Metagenome / Metatranscriptome Family F041472

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041472
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	63 residues
Representative Sequence	VAIFDVPQRFSQKWVHDKVPRMDSTEFHAMFHEAATRGWDEDELRQLARMWAEESGRPDASTG
Number of Associated Samples	110
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	64.78 %
% of genes near scaffold ends (potentially truncated)	21.88 %
% of genes from short scaffolds (< 2000 bps)	89.38 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.375 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.250 % of family members)
Environment Ontology (ENVO)	Unclassified (26.875 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.375 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.76% β-sheet: 0.00% Coil/Unstructured: 58.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF00589	Phage_integrase	3.75
PF13298	LigD_N	3.12
PF09954	DUF2188	2.50
PF00583	Acetyltransf_1	1.88
PF13602	ADH_zinc_N_2	1.88
PF13466	STAS_2	1.88
PF13581	HATPase_c_2	1.88
PF00353	HemolysinCabind	1.25
PF12893	Lumazine_bd_2	1.25
PF00857	Isochorismatase	1.25
PF04545	Sigma70_r4	1.25
PF00072	Response_reg	0.62
PF00501	AMP-binding	0.62
PF00196	GerE	0.62
PF03795	YCII	0.62
PF01979	Amidohydro_1	0.62
PF00107	ADH_zinc_N	0.62
PF04542	Sigma70_r2	0.62
PF04107	GCS2	0.62
PF02586	SRAP	0.62
PF03640	Lipoprotein_15	0.62
PF13400	Tad	0.62
PF00313	CSD	0.62
PF02517	Rce1-like	0.62
PF13229	Beta_helix	0.62
PF04026	SpoVG	0.62
PF02738	MoCoBD_1	0.62
PF02746	MR_MLE_N	0.62
PF07883	Cupin_2	0.62
PF08240	ADH_N	0.62
PF12697	Abhydrolase_6	0.62
PF13365	Trypsin_2	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	1.25
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.25
COG4948	L-alanine-DL-glutamate epimerase or related enzyme of enolase superfamily	Cell wall/membrane/envelope biogenesis [M]	1.25
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.62
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.62
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.62
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.62
COG2088	DNA- and RNA-binding protein SpoVG, cell septation regulator	Transcription [K]	0.62
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.62
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.62
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	0.62
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.62
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.38 %
All Organisms	root	All Organisms	35.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.38 %
cellular organisms	root	All Organisms → cellular organisms	35.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.38 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.00 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	28.75 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.38 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	19.38 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4.38 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.62 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.38 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.88 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	4.38 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.25 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.62 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.38 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	7.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.38 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.25 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.62 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.62 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.38 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.62 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.62 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.62 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.62 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.38 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.62 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.62 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.62 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.62 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.38 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.62 %
unclassified Conexibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter	0.62 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.62 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.62 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.38 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.62 %
Conexibacter sp. S30A1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	0.62 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.62 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.62 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908009\|FWIRA_GRAM18402F1NR7	Not Available	502	Open in IMG/M
3300002568\|C688J35102_119863508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	797	Open in IMG/M
3300002568\|C688J35102_120096320	Not Available	878	Open in IMG/M
3300002568\|C688J35102_120285870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	968	Open in IMG/M
3300002568\|C688J35102_120504409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1125	Open in IMG/M
3300002568\|C688J35102_120515895	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300002568\|C688J35102_120986010	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	6456	Open in IMG/M
3300004114\|Ga0062593_100041051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2774	Open in IMG/M
3300004114\|Ga0062593_100619510	Not Available	1036	Open in IMG/M
3300004153\|Ga0063455_101491244	Not Available	527	Open in IMG/M
3300004479\|Ga0062595_100078001	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300004479\|Ga0062595_100078473	Not Available	1658	Open in IMG/M
3300004479\|Ga0062595_100265095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1127	Open in IMG/M
3300004479\|Ga0062595_100834589	Not Available	765	Open in IMG/M
3300004643\|Ga0062591_100376855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1160	Open in IMG/M
3300004643\|Ga0062591_100596350	Not Available	975	Open in IMG/M
3300004643\|Ga0062591_100647308	Not Available	944	Open in IMG/M
3300005093\|Ga0062594_100243940	Not Available	1306	Open in IMG/M
3300005093\|Ga0062594_100660372	Not Available	933	Open in IMG/M
3300005093\|Ga0062594_101086328	Not Available	780	Open in IMG/M
3300005093\|Ga0062594_102202788	Not Available	596	Open in IMG/M
3300005093\|Ga0062594_103285375	Not Available	508	Open in IMG/M
3300005148\|Ga0066819_1017417	Not Available	575	Open in IMG/M
3300005329\|Ga0070683_100025938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → unclassified Conexibacter → Conexibacter sp. S30A1	5270	Open in IMG/M
3300005329\|Ga0070683_100458707	Not Available	1216	Open in IMG/M
3300005341\|Ga0070691_10225962	Not Available	994	Open in IMG/M
3300005343\|Ga0070687_100908629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300005365\|Ga0070688_101594858	Not Available	533	Open in IMG/M
3300005367\|Ga0070667_100642093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	980	Open in IMG/M
3300005434\|Ga0070709_10171394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1517	Open in IMG/M
3300005435\|Ga0070714_100556934	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300005437\|Ga0070710_10812581	Not Available	669	Open in IMG/M
3300005439\|Ga0070711_100325773	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1229	Open in IMG/M
3300005439\|Ga0070711_100874038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	766	Open in IMG/M
3300005440\|Ga0070705_101305578	Not Available	602	Open in IMG/M
3300005441\|Ga0070700_100218418	Not Available	1349	Open in IMG/M
3300005445\|Ga0070708_100459099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1202	Open in IMG/M
3300005458\|Ga0070681_10037888	All Organisms → cellular organisms → Bacteria	4835	Open in IMG/M
3300005459\|Ga0068867_101983975	Not Available	550	Open in IMG/M
3300005466\|Ga0070685_10078989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1968	Open in IMG/M
3300005526\|Ga0073909_10174340	Not Available	913	Open in IMG/M
3300005535\|Ga0070684_100475508	Not Available	1156	Open in IMG/M
3300005546\|Ga0070696_100876335	Not Available	743	Open in IMG/M
3300005547\|Ga0070693_100517681	Not Available	849	Open in IMG/M
3300005549\|Ga0070704_100705385	Not Available	895	Open in IMG/M
3300005578\|Ga0068854_102136668	Not Available	517	Open in IMG/M
3300005843\|Ga0068860_100511958	Not Available	1199	Open in IMG/M
3300006163\|Ga0070715_10143894	Not Available	1161	Open in IMG/M
3300006175\|Ga0070712_100982848	Not Available	730	Open in IMG/M
3300006175\|Ga0070712_101184892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	664	Open in IMG/M
3300006237\|Ga0097621_102179242	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300006573\|Ga0074055_11471946	Not Available	595	Open in IMG/M
3300006573\|Ga0074055_11506631	Not Available	519	Open in IMG/M
3300006581\|Ga0074048_11820069	Not Available	667	Open in IMG/M
3300006794\|Ga0066658_10393714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	750	Open in IMG/M
3300006871\|Ga0075434_100459003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1295	Open in IMG/M
3300006871\|Ga0075434_100592084	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300006871\|Ga0075434_101231090	Not Available	760	Open in IMG/M
3300009012\|Ga0066710_104340114	Not Available	530	Open in IMG/M
3300009098\|Ga0105245_10688063	Not Available	1055	Open in IMG/M
3300009098\|Ga0105245_11081119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	848	Open in IMG/M
3300009100\|Ga0075418_10255996	Not Available	1864	Open in IMG/M
3300009143\|Ga0099792_10968168	Not Available	567	Open in IMG/M
3300009148\|Ga0105243_10972327	Not Available	849	Open in IMG/M
3300009148\|Ga0105243_11937516	Not Available	623	Open in IMG/M
3300009156\|Ga0111538_10041290	Not Available	5941	Open in IMG/M
3300009162\|Ga0075423_11128328	Not Available	835	Open in IMG/M
3300009176\|Ga0105242_11675908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	671	Open in IMG/M
3300009177\|Ga0105248_12702525	Not Available	566	Open in IMG/M
3300009551\|Ga0105238_10436908	Not Available	1305	Open in IMG/M
3300010147\|Ga0126319_1230919	Not Available	1418	Open in IMG/M
3300010152\|Ga0126318_10325149	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300010371\|Ga0134125_11266670	Not Available	805	Open in IMG/M
3300010373\|Ga0134128_10202334	Not Available	2235	Open in IMG/M
3300010373\|Ga0134128_11101753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	877	Open in IMG/M
3300010373\|Ga0134128_12717674	Not Available	545	Open in IMG/M
3300011003\|Ga0138514_100111302	Not Available	598	Open in IMG/M
3300012212\|Ga0150985_102036753	Not Available	880	Open in IMG/M
3300012212\|Ga0150985_102258372	Not Available	1116	Open in IMG/M
3300012212\|Ga0150985_104684006	All Organisms → cellular organisms → Bacteria → Terrabacteria group	845	Open in IMG/M
3300012212\|Ga0150985_107116085	Not Available	567	Open in IMG/M
3300012212\|Ga0150985_107992600	Not Available	588	Open in IMG/M
3300012212\|Ga0150985_108253987	Not Available	880	Open in IMG/M
3300012469\|Ga0150984_101410909	Not Available	591	Open in IMG/M
3300012469\|Ga0150984_106444092	Not Available	739	Open in IMG/M
3300012891\|Ga0157305_10201496	Not Available	571	Open in IMG/M
3300012897\|Ga0157285_10054396	Not Available	986	Open in IMG/M
3300012924\|Ga0137413_11341244	Not Available	576	Open in IMG/M
3300012951\|Ga0164300_10389062	Not Available	762	Open in IMG/M
3300012951\|Ga0164300_10843978	Not Available	573	Open in IMG/M
3300012955\|Ga0164298_10001447	All Organisms → cellular organisms → Bacteria	7270	Open in IMG/M
3300012955\|Ga0164298_10145846	Not Available	1323	Open in IMG/M
3300012955\|Ga0164298_10187264	Not Available	1198	Open in IMG/M
3300012958\|Ga0164299_10312065	Not Available	972	Open in IMG/M
3300012960\|Ga0164301_10893987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	688	Open in IMG/M
3300012960\|Ga0164301_10990044	Not Available	660	Open in IMG/M
3300012960\|Ga0164301_11035020	Not Available	648	Open in IMG/M
3300012984\|Ga0164309_10070113	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2111	Open in IMG/M
3300012985\|Ga0164308_11416539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	635	Open in IMG/M
3300012986\|Ga0164304_10545073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	856	Open in IMG/M
3300012986\|Ga0164304_10780566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300012987\|Ga0164307_10257978	Not Available	1221	Open in IMG/M
3300012987\|Ga0164307_10511366	Not Available	909	Open in IMG/M
3300012988\|Ga0164306_11120189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300012988\|Ga0164306_12021692	Not Available	501	Open in IMG/M
3300012989\|Ga0164305_10185087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1450	Open in IMG/M
3300013307\|Ga0157372_12708782	Not Available	569	Open in IMG/M
3300013772\|Ga0120158_10342054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	707	Open in IMG/M
3300014497\|Ga0182008_10103463	All Organisms → cellular organisms → Bacteria	1408	Open in IMG/M
3300014745\|Ga0157377_11365667	All Organisms → cellular organisms → Bacteria → Terrabacteria group	557	Open in IMG/M
3300014745\|Ga0157377_11377054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	555	Open in IMG/M
3300014969\|Ga0157376_11044242	Not Available	841	Open in IMG/M
3300015160\|Ga0167642_1031537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	860	Open in IMG/M
3300015372\|Ga0132256_103000281	Not Available	567	Open in IMG/M
3300018054\|Ga0184621_10165432	Not Available	796	Open in IMG/M
3300018431\|Ga0066655_10639071	Not Available	719	Open in IMG/M
3300020610\|Ga0154015_1117725	All Organisms → cellular organisms → Bacteria → Terrabacteria group	587	Open in IMG/M
3300022883\|Ga0247786_1063131	Not Available	764	Open in IMG/M
3300025898\|Ga0207692_10989173	Not Available	555	Open in IMG/M
3300025900\|Ga0207710_10155841	Not Available	1110	Open in IMG/M
3300025910\|Ga0207684_11232484	Not Available	618	Open in IMG/M
3300025911\|Ga0207654_10275611	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1136	Open in IMG/M
3300025912\|Ga0207707_10091047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2665	Open in IMG/M
3300025916\|Ga0207663_10284011	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1230	Open in IMG/M
3300025917\|Ga0207660_10084820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2335	Open in IMG/M
3300025918\|Ga0207662_11197809	Not Available	540	Open in IMG/M
3300025920\|Ga0207649_11406687	Not Available	552	Open in IMG/M
3300025927\|Ga0207687_10044568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3062	Open in IMG/M
3300025927\|Ga0207687_10063066	Not Available	2623	Open in IMG/M
3300025927\|Ga0207687_10117444	Not Available	1984	Open in IMG/M
3300025927\|Ga0207687_10305618	Not Available	1282	Open in IMG/M
3300025927\|Ga0207687_10599433	Not Available	928	Open in IMG/M
3300025931\|Ga0207644_10229956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1473	Open in IMG/M
3300025934\|Ga0207686_11105815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	646	Open in IMG/M
3300025944\|Ga0207661_10014236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5824	Open in IMG/M
3300025945\|Ga0207679_10350431	Not Available	1287	Open in IMG/M
3300026023\|Ga0207677_10096404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2164	Open in IMG/M
3300026075\|Ga0207708_11324498	Not Available	631	Open in IMG/M
3300026089\|Ga0207648_10045308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	3858	Open in IMG/M
3300026325\|Ga0209152_10121704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	993	Open in IMG/M
3300028718\|Ga0307307_10235931	Not Available	583	Open in IMG/M
3300028824\|Ga0307310_10026453	Not Available	2311	Open in IMG/M
3300031184\|Ga0307499_10243045	Not Available	572	Open in IMG/M
3300031226\|Ga0307497_10149764	Not Available	968	Open in IMG/M
3300031366\|Ga0307506_10055316	Not Available	1171	Open in IMG/M
3300031366\|Ga0307506_10057106	Not Available	1158	Open in IMG/M
3300031547\|Ga0310887_10751728	Not Available	609	Open in IMG/M
3300031740\|Ga0307468_102490575	Not Available	507	Open in IMG/M
3300031858\|Ga0310892_10081181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1718	Open in IMG/M
3300031938\|Ga0308175_101281772	Not Available	816	Open in IMG/M
3300031938\|Ga0308175_101420549	Not Available	774	Open in IMG/M
3300031938\|Ga0308175_102690056	Not Available	556	Open in IMG/M
3300031939\|Ga0308174_11905856	Not Available	511	Open in IMG/M
3300031944\|Ga0310884_10755545	Not Available	592	Open in IMG/M
3300032013\|Ga0310906_10160305	Not Available	1323	Open in IMG/M
3300034090\|Ga0326723_0109512	Not Available	1198	Open in IMG/M
3300034090\|Ga0326723_0125925	Not Available	1118	Open in IMG/M
3300034268\|Ga0372943_0090166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1786	Open in IMG/M
3300034268\|Ga0372943_0090913	All Organisms → cellular organisms → Bacteria	1779	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.25%
Host-Associated	Host-Associated	28.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.38%
Plants	Host-Associated → Plants	28.75%
Aquatic	Environmental → Aquatic	1.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.88%
Freshwater	Environmental → Aquatic → Freshwater	1.25%
Peat	Environmental → Terrestrial → Peat	1.25%
Sediment	Environmental → Aquatic → Sediment	0.62%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.62%
Roots	Host-Associated → Plants → Roots	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.38%
Loam	Environmental → Terrestrial → Soil → Loam	23.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.75%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.25%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.62%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.38%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.00%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.88%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.25%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.25%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.62%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.62%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.62%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	8.75%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	7.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.38%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.12%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.75%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.88%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.25%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.25%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.25%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.25%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.25%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.62%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.62%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.62%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908009	Soil microbial communities from sample at FACE Site Metagenome WIR_Amb2	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015160	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7C, Adjacent to main proglacial river, mid transect (Watson river))	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FWIRA_01505340	2124908009	Soil	VAIFDVPQRFSQKWVHDKVPRMDSTEFHAMFHEAATRGWDEDELRQLARMWAEESGRPDASTG
C688J35102_1198635082	3300002568	Soil	MAIFEVPRRFSRKWVADKVPRMDSTEFHAMFHEAATRGWSESELRQLARMWAADAGADALADDHVGH*
C688J35102_1200963202	3300002568	Soil	VAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWAQESGPPDAPAEPGR*
C688J35102_1202858702	3300002568	Soil	MAASAMAIFDVPQRFSRKWVGDHVPGMDSTEFHAMFHEAATRGWSEDELRQLARMWAADGKDAQLNG*
C688J35102_1205044092	3300002568	Soil	MAIFDVPKRFSRQWVQRKVPQMDSTEFHAMFHEAATRGWDEHELRQLARMWADESGSAELDGRD*
C688J35102_1205158952	3300002568	Soil	VAIFDVPQRFSRKWVKEKVPRMDSTEFHAMFHEAAARGWNEEELRELARMWAAERPGQAA
C688J35102_1209860102	3300002568	Soil	MAIFDVPQRFSRKWVQEKVPRMDSTEFHAMFHEAAARGWDEDELRQLARMWSDSEGAGSPSGQRSQGSP*
Ga0062593_1000410515	3300004114	Soil	MAIFDVPQRFSRKWVAEKVPRMDSTEFHAMFHEAAARGWNEDELRQLARMWAADPTDSAPHTGQ*
Ga0062593_1006195102	3300004114	Soil	VAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWNEEELRQLARMWSEESGPAESSG*
Ga0063455_1014912441	3300004153	Soil	MAIFDVPQRFSRKWVADKVPRMDSTEFHAMFHEAATRGWSESELRQLARMWAADAGADALADDHVGH*
Ga0062595_1000780013	3300004479	Soil	MAIFDVPKRFSRQWVQRKVPQMDSTEFHAMFHEAATRGWDEGELRQLARMWADESGSAELEGGSER*
Ga0062595_1000784732	3300004479	Soil	MAIFDVPQRFSRKWVAEKVPRMDSTEFHAMFHEAAARGWNEDELRQLARMWAA
Ga0062595_1002650952	3300004479	Soil	MAIFNVPQRFSRKWVQEKVPRMDSTEFHAMFHEAATRGWDEEELRELARMWAAESAAAAAPGQSA*
Ga0062595_1008345892	3300004479	Soil	MAIFDVPKRFSRQWVQRKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWADESGSAEAKADSG*
Ga0062591_1003768551	3300004643	Soil	MPIFDVPQRFSRKWVSEKVPTMDSTEFHAMFHEAAARGWDEDELRQLARMWAN*
Ga0062591_1005963501	3300004643	Soil	MAIFDVPQRFSRKWVAEKVPRMDSTEFHAMFHEAAARGWNEDELRQLARMWAADRTDGAPHPGQ*
Ga0062591_1006473082	3300004643	Soil	VAIFDVPKRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWADTSGSIPEGAERAGRG*
Ga0062594_1002439402	3300005093	Soil	MAIFNVPQRFSRKWVQEKVPRMDSTEFHAMFHEAAARGWDEHELRQLARMWAAEHQAGEHVGPSA*
Ga0062594_1006603722	3300005093	Soil	VPIFDVPKRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDEDELRELARMWAETSGGEARSTPDRG*
Ga0062594_1010863282	3300005093	Soil	MAIFDVPKRFSRQWVQRKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWADESGSAEPKTDSG*
Ga0062594_1022027881	3300005093	Soil	VAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWSEESGASTESPS*
Ga0062594_1032853751	3300005093	Soil	MAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWSEESGRPDASSG*
Ga0066819_10174171	3300005148	Soil	VAIFDVPQRFSQKWVHDKVPMMDSTEFHAMFHEAATRGWDEDELRQLARMWAEESGRPDASTG*
Ga0070683_1000259382	3300005329	Corn Rhizosphere	MAIFDVPRRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWAETSGVPIAQGSDPPT*
Ga0070683_1004587071	3300005329	Corn Rhizosphere	MAIFDVPKRFSRQWVARKVPQMDSTEFHAMFHEAATRGWNEDELRQLARMWADTSGSTPESAERAGRT*
Ga0070691_102259621	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VAIFDVPKRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDENELRQLARMWAETSGAPSKVSDEDRT*
Ga0070687_1009086291	3300005343	Switchgrass Rhizosphere	MAIFDVPKRFSRQWVERKVPQMDSTEFHAMFHEAATRGWDEDELRQLALMWAQRGGSADPSRS*
Ga0070688_1015948581	3300005365	Switchgrass Rhizosphere	FSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWSEESGRPDASSG*
Ga0070667_1006420931	3300005367	Switchgrass Rhizosphere	MAIFDVPKRFSRQWVERKVPQMDSTEFHAMFHEAATRGWDEDELRQLALMWAQRGGSADPSRA*
Ga0070709_101713942	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWAEESRTAESTG*
Ga0070714_1005569342	3300005435	Agricultural Soil	MAIFNVPQRFSRKWVQEKVPTMDSTEFHAMFHEAAARGWNEDELRELAAMWAEHGPGPPTNG*
Ga0070710_108125811	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VAAEFDVPQRFSQNWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWAEESGASP
Ga0070711_1003257732	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VAAEFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWAEESGASPGTSSG*
Ga0070711_1008740382	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAIFNVPQRFSRKWVQEKVPTMDSTEFHAMFHEAAARGWNEAELRELAAMWAEHGPGPPTNG*
Ga0070705_1013055781	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	AIFDVPKRFSRQWVQRKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWADESGSVEPQGESR*
Ga0070700_1002184181	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	KWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWSEESGRPDASSG*
Ga0070708_1004590991	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VAIFDVPQRFSQKWVHDKVPTMDSTEFHARFHEAATRGWDEDELRQLARMWAEESAPTGASPG*
Ga0070681_100378882	3300005458	Corn Rhizosphere	MAIFNVPQRFSRKWVQEKVPRMDSTEFHAMFHEAATRGWDEEELRELARMWAAESAAAAATGQSA*
Ga0068867_1019839751	3300005459	Miscanthus Rhizosphere	MPIFDVPQRFSRKWVSEKVPTMDSTEFHAMFHEAATRGWDEDELRELARMWAAEGSASGA
Ga0070685_100789892	3300005466	Switchgrass Rhizosphere	MPIFDVPRRFSRQWVERKVPQMDSTEFHAMFHEAATRGWDENELRQLARMWAETSGPRAESSD*
Ga0073909_101743401	3300005526	Surface Soil	IRWSMAIFDVPKRFSRQWVERKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWAEESGPAEPTG*
Ga0070684_1004755082	3300005535	Corn Rhizosphere	MAIFDVPQRFSQKWVQDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWSEESGRPDASSG*
Ga0070696_1008763351	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MAIFDVPQRFSRKWVAEKVPRMDSTEFHAMFHEAAARGWNEDELRQLARMWAADR
Ga0070693_1005176812	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VAIFDVPKRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDENELRQLARMWAETSGAPSKVSDDDRA*
Ga0070704_1007053851	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	QRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWSEESGRPDASSG*
Ga0068854_1021366682	3300005578	Corn Rhizosphere	MAIFDVPRRFSAKWVAEKVPTMDSTEFHAMFYEAAARGWDEDELRELARMRAEDGSQRQR
Ga0068860_1005119581	3300005843	Switchgrass Rhizosphere	MAIFDVPQRFSRKWVAEKVPRMDSTEFHAMFHEAAARGWNEDELRQLARMWAADRTDSAPHPGQ*
Ga0070715_101438942	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWSEESGRPEASPS*
Ga0070712_1009828482	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MVRAMAIFDVPQRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWAETSGAADGRSTPP*
Ga0070712_1011848921	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLGVAIFDVPQRFSRQWVQRKVPQMDSTEFHAMFHEAATRGWDEDELRELARMWAVESGSDDQAARSPEQEL*
Ga0097621_1021792421	3300006237	Miscanthus Rhizosphere	MAIFNVPQRFSRKWVQEKVPRMDSTEFHAMFHEAAARGWDEHELRQLARMWAAEHQAGERVGPSA*
Ga0074055_114719462	3300006573	Soil	VAIFDVPQRFSQKWVHDKVPRMDSTEFHAMFHEAATRGWDEDELRQLARMWAEESGRPDASTG*
Ga0074055_115066312	3300006573	Soil	VAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWSEESGAPAASPG*
Ga0074048_118200692	3300006581	Soil	VAIFDVPQRFSQKWDHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWAEESGRPDASTG*
Ga0066658_103937141	3300006794	Soil	VAIFNVPQRFSRKWVQEKVPRMDSTEFHAMFHEAAARGWDEDELRQLARMWAAQGSATEADGESA*
Ga0075434_1004590033	3300006871	Populus Rhizosphere	MPIFDVPRRFSRQWVERKVPQMDSTEFHAMFHEAATRGWDENELRQLARMWAE
Ga0075434_1005920842	3300006871	Populus Rhizosphere	MPIFDVPRRFSRQWVERKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWAETSGQAQRPN*
Ga0075434_1012310902	3300006871	Populus Rhizosphere	VAIFDVPKRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWAETSGAKPDSTSGSR*
Ga0066710_1043401141	3300009012	Grasslands Soil	VALFNVPERFSRKWVATHVPRMDSTEFHAMFHEAATRGWSEYELRQLARMWADSVDETGRRGA
Ga0105245_106880631	3300009098	Miscanthus Rhizosphere	VTIFNVPQRFSQKWVSEKVPAMDSTEFHAMFHEAATRGWNEDELRQLARMWAEQGPTTSAN*
Ga0105245_110811192	3300009098	Miscanthus Rhizosphere	FSRKWVQEKVPRMDSTEFHAMFHEAATRGWDEDELRELARMWAAEGSASGATGESA*
Ga0075418_102559961	3300009100	Populus Rhizosphere	LTVMAIFDVPQRFSRKWVAEKVPRMDSTEFHAMFHEAAARGWDEDELRQLARMWAN*
Ga0099792_109681681	3300009143	Vadose Zone Soil	MAIFDVPKRFSRQWVRRKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWAEESSSSELRPTKPPVGE*
Ga0105243_109723272	3300009148	Miscanthus Rhizosphere	VAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWSEESGRPDASSG*
Ga0105243_119375162	3300009148	Miscanthus Rhizosphere	MVRTMAIFDVPQRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWAETSGAADGRSTPP*
Ga0111538_100412903	3300009156	Populus Rhizosphere	MPIFDVPQRFSRKWVSEKVPTMDSTEFHAMFHEAAARGWDEDELRQLARIWAN*
Ga0075423_111283282	3300009162	Populus Rhizosphere	MAIFDVPQRFSRKWVAEKVPTMDSTEFHAMFHEAAARGWNEDELRQLARMWAADAGDPSPSNAGR*
Ga0105242_114467601	3300009176	Miscanthus Rhizosphere	RFSRQWVERKVPQMDSTEFHAMFHEAATRGWDENELRQLARMWAETSGPRAESSD*
Ga0105242_116759082	3300009176	Miscanthus Rhizosphere	FDVPKRFSRQWVQRKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWADESGSAEPKTDSG*
Ga0105248_127025252	3300009177	Switchgrass Rhizosphere	MAIFNVPQRFSRKWVQEKVPRMDSTEFHAMFHEAAARGWDEHELRQLARMWAAEHQAGERVGRSA*
Ga0105238_104369083	3300009551	Corn Rhizosphere	VAIFDVPKRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDENELRQLARMWAETSGAQSKVSDDDRA*
Ga0126319_12309192	3300010147	Soil	MAIFDVPRRFSRQWVERKVPQMDSTEFHAMFHEAATRGWDEDELRELAQMWAADGGSKEPAGGAS*
Ga0126318_103251492	3300010152	Soil	FSRKWVKEKVPRMDSTEFHAMFHEAAARGWDEGELRQLARMWAAERPGREVLTPDGGEA*
Ga0134125_112666703	3300010371	Terrestrial Soil	VAIFNVPQRFSRKWVQEKVPRMDSTEFHAMFHEAATRGWDEDEVRELARMWAAEGSATAPTGESA*
Ga0134128_102023341	3300010373	Terrestrial Soil	VAIFDVPKRFSRQWVERKVPQMDSTEFHAMFHEAATRGWDEDELRQLALMWAQRGGSADPSRS*
Ga0134128_111017533	3300010373	Terrestrial Soil	MAIFNVPQRFSRKWVQEKVPRMDSTEFHAMFHEAATRGWDEEELRELARMWAAKSAAAAAPGQSA*
Ga0134128_127176741	3300010373	Terrestrial Soil	VAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMLFEESAASTESPS*
Ga0138514_1001113021	3300011003	Soil	MAIFDVPKRFSRQWVARKVPQMDSTEFHAMFHEAAARGWNEDELRELAKMWAETSGAEGAR*
Ga0150985_1020367531	3300012212	Avena Fatua Rhizosphere	VAVFDVPERFSQKWVHDKVPTMDSTEFLAMFHEAATRGWDEEELRQLARMWAEESGAPRAAHGEPRR*
Ga0150985_1022583722	3300012212	Avena Fatua Rhizosphere	MAIFDVPQRFSRKWVQKKVPRMDSTEFHAMFHEAAARGWDEDELRQLARMWSDSEGAGSPSGQRSQGSP*
Ga0150985_1046840062	3300012212	Avena Fatua Rhizosphere	MAIFDVPKRFSRQWVRRKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWADESGSTELKSSSD*
Ga0150985_1071160851	3300012212	Avena Fatua Rhizosphere	MAIFDVPKRFSRQWVQRKVPEMDSTEFHAMFHEAATRGWDEDELRQLARMWAEDGGSKESASDAR*
Ga0150985_1079926002	3300012212	Avena Fatua Rhizosphere	MAIFDVPRRFSQKWVAEKVPTMDSTEFHAMFHEAATRGWDDGELRQLARMWAEDSGQEPAAGP*
Ga0150985_1082539872	3300012212	Avena Fatua Rhizosphere	MAIFDVPKRFSRRWVERKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWADESGPAGGKGAPER*
Ga0150984_1014109092	3300012469	Avena Fatua Rhizosphere	MAIFDVPQRFSRQWVQRKVPEMDSTEFHAMFHEAAARGWSEEELRELARMWVADGSPSDAGS*
Ga0150984_1064440922	3300012469	Avena Fatua Rhizosphere	FDVPQRFSQKWVHDKVPTMDSTEFLAIFHEAATRGWDEEELRQLARTWAEESGAPRAAHGEPRR*
Ga0157305_102014962	3300012891	Soil	MAIFDVPQRFSRKWVAEKVPRMDSTEFHAMFHEAAARGWNEDELRQLARMWAADPTDSAPHPGQ*
Ga0157285_100543961	3300012897	Soil	MPIFDVPQRFSRKWVAEKVPTMDSTEFHAMFHEAAARGWNEDELRQLARMWAADRTDGAPHPGQ*
Ga0137413_113412441	3300012924	Vadose Zone Soil	MAIFDVPQRFSQKWVRDKVPTMDSAEFHVMFLGAVARGWDEGELRQRARMWSEQ
Ga0164300_103890622	3300012951	Soil	SMAIFDVPKRFSQHWVERIVPQMDSTKFHAMFHEAATRGWDENELRQFARMWADGSGSAELTGPSTR*
Ga0164300_108439781	3300012951	Soil	MVRAMAIFDVPQRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWAETSGVADGRSTAP*
Ga0164298_1000144712	3300012955	Soil	VAIFDVPQRFSQKWVHDKVPRMDSTEFHAMCHEAATRGWDEDELRQLARMWAEESGRPDASTG*
Ga0164298_101458463	3300012955	Soil	MAIFDVPKRFSQQWVERIVPQMDSTKFHAMFHEAATRGWDENELRQFARMWADGSGSAELTGPSTR*
Ga0164298_101872641	3300012955	Soil	VAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLAWMWAEEGGPSDASRG*
Ga0164299_103120651	3300012958	Soil	MAIFDVPKRFSQQWVERIVAQMDSTKFHAMFHEAATRGWDENELRQFARMWADGSGSAELTGPSTR*
Ga0164301_108939871	3300012960	Soil	SMAIFDVPKRFSRQWVQRKVPQMDSTEFHAMFHEAATRGWDENELRQLARMWAETSGAPSKVRDDDRA*
Ga0164301_109900442	3300012960	Soil	VAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWSEESGSPS*
Ga0164301_110350202	3300012960	Soil	VAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWSEESGASSESPS*
Ga0164309_100701131	3300012984	Soil	VAIFDVPQRFSQKWVHDKVPRMDSTEFHAMFHEAATRGWDEDELRQLARMWAEESGRP
Ga0164308_114165393	3300012985	Soil	VPQRFSRKWVQEKVPRMDSTEFHAMFHEAATRGWDEEELRELARMWAAESAAAAATGQSA
Ga0164304_105450732	3300012986	Soil	MAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFPEAATRGWDEDELRQLARMWAEE
Ga0164304_107805661	3300012986	Soil	MAIFDVPKRFSRQWVQRKVPQMDSTEFHAMFHEAATRGWDENELRQLARMWADESGSAELNDQ
Ga0164307_102579783	3300012987	Soil	VAIFDVPQRFSQKWVHDKVPMMDSTEFHAMFHEAATRGWDEDELRQLARMWAEESGRPDASAG*
Ga0164307_105113662	3300012987	Soil	MAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWAEESGAAPGTSSG*
Ga0164306_111201892	3300012988	Soil	MAIFDVPKRFSRQWVERKVPQMDSTEFHAMFHEAATRGWDEDELRQLALMWAQRGG
Ga0164306_120216921	3300012988	Soil	MNPESRFVDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWSEESGSAEPAG*
Ga0164305_101850871	3300012989	Soil	MVRTMAIFDVPQRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWAETSGAADG
Ga0157372_127087821	3300013307	Corn Rhizosphere	VPIFDVPKRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDEDELRELARMWAETSGGEARSTPDLG*
Ga0120158_103420542	3300013772	Permafrost	VAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWSEESGAPNR
Ga0182008_101034632	3300014497	Rhizosphere	VAIFDVPKRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWAENSGAARERTDQPE*
Ga0157377_113656671	3300014745	Miscanthus Rhizosphere	MAIFNVPQRFSRKWVQEKVPRMDSTEFHAMFHEAATRGWDEGELRELARMWAAEGSATAPTGEST
Ga0157377_113770542	3300014745	Miscanthus Rhizosphere	MAIFDVPQRFSRKWVAEKVPTMDSTEFHAMFHEAATRGWDEDELRELARMWAAEGSASGATGESA*
Ga0157376_110442422	3300014969	Miscanthus Rhizosphere	VAIFNVPQRFSRKWVQEKVPRMDSTEFHAMFHEAATRGWDEEELRELARMWAAESAAAAA
Ga0167642_10315371	3300015160	Glacier Forefield Soil	MAIFDVPKRFSQQWVQRKVPQMDSTEFHAMFHEAAARGWDEDELRQLARMWADESGPAKST*
Ga0132256_1030002812	3300015372	Arabidopsis Rhizosphere	MAIFDVPKRFSRQWVQRKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWADESGSAELEGASR*
Ga0184621_101654322	3300018054	Groundwater Sediment	MAIFDVPKRFSRQWVQRKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWADESGPADLKGAAER
Ga0066655_106390711	3300018431	Grasslands Soil	MAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAAPRGWDEDELRQLARMRSEESGADLAPPS
Ga0154015_11177251	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	VAIFDVPKRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDENELRQLARMWAETSGAQSKVSDDDRA
Ga0247786_10631312	3300022883	Soil	LTVMAIFDVPQRFSRKWVAEKVPRMDSTEFHAMFHEAAARGWNEDELRQLARMWAADPTD
Ga0207692_109891732	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MAIFNVPQRFSRKWVQEKVPTMDSTEFHAMFHEAAARGWNEAELRELAAMWAEH
Ga0207710_101558411	3300025900	Switchgrass Rhizosphere	MAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWSEESGRPDASSG
Ga0207684_112324842	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VAIFDVPKRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWSEESGASAASPG
Ga0207654_102756111	3300025911	Corn Rhizosphere	MAIFNVPQRFSRKWVQEKVPRMDSTEFHAMFHEAAARGWDEHELRQLARMWAAEHQAGERVGPSA
Ga0207707_100910475	3300025912	Corn Rhizosphere	MAIFNVPQRFSRKWVQEKVPRMDSTEFHAMFHEAATRGWDEEELRELARMWAAESAAAAATGQSA
Ga0207663_102840112	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VAAEFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWAEESGASPGTSSG
Ga0207660_100848204	3300025917	Corn Rhizosphere	MAIFNVPQRFSRKWVQEKVPRMDSTEFHAMFHEAATRGWDEEELRELARMWAAESAAAAAPGQSA
Ga0207662_111978091	3300025918	Switchgrass Rhizosphere	SPRVAIFDVPKRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDENELRQLARMWAETSGAPSKVSDDDRA
Ga0207649_114066871	3300025920	Corn Rhizosphere	VPIFDVPKRFSRQWVARKVPQMDSTEFHAMLHEAATRGWDEDELRELARMWAET
Ga0207687_100445681	3300025927	Miscanthus Rhizosphere	MAIFNVPQRFSRKWVQEKVPRMDSTEFHAMFHEAAARGWDEHELRQLARMWAAEHQAGEHVGPSA
Ga0207687_100630662	3300025927	Miscanthus Rhizosphere	MAIFDVPQRFSRKWVAEKVPRMDSTEFHAMFHEAAARGWNEDELRQLARMWAADPTDSAPHTGQ
Ga0207687_101174442	3300025927	Miscanthus Rhizosphere	MAIFDVPKRFSRQWVARKVPQMDSTEFHAMFHEAATRGWNEDELRQLARMWADTSGSTPESAERAGRT
Ga0207687_103056182	3300025927	Miscanthus Rhizosphere	MPIFDVPRRFSRQWVERKVPQMDSTEFHAMFHEAATRGWDENELRQLARMWAETSGPRAESSD
Ga0207687_105994332	3300025927	Miscanthus Rhizosphere	MAIFDVPKRFSRQWVQRKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWADESGSAEPKTDSG
Ga0207644_102299561	3300025931	Switchgrass Rhizosphere	MAIFDVPKRFSRQWVERKVPQMDSTEFHAMFHEAATRGWDEDELRQLALMWAQRGGSADPSR
Ga0207686_111058152	3300025934	Miscanthus Rhizosphere	MAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWAEESGRSGESR
Ga0207661_100142363	3300025944	Corn Rhizosphere	VAIFDVPKRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWADTSGSIPEGAERAGRG
Ga0207679_103504312	3300025945	Corn Rhizosphere	MAIFDVPRRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWAETSGVPIAQGSDPPT
Ga0207677_100964044	3300026023	Miscanthus Rhizosphere	VAIFNVPQRFSRKWVQEKVPRMDSTEFHAMFHEAAARGWDEHELRQLARMWAAEHQAGEHVGPSA
Ga0207708_113244981	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MVRTMAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWSEESGRPDASSG
Ga0207648_100453087	3300026089	Miscanthus Rhizosphere	MPIFDVPQRFSRKWVSEKVPTMDSTEFHAMFHEAATRGWDEDELRELARMWAAEGSASGTRGGATHDTRDH
Ga0209152_101217042	3300026325	Soil	VAIFNVPQRFSRKWVQEKVPRMDSTEFHAMFHEAAARGWDEDELRQLARMWAAQGSATEADGESA
Ga0307307_102359311	3300028718	Soil	MAIFDVPKRFSRQWVQRKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWADESGPAELKGASER
Ga0307310_100264531	3300028824	Soil	SGMAIFDVPKRFSRQWVQRKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWADESGPAELKGASER
Ga0307499_102430452	3300031184	Soil	MAIFDVPKRFSRQWVQRKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWADESGSAEPKADS
Ga0307497_101497641	3300031226	Soil	MAIFDVPKRFSRQWVQRKVPQMDSTEFHAMFHEAATRGWDDDELRQLARMWADESGSAELKGASR
Ga0307506_100553162	3300031366	Soil	MAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWAEESAAAERHT
Ga0307506_100571063	3300031366	Soil	MAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWSEESGASPGTSSG
Ga0310887_107517281	3300031547	Soil	MPIFDVPQRFSRKWVSEKVPTMDSTEFHAMFHEAAARGWDEDELRQLARMWA
Ga0307468_1024905752	3300031740	Hardwood Forest Soil	MAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWAEESGTTEPAG
Ga0310892_100811812	3300031858	Soil	MPIFDVPQRFSRKWVSEKVPTMDSTEFHAMFHEAAARGWDEDELRQLARMWAN
Ga0308175_1012817723	3300031938	Soil	MAIFDVPQRFSRKWVSEQVPTMDSTEFHAMFHEAAARGWSEDELRQLARMWVEESVPSAA
Ga0308175_1014205492	3300031938	Soil	VAIFDVPKRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWAENSAAARERTHQPE
Ga0308175_1026900561	3300031938	Soil	VTAAASGYGSGVAIFDVPQRFSRKWVKEKVPRMDSTEFHAMFHEAAARGWNEKELRELARMWAAERPGQAA
Ga0308174_119058562	3300031939	Soil	VAIFDVPQRFSQKWVHDKVPTMDSTEFHAMFHEAATRGWDEDELRQLARMWAQESGPPDAPAEPGR
Ga0310884_107555451	3300031944	Soil	MAIFDVPQRFSRKWVAEKVPRMDSTEFHAMFHEAAARGWNEDELRQLARMWAADPTDSAPHT
Ga0310906_101603052	3300032013	Soil	MAIFDVPQRFSRKWVAEKVPRMDSTEFHAMFHEAAARGWNEDELRQLARMWAADRTDSAPHTGQ
Ga0326723_0109512_11_214	3300034090	Peat Soil	MAIFDVPTRFSRQWVERKVPQMDSTEFHAMFHEAATRGWDEAELRQLARMWADQSGEPGEARGGPGQ
Ga0326723_0125925_240_449	3300034090	Peat Soil	MAIFDVPQRFSRQWVARKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWAETSGSAHHDGPTGTSRS
Ga0372943_0090166_539_736	3300034268	Soil	MAIFDVPKRFSRQWVQRKVPVMDSTEFHAMFHEAATRGWDENELRQLARMWADDGGAKDRDRPVG
Ga0372943_0090913_504_704	3300034268	Soil	MAIFDVPKRFSRRWVERKVPQMDSTEFHAMFHEAATRGWDEDELRQLARMWADESGPADGKGAPER

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041472

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences