10057758	Not Available	1840	Open in IMG/M
3300006794\|Ga0066658_10461460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	691	Open in IMG/M
3300006806\|Ga0079220_11566852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300006854\|Ga0075425_100989478	Not Available	960	Open in IMG/M
3300006904\|Ga0075424_100814088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	997	Open in IMG/M
3300006914\|Ga0075436_100528245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	865	Open in IMG/M
3300009012\|Ga0066710_101154709	Not Available	1199	Open in IMG/M
3300009012\|Ga0066710_101990261	Not Available	863	Open in IMG/M
3300009137\|Ga0066709_102898387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300009143\|Ga0099792_10055618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1944	Open in IMG/M
3300009792\|Ga0126374_10697239	Not Available	763	Open in IMG/M
3300009792\|Ga0126374_11875381	Not Available	503	Open in IMG/M
3300010043\|Ga0126380_10074088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1944	Open in IMG/M
3300010043\|Ga0126380_10224251	Not Available	1279	Open in IMG/M
3300010043\|Ga0126380_11431658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	609	Open in IMG/M
3300010046\|Ga0126384_10522040	Not Available	1027	Open in IMG/M
3300010046\|Ga0126384_10935218	Not Available	785	Open in IMG/M
3300010046\|Ga0126384_12276322	Not Available	523	Open in IMG/M
3300010047\|Ga0126382_10168061	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300010047\|Ga0126382_10533967	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	951	Open in IMG/M
3300010047\|Ga0126382_10541683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	945	Open in IMG/M
3300010047\|Ga0126382_11493771	Not Available	621	Open in IMG/M
3300010047\|Ga0126382_11707249	Not Available	588	Open in IMG/M
3300010047\|Ga0126382_11841847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300010047\|Ga0126382_11973453	Not Available	554	Open in IMG/M
3300010047\|Ga0126382_12087216	Not Available	542	Open in IMG/M
3300010047\|Ga0126382_12457713	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Sediminibacterium → unclassified Sediminibacterium → Sediminibacterium sp. RHBRASLY1	507	Open in IMG/M
3300010358\|Ga0126370_10090664	Not Available	2085	Open in IMG/M
3300010358\|Ga0126370_10756217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	861	Open in IMG/M
3300010358\|Ga0126370_11501874	Not Available	640	Open in IMG/M
3300010358\|Ga0126370_11761192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300010359\|Ga0126376_10444658	All Organisms → cellular organisms → Bacteria	1182	Open in IMG/M
3300010359\|Ga0126376_10543875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1085	Open in IMG/M
3300010362\|Ga0126377_10014467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6293	Open in IMG/M
3300010362\|Ga0126377_11165714	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	840	Open in IMG/M
3300010362\|Ga0126377_11290966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	802	Open in IMG/M
3300010362\|Ga0126377_11567603	Not Available	733	Open in IMG/M
3300010362\|Ga0126377_11723447	Not Available	702	Open in IMG/M
3300010362\|Ga0126377_11723447	Not Available	702	Open in IMG/M
3300010362\|Ga0126377_12494478	Not Available	593	Open in IMG/M
3300010362\|Ga0126377_12582066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	583	Open in IMG/M
3300010362\|Ga0126377_13399608	Not Available	515	Open in IMG/M
3300010366\|Ga0126379_11298552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	834	Open in IMG/M
3300010398\|Ga0126383_10454541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1331	Open in IMG/M
3300010398\|Ga0126383_11422445	Not Available	783	Open in IMG/M
3300012199\|Ga0137383_10123079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1893	Open in IMG/M
3300012200\|Ga0137382_10392264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	977	Open in IMG/M
3300012202\|Ga0137363_11099049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	676	Open in IMG/M
3300012207\|Ga0137381_11175995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	659	Open in IMG/M
3300012208\|Ga0137376_10891110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	764	Open in IMG/M
3300012210\|Ga0137378_11878715	Not Available	501	Open in IMG/M
3300012349\|Ga0137387_10284430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1195	Open in IMG/M
3300012357\|Ga0137384_10874775	Not Available	725	Open in IMG/M
3300012360\|Ga0137375_10078309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3457	Open in IMG/M
3300012362\|Ga0137361_11119760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	708	Open in IMG/M
3300012469\|Ga0150984_112679064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300012685\|Ga0137397_10003946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10338	Open in IMG/M
3300012924\|Ga0137413_10038952	All Organisms → cellular organisms → Bacteria → Proteobacteria	2677	Open in IMG/M
3300012925\|Ga0137419_10806817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	768	Open in IMG/M
3300012927\|Ga0137416_10497333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1049	Open in IMG/M
3300012927\|Ga0137416_12259504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300012929\|Ga0137404_11455864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	633	Open in IMG/M
3300012930\|Ga0137407_10034443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3982	Open in IMG/M
3300012930\|Ga0137407_11206542	Not Available	718	Open in IMG/M
3300012971\|Ga0126369_10118960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2430	Open in IMG/M
3300012971\|Ga0126369_12286836	Not Available	627	Open in IMG/M
3300012971\|Ga0126369_13671239	Not Available	503	Open in IMG/M
3300014154\|Ga0134075_10477642	Not Available	556	Open in IMG/M
3300014969\|Ga0157376_10265232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1611	Open in IMG/M
3300015054\|Ga0137420_1375427	All Organisms → cellular organisms → Bacteria	2088	Open in IMG/M
3300015242\|Ga0137412_10029021	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4516	Open in IMG/M
3300015371\|Ga0132258_11916368	Not Available	1492	Open in IMG/M
3300018028\|Ga0184608_10007284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3653	Open in IMG/M
3300018051\|Ga0184620_10053364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1144	Open in IMG/M
3300018053\|Ga0184626_10134353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1052	Open in IMG/M
3300018071\|Ga0184618_10142920	Not Available	972	Open in IMG/M
3300018072\|Ga0184635_10039764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1793	Open in IMG/M
3300018072\|Ga0184635_10275167	Not Available	664	Open in IMG/M
3300018074\|Ga0184640_10526441	Not Available	518	Open in IMG/M
3300018075\|Ga0184632_10331351	Not Available	655	Open in IMG/M
3300018076\|Ga0184609_10117331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1207	Open in IMG/M
3300018078\|Ga0184612_10093158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1575	Open in IMG/M
3300018078\|Ga0184612_10134250	Not Available	1294	Open in IMG/M
3300018078\|Ga0184612_10306465	Not Available	813	Open in IMG/M
3300018081\|Ga0184625_10317425	Not Available	812	Open in IMG/M
3300018433\|Ga0066667_10636172	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300020170\|Ga0179594_10256029	Not Available	660	Open in IMG/M
3300020170\|Ga0179594_10312971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	595	Open in IMG/M
3300021073\|Ga0210378_10288229	Not Available	618	Open in IMG/M
3300021560\|Ga0126371_11194413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	897	Open in IMG/M
3300021560\|Ga0126371_12588309	Not Available	615	Open in IMG/M
3300022756\|Ga0222622_10547123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	831	Open in IMG/M
3300025905\|Ga0207685_10440605	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	675	Open in IMG/M
3300027646\|Ga0209466_1004072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3043	Open in IMG/M
3300027716\|Ga0209682_10009782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2401	Open in IMG/M
3300027843\|Ga0209798_10561604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300027866\|Ga0209813_10137964	Not Available	863	Open in IMG/M
3300027874\|Ga0209465_10313235	Not Available	786	Open in IMG/M
3300027874\|Ga0209465_10335676	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300027903\|Ga0209488_10015594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5529	Open in IMG/M
3300028536\|Ga0137415_10165024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2047	Open in IMG/M
3300028782\|Ga0307306_10231462	Not Available	536	Open in IMG/M
3300028792\|Ga0307504_10057850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1128	Open in IMG/M
3300028811\|Ga0307292_10508799	Not Available	517	Open in IMG/M
3300028876\|Ga0307286_10265909	Not Available	630	Open in IMG/M
3300030990\|Ga0308178_1056100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	749	Open in IMG/M
3300031099\|Ga0308181_1095618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300031114\|Ga0308187_10165457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	749	Open in IMG/M
3300031124\|Ga0308151_1028455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	609	Open in IMG/M
3300031152\|Ga0307501_10117117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	691	Open in IMG/M
3300031184\|Ga0307499_10022025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1379	Open in IMG/M
3300031198\|Ga0307500_10020181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1432	Open in IMG/M
3300031198\|Ga0307500_10153067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	660	Open in IMG/M
3300031199\|Ga0307495_10080101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	736	Open in IMG/M
3300031424\|Ga0308179_1014961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	801	Open in IMG/M
3300031720\|Ga0307469_10588412	Not Available	992	Open in IMG/M
3300031720\|Ga0307469_12048176	Not Available	556	Open in IMG/M
3300031740\|Ga0307468_100307393	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300032174\|Ga0307470_10019201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3038	Open in IMG/M
3300032174\|Ga0307470_10145769	Not Available	1440	Open in IMG/M
3300032180\|Ga0307471_101306202	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300034643\|Ga0370545_088717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	657	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.20%
Host-Associated	Host-Associated	8.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.62%
Aquatic	Environmental → Aquatic	12.58%
Plants	Host-Associated → Plants	8.18%
Human	Host-Associated → Human	0.63%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.62%
Sediment	Environmental → Aquatic → Sediment	10.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.14%
Freshwater	Environmental → Aquatic → Freshwater	2.52%
Roots	Host-Associated → Plants → Roots	1.26%
Digestive System	Host-Associated → Human → Digestive System	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.52%
Loam	Environmental → Terrestrial → Soil → Loam	15.09%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.06%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.89%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.26%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.63%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.55%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.52%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.26%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.26%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.63%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.63%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.63%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	25.16%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.43%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	8.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.52%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.89%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	1.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.26%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.26%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.63%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.63%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.63%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.63%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.63%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.63%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.63%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.63%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.63%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.63%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300004798	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027716	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031124	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_140 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031424	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_150 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1209093622	3300002568	Soil	MFKNTVIALGAALVLVTALGSASYAQQNQQEWWRAYQNSKSGKHCAGGDESAASAYPSWMQCRNTR*
JGI25404J52841_101301531	3300003659	Tabebuia Heterophylla Rhizosphere	MFKNSLIALGAAAVLVTALSSASYAQKNPQEWWRAYETKSGKHCVGGEESAASAYPAWMTCRAR*
Ga0066395_101006963	3300004633	Tropical Forest Soil	MFKNTVIALGAAAVLMTALGSTSFAQQNPQEWWRAYENSKSGKHCVGGDEEAASAYPSWMRCSGR*
Ga0066395_102524721	3300004633	Tropical Forest Soil	MFKNTLIALGAAAVLVTALGSASYAQQNPQEWWRAYEKSKSGKHCVGGDDSAASAYP
Ga0062383_102863441	3300004778	Wetland Sediment	MFKTTVIALGAAAVLVTALGSASFAAQDNPQDWWRAYQAKSKSGKGCVAGEESAASAYPAWMLCR*
Ga0058859_116814732	3300004798	Host-Associated	MFKNSVIALGAAVVLVTALGSASYAQQNPQEWWRAYETSKSGKHCVGGDESAASAYPSWMQCRNTR*
Ga0066676_111844931	3300005186	Soil	MLKQTVVALGAAVVLVAALGSASYAQQSQQDWWRLYQQSQSGKHCVGGGGDESAAYPSWMECHRR*
Ga0066388_1000580365	3300005332	Tropical Forest Soil	MLKQTVAALGAVVVLVAVLGSAGYAQQSQQDWWRLYHESQSGKHCVGGEESAASAYPAWMQCNKR*
Ga0066388_1001009181	3300005332	Tropical Forest Soil	MFKNTLIALGAAVVLVTALGSASNAQQNAQEWWRAYENSKSGKHCVGGDDSAASAYPAWMQCSRR*
Ga0066388_1001171002	3300005332	Tropical Forest Soil	MLKKTVVALGAAVVLVAALGSTSYAQNSQQDWWRLYHESQSGKHCVGGDDSAASAYPAWMQCHRR*
Ga0066388_1001242492	3300005332	Tropical Forest Soil	MLKQTVVALGAAVVLVAALGSASYAQQSQQDWWRLYQQSQSGKHCVGGGGDESAAYPSWMYCHGR*
Ga0066388_1001556103	3300005332	Tropical Forest Soil	MLKKTVVALGAAVVLAAALGSTSYAQNSQQDWWRLYNESQSGKNCVGGDDSAASAYPAWMHCRKR*
Ga0066388_1004995283	3300005332	Tropical Forest Soil	MFKNTLIALGAAAVLVTALGSASYAQQNPQEWWRAYEKSKSGKHCVGGDDSAASAYPSWMQCNNR*
Ga0066388_1016295453	3300005332	Tropical Forest Soil	MLKQTLAGLGAAAVLVAALGSASYAQNSQKDWWRLYHESQSGKHCVGGDDEGGGYPSWMVCHRR*
Ga0066388_1021160273	3300005332	Tropical Forest Soil	MLKQTLVALGTVLILVTALGSASYAQQSQQDWWRLYHNSKSGKNCVGGGDESAAYPSWMQCHSR*
Ga0066388_1025066032	3300005332	Tropical Forest Soil	MFKSIVIALGATAVLVTALGSASYAQQNPQEWWRAYEKSKSGKHCVGGDDSAASAYPAWMQCSHR*
Ga0066388_1029565292	3300005332	Tropical Forest Soil	MFKNTVIALGATLVLVTALGSASYAQQNAQEWQRAYEKSKSGKNCVGGDESAASAYPSWMQCRNR*
Ga0066388_1033593291	3300005332	Tropical Forest Soil	MMKQTLVALGAAVVLVASLGSASYAQQTQQDWWRLYHNSQSGKNCVGGEESAASAYPAWMHCSNR*
Ga0066388_1081429422	3300005332	Tropical Forest Soil	MSKKTVVALGAAVVLVAALGSASYAQQNPQEWWRAYQQNQSKSGKHCVSGDETATSAYPSWMVC
Ga0066686_106235271	3300005446	Soil	MLKQTVVALSAVVVLVAALGSASYAQRTQQDWWRLYENSKSGKHCVGGGRDESAAYPSWMECHRR*
Ga0066689_102723651	3300005447	Soil	MFKNTVIALGAAVVLVTALGSASYAQQTQQEWWRAYQNSKSGKHCVGGDESAASAYPSWMVCSHR*
Ga0066687_104147671	3300005454	Soil	MFKNTVIALGAALVLVTALGSASYAQQNQQEWWRAYQKSKSAKPCAGGEESAASAYPSWMQCGNR*
Ga0070663_1015244231	3300005455	Corn Rhizosphere	MFKNSVIALSAAVVLVTALGSASYAQQNPQEWWRAYETSKSGKHCVGGDESAASAYPSWMQCRNTR*
Ga0066692_109607391	3300005555	Soil	MLKQTLVALGAVAVLTAALGSASYAQHSQQDWWRLYQESQSGKHCVGGDESAASAYPAWMICSHRQR*
Ga0066705_104719391	3300005569	Soil	NTVIGLGAAVVLVTALGSASYAQQTQQEWWRAYQNSKSGKHCVGGEESAASAYPSWMVCRPR*
Ga0066654_106926782	3300005587	Soil	MFKKTVIALGAAAVLVTALGSTSYAQQNQQEWWRAYQKSKSAKPCAGGEESAASAYPSWMQCGNR*
Ga0066905_1000144613	3300005713	Tropical Forest Soil	MFKNTLIALGAAAVLVTALGSASYAQQNPQEWWRAYEAKGKKGCVGGEESAASAYPAWMHCSNR*
Ga0066905_1002687462	3300005713	Tropical Forest Soil	MLKQTVVALGAVVVLIAALGSASYAQHSQQDWWRLYEQSKSGKHCVGDGGDESAAYPAWMQCHSR*
Ga0066905_1002828832	3300005713	Tropical Forest Soil	MLKQTLVALGAAVVLVASLGSASYAQHSQQDWWRLYQESQSGKHCVGGEESAASAYPAWMQCSYRQR*
Ga0066905_1007160911	3300005713	Tropical Forest Soil	MLKKTVVALGAAVVLVAALGSASHAQQSQQDWWRLYHNSQSGKNCVGGDDSAASAYPAWMHCHKR*
Ga0066905_1011213332	3300005713	Tropical Forest Soil	MLKKTVVALGAAVVLVAALGSTSYAQNSQQDWWRLYNESQSGKHCVGGDDSAASAYPAWMQCHKR*
Ga0074472_102166912	3300005833	Sediment (Intertidal)	MVTKTLIALGAALVLVSSLGSASVAQSNPQQWWRAYQSTPKAGKGCVSSEESAASAYPAWMHCR*
Ga0074472_109243952	3300005833	Sediment (Intertidal)	MLTKSLVALGAALVLVTSLGSASFAQSNPQEWWRAYQSGPKTGKGCVSGEESAASAYPAWMHCR*
Ga0068860_1015614462	3300005843	Switchgrass Rhizosphere	AAVVLVTALGSASYAQQNPQEWWRAYETSKSGKHCVGGDESAASAYPSWMQCRNTR*
Ga0081455_100186179	3300005937	Tabebuia Heterophylla Rhizosphere	MFKNTLIALGAAAVLVTALGSASYAQQNPQEWWRAYEAKGKKGCVGGEESAASAYPAWMHCSNNR*
Ga0081455_106169252	3300005937	Tabebuia Heterophylla Rhizosphere	MLKQTVVALGAVVVLTAALGSASYAQHSQQDWWRLYEQSKSGKHCVGGGGDESAAYPAWMQCHSR*
Ga0075368_103215752	3300006042	Populus Endosphere	MFKNTVIALGAAAFLVTAFGSASFAQQNPQEWWRAYETKSGKHCVSGEESAASAYPAWMTCRTR*
Ga0079222_100577581	3300006755	Agricultural Soil	MLKNTVIALGAAVVLVTALGSTSYAQQTQKEWWDAYQKSKSGKHCVSGEESATSAYPSWMVCNAR*
Ga0066658_104614602	3300006794	Soil	MFKNTVIALGAAVVLVTALGSASYAQQTQQEWWRAYQNSKSGKHCVGGDESAASAYPSWMVCRPR*
Ga0079220_115668521	3300006806	Agricultural Soil	MFKNTVIALGAAVVLVTALGSASYGQQTQKEWWDAYQKSKSGKHCVSGEESATSAYPSWMRCQVR*
Ga0075425_1009894782	3300006854	Populus Rhizosphere	MFKNTAIALGAAAVLVTAFGSASYAQQNPQEWWRAYETKSGKHCIAGEESAASAYPAWMTCRGR*
Ga0075424_1008140882	3300006904	Populus Rhizosphere	MSKNTAIALGAAAVLVTAFGSASYAQQNPQEWWRAYETKSGKHCIAGEESAASAYPAWMTCRGR*
Ga0075436_1005282452	3300006914	Populus Rhizosphere	MFKNTVIALGAAVVLVTALGSASYAQQNQQEWWRAYQNSKSGKHCAGGDDSAASAYPSWMQCRNTR*
Ga0066710_1011547091	3300009012	Grasslands Soil	MFKNTVIALGAAVVLVTALGSASYAQQNPQEWWRAYQNSKSGKHCVAGDENAASAYPSWMVCQPR
Ga0066710_1019902611	3300009012	Grasslands Soil	MLKQTVVALTAVVVLVAALGSASYAQQSQQDWWRLYQQSQSGKHCVGGGGDDSAAYPSWMECHRR
Ga0066709_1028983871	3300009137	Grasslands Soil	SAMLKKTLVALGAVVVLVSALGSASYAQQYDWSRAYNSKAGQNCVNGTTTVDENAASANPSWWTHCR*
Ga0099792_100556181	3300009143	Vadose Zone Soil	IALGAAVVLVTALGSASYAQQTQQEWWRAYQNSKSGKHCVGGEESAASAYPSWMVCRPR*
Ga0126374_106972392	3300009792	Tropical Forest Soil	MLKKTVVALGAAIVLVAALGSTSYAQNSQQDWWRLYHESQSGKHCVGGDDSAASAYPAWMQCHRR*
Ga0126374_118753811	3300009792	Tropical Forest Soil	MLKQTLAGLGAAAVLVAALGSASYAQNSQKDWWRLYHESQSGKHCVGGDDEGAAYPSWMQCHRR*
Ga0126380_100740883	3300010043	Tropical Forest Soil	DGASNTQEKSAMLRQTVVALGAAVVLVAALGSASYAQQSQQDWWRLYQQSQSGKHCVGGAGDESGAYPSWMYCHRR*
Ga0126380_102242512	3300010043	Tropical Forest Soil	MLKQTLVALGAVVVLVVALGSASYAQQSQQDWWRAYNDSKSGKHCVGGGDDESAAAYPSWMRCHGR*
Ga0126380_114316582	3300010043	Tropical Forest Soil	MLKQTLVALGAVVVLVAALGSASYAQHSQQDWWRLYQESQSGKHCVGGEESAASAYPAWMQCSYRQR*
Ga0126384_105220402	3300010046	Tropical Forest Soil	MLKQSLVALGAVVVLVAALGSASYAQQSQQDWWRAYNDSKSGKHCVGGDDESAAAYPSWMRCHSR*
Ga0126384_109352182	3300010046	Tropical Forest Soil	MFKNTLIALGAAAVLVTALGSASYAQQNPQEWWRAYQTSKSGKHCAGGEESAASAYPAWMTCPGR*
Ga0126384_122763222	3300010046	Tropical Forest Soil	MFKNTVIALGAAIVLVTALGSASYAQQNPQEWWRAYQNSKSGKNCVSGDENATSAYPSWMVCR*
Ga0126382_101680612	3300010047	Tropical Forest Soil	MFKNTVIALGAAIVLVTALGSASYAQQNPQEWWRAYQNSKSGKHCVSGDESATSAYPSWMVCR*
Ga0126382_105339672	3300010047	Tropical Forest Soil	MLKQTLAALGAAAVLVAALGSASYAQNSQKDWWRLYHESQSGKHCVGGDDEGGGYPSWMVCHRR*
Ga0126382_105416833	3300010047	Tropical Forest Soil	DGAGNPQEKSAMLKQTLVALGAAVVLVASLGSASYAQHSQQDWWRLYQESQSGKHCVGGEESAASAYPAWMQCSYRQR*
Ga0126382_114937711	3300010047	Tropical Forest Soil	MLKQTVVALGAVVVLAAALSSASYAQHSQQDWWRLYEQSKSGKHCVGGGGDESAAYPAWMQCHSR*
Ga0126382_117072492	3300010047	Tropical Forest Soil	MLKQTLVALGAVVVLVAALGSASYAQQSQQDWWRAYNNSKSGKHCVGGDDESAAAYPSWMRCHNR*
Ga0126382_118418471	3300010047	Tropical Forest Soil	MFKNTVIALGAAAVLVTALGSASYAQQNPQEWWRAYEAKGKKGCVGGEESAASAYPAWMLCSNR*
Ga0126382_119734531	3300010047	Tropical Forest Soil	MLKQTLVALGAVVVLVAALGSASYAQQSQQDWWRAYNDSKSGKHCVGGDDESAAAYPSWMRCHGR*
Ga0126382_120872161	3300010047	Tropical Forest Soil	MFTNTLIALGAAAVLVTALGSASYAQQNPQEWWRAYEKSKSGKHCVGGDEDAASAYPSWMRCHNR*
Ga0126382_124577131	3300010047	Tropical Forest Soil	VVLVAALGSASYAQQSQQDWWRLYEQSQSGKHWVGGDDESAAAYPSWMQCHRR*
Ga0126370_100906644	3300010358	Tropical Forest Soil	MFKNTVIALGAAAVLMTALGSTSFAQQNPQEWWRAYENSKSGKHCVGGDDEAASAYPSWMRCSGR*
Ga0126370_107562171	3300010358	Tropical Forest Soil	MLKQTLVALGAVVVLVAALGSASYAQQSQQDWWRAYQNAQSGKNCIGSGVDDEAASAYPSWM
Ga0126370_115018741	3300010358	Tropical Forest Soil	MFKNTVVALGAVVLLVAALGSASYAQQSQQDWWRAYNNSKSGKHCIGGTDDEAASAYPSWMRCQGR*
Ga0126370_117611922	3300010358	Tropical Forest Soil	MFKNTVIALGAAVVLVTALGSASYAQQTQQEWWNAYQKSKSGKHCVRGEESAASAYPSWMVCRPE*
Ga0126376_104446582	3300010359	Tropical Forest Soil	MLKQTLVALGTVLILVTALGSASYAQQSQQDWWRLYHNSKSGKNCVGGGGDESAAYPSWMYCHHR*
Ga0126376_105438752	3300010359	Tropical Forest Soil	MFKNTVIALGAAIVLVTALGSASYAQQNPQEWWRAYQNSKSGKHCVSGDESATSAYPSWMVCQ*
Ga0126377_100144671	3300010362	Tropical Forest Soil	MFKNTVIALGAAAVLVTALGSASYAQQNPQEWWRAYEAKGKKGCVGGEESAASAYPAWMHCSNR*
Ga0126377_111657141	3300010362	Tropical Forest Soil	MLKQTLVALGAVVVLVTALGSASYAQQSQQDWWRLYNNSKSGKNCVGGDESAASAYPAWMHCNNNR*
Ga0126377_112909662	3300010362	Tropical Forest Soil	MLKAVLTLGTAVVLVTALGSATYAQQNLNDWSRAYNSKAGKNCCGTANVDDNAASAYPSWWTHCR*
Ga0126377_115676031	3300010362	Tropical Forest Soil	MFKNTLIALGAAAVLVTALGSASYAQQNPQEWWRAYEKSKSGKHCVGGDDSAASAYPAWMQCSHR*
Ga0126377_117234471	3300010362	Tropical Forest Soil	MFKNTIIALGAAVVLVTALGSASYAQQNSQEWWRAYQQKSGKRCVGGEESAASAYPAWMICQPR*
Ga0126377_117234472	3300010362	Tropical Forest Soil	MLKNTVIALGAAVVLVTALGSASYAQQNPQEWWRAYETKSGKHCVSGEESATSAYPSWMVCNPR*
Ga0126377_124944781	3300010362	Tropical Forest Soil	MFKNTVIALGAAAVLVTALGSASYAQKNPQEWWRAYEKSKSGRHCVGGDDSAASAYPSWMQCSHR*
Ga0126377_125820661	3300010362	Tropical Forest Soil	KKTVVALGAAVVLVAALGSTSYAQNSQQDWWRLYNESQSGKHCVGGDDSAASAYPAWMQCHKR*
Ga0126377_133996082	3300010362	Tropical Forest Soil	MLKQTLVALGAVVVLVAALGSASYAQQNATDWQRAYNSKAGKNCVGGSTVDENAASAYPSWWTQCR*
Ga0126379_112985521	3300010366	Tropical Forest Soil	MFKNTVIALGAAAVLMTALGSTSFAQQNPQEWWRAYENSKSGKHCVGGDDEAASAYPSWMRCNGR*
Ga0126383_104545411	3300010398	Tropical Forest Soil	MFKNTVIALGAAIVLVTALGSASYAQQNPQEWWRAYQNSKSGKNCVSGDESATSAYPSWMVCR*
Ga0126383_114224451	3300010398	Tropical Forest Soil	MLKQTLVALGAVVVLVAALGSASYAQHSQQDWWRAYNDSKSGKHCVGGDDESAAAYPSWMRCHGR*
Ga0137383_101230794	3300012199	Vadose Zone Soil	MFKNTVIVLGVAVVLVTALGSASYAQQTQQEWWRAYQNSKSGKHCVGGDESAASAYPSWMVCSHR*
Ga0137382_103922642	3300012200	Vadose Zone Soil	MFKNTVIVLGVAVVLVTALGSASYAQQTQQEWWRAYQNSKSGKHCVGGDEGAASAYPAWMHCRPR*
Ga0137363_110990491	3300012202	Vadose Zone Soil	MFKNTVIALGAAVVLVTALGSASYAQQTQQEWWRAYQNSKSGKHCVGGDESAASAYPSWMVCRTR*
Ga0137381_111759952	3300012207	Vadose Zone Soil	MFKNTVIALGAAVVLVTALGSASYAQQTQQEWWRAYQNSKSGKHCVGGDEGAASAYPSWMVCRPR*
Ga0137376_108911102	3300012208	Vadose Zone Soil	MFKNTVIALGAAVVLVTALGSASYAQQTPQEWQRAYENSKSGKHCVGGDESAASAYPSWMVCRPR*
Ga0137378_118787151	3300012210	Vadose Zone Soil	MFKNTVIVLGVAVVLVTALGSASYAQQTQQEWWRAYQNSKSGKHCVGGDEGAASA*
Ga0137387_102844302	3300012349	Vadose Zone Soil	MFKNTVIALGAAVVLVTALGSASYAQQTQQEWWRAYENSKSGKHCVGGDESAASAYPSWMVCSHR*
Ga0137384_108747751	3300012357	Vadose Zone Soil	MFKNTVIVLGVAVVLVTALGSASYAQQTQQEWWRAYQNSKSGKHCVGGDEGAASAYPAWMVCHHR*
Ga0137375_100783096	3300012360	Vadose Zone Soil	MFKNTVIALGAAVVLVTALGSASYAQQTQQEWWRAYENSKSGKHCVGGDESAASAYPSWMVCRPR*
Ga0137361_111197601	3300012362	Vadose Zone Soil	MFKNTVIALGAAVVLVTALGSASYAQQTPQEWQRAYENSKSGKHCVGGDESAASAYPSWMVCRTR*
Ga0150984_1126790642	3300012469	Avena Fatua Rhizosphere	EQQNRRPPMFKNAVIALGAAAVLMTALGSASYAQQNPQEWWRAYENSKSGKRCAGGEESAASAYPSWMQCRNTR*
Ga0137397_1000394610	3300012685	Vadose Zone Soil	MFKNTVIALGAAVVLVTALGSASYAQQNPQEWWRAYENSKSGKKHCVGGDESAASAYPSWMVCHPR*
Ga0137413_100389526	3300012924	Vadose Zone Soil	FKNTVIALGAAVVLVTALGSASYAQQNPQEWWRAYENSKSGKKHCVGGDESAASAYPSWMVCRPR*
Ga0137419_108068171	3300012925	Vadose Zone Soil	MFKNTVIALGAAVVLVTALGSASYAQQTPQDWQRAYENSKSGKHCVGGDESAASAYPSWMVCRPR*
Ga0137416_104973332	3300012927	Vadose Zone Soil	MFKNTVIALGVAVVLVTALGSASYAQQTQQEWWRAYQNSKSGKHCVGGDEGAASAYPAWMVCRHR*
Ga0137416_122595042	3300012927	Vadose Zone Soil	VVLVTALGSASYAQQNPQEWWRAYENSKSGKKHCVGGDESAASAYPSWMVCHPR*
Ga0137404_114558641	3300012929	Vadose Zone Soil	MFKNTVIALGAAVVLVTALGSASYAQQNAQEWQRAYENSKSGKKHCVGGDESAASAYPSWMVCHSR*
Ga0137407_100344433	3300012930	Vadose Zone Soil	MFKNTVIALGAAVVLVTALGSASYAQQNAQEWQRAYENSKSGKKHCVGGDDSASSAYPSWMVCHPR*
Ga0137407_112065422	3300012930	Vadose Zone Soil	MLKKTALALGAAVVLVMALGSTSYAQQNQSDWQRAYNSKAGKNCVGGSSDENAASAYPSWWTNCR*
Ga0126369_101189601	3300012971	Tropical Forest Soil	MFKNTVVALGAVVLLVAALGSASYAQQSQQDWWRAYNNSKSGKHCIGGGDDEAASAYPSWMRCQGR*
Ga0126369_122868362	3300012971	Tropical Forest Soil	MFKNTLIALGAAAVLVTALGSASYAQQNPQEWWRAYEKSKSGKHCVSGEESATSAYPSWMVCNSR*
Ga0126369_136712391	3300012971	Tropical Forest Soil	MFKNTVIALGAAVVLVTALGSASYAQQTQQEWWRAYQNSKSGKNCVGGDESAASAYPSWMQCNNR*
Ga0134075_104776421	3300014154	Grasslands Soil	VVALGAAVVLVAALGSASYAQQSQQDWWRLYQQSQSGKHCVGGGGDDSAAYPSWMECHRR
Ga0157376_102652322	3300014969	Miscanthus Rhizosphere	MFKNSVIALGAAVVLVTALGSASYAQQNPQEWWRAYQASKSGKHCVGGDDSAASAYPSWMQCRNTR*
Ga0137420_13754275	3300015054	Vadose Zone Soil	MLKNTVIALGAAVVLVTALGSASYAQQNPQEWWRAYENSKSGKKHCVGGDESAASAYPSWMVCHPR*
Ga0137412_100290218	3300015242	Vadose Zone Soil	MFKNTVIALGAAVVLVTALGSASYAQQNPQEWWRAYENSKSGKKHCVGGDESAASAYPSWMVCRPR*
Ga0132258_119163681	3300015371	Arabidopsis Rhizosphere	MFKNSVIALGAAVVLVTALGSASYAQQNPQEWWRAYQTSKSGKHCAGGDESAASAYPSWMQCRNTR*
Ga0184608_100072844	3300018028	Groundwater Sediment	MFKKTVIALGAAVVLVTALGSASYAQQNPQEWWRAYEKSKSGKKHCVGGDDSAASAYPSWMVCHPR
Ga0184620_100533641	3300018051	Groundwater Sediment	MFKNTVIALGAAVVLVTALGSASYAQQNPQEWWRAYENSKSGKKRCVGGDESAASAYPSWMVCHPR
Ga0184626_101343532	3300018053	Groundwater Sediment	MFKKTLIALGAAALLVTAFGSARYAQDNPQEWWRAYETKSKKGCVGGEESAASAYPSWMACR
Ga0184618_101429201	3300018071	Groundwater Sediment	MCKKTVIALGAAVVLVTALGSASYAQQNPQEWWRAYENSKSGKKHCVGGDDSAASAYPSWMVCHPR
Ga0184635_100397642	3300018072	Groundwater Sediment	MFKKTLIALGAAALLVTAFGSASYAQQNPQEWWRAYETKSKKGCVGGEESAASAYPSWMACR
Ga0184635_102751672	3300018072	Groundwater Sediment	MLKQTLVALGAVVVLVAALGSASYAQQSQQDWWRAYNNSKSGKHCVGGGDESAAAYPSWMRCHSR
Ga0184640_105264411	3300018074	Groundwater Sediment	MFKKTLIALGAAALLVTAFGSASYAQQNPQEWWRAYEAKSKKGCVGGEESAASAYPSWMACR
Ga0184632_103313511	3300018075	Groundwater Sediment	MLKQTLVALGAVVVLVAALGSASYAQQSQQDWWRAYNNSKSGKHCVGGEESATAAYPSWMQCHSR
Ga0184609_101173311	3300018076	Groundwater Sediment	MFKKTLIALGAAALLVTAFGSASYAQQQNPQEWWRAYEAKSKKGCVSGEESAASAYPAWMHCR
Ga0184612_100931581	3300018078	Groundwater Sediment	MFKKTVTALAAAVVLVTAFGSASYAQQNPQEWWRAYEAKSKKGCVGGEESAASAYPSWMACR
Ga0184612_101342502	3300018078	Groundwater Sediment	MFKRTLIALGAAALLVTAFGSASYAQQQNPQEWWRAYEAKSKKGCVSGEESAASAYPAWMHC
Ga0184612_103064652	3300018078	Groundwater Sediment	MLKQTLVALGAVVVLVTALGSASYAQQSQQDWWRAYNNSKSGKNCVGGEDSAASAYPSWMQCHNR
Ga0184625_103174251	3300018081	Groundwater Sediment	MLKQTLVALGAVVVLVAALGSASYAQQSQQDWWRAYNNSKSGKHCVGGDDESAAAYPSWMRCHSR
Ga0066667_106361722	3300018433	Grasslands Soil	MLKQTVVALSAVVVLVAALGSASYAQRTQQDWWRLYENSKSGKHCVGGEESAASAYPSWMVCR
Ga0179594_102560291	3300020170	Vadose Zone Soil	MFKNTVIALGAAVVLVTALGSASYAQQTQEEWWRAYQSSKSGKHCVGGDESAASAYPSWMQCRNTR
Ga0179594_103129712	3300020170	Vadose Zone Soil	MFKNTVITLGAAVVLVTALGSASYAQQTQQEWWRAYQNSKSGKHCVGGDEGAASAYPSWMVCRPR
Ga0210378_102882291	3300021073	Groundwater Sediment	MFKKTVTALAAAVVLVTAFGSASYAQQNPQEWWRAYEAKSKKGCVSGEESAASAYPAWMHCR
Ga0126371_111944132	3300021560	Tropical Forest Soil	MFKNTVIALGAAAVLMTALGSTSFAQQNPQEWWRAYENSKSGKHCVGGDDEAASAYPSWMRCSGR
Ga0126371_125883092	3300021560	Tropical Forest Soil	MFKNTVVALGAVVLLVAALGSASYAQQSQQDWWRAYNNSKSGKHCIGGGDDEAASAYPSWMRCQGR
Ga0222622_105471232	3300022756	Groundwater Sediment	MFKNTVIALGAAVVLVTALGSASYAQQNPQEWWRAYQKSSKSGKPCVGGEESAASAYPSWMVCR
Ga0207685_104406051	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MFKNSVIALSAAVVLVTALGSASYAQQNPQEWWRAYETSKSGKHCVGGDESAASAYPSWMQCRNTR
Ga0209466_10040721	3300027646	Tropical Forest Soil	MFKNTLIALGAAAVLVTALGSASYAQQNPQEWWRAYEKSKSGKHCVGGEESAASAYPAWMHCHKR
Ga0209682_100097822	3300027716	Wetland Sediment	MFKTTVIALGAAAVLVTALGSASFAAQDNPQDWWRAYQAKSKSGKGCVAGEESAASAYPAWMLCR
Ga0209798_105616041	3300027843	Wetland Sediment	ALGAALVLVTSLGSASFAQSNPQEWWRAYQSGPKTGKGCVGSEESAASAYPAWMHCR
Ga0209813_101379642	3300027866	Populus Endosphere	MFKNTVIALGAAAFLVTAFGSASFAQQNPQEWWRAYETKSGKHCVSGEESAASAYPAWMTCRTR
Ga0209465_103132352	3300027874	Tropical Forest Soil	MFKNTVIALGAAAVLMTALGSTSFAQQNPQEWWRAYENSKSGKHCVGGDEEAASAYPSWMRCSGR
Ga0209465_103356762	3300027874	Tropical Forest Soil	MFKNTLIALGAAAVLVTALGSASYAQQNPQEWWRAYEKSKSGKHCVGGDDSAASAYPSWM
Ga0209488_100155947	3300027903	Vadose Zone Soil	MFKNTVIALGAAVVLVTALGSASYAQQNPQEWWRAYENSKSGKKHCVGGDESAASAYPSWMVCRPR
Ga0137415_101650242	3300028536	Vadose Zone Soil	MFKNTVIALGAAVVLVTALGSASYAQQTQQEWWRAYQNSKSGKHCVGGDEGAASAYPAWMVCRHR
Ga0307306_102314621	3300028782	Soil	MFKNTVIALGTALVLVTALGSTSYAQQNQQEWWRAYQDSKSGKRCAGGDESAASAYPSWMQCRNTR
Ga0307504_100578502	3300028792	Soil	MFKNTLIALGAAVVLVTAFGSASYAQQNPQEWWRAYENSKSGKHCVGGEESAASAYPSWMQCNHR
Ga0307292_105087991	3300028811	Soil	MFKNTVIALGAAVVLVTALGSASYAQQNPQEWWRAYENSKSGKKHCVGGDESAASAYPSWMVCHPR
Ga0307286_102659092	3300028876	Soil	MFKNTVIALGTALVLVTALGSTSYAQQNQQEWWRAYQDSKSGKHCAGGDESAASAYPSWMQCRNTR
Ga0308178_10561001	3300030990	Soil	MFKNTVIALGAAVVLVTALGSASYAQQNPQEWWRAYEKSKSGKKHCVGGDDSAASAYPSWMVCHPR
Ga0308181_10956181	3300031099	Soil	MFKKTVIALGAAVVLVTALGSASYAQQNPQEWWRAYENSKSGKKHCVGGDDSAASAYPSWMVCHPR
Ga0308187_101654572	3300031114	Soil	MFKNTVIALGAAAVLVTAIGSASYAQQNPQEWWRAYESSKSGKRCAGGDESAASAYPSWMQCRNTR
Ga0308151_10284551	3300031124	Soil	GDLPMFKNTVIALGTALVLVTALGSTSYAQQNQQEWWRAYQDSKSGKRCAGGDESAASAYPSWMQCRNTR
Ga0307501_101171172	3300031152	Soil	MFKNSVIALGAAVVLVTALGSASYAQQNPQEWWRAYQGSKSGKHCVGGDESAASAYPSWMVCHPR
Ga0307499_100220252	3300031184	Soil	MFKNTVIALGAALVLVTALGSASFAQQNQQDWWRAYQNSKSGKHCAGGDESAASAYPSWMQCRNTR
Ga0307500_100201811	3300031198	Soil	LGAAVVLVTALGSASYAQQNPQEWWRAYQASKSGKHCVGGDDSAASAYPSWMQCNNR
Ga0307500_101530672	3300031198	Soil	MFKNTVIALSAAVVLVTALGSASYAQQNQQEWWRAYQNSKSGKHCAGGDESAASAYPSWMQCRNTR
Ga0307495_100801011	3300031199	Soil	MFKNTLIALGAAVVLVTALGSASFAQQNQQDWWRAYQNSKSGKHCAGGDESAASAYPSWMQCRNTR
Ga0308179_10149612	3300031424	Soil	AVVLVTALGSASYAQQNPQEWWRAYEKSKSGKKHCVGGDDSAASAYPSWMVCHPR
Ga0307469_105884121	3300031720	Hardwood Forest Soil	MFKNTLIALGAAAFLVTALGSASYAQQNPQEWWRAYEAKGKKGCVGGEESAASAYPAWMHCSNR
Ga0307469_120481761	3300031720	Hardwood Forest Soil	MLKQTVVAVGAVVVLVAALGSASYAQHSQQDWWRLYEQSKSGKHCVGGGGDESAAYPAWMQCHSR
Ga0307468_1003073932	3300031740	Hardwood Forest Soil	MLKQTVVALGAVVVLVAALGSASYAQHSQQDWWRLYEQSKSGKHCVGGGGDESAAYPAWMQCHSR
Ga0307470_100192016	3300032174	Hardwood Forest Soil	MLKKTVIALGAAVVLVTALGSASYAQQNPQEWWRAYETKSGKHCVAGEESAASAYPAWMTCRGR
Ga0307470_101457691	3300032174	Hardwood Forest Soil	MFKTTLIALGAAVVFVTALGSASLAQQNPQEWWRAYQNSKSGKHCAGGDESAASAYPSWMQCRNT
Ga0307471_1013062021	3300032180	Hardwood Forest Soil	MFKNTVIALGAAVVLVTALGSASYAQQNPQEWWRAYQNSKSGKNCAGGDEGAASAYPAWMQCRNTR
Ga0370545_088717_428_625	3300034643	Soil	MFKNTAIALGAAVVLVTALGSASYAQQSSQEWRRAYENSKSGKHCVGGDESAASAYPAWMQCRNR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041705

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences