Metagenome / Metatranscriptome Family F041471

Basic Information
Family ID	F041471
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	48 residues
Representative Sequence	LKNRIFFKLLAVFLIVIAATAAILDVMIGSAWEASLRAEIERNLTQK
Number of Associated Samples	141
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	79.11 %
% of genes near scaffold ends (potentially truncated)	97.50 %
% of genes from short scaffolds (< 2000 bps)	88.12 %
Associated GOLD sequencing projects	133
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Most Common Taxonomy
Group	Unclassified (65.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.625 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.500 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 60.00% β-sheet: 0.00% Coil/Unstructured: 40.00%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF00486	Trans_reg_C	88.75
PF01968	Hydantoinase_A	2.50
PF05378	Hydant_A_N	1.25
PF16870	OxoGdeHyase_C	1.25
PF00672	HAMP	0.62
PF01895	PhoU	0.62
PF09107	SelB-wing_3	0.62
PF13533	Biotin_lipoyl_2	0.62
PF01915	Glyco_hydro_3_C	0.62
PF01738	DLH	0.62
PF01408	GFO_IDH_MocA	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG0145	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	Amino acid transport and metabolism [E]	2.50
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.62

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.00 %
All Organisms	root	All Organisms	35.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.00 %
cellular organisms	root	All Organisms → cellular organisms	35.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	27.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.00 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	23.75 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.00 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	23.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.00 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	23.75 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.00 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	16.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.00 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.25 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10185587	Not Available	836	Open in IMG/M
3300001546\|JGI12659J15293_10152520	Not Available	505	Open in IMG/M
3300001593\|JGI12635J15846_10290990	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1026	Open in IMG/M
3300002245\|JGIcombinedJ26739_100755849	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	851	Open in IMG/M
3300003505\|JGIcombinedJ51221_10032197	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1917	Open in IMG/M
3300004080\|Ga0062385_10123077	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1297	Open in IMG/M
3300004080\|Ga0062385_10337203	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	879	Open in IMG/M
3300004091\|Ga0062387_100581046	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	799	Open in IMG/M
3300004114\|Ga0062593_100177980	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1660	Open in IMG/M
3300005148\|Ga0066819_1017897	Not Available	571	Open in IMG/M
3300005187\|Ga0066675_11210131	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	560	Open in IMG/M
3300005329\|Ga0070683_100290369	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1555	Open in IMG/M
3300005435\|Ga0070714_100556004	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1099	Open in IMG/M
3300005436\|Ga0070713_102462306	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	503	Open in IMG/M
3300005534\|Ga0070735_10361357	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	871	Open in IMG/M
3300005538\|Ga0070731_10201056	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300005538\|Ga0070731_10781085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	634	Open in IMG/M
3300005541\|Ga0070733_10056066	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2470	Open in IMG/M
3300005542\|Ga0070732_10640409	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	646	Open in IMG/M
3300005564\|Ga0070664_100597781	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1023	Open in IMG/M
3300005602\|Ga0070762_11082151	Not Available	552	Open in IMG/M
3300005607\|Ga0070740_10080969	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1520	Open in IMG/M
3300005921\|Ga0070766_10624750	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	725	Open in IMG/M
3300005995\|Ga0066790_10028854	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2423	Open in IMG/M
3300006028\|Ga0070717_11451329	Not Available	623	Open in IMG/M
3300006052\|Ga0075029_100025687	All Organisms → cellular organisms → Bacteria → Acidobacteria	3320	Open in IMG/M
3300006052\|Ga0075029_100392217	Not Available	901	Open in IMG/M
3300006059\|Ga0075017_100098240	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2036	Open in IMG/M
3300006163\|Ga0070715_10163480	Not Available	1102	Open in IMG/M
3300006175\|Ga0070712_101303421	Not Available	633	Open in IMG/M
3300006914\|Ga0075436_100872815	Not Available	672	Open in IMG/M
3300009522\|Ga0116218_1116141	Not Available	1218	Open in IMG/M
3300009524\|Ga0116225_1206617	Not Available	887	Open in IMG/M
3300009792\|Ga0126374_11713577	Not Available	523	Open in IMG/M
3300010360\|Ga0126372_10330060	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300010376\|Ga0126381_100390900	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1934	Open in IMG/M
3300010376\|Ga0126381_100833135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1325	Open in IMG/M
3300010376\|Ga0126381_105071595	Not Available	504	Open in IMG/M
3300010379\|Ga0136449_103100563	Not Available	645	Open in IMG/M
3300010379\|Ga0136449_104514984	Not Available	511	Open in IMG/M
3300010398\|Ga0126383_10487183	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300010401\|Ga0134121_13302672	Not Available	500	Open in IMG/M
3300011076\|Ga0138574_1128467	Not Available	519	Open in IMG/M
3300011269\|Ga0137392_10389607	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300011270\|Ga0137391_10013342	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6634	Open in IMG/M
3300012212\|Ga0150985_105227464	Not Available	661	Open in IMG/M
3300012469\|Ga0150984_110662992	Not Available	855	Open in IMG/M
3300012986\|Ga0164304_11631995	Not Available	538	Open in IMG/M
3300012989\|Ga0164305_10622112	Not Available	871	Open in IMG/M
3300013100\|Ga0157373_11352760	Not Available	540	Open in IMG/M
3300013296\|Ga0157374_11550889	Not Available	686	Open in IMG/M
3300013307\|Ga0157372_10019629	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7285	Open in IMG/M
3300014164\|Ga0181532_10422652	Not Available	738	Open in IMG/M
3300014169\|Ga0181531_10531738	Not Available	727	Open in IMG/M
3300015373\|Ga0132257_102903106	Not Available	625	Open in IMG/M
3300016294\|Ga0182041_11796554	Not Available	568	Open in IMG/M
3300016404\|Ga0182037_10353807	Not Available	1197	Open in IMG/M
3300017823\|Ga0187818_10485012	Not Available	554	Open in IMG/M
3300017924\|Ga0187820_1162412	Not Available	679	Open in IMG/M
3300017943\|Ga0187819_10671210	Not Available	585	Open in IMG/M
3300017975\|Ga0187782_10228846	Not Available	1395	Open in IMG/M
3300018022\|Ga0187864_10123289	Not Available	1316	Open in IMG/M
3300018030\|Ga0187869_10549528	Not Available	548	Open in IMG/M
3300018038\|Ga0187855_10555192	Not Available	669	Open in IMG/M
3300018044\|Ga0187890_10162111	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300018062\|Ga0187784_10271483	All Organisms → cellular organisms → Bacteria	1379	Open in IMG/M
3300018085\|Ga0187772_11104947	Not Available	582	Open in IMG/M
3300018482\|Ga0066669_12155303	Not Available	527	Open in IMG/M
3300020021\|Ga0193726_1231494	Not Available	760	Open in IMG/M
3300020579\|Ga0210407_10122076	Not Available	1994	Open in IMG/M
3300021170\|Ga0210400_11520988	Not Available	530	Open in IMG/M
3300021171\|Ga0210405_10235842	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1448	Open in IMG/M
3300021401\|Ga0210393_11380334	Not Available	563	Open in IMG/M
3300021402\|Ga0210385_10306773	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300021402\|Ga0210385_11107575	Not Available	608	Open in IMG/M
3300021406\|Ga0210386_10103133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2341	Open in IMG/M
3300021407\|Ga0210383_11401485	Not Available	581	Open in IMG/M
3300021420\|Ga0210394_11762801	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300021433\|Ga0210391_10714069	Not Available	785	Open in IMG/M
3300021474\|Ga0210390_10001745	All Organisms → cellular organisms → Bacteria	20091	Open in IMG/M
3300021475\|Ga0210392_11425764	Not Available	518	Open in IMG/M
3300021476\|Ga0187846_10336674	Not Available	623	Open in IMG/M
3300021477\|Ga0210398_10198480	Not Available	1635	Open in IMG/M
3300021478\|Ga0210402_10490816	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300021478\|Ga0210402_11864202	Not Available	527	Open in IMG/M
3300021478\|Ga0210402_11954361	Not Available	512	Open in IMG/M
3300021479\|Ga0210410_10023804	All Organisms → cellular organisms → Bacteria	5289	Open in IMG/M
3300021861\|Ga0213853_11280439	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1401	Open in IMG/M
3300022522\|Ga0242659_1038959	Not Available	806	Open in IMG/M
3300022528\|Ga0242669_1029965	Not Available	845	Open in IMG/M
3300022531\|Ga0242660_1137668	Not Available	629	Open in IMG/M
3300022557\|Ga0212123_10327879	Not Available	1057	Open in IMG/M
3300022712\|Ga0242653_1027906	Not Available	829	Open in IMG/M
3300022731\|Ga0224563_1018757	Not Available	604	Open in IMG/M
3300025905\|Ga0207685_10813242	Not Available	515	Open in IMG/M
3300025915\|Ga0207693_10471646	Not Available	980	Open in IMG/M
3300025916\|Ga0207663_11653079	Not Available	515	Open in IMG/M
3300025921\|Ga0207652_10359775	Not Available	1314	Open in IMG/M
3300025928\|Ga0207700_10280923	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300025939\|Ga0207665_10467123	Not Available	970	Open in IMG/M
3300025945\|Ga0207679_10467055	Not Available	1121	Open in IMG/M
3300026294\|Ga0209839_10251773	Not Available	554	Open in IMG/M
3300026316\|Ga0209155_1253610	Not Available	545	Open in IMG/M
3300027575\|Ga0209525_1114289	Not Available	633	Open in IMG/M
3300027576\|Ga0209003_1113931	Not Available	514	Open in IMG/M
3300027590\|Ga0209116_1012848	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300027619\|Ga0209330_1120678	Not Available	595	Open in IMG/M
3300027706\|Ga0209581_1054786	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1538	Open in IMG/M
3300027745\|Ga0209908_10025015	Not Available	1168	Open in IMG/M
3300027783\|Ga0209448_10092215	Not Available	1015	Open in IMG/M
3300027812\|Ga0209656_10402755	Not Available	613	Open in IMG/M
3300027824\|Ga0209040_10223728	Not Available	960	Open in IMG/M
3300027842\|Ga0209580_10514800	Not Available	595	Open in IMG/M
3300027846\|Ga0209180_10688710	Not Available	557	Open in IMG/M
3300027854\|Ga0209517_10020654	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6123	Open in IMG/M
3300027867\|Ga0209167_10217042	Not Available	1021	Open in IMG/M
3300027898\|Ga0209067_10091182	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1578	Open in IMG/M
3300027898\|Ga0209067_10365783	Not Available	803	Open in IMG/M
3300027911\|Ga0209698_10105090	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2360	Open in IMG/M
3300028017\|Ga0265356_1000816	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5193	Open in IMG/M
3300028746\|Ga0302233_10205643	Not Available	752	Open in IMG/M
3300028746\|Ga0302233_10245773	Not Available	679	Open in IMG/M
3300028906\|Ga0308309_11615364	Not Available	552	Open in IMG/M
3300029916\|Ga0302148_1122119	Not Available	737	Open in IMG/M
3300029944\|Ga0311352_10530300	Not Available	948	Open in IMG/M
3300030503\|Ga0311370_11098951	Not Available	874	Open in IMG/M
3300030580\|Ga0311355_11157842	Not Available	685	Open in IMG/M
3300030763\|Ga0265763_1052580	Not Available	516	Open in IMG/M
3300030815\|Ga0265746_1056675	Not Available	556	Open in IMG/M
3300030991\|Ga0073994_12369242	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1548	Open in IMG/M
3300031128\|Ga0170823_15861040	Not Available	578	Open in IMG/M
3300031234\|Ga0302325_12458990	Not Available	623	Open in IMG/M
3300031708\|Ga0310686_111029595	Not Available	818	Open in IMG/M
3300031715\|Ga0307476_10004827	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8119	Open in IMG/M
3300031715\|Ga0307476_10465041	Not Available	937	Open in IMG/M
3300031715\|Ga0307476_11362983	Not Available	517	Open in IMG/M
3300031720\|Ga0307469_12183031	Not Available	539	Open in IMG/M
3300031754\|Ga0307475_10365701	Not Available	1159	Open in IMG/M
3300031823\|Ga0307478_10035188	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3639	Open in IMG/M
3300031823\|Ga0307478_11340869	Not Available	594	Open in IMG/M
3300031941\|Ga0310912_10767513	Not Available	746	Open in IMG/M
3300032074\|Ga0308173_11195057	Not Available	711	Open in IMG/M
3300032180\|Ga0307471_101152124	Not Available	940	Open in IMG/M
3300032180\|Ga0307471_101563361	Not Available	816	Open in IMG/M
3300032782\|Ga0335082_10029035	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5881	Open in IMG/M
3300032782\|Ga0335082_10219172	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1796	Open in IMG/M
3300032783\|Ga0335079_11646521	Not Available	629	Open in IMG/M
3300032828\|Ga0335080_10180728	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2327	Open in IMG/M
3300032828\|Ga0335080_12267747	Not Available	520	Open in IMG/M
3300032892\|Ga0335081_10540313	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1455	Open in IMG/M
3300032896\|Ga0335075_10275709	All Organisms → cellular organisms → Bacteria → Acidobacteria	1908	Open in IMG/M
3300032898\|Ga0335072_10185050	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2494	Open in IMG/M
3300033289\|Ga0310914_10176016	Not Available	1902	Open in IMG/M
3300033405\|Ga0326727_10909311	Not Available	657	Open in IMG/M
3300033412\|Ga0310810_11077684	Not Available	673	Open in IMG/M
3300033545\|Ga0316214_1009939	All Organisms → cellular organisms → Bacteria → Acidobacteria	1286	Open in IMG/M
3300033977\|Ga0314861_0534103	Not Available	500	Open in IMG/M
3300034125\|Ga0370484_0167415	Not Available	594	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.12%
Host-Associated	Host-Associated	6.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.75%
Aquatic	Environmental → Aquatic	14.37%
Plants	Host-Associated → Plants	6.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.12%
Freshwater	Environmental → Aquatic → Freshwater	10.00%
Peat	Environmental → Terrestrial → Peat	5.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.00%
Sediment	Environmental → Aquatic → Sediment	3.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.25%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.62%
Cave	Environmental → Terrestrial → Cave	0.62%
Roots	Host-Associated → Plants → Roots	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.12%
Loam	Environmental → Terrestrial → Soil → Loam	15.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.38%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.25%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.62%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.62%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.12%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.75%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.50%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.25%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.62%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.62%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.62%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.62%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.25%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.00%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.38%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.75%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.75%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.75%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.25%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.25%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.25%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.25%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.25%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.62%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.62%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.62%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.62%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.62%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.62%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.62%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.62%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.62%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.62%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.62%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.62%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011076	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022731	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027576	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028017	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4	Host-Associated	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029916	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_1	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_101855871	3300001356	Peatlands Soil	VKNRIFFKLLAVFLIVIAATAAILDVMLGGAWQSSL
JGI12659J15293_101525202	3300001546	Forest Soil	VKNRIFFKLLAVFLIVIAATAAILDVMIGNAWEASLRGDIERNLTQKTILFAHRV
JGI12635J15846_102909901	3300001593	Forest Soil	MKNRIFFRLLAVFLIIIAATAAILDVMIGSAWEASLHTEIERNLK
JGIcombinedJ26739_1007558491	3300002245	Forest Soil	LRSPNEEKVKNRIFFKLLAAFVVLILVSAVTFYVMIGGAWQASLRTEIERNLTQKTQ
JGIcombinedJ51221_100321973	3300003505	Forest Soil	LKNRIFFKLLAVFLIVIAATAAMLDVMLGNAWEGSLRTEI
Ga0062385_101230771	3300004080	Bog Forest Soil	VKNRIFFKLLAVFLLVIAATAVTMDFVLGSAWEASLRQEIERNLTQKTLLFARHV
Ga0062385_103372031	3300004080	Bog Forest Soil	VKNRIFFKLLAAFLIVIAASAVILDFTLGRAWEASLRAEIDRSLTQKTVM
Ga0062387_1005810462	3300004091	Bog Forest Soil	VKNRIFFKLLAVFLIVIAATAGILDVMLGSAWEGSLRSEIERNLTQKTLLFAHRV
Ga0062593_1001779803	3300004114	Soil	LKNRIFFKLLAVFLIIIAATAAILYVVIGNAWETSLRAEIERNLVQKTLLFAHRVETDK
Ga0066819_10178971	3300005148	Soil	VKNRIFFKLLAVFLIVIAATAATLDVMIGGAWEASLRTEIERNLTQKTLLFAHRVEID
Ga0066675_112101312	3300005187	Soil	LKNRIFFKLLAVFLIVIAATAAVLYVVIGNAWEASLRSEIERNLTQKTLLFAHRVE
Ga0070683_1002903691	3300005329	Corn Rhizosphere	LKNRIFFKLLAVFLIVIAATAAVLYVVIGNAWETSLRAEIERNLVQKTLLFAHRVE
Ga0070714_1005560042	3300005435	Agricultural Soil	VKNRIFFKLLAAFLVVIATTAVTLDFMIGSAWQASLRTEIERNLTQKTLLFAHRA
Ga0070713_1024623061	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VKYRIFLKLLAVFLVVIAATAAILDVMLGNAWESSLRAETQR
Ga0070735_103613571	3300005534	Surface Soil	VKNRIFFKLLAVFLIVIAATAAILDVTIGRAWQASLRSEIERNLTQKTL
Ga0070731_102010563	3300005538	Surface Soil	VKNRIFFKLLAASLVVILVTALTFNFMIGSAWEDSLRAEIERNLAQKTQLLAH
Ga0070731_107810852	3300005538	Surface Soil	MKNRIFFKLLAVFLIVIAATAAILDVMIGGAWEASLRAEIERNLTQKTLLFAHRVE
Ga0070733_100560661	3300005541	Surface Soil	VKNRIFFKLLASFLIVIAASAVILDFMLGRAWEASLRAEIDR
Ga0070732_106404092	3300005542	Surface Soil	MKNRIFFKLLAAFLIVIAATTVTLDFMLGSAWEASLRAEIERSLTQKTILFAHRVENDR
Ga0070664_1005977812	3300005564	Corn Rhizosphere	LKNRIFFKLLAVFLIVIAATAAVLYVVIGNAWEASLRAEIERNLTQKTLLFAHRVETDK
Ga0070762_110821512	3300005602	Soil	VKNRIFFKLLAVFLIVIAATAVILDVMIGGAWEAS
Ga0070740_100809693	3300005607	Surface Soil	VKNRIFFKLLAVFLIVIAATAAILDVTIGKAWEASLRSEIERNLTQKTLL
Ga0070766_106247501	3300005921	Soil	LKNRIFFKLLAVFLIVIAATAAILDVMLGNAWEGSLRTEIERNLKQKTLLFAHRVEIDH
Ga0066790_100288543	3300005995	Soil	VKNRIFFKLLAVFLIVIAATAAILDGMLVGAWEASLRTEIERNLTQKTLL
Ga0070717_114513291	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LKNRIFFKLLAVFLIVIAATAVILDAMIGKAWEASLRTEIERNLT
Ga0075029_1000256874	3300006052	Watersheds	VKNRIFFKLLAVFLIVIAATAGILDVMLGSAWESSLRAE
Ga0075029_1003922172	3300006052	Watersheds	VKNRIFFKLLAAFLVVIGATAATLDLMLGNAWEGSLRTEIQRNLEQKTQLFA
Ga0075017_1000982403	3300006059	Watersheds	VKNRIFFKLLAVFLIVIAATAGILDVMLGSAWESSLRAEIERN
Ga0070715_101634801	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VKNRIFFKLLAVFLIVIAATAVTLDVMLGSAWEASLRQEIERNLTQKTLLFA
Ga0070712_1013034211	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKNRIFFKLLAVFLIVIAATAAVLDVMIGNAWEASLRAEIERNLT
Ga0075436_1008728151	3300006914	Populus Rhizosphere	LKNRIFFKLLAVFLIIIAATAAVLYVVIGNAWETSLRAEI
Ga0116218_11161413	3300009522	Peatlands Soil	LKNRIFFKLLAVFLIVIAATAAILDVMLGSAWEASLRTDIERNLTQKTL
Ga0116225_12066172	3300009524	Peatlands Soil	VKNRIFFKPLAAFLIVIAATALTLDFMLGSAWEASLRAEIERNLT
Ga0126374_117135771	3300009792	Tropical Forest Soil	LKNRIFFKLLAVFLIVIAATAAILDMMLGSAWESSLRAEIERNLTQKTLMFAHRLEIDHQ
Ga0126372_103300601	3300010360	Tropical Forest Soil	LKNRIFFKLLAVFLIVIAATAAILDMMLGSAWESSLRAEIERNLT*
Ga0126381_1003909001	3300010376	Tropical Forest Soil	MRLAVAPSMKNRIFFKLLAVFLIVIAATAAILDVMIGGAWEASLRAEIERNLTQKTLLF
Ga0126381_1008331351	3300010376	Tropical Forest Soil	LKNRIFFKLFAVFLIVIAVAASILNVMIGKAWEASLRAEVERNL
Ga0126381_1050715951	3300010376	Tropical Forest Soil	LKNRIFFKLLTVFLLVIAATAFILDVMIGGAWEASLRAEIERNLTQKTLH
Ga0136449_1031005632	3300010379	Peatlands Soil	MKNRIFFKLLAGFLIVIAATALTLDFMLGSAWEASLRAEI
Ga0136449_1045149841	3300010379	Peatlands Soil	MKNRIFFKLLAAFLIVIAATAITLDFMLGSAWESSLRADIERNLTQKTLLFAHRVE
Ga0126383_104871833	3300010398	Tropical Forest Soil	LKNRIFFKLLAVFLIVIAATAAILDGMIGNAWEASLRNEVER
Ga0134121_133026721	3300010401	Terrestrial Soil	VRNRIFFKLLAVFLIVIAATAATLDVMIGGAWETSLRTEIERNLTQKTLL
Ga0138574_11284671	3300011076	Peatlands Soil	MKNRIFFKLLAGFLIVIAATALTLDFMLGSAWEASLRAEIERNLTQKTLLF
Ga0137392_103896071	3300011269	Vadose Zone Soil	VTQRIFFKLLAAFLVVIAATAITLDLTLGGAWEASLRSEIERNLTQKTQLFAHRVET
Ga0137391_100133425	3300011270	Vadose Zone Soil	VKNRIFFKLLAAFVAVIAVATFIFDFTLRGAWESSLRTEIERNLTQKTLLFAHRVETVRN
Ga0150985_1052274642	3300012212	Avena Fatua Rhizosphere	LKNRIFFKLLAAFLIVIAAAAAILYVMIGPAWQWSLRSEIERNLRQKTLLFA
Ga0150984_1106629922	3300012469	Avena Fatua Rhizosphere	LKNRIFFKLLAVFLIVIAAAAAILYVMIGPAWQVSLRSEI
Ga0164304_116319951	3300012986	Soil	LKNRIFFKLLAVFLIVIAATAAILNVMIGSAWEASLRAEIERNLIQK
Ga0164305_106221122	3300012989	Soil	LKNRIFFKLLAVFLIVIAATAAVLYVVIGNAWEASLRAEIQ
Ga0157373_113527602	3300013100	Corn Rhizosphere	LKNRIFFKLLAVFLIIIAATAAILYVVIGNAWETSLRAEIERNMVQKTLLFAHRVE
Ga0157374_115508891	3300013296	Miscanthus Rhizosphere	LKNRIFFKLLAVFLIIIAATAAILYVVIGNAWETSLRAEIERNMVQKT
Ga0157372_100196291	3300013307	Corn Rhizosphere	LKNRIFFKLLAVFLIVIAATAAVLYVVIGNAWEASLRA
Ga0181532_104226521	3300014164	Bog	VKNRIFFKLLAVFLIVIASTAAILDVMLGGAWEASLRTEIDRNLTQKTLL
Ga0181531_105317382	3300014169	Bog	VKNRIFFKLLAAFLIVIAASAVILDFTLGRAWEASLRAEIDRSLTQK
Ga0132257_1029031061	3300015373	Arabidopsis Rhizosphere	LKNRIFFKLLAVFLLVIAATAAIFDVMLGNAWEAS
Ga0182041_117965541	3300016294	Soil	LKNRIFFKLLAVFLIVIGATAALLDVMLGGAWERS
Ga0182037_103538071	3300016404	Soil	LKNRIFFKLLAVFLIVIGATAALLDVMLASAWEQSLRTEIQRNLTQKTLMFAHR
Ga0187818_104850122	3300017823	Freshwater Sediment	VKNRIFFKLLAVFLIVIAATAVILDVMIGGAWETSLRAEIERNLTQKTLLFA
Ga0187820_11624123	3300017924	Freshwater Sediment	VKNRIFFKLLTVFLLVIAATAGILDMMIGGAWEASLRAEIERNLTQ
Ga0187819_106712101	3300017943	Freshwater Sediment	VKNRIFFKLLTAFLIAIAATAFTLDYMLGSAWERSLRVEIERSLTQKALLFAHRVE
Ga0187782_102288461	3300017975	Tropical Peatland	VKSRIFFKLLVAFLVVIAATAVTLDLMIGGAWESSLRGEIQRNLTEKT
Ga0187864_101232893	3300018022	Peatland	VKNRIFFKLLAAFLIVIAATALTLDAMLGSAWEASLRAQIERDLTQKTLLFA
Ga0187869_105495282	3300018030	Peatland	VKNRIFFKLLAAFLIVIAATALTLDAMLGSAWEASLRAQIERDLTQKT
Ga0187855_105551921	3300018038	Peatland	VKNRIFFKLLAAFLIVIAASAVILDFTLGRAWEASLRAEIDRSL
Ga0187890_101621113	3300018044	Peatland	VKNRIFFKLLAAFLIVIAASAVILDFTLGRAWEASLRAEIDRSLT
Ga0187784_102714833	3300018062	Tropical Peatland	MKNRIFFKLLAVFLIVIAATAAILDGMLGSAWAGSLRTEIER
Ga0187772_111049471	3300018085	Tropical Peatland	VRNRIFFKLLAAFLVVIIAAAVTFDIMIGGAWEASLRREIQRNLTQKTE
Ga0066669_121553031	3300018482	Grasslands Soil	LKNRIFFKLLAVFLIVIAATAAVLYVVIGNAWEASLRSEIERNLTQKTLLFAHR
Ga0193726_12314941	3300020021	Soil	VKNRIFFKLLAAFLAVIAVTAVTLDFMLGGAWEASLRSETEQSLTQKT
Ga0210407_101220761	3300020579	Soil	VKNRIFFKLLAVFLIVIAATAVILDVMIGAAWEASLRTEIERNLTQKTLLFAHRVESDRA
Ga0210400_115209881	3300021170	Soil	VKNRIFFKLLAAFLVVIAATAITLDFMLGSAWEASLRTEIERNLTQKTL
Ga0210405_102358423	3300021171	Soil	VKNRIFFKLLAAFLIVIAASAVILDFTLGRAWEASLRAEIDRSLTQKTVMF
Ga0210393_107247491	3300021401	Soil	VKNRIFFKLLAAFLIVIAASAVILDFTLGRAWEAS
Ga0210393_113803342	3300021401	Soil	MKNRIFFKLLAVFLIIIAATAIIMDLVISGSWEDSLRT
Ga0210385_103067733	3300021402	Soil	MKNRIFFKLLAVFLIVIAATAVIMDLVLGGAWEDSLRTEIERNLVQKTTL
Ga0210385_111075751	3300021402	Soil	MKNRIFFKLLAVFLIIIAATAIIMDLVISGSWQDSLRTEIQRSLVQKTTLFAH
Ga0210386_101031331	3300021406	Soil	LENDANVKNRIFFKLLAVFLIVIAATATILDVMLSGAWESSM
Ga0210383_114014852	3300021407	Soil	MKNRIFFKLLAVFLIVIAATAMILDLMLGGAWEASLRAEIERNLTQKTLLLAHRV
Ga0210394_117628012	3300021420	Soil	VKNRIFFKLLAVFLIIIAATAVTLDVMIGSAWEASLR
Ga0210391_107140692	3300021433	Soil	VKSRIFFKLLAAFLLVIAASAVILDFTLGRAWEASLRAEIDRSLTQKTVMFAHRVE
Ga0210390_100017451	3300021474	Soil	LENDANVKNRIFFKLLAVFLIVIAATATILDVMLSGAWESSMRSEIER
Ga0210392_114257642	3300021475	Soil	VKNRIFFKLLAVFLIVIAATAATLDVMLGSAWESSLRTEIERNLTQKTQLFAHRVEA
Ga0187846_103366741	3300021476	Biofilm	LKNRIFFKLLAVFLIVIAATAAILDVMLGSAWEASLRTEIKRNLRQK
Ga0210398_101984801	3300021477	Soil	VKNRIFFKLLAVFLIVIAATATILDVMLSGAWESSM
Ga0210402_104908163	3300021478	Soil	LKNRIFFKLLAVFLIVIAATAAILDVMIGSAWEASLRAEIERNLTQK
Ga0210402_118642022	3300021478	Soil	VKNRIFFKLLAVFLLVIAATAVTMDFVVGSAWETSLRSDIQRNLTQKTLLF
Ga0210402_119543611	3300021478	Soil	VRNRIFFKLLAAFLVVILAAAVTFDLTLGGAWEASLRNEIERNLTQKTELFAHRVE
Ga0210410_100238041	3300021479	Soil	LKNRIFFKLLAVFLIVIAATAAMLDVMLGNAWEGSLRTEIE
Ga0213853_112804393	3300021861	Watersheds	VKNRIFFKLLAVFLIVIAATAGILDVMLGSAWESSLRAEIERNL
Ga0242659_10389592	3300022522	Soil	LKNRIFFRLLAVFLIVIAATAAMLDVMLGNAWEGSLRTEIERNLK
Ga0242669_10299651	3300022528	Soil	LKNRIFFRLLAVFLIVIAATAAMLDVMLGNAWEGSLRTEIERNLKQ
Ga0242660_11376681	3300022531	Soil	LKNRIFFRLLAVFLIVIAATAAMLDVMLGNAWEGS
Ga0212123_103278791	3300022557	Iron-Sulfur Acid Spring	VKNRIFFKLLAVFLIVIAATAVILDVMIGGAWETSLRTEIER
Ga0242653_10279062	3300022712	Soil	LKNRIFFKLLAVFLIVIAATAAMLDVMLGNAWEGSLRTEIERNLKQKT
Ga0224563_10187571	3300022731	Soil	VKNRIFFKLLAAFLIVIAASAVILDFTLGRAWEASLRAEIDRS
Ga0207685_108132422	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	LKNRIFFKLLAVFLIVIAATAAILNVMIGSAWEASLRAEIERNLIQKTLLFA
Ga0207693_104716462	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VKNRIFFKLLAVFLVVIAATAAILDVMIGGAWEASLRTEIERNLTQKTLLF
Ga0207663_116530792	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKNRMFFKLLAVFLIVIAATAVILDVMIGKAWEASLRTEIERNLTQK
Ga0207652_103597751	3300025921	Corn Rhizosphere	LKNRIFFKLLAVFLIVIAATAAVLYVVIGNAWEASLRAEIERNLTQ
Ga0207700_102809233	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VKNRIFFKLLAVFLIVIAATAATLDVMIGGAWEASLRT
Ga0207665_104671231	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VRSRIFFKLLAVFLIVIASSAAILNAMIGNAWEASMRSEIERNLTQKTLLFAH
Ga0207679_104670551	3300025945	Corn Rhizosphere	LKNRIFFKLLAVFLIVIAATAAVLYVVIGNAWEASLRAEIER
Ga0209839_102517732	3300026294	Soil	VKNRIFFKLLTAFVIVIAITAAILDGMIGSAWQSSLRNEIDRNLTQKTLLFAHR
Ga0209155_12536101	3300026316	Soil	LKNRIFFKLLAVFLIVIAATAAVLYVVIGNAWEASLRSEIER
Ga0209525_11142891	3300027575	Forest Soil	VKNRIFFKLLAVFLIVIAATAVILDVMIGGAWETSLRTEIERNLTQKTLLFAHRVETDRA
Ga0209003_11139312	3300027576	Forest Soil	LKNRIFFKLLAVFLIVIAATAAILDVMIGNAWEASLRAEIERDLTQ
Ga0209116_10128481	3300027590	Forest Soil	VKNRIFFKLLAAFLIVIAASAVILDFTLGRAWEASLRAEIDRSLTQKT
Ga0209330_11206782	3300027619	Forest Soil	VKNRIFFKLLAVFVIVIAATASILDVMLGSAWETSLRTEIERNLTQKTLLFAHRVETDRA
Ga0209581_10547863	3300027706	Surface Soil	VKNRIFFKLLAVFLIIIAATAVILDLMIGNAWEASLRAEIE
Ga0209908_100250151	3300027745	Thawing Permafrost	VKNRIFFKLLAVFVIVIAATASILDVMLGSAWETSLRTE
Ga0209448_100922152	3300027783	Bog Forest Soil	VKNRIFFKLLAVFLIVIAATAGILDVMLGSAWEGSLRSEIERNLTKRANGAFSTS
Ga0209656_104027551	3300027812	Bog Forest Soil	VKNRIFFKLLAVFLIVIAATDTILDVMLSGAWESSMHSEIERNLTQK
Ga0209040_102237281	3300027824	Bog Forest Soil	MKNRIFFKLLAVFLIVIAATALIMDLMLGSAWEASVRSEIERNL
Ga0209580_105148001	3300027842	Surface Soil	VKNRIFFKLLAVFLIVIAATATTLDVMIGGAWESSLRAEIERNLTQ
Ga0209180_106887102	3300027846	Vadose Zone Soil	VKNRIFFKLLATFLVVIAVTAITLDFTLGSAWESSLRAEVERDLTQKTLLFAHRV
Ga0209517_100206541	3300027854	Peatlands Soil	VKNRIFFKLLAVFLIVIAATATILDVMLGGAWESSMRNEIERNLTQKTLLFAH
Ga0209167_102170421	3300027867	Surface Soil	VKNRIFFKLLASFLIVIAASAVILDFMLGRAWEASLRAEIDRSLT
Ga0209067_100911821	3300027898	Watersheds	VKNRIFFKLLAVFLIVIAATAAILDVMLGSAWEASLRAEIQRNLTQKT
Ga0209067_103657831	3300027898	Watersheds	VRSSTFFKLIALFLAVIAASAIIYDVTVSRAWEASLRREIERDLTQK
Ga0209698_101050901	3300027911	Watersheds	VKNRIFFKLLAVFLIVIAATAGILDVMLGSAWESSL
Ga0265356_10008161	3300028017	Rhizosphere	VKNRIFFKLLAAFLIVIAASAVILDFTLGRAWEASLRAEIDRSLTQKTVMFAHRVEN
Ga0302233_102056431	3300028746	Palsa	VKNRIFFKLLAAFLIVIAASALILDFTLGRAWEASLRAEIDR
Ga0302233_102457731	3300028746	Palsa	LKNRIFFKLLAVFLIVIAATAAILDVMLSGAWESSMRSEIERNLTQKTLLF
Ga0308309_116153641	3300028906	Soil	VKNRIFFKLLAVFLIVIAATALILDVMLGGAWEASIHAEIA
Ga0302148_11221192	3300029916	Bog	LKPQSEYSLRNRIFFKLLAAFLIVIVAAAITFDFAVGGAWQSSLRAEIERNL
Ga0311352_105303001	3300029944	Palsa	MKNRIFFKLLAVFLVVIAATAGILDVMLGNAWAASLRAEIE
Ga0311370_110989512	3300030503	Palsa	VKNRIFFKLLAVFLIVIAATAAILDVMLGGAWEASLRTEIERSLTQKTLLFAHRVET
Ga0311355_111578422	3300030580	Palsa	VKNRIFFKLLAAFLIVIAASALILDFTLGRAWEASLRAEIDRSLTQKTVMF
Ga0265763_10525802	3300030763	Soil	VKNRIFFKLLAVFLIVIAATAVILDVMIGGAWETSLRTEIERNLTQKTLLFAHRVETDR
Ga0265746_10566751	3300030815	Soil	VKNRIFFKLLAVFLIVIAATAAILDVMIGGAWEASLRAEIERSLTQKTLLF
Ga0073994_123692421	3300030991	Soil	VKNRIFFKLLAVFLIVIVATAAILDVMIGSAWETSLRSE
Ga0170823_158610402	3300031128	Forest Soil	VKNRIFFKLLAVFLIVIAATAAILDVMIGGAWEASLRGEIERSLTQKTL
Ga0302325_124589901	3300031234	Palsa	VKNRIFFKLLAAFLVVIAAAAIIFDITLRNAWQDSLRSEIERNLEQK
Ga0310686_1110295952	3300031708	Soil	VKNRIFFKLLAVFLIVIAATATILDVMLSGAWESSMRNEIERNLTQKTR
Ga0307476_100048276	3300031715	Hardwood Forest Soil	VKNRIFFKLLAVFLIVIAATAVILDVMIGGAWETSLRTEIERNLTQKTL
Ga0307476_104650411	3300031715	Hardwood Forest Soil	MKNRIFFKLLAVFLIVIAATAVIMDLVLGGAWEDSLRTEIERNLVQKTTLFAHRV
Ga0307476_113629832	3300031715	Hardwood Forest Soil	LKNRIFFKLLAVFLIVIAATAAILDVMIGGAWEASLRTEIERNLTQKA
Ga0307469_121830311	3300031720	Hardwood Forest Soil	VRNRIFFKLLAVFLIVIAATAATLDVMIGGAWETSLRTEIERNLTQKTLLN
Ga0307475_103657012	3300031754	Hardwood Forest Soil	LKNRIFFKLLAVFLIVIAATAAILDVMLGGAWEASLRAEIERSLTQKTLLFA
Ga0307478_100351881	3300031823	Hardwood Forest Soil	VKNRIFFKLLAVFLIVIAVTVATLVLMIGRAWEDSLRAE
Ga0307478_113408692	3300031823	Hardwood Forest Soil	VKDRIFFKLLAVFLIVIAATAAILDVMIGGAWEASLRAEIERNLTQKTLLFAHRVE
Ga0310912_107675131	3300031941	Soil	LKNRIFFKLLAIFLIVIAATAFILDMMLGSAWERSLRAEIERNLTQKT
Ga0308173_111950571	3300032074	Soil	LKNRIFFKLLAVFLFVIAATAAVLYVVIGNAWETSLRAEIER
Ga0307471_1011521242	3300032180	Hardwood Forest Soil	LKNRIFFKLLAVFLVVIAATAAILDVMLGNAWEASLR
Ga0307471_1015633611	3300032180	Hardwood Forest Soil	LKNRIFFKLLAVFLIVIAATAGILDVMLGNAWEGS
Ga0307471_1017078472	3300032180	Hardwood Forest Soil	VRNRIFFKLLAAFVLVVVAAAVIFDVMIGAAWQASLRTEIERNLI
Ga0335082_100290351	3300032782	Soil	LKNRIFFKLLTVFLLVIAATAFILDLMIGGAWEASL
Ga0335082_102191723	3300032782	Soil	MKNRIFFKLLAVFLIVIAVTAGIFYLMLGSAWEGSLRAEIE
Ga0335079_116465212	3300032783	Soil	VKNRIFFKLLVVFLIVIAATALILDAMIGKAWEASLRAEIERTLTQKTL
Ga0335080_101807283	3300032828	Soil	MKNRIFFKLLVVFLIVIGSTAAILDVVLGGAWAGSVRGEIERNLT
Ga0335080_122677471	3300032828	Soil	VKNRIFFKLLAAFLVVIGATAVTLDLMLGSAWEASLRTQIERNLTQKTLLFAHRVEADHGAHS
Ga0335081_105403131	3300032892	Soil	VKNRIFFKLLAVFLIVIFATAAILDVLIGNAWESSLRGEIERNLTQKTLLFAHRVEN
Ga0335075_102757094	3300032896	Soil	VRNRIFFKLLAAFVLVIATAAVIFDVMIGGAWEASLRAEIERNL
Ga0335072_101850503	3300032898	Soil	VRNRIFFKLLAAFVVLIVASALTFDLTLDGAWQASLHAEIERDLTQKTLLFAHRVEID
Ga0310914_101760164	3300033289	Soil	LKNRIFFKLLAIFLIVIAATAFILDMMLGSAWERSLRAEIERNLTQKTL
Ga0326727_109093111	3300033405	Peat Soil	VKNRIFFKLLAVFLIVIAATAAILDVMLGGAWESSLRT
Ga0310810_110776841	3300033412	Soil	LKNRIFFKLLAVFLIVIAATAAVLYVVIGNAWEASLRAEIERNLTQKTLLFAHR
Ga0316214_10099393	3300033545	Roots	MKNRIFFKLLAVFLIIIAATAIIMDLVISGSWQDSLRTEIQRSLVQK
Ga0314861_0534103_317_499	3300033977	Peatland	MRATVRNRIFFKLLVAFLIAIVATAITLDYILASAWEHSLRTETERNLTQKTLLFAHRVE
Ga0370484_0167415_3_170	3300034125	Untreated Peat Soil	VKNRIFFKLLAVFLIVIAATAAILDVMLGSAWEASLRTEIERNLTQKTKLFARRVE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041471

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign