Metagenome / Metatranscriptome Family F041467

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041467
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	45 residues
Representative Sequence	DIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEADILADDLL
Number of Associated Samples	137
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.50 %
% of genes near scaffold ends (potentially truncated)	90.00 %
% of genes from short scaffolds (< 2000 bps)	91.88 %
Associated GOLD sequencing projects	127
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.125 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.875 % of family members)
Environment Ontology (ENVO)	Unclassified (20.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.625 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.62% β-sheet: 0.00% Coil/Unstructured: 78.38%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF00574	CLP_protease	3.12
PF05653	Mg_trans_NIPA	1.88
PF13396	PLDc_N	1.25
PF00440	TetR_N	1.25
PF00294	PfkB	0.62
PF14690	zf-ISL3	0.62
PF13302	Acetyltransf_3	0.62
PF12773	DZR	0.62
PF11271	PorA	0.62
PF13701	DDE_Tnp_1_4	0.62
PF06736	TMEM175	0.62
PF00903	Glyoxalase	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	6.25
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	6.25
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	3.12
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.12 %
Unclassified	root	N/A	16.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.12 %
Unclassified	root	N/A	16.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.12 %
Unclassified	root	N/A	16.88 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	81.25 %
Unclassified	root	N/A	16.88 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.62 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	75.62 %
Unclassified	root	N/A	16.88 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.62 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	69.38 %
Unclassified	root	N/A	16.88 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.62 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	51.25 %
Unclassified	root	N/A	16.88 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.62 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.62 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.62 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.62 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.88 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	1.25 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.62 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.62 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.62 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.62 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.88 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	1.25 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.62 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.62 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.62 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.88 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1.25 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.62 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.62 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.62 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001593\|JGI12635J15846_10910084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300002245\|JGIcombinedJ26739_101216015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	643	Open in IMG/M
3300003368\|JGI26340J50214_10008120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3378	Open in IMG/M
3300004152\|Ga0062386_101058212	Not Available	673	Open in IMG/M
3300005328\|Ga0070676_10215947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1264	Open in IMG/M
3300005334\|Ga0068869_100394579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1137	Open in IMG/M
3300005434\|Ga0070709_10059320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2429	Open in IMG/M
3300005434\|Ga0070709_10886945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	704	Open in IMG/M
3300005435\|Ga0070714_102158936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	542	Open in IMG/M
3300005436\|Ga0070713_101984084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	564	Open in IMG/M
3300005436\|Ga0070713_102205905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	533	Open in IMG/M
3300005439\|Ga0070711_101487506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	590	Open in IMG/M
3300005439\|Ga0070711_101896778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	523	Open in IMG/M
3300005467\|Ga0070706_102014523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	523	Open in IMG/M
3300005549\|Ga0070704_101631484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	595	Open in IMG/M
3300005557\|Ga0066704_10547899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	754	Open in IMG/M
3300005844\|Ga0068862_100084969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2749	Open in IMG/M
3300005921\|Ga0070766_10469374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	833	Open in IMG/M
3300006163\|Ga0070715_10215682	Not Available	984	Open in IMG/M
3300006172\|Ga0075018_10531262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	617	Open in IMG/M
3300006175\|Ga0070712_101069512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	699	Open in IMG/M
3300006577\|Ga0074050_12048128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	574	Open in IMG/M
3300006881\|Ga0068865_100234407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1441	Open in IMG/M
3300007076\|Ga0075435_100895846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	774	Open in IMG/M
3300009012\|Ga0066710_103703200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	575	Open in IMG/M
3300009089\|Ga0099828_11621158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	570	Open in IMG/M
3300009098\|Ga0105245_10645042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1089	Open in IMG/M
3300009098\|Ga0105245_12197252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	606	Open in IMG/M
3300009177\|Ga0105248_10607316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1234	Open in IMG/M
3300009522\|Ga0116218_1197543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	908	Open in IMG/M
3300009522\|Ga0116218_1343863	Not Available	667	Open in IMG/M
3300009525\|Ga0116220_10272821	Not Available	741	Open in IMG/M
3300009698\|Ga0116216_10137522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1502	Open in IMG/M
3300009698\|Ga0116216_10376317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	863	Open in IMG/M
3300009764\|Ga0116134_1084090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1167	Open in IMG/M
3300010048\|Ga0126373_11249195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	809	Open in IMG/M
3300010335\|Ga0134063_10607250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	557	Open in IMG/M
3300010343\|Ga0074044_10386215	Not Available	917	Open in IMG/M
3300010366\|Ga0126379_12532609	Not Available	611	Open in IMG/M
3300010379\|Ga0136449_100344576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2682	Open in IMG/M
3300010379\|Ga0136449_102075006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	836	Open in IMG/M
3300010379\|Ga0136449_102932508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	669	Open in IMG/M
3300010396\|Ga0134126_12279348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	590	Open in IMG/M
3300010396\|Ga0134126_12474446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	565	Open in IMG/M
3300010876\|Ga0126361_10652163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1132	Open in IMG/M
3300011003\|Ga0138514_100109370	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300012096\|Ga0137389_10268382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1438	Open in IMG/M
3300012200\|Ga0137382_11326505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	507	Open in IMG/M
3300012208\|Ga0137376_11473532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	572	Open in IMG/M
3300012210\|Ga0137378_10255080	Not Available	1632	Open in IMG/M
3300012924\|Ga0137413_10888384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	691	Open in IMG/M
3300013297\|Ga0157378_12026340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	626	Open in IMG/M
3300013307\|Ga0157372_11355009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	821	Open in IMG/M
3300014164\|Ga0181532_10088480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1952	Open in IMG/M
3300014969\|Ga0157376_11035692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	844	Open in IMG/M
3300015242\|Ga0137412_10891907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	645	Open in IMG/M
3300016341\|Ga0182035_10123683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1940	Open in IMG/M
3300016422\|Ga0182039_11083684	All Organisms → cellular organisms → Bacteria → Terrabacteria group	721	Open in IMG/M
3300017924\|Ga0187820_1004953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3092	Open in IMG/M
3300017924\|Ga0187820_1056275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1072	Open in IMG/M
3300017932\|Ga0187814_10366047	Not Available	558	Open in IMG/M
3300017933\|Ga0187801_10013292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2722	Open in IMG/M
3300017943\|Ga0187819_10605098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	621	Open in IMG/M
3300017943\|Ga0187819_10728354	Not Available	558	Open in IMG/M
3300017955\|Ga0187817_11018132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300017970\|Ga0187783_11160277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	556	Open in IMG/M
3300017972\|Ga0187781_10406692	All Organisms → cellular organisms → Bacteria → Terrabacteria group	972	Open in IMG/M
3300017973\|Ga0187780_10326456	Not Available	1081	Open in IMG/M
3300018037\|Ga0187883_10341063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	766	Open in IMG/M
3300018060\|Ga0187765_10314519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	943	Open in IMG/M
3300018060\|Ga0187765_10913891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	595	Open in IMG/M
3300018062\|Ga0187784_10132703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2033	Open in IMG/M
3300018085\|Ga0187772_10223386	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1272	Open in IMG/M
3300018085\|Ga0187772_10520268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	840	Open in IMG/M
3300018086\|Ga0187769_10685021	All Organisms → cellular organisms → Bacteria → Terrabacteria group	775	Open in IMG/M
3300018086\|Ga0187769_11332036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	543	Open in IMG/M
3300018482\|Ga0066669_10266210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1367	Open in IMG/M
3300020170\|Ga0179594_10090279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1091	Open in IMG/M
3300020580\|Ga0210403_10736519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	788	Open in IMG/M
3300020583\|Ga0210401_10193089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1893	Open in IMG/M
3300020583\|Ga0210401_10658047	Not Available	909	Open in IMG/M
3300021088\|Ga0210404_10168595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1158	Open in IMG/M
3300021171\|Ga0210405_10597282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	860	Open in IMG/M
3300021180\|Ga0210396_11360507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	589	Open in IMG/M
3300021362\|Ga0213882_10446887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	549	Open in IMG/M
3300021401\|Ga0210393_10740210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	801	Open in IMG/M
3300021401\|Ga0210393_11476671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	541	Open in IMG/M
3300021402\|Ga0210385_10315763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1161	Open in IMG/M
3300021403\|Ga0210397_10048631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2712	Open in IMG/M
3300021403\|Ga0210397_10316555	Not Available	1149	Open in IMG/M
3300021403\|Ga0210397_11079990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	623	Open in IMG/M
3300021407\|Ga0210383_11530586	Not Available	551	Open in IMG/M
3300021474\|Ga0210390_11134847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	633	Open in IMG/M
3300021479\|Ga0210410_10716195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	883	Open in IMG/M
3300024279\|Ga0247692_1008361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1622	Open in IMG/M
3300025906\|Ga0207699_10814253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	687	Open in IMG/M
3300025907\|Ga0207645_10266832	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1134	Open in IMG/M
3300025912\|Ga0207707_10275383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1458	Open in IMG/M
3300025915\|Ga0207693_10448932	Not Available	1008	Open in IMG/M
3300025916\|Ga0207663_11605603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	523	Open in IMG/M
3300025921\|Ga0207652_10560672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1026	Open in IMG/M
3300025927\|Ga0207687_11577086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	564	Open in IMG/M
3300025929\|Ga0207664_10560599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1025	Open in IMG/M
3300025932\|Ga0207690_10614554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	888	Open in IMG/M
3300025986\|Ga0207658_11624392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	591	Open in IMG/M
3300026088\|Ga0207641_12463425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	519	Open in IMG/M
3300027071\|Ga0209214_1037042	All Organisms → cellular organisms → Bacteria → Acidobacteria	650	Open in IMG/M
3300027110\|Ga0208488_1062403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	627	Open in IMG/M
3300027165\|Ga0208608_116030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500	Open in IMG/M
3300027729\|Ga0209248_10263393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300027857\|Ga0209166_10673737	Not Available	522	Open in IMG/M
3300027884\|Ga0209275_10497990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	694	Open in IMG/M
3300028784\|Ga0307282_10141623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1135	Open in IMG/M
3300028828\|Ga0307312_10073961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2071	Open in IMG/M
3300029943\|Ga0311340_10071583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	3962	Open in IMG/M
3300030494\|Ga0310037_10303176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	680	Open in IMG/M
3300030730\|Ga0307482_1259053	Not Available	548	Open in IMG/M
3300031184\|Ga0307499_10119584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	742	Open in IMG/M
3300031199\|Ga0307495_10002701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2010	Open in IMG/M
3300031543\|Ga0318516_10018016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3558	Open in IMG/M
3300031549\|Ga0318571_10118609	Not Available	885	Open in IMG/M
3300031564\|Ga0318573_10333818	All Organisms → cellular organisms → Bacteria → Terrabacteria group	813	Open in IMG/M
3300031572\|Ga0318515_10004557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5693	Open in IMG/M
3300031572\|Ga0318515_10584203	Not Available	594	Open in IMG/M
3300031713\|Ga0318496_10853689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	502	Open in IMG/M
3300031718\|Ga0307474_10177907	Not Available	1613	Open in IMG/M
3300031724\|Ga0318500_10283402	Not Available	809	Open in IMG/M
3300031740\|Ga0307468_101858662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	572	Open in IMG/M
3300031751\|Ga0318494_10237903	Not Available	1042	Open in IMG/M
3300031765\|Ga0318554_10419213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	759	Open in IMG/M
3300031770\|Ga0318521_10395624	All Organisms → cellular organisms → Bacteria → Terrabacteria group	823	Open in IMG/M
3300031780\|Ga0318508_1069717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	951	Open in IMG/M
3300031782\|Ga0318552_10164305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1118	Open in IMG/M
3300031782\|Ga0318552_10168123	Not Available	1105	Open in IMG/M
3300031782\|Ga0318552_10252932	Not Available	894	Open in IMG/M
3300031782\|Ga0318552_10307979	Not Available	805	Open in IMG/M
3300031796\|Ga0318576_10261465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	817	Open in IMG/M
3300031799\|Ga0318565_10180553	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1026	Open in IMG/M
3300031799\|Ga0318565_10359724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	706	Open in IMG/M
3300031835\|Ga0318517_10112262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1202	Open in IMG/M
3300031846\|Ga0318512_10250027	Not Available	875	Open in IMG/M
3300031879\|Ga0306919_10142471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1740	Open in IMG/M
3300031912\|Ga0306921_10538766	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1355	Open in IMG/M
3300032010\|Ga0318569_10513682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	558	Open in IMG/M
3300032044\|Ga0318558_10423833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	663	Open in IMG/M
3300032052\|Ga0318506_10309296	All Organisms → cellular organisms → Bacteria → Terrabacteria group	701	Open in IMG/M
3300032063\|Ga0318504_10419556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	638	Open in IMG/M
3300032065\|Ga0318513_10529879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	577	Open in IMG/M
3300032067\|Ga0318524_10278545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	863	Open in IMG/M
3300032068\|Ga0318553_10339208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	787	Open in IMG/M
3300032160\|Ga0311301_11400197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	872	Open in IMG/M
3300032174\|Ga0307470_11286093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	598	Open in IMG/M
3300032205\|Ga0307472_101048430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	768	Open in IMG/M
3300032261\|Ga0306920_102877116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	653	Open in IMG/M
3300032770\|Ga0335085_10779654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1054	Open in IMG/M
3300032828\|Ga0335080_12132167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	540	Open in IMG/M
3300032954\|Ga0335083_10567039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	940	Open in IMG/M
3300033134\|Ga0335073_10774171	Not Available	1034	Open in IMG/M
3300034199\|Ga0370514_078506	Not Available	837	Open in IMG/M
3300034817\|Ga0373948_0104787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	670	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.38%
Host-Associated	Host-Associated	10.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.62%
Plants	Host-Associated → Plants	10.62%
Aquatic	Environmental → Aquatic	8.75%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.75%
Freshwater	Environmental → Aquatic → Freshwater	8.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.12%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.50%
Sediment	Environmental → Aquatic → Sediment	0.62%
Peat	Environmental → Terrestrial → Peat	0.62%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.62%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.75%
Loam	Environmental → Terrestrial → Soil → Loam	15.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.12%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.12%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.00%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.50%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.88%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.12%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.25%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.00%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.12%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.50%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.50%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.25%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.25%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.25%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.25%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.62%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.62%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.62%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.62%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.62%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.62%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.62%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.62%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.62%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027165	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF035 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_109100841	3300001593	Forest Soil	DQAEPVPDEEHQRLMDCARRGEVTKITADQADILGGG*
JGIcombinedJ26739_1012160151	3300002245	Forest Soil	MLPKLAVPVPDEEHNRLMTCARRGEVTKITAGQADVLADDLM*
JGI26340J50214_100081203	3300003368	Bog Forest Soil	LRHLYRIEDDIPLMLPKLAVPVSDEEHNRLMKCARRGEVTTITAGQADVLADDPV*
Ga0062386_1010582122	3300004152	Bog Forest Soil	KLAVPVSDEEHNRLMKCARRGEVTTITAGQADVLADDPV*
Ga0070676_102159472	3300005328	Miscanthus Rhizosphere	LRRLYRIENDIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAGMLADELL*
Ga0068869_1003945791	3300005334	Miscanthus Rhizosphere	PLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAEMLADELL*
Ga0070709_100593203	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	AVPVPEEEHRRLMKCARRGEVTTVTAGSGFQADMLTGTD*
Ga0070709_108869451	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LYRIENDIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAGLLADDLI*
Ga0070714_1021589362	3300005435	Agricultural Soil	KLAVPVPDEEHNRLMKCARRGEVTAITAGEAGMLADEML*
Ga0070713_1019840842	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LYRIENDIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAGMLADELL*
Ga0070713_1022059051	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	DIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAEMLADEML*
Ga0070711_1014875061	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	DIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEADMLADELL*
Ga0070711_1018967781	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAGMLADELL*
Ga0070706_1020145232	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RLYRIENGIPLMLPKLGEPVPDEEHSRLMKCARRGEVTTITAGETDALADNLG*
Ga0070704_1016314841	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	RLRRLYRIQDGIPLMLPSQAVPVPDEEHRRLMKCARRGEVTTVTTGSGFQADMLTGTD*
Ga0066704_105478992	3300005557	Soil	AVPVPDEEHKRLMNCARRGEVTKITAGEADVLADDLI*
Ga0068862_1000849691	3300005844	Switchgrass Rhizosphere	VPVPDEEHNRLMKCARRGEVTAITAGEAGMLADELL*
Ga0070766_104693742	3300005921	Soil	PARAEPVPDEEHDRLMKCARRGEVTAITAGQSDVLAD*
Ga0070715_102156822	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	IPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAGLLADDLI*
Ga0075018_105312622	3300006172	Watersheds	IPFMLPKLAVPVPEEEHNRLMKCARRGEVTAITAGETEMLADDLL*
Ga0070712_1010695122	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	NDIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAEMLADEML*
Ga0074050_120481281	3300006577	Soil	RLYRIENDIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEADILADDLL*
Ga0068865_1002344072	3300006881	Miscanthus Rhizosphere	IENDIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAEMLADELL*
Ga0075435_1008958462	3300007076	Populus Rhizosphere	NDIPLMLPKLAVPVPDEEHIRLMKCARRGEVTAITAGEAGMLADELL*
Ga0066710_1037032001	3300009012	Grasslands Soil	RLRRLYRIEAGIPLMLPRQAVPVPEEEHSRLMKCARRGEVTTITAGSGFQADVLAGTDLA
Ga0099828_116211581	3300009089	Vadose Zone Soil	PKLAVPVPDEEHNRLMRCARRGEVTKITAGQADVLADDLM*
Ga0105245_106450421	3300009098	Miscanthus Rhizosphere	DIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAGMLADELL*
Ga0105245_121972521	3300009098	Miscanthus Rhizosphere	RIENDIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAVEAEMLADELL*
Ga0105248_106073161	3300009177	Switchgrass Rhizosphere	MLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAGMLADELL*
Ga0116218_11975431	3300009522	Peatlands Soil	YRIENDIPLMLPKLAVPVSDEEHNRLMKCARRGEVTMITAGQADVLADDPV*
Ga0116218_13438631	3300009522	Peatlands Soil	EPVPDEEHIRLMKCARLGQAAVTAREAGLLADDQT*
Ga0116220_102728212	3300009525	Peatlands Soil	LRRLYRIQDGVPLMLARQAVPVPEEEHNRLMKCARRGEVTAITAGQADILAGD*
Ga0116216_101375222	3300009698	Peatlands Soil	PLMLARQAVPVPDEEHNRLMKCARRGEVTAITAGQADILADD*
Ga0116216_103763171	3300009698	Peatlands Soil	MLPKLAVPVSDEEHNRLMKCARRGEVTMITAGQADVLADDPV*
Ga0116134_10840901	3300009764	Peatland	RIENDIPLMLPKLAVPVSDEEHNRLMKCARRGEVTRITADQADVLADDPGVTR*
Ga0126373_112491951	3300010048	Tropical Forest Soil	QAVPVPEEEHQRLMKCARRGEVTRVTAGQADILSGD*
Ga0134063_106072501	3300010335	Grasslands Soil	PFMLPKLAVPVPEEEHNRLMKCARRGEVTAITAGEDGLLAGDLG*
Ga0074044_103862152	3300010343	Bog Forest Soil	LRRLYRIEDGIPLMLARQAVPVPEEEHRRMMKCARRDEVTAITAGQADILASD*
Ga0126379_125326092	3300010366	Tropical Forest Soil	PLMLASQAVPVPEEEHHRLMKCARRGEVTAITAGQADILTGD*
Ga0136449_1003445763	3300010379	Peatlands Soil	LRRLYRIEDGIPLMLASQAVPVSEEEHRRLMKAAVTRITATPVT*
Ga0136449_1020750062	3300010379	Peatlands Soil	LRRLYRIENDIPLMLPKLAVPVSDEEHNRLMKCARRGEVTMITAGQADVLADDPV*
Ga0136449_1029325082	3300010379	Peatlands Soil	LRRLYRIENDIPLMLPKLAVPVSDEEHNRLMKCARRGEVTRITADQADVLADDPGVTR*
Ga0134126_122793481	3300010396	Terrestrial Soil	DIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEADILADELL*
Ga0134126_124744462	3300010396	Terrestrial Soil	LYRIENDIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAEMLADEML*
Ga0126361_106521631	3300010876	Boreal Forest Soil	DIPVMLPKLAVPVPDEEHERLMKCARRGEVTRITAGEADVLAD*
Ga0138514_1001093701	3300011003	Soil	DIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEADILADDLL*
Ga0137389_102683822	3300012096	Vadose Zone Soil	LYNPLLRRLYRIENDIPLMLPKLAVPVPDEEHNRLMKCARRGEVTKITAGQADVLADDLM
Ga0137382_113265051	3300012200	Vadose Zone Soil	MLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEPDMLADDVADDLA*
Ga0137376_114735321	3300012208	Vadose Zone Soil	RLYRIENDIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAEMLADELL*
Ga0137378_102550802	3300012210	Vadose Zone Soil	PKLAVPVPDEEHNRLMKCARRGEVTAITAGEADILADDLL*
Ga0137413_108883842	3300012924	Vadose Zone Soil	YRIEDDIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEADIGADDLL*
Ga0157378_120263401	3300013297	Miscanthus Rhizosphere	VPVPDEEHNRLMKCARRGEVTAITAGEAEMLADEMH*
Ga0157372_113550091	3300013307	Corn Rhizosphere	MLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAEMLADELL*
Ga0181532_100884801	3300014164	Bog	IPLMLPKLAVPVSDEEHNRLMKCARRGEVTRITADQADVLADDPGVTR*
Ga0157376_110356921	3300014969	Miscanthus Rhizosphere	RLYRIENDIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAGMLADELL*
Ga0137412_108919072	3300015242	Vadose Zone Soil	VPVPDEEHNRLMKCARRGEVTAITAGEADIGADDLL*
Ga0182035_101236832	3300016341	Soil	DGVPLMLAHQAVPVPEEEHHRLMKCARRGEVTAITAGQADILAGD
Ga0182039_110836841	3300016422	Soil	EDGIPLMLAHQAVPVPEEEHQRLVKCARRGEVTRVTAGQTDILGEDGMARPG
Ga0187820_10049533	3300017924	Freshwater Sediment	MLASQAVPVPEEEHHRLMKCARRGEVTAITAGQAGILTGD
Ga0187820_10562753	3300017924	Freshwater Sediment	ANQAVPVPEEEHQRLMACARRGEVTRATAGQADILSGD
Ga0187814_103660472	3300017932	Freshwater Sediment	ARQAVPVPEEEHNRLMKCARRGEVTAITAGQADILDGD
Ga0187801_100132921	3300017933	Freshwater Sediment	QAVPVPEEEHNRLMKCARRGEVTAITAGQADILDGD
Ga0187819_106050981	3300017943	Freshwater Sediment	PRLHRLYRIQDGVPLMLPRQAVPVPEEEHQRLMKCARRGEVTAITAGQGDIMAGD
Ga0187819_107283541	3300017943	Freshwater Sediment	LASQAVPVPEEEHNRLMKCARRGEVTAITAGQADILAD
Ga0187817_110181322	3300017955	Freshwater Sediment	GVPLMLANQAVPVPEEEHQRLLKCARRGEVTRITAGQMDILSGD
Ga0187783_111602771	3300017970	Tropical Peatland	MLPALAEPVPDEEHNRLVKCARRGQATSTAREAGLLAADEQTA
Ga0187781_104066921	3300017972	Tropical Peatland	NQAVPVPEEEHQRLMKCARRGEVARITAGQTDILGEDGS
Ga0187780_103264561	3300017973	Tropical Peatland	MLARQAVPVPEEDHNRLMKCARRGEVTAITAGGGEILGD
Ga0187883_103410631	3300018037	Peatland	KLAVPVSDEEHNRLMKCARRGEVTRITADQADVLADDPGVTR
Ga0187765_103145192	3300018060	Tropical Peatland	KDGVPVMLPKLAVPVPDEEHDRLMKCARRGEVTTITAGEPGVLADDLT
Ga0187765_109138912	3300018060	Tropical Peatland	LMLASQAVPVPEEEHHRLMKCARRGEVTAITASQADILTGD
Ga0187784_101327031	3300018062	Tropical Peatland	QAVPVPEEEHQRLMKCARRGEVARITAGQTDILGEDGS
Ga0187772_102233864	3300018085	Tropical Peatland	MRANQAVPVPDEGHQRLMKCARRGEVTRITADQADVLGDDRK
Ga0187772_105202682	3300018085	Tropical Peatland	RLYRIEDGIPLMLANQAVPVPEEEHQRLMGCARRGEVTRATAGQADILSGD
Ga0187769_106850211	3300018086	Tropical Peatland	EDGIPLMLANQAVPVPEEEHQRLVKCARRGEVTRITADEAGILGDEGR
Ga0187769_113320362	3300018086	Tropical Peatland	MLPKRAVPVPDEEHTRLLTCARRGEVTAITADEILADDLD
Ga0066669_102662101	3300018482	Grasslands Soil	PRLRRLYRIENDIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGETGILADELL
Ga0179594_100902791	3300020170	Vadose Zone Soil	VPVPDEEHNRLMKCARRGEVTAITAGEAEMLADELL
Ga0210403_107365191	3300020580	Soil	PKLAVPVPEEEHNRLMKCARRGEVTAITAGEDGLLAGDLGEPGDLGEPGDLG
Ga0210401_101930893	3300020583	Soil	RLRWLYRIEDGIPLMLASQAVAVPEQEHERLMRCARLGEVTAITAGQADVLAGD
Ga0210401_106580472	3300020583	Soil	RRLYRIENDIPFMLPKLAVPVPEEEHNRLMKCARRGEVTAITAGEPDMLADDVADDLA
Ga0210404_101685951	3300021088	Soil	FMLPKLAVPVPEEEHNRLMKCARRGEVTAITAGEDGLLADDLG
Ga0210405_105972822	3300021171	Soil	NDIPFMLPKLAVPVPEEEHNRLMKCARRGEVTAITAGEDGLLAGDLGEPGDLG
Ga0210396_113605072	3300021180	Soil	RLRRLYRIENDIPFMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEADLLADDLG
Ga0213882_104468871	3300021362	Exposed Rock	LPRQAVPVPDEEHNRLMKCARRGEVTTITAGDVLPDDLH
Ga0210393_107402102	3300021401	Soil	LYRIEDGIPLMLAHQAVPVPGEEHERLMKCARRGEASLTAGQDGTADD
Ga0210393_114766711	3300021401	Soil	RRLYRIENDVPLMLPRQAEPVPDEEHSRLMKCARLGQATVTAGESSLLAAD
Ga0210385_103157632	3300021402	Soil	DIPLLLPARAEPVPDEEHDRLMKCARRGEVTAITAGQSDVLAD
Ga0210397_100486311	3300021403	Soil	ASQAVAVPEQEHERLMRCARLGEVTAITAGQADVLAGD
Ga0210397_103165551	3300021403	Soil	KLAVPVPDEEHNRLMKCARRGEVTAITAGEADLLADDLG
Ga0210397_110799902	3300021403	Soil	NDIPFMLPKLAVPVPEEEHNRLMKCARRGEVTAITAGEDGLLADDLG
Ga0210383_115305861	3300021407	Soil	IPLMLANQAVAVPEQEHERLMRSARRGEVTAITAGQTDILAGE
Ga0210390_111348471	3300021474	Soil	RIEDGIPLMLASQAVAVPEQEHERLMRCARLGEVTAITTGQADVLAGD
Ga0210410_107161952	3300021479	Soil	NDIPFMLPKLAVPVPEEEHNRLMKCARRGEVTAITAGEDGLLAGGLG
Ga0247692_10083611	3300024279	Soil	LPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAGMLADELL
Ga0207699_108142532	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	PLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAGMLADEML
Ga0207645_102668322	3300025907	Miscanthus Rhizosphere	MLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAGMLADELL
Ga0207707_102753832	3300025912	Corn Rhizosphere	RLRRLYRIENEIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAGMLADELL
Ga0207693_104489321	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	PLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAGLLADDLI
Ga0207663_116056031	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	YRIENDIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAGLLADDLI
Ga0207652_105606722	3300025921	Corn Rhizosphere	PLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAGMLADELL
Ga0207687_115770862	3300025927	Miscanthus Rhizosphere	RRLYRIENDIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAGMLADELL
Ga0207664_105605991	3300025929	Agricultural Soil	MLPKLAVPVPEEEHNRLMKCARRGEVTAITAGEDGLLAGDLGEPGDLG
Ga0207690_106145542	3300025932	Corn Rhizosphere	IENDIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAEMLADEML
Ga0207658_116243922	3300025986	Switchgrass Rhizosphere	LYRIENDIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAGMLADDLL
Ga0207641_124634251	3300026088	Switchgrass Rhizosphere	KLAVPVPDEEHNRLMKCARRGEVTAITAGEAGMLADELL
Ga0209214_10370421	3300027071	Forest Soil	LRRLYRIENDIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEDGLLAGDLG
Ga0208488_10624031	3300027110	Forest Soil	PLMLADQAEPVPDEEHQRLMNRARRAEVTKITADQADILGGG
Ga0208608_1160301	3300027165	Forest Soil	LMLASQAVAVPEQEHERLMRCARLGEVTAITAGQADVLAGD
Ga0209248_102633932	3300027729	Bog Forest Soil	PRLRWLYRIEDGIPLMLASQAVPVPEQEHERLVRCARRGEVTAITAGQADMLAGD
Ga0209166_106737372	3300027857	Surface Soil	YRIDDGIPLMLANQAVAVAEEEHERLLRCARRGEVTAITAGHADILAGD
Ga0209275_104979902	3300027884	Soil	DGIPLMLAKQAVPVPEEEHQRLMKCARRGEVTRITAGQADILDC
Ga0307282_101416231	3300028784	Soil	LAVPVPDEEHNRLMKCARRGEVTAITAGEADIGADDLL
Ga0307312_100739613	3300028828	Soil	MLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEADIGADDLL
Ga0311340_100715837	3300029943	Palsa	IEDGIPLMLASEAVPVPEQEHERLMTCARRGEVTAITAGQANVLGGG
Ga0310037_103031761	3300030494	Peatlands Soil	PLMLARQAVPVPDEEHNRLMKCARRGEVTAITAGQADILADD
Ga0307482_12590531	3300030730	Hardwood Forest Soil	PVMLADQAVPVPDEEHIRLMKCAGRDEVTAITGGEQDILAGYPRL
Ga0307499_101195842	3300031184	Soil	PVPDEEHNRLMKCARRGEVTAITAGEAGMLADEML
Ga0307495_100027011	3300031199	Soil	PVPDEEHNRLMKCARRGEVTAITAGEADILADDLL
Ga0318516_100180162	3300031543	Soil	MLAHQAVPVPEEEHHRLMKCARRGEVTAITAGQADILAGD
Ga0318571_101186091	3300031549	Soil	MLAHQAVPVPEEEHHRLMKCARRGGVTAITAGQADILAGD
Ga0318573_103338182	3300031564	Soil	HQAVPVPEEEHQRLVKCARRGEVTRVTAGQTDILGEDGMARPG
Ga0318515_100045572	3300031572	Soil	VPLMLAHQAVPVPEEEHHRLMKCARRGEVTAITAGQADILAGD
Ga0318515_105842031	3300031572	Soil	LMLASQAVPVPEEEHNRLMKCARRGEVSAITAGQADILTGD
Ga0318496_108536892	3300031713	Soil	VPVPDEEHNRLMKCARRGEVTTITAGEADVLAGVLADGLA
Ga0307474_101779071	3300031718	Hardwood Forest Soil	YRIEDDVPVMLADQAVPVPDEEHIRLMKCAGRDEVTAITGGEQDILAGYPRL
Ga0318500_102834022	3300031724	Soil	LMLPKLAVPVPDEEHNRLMKCARRGEVTTITAGEELTGELA
Ga0307468_1018586621	3300031740	Hardwood Forest Soil	PVPDEEHNRLMKCARRGEVTAITAGEAEMLADELL
Ga0318494_102379032	3300031751	Soil	IENGIPLMLPKLAVPVPDEEHNRLMKCARRGEVTTITAGEELTGELA
Ga0318554_104192131	3300031765	Soil	TDIPQMLPKLAAPVPDEEHNRLMKCARRGEVTAITAGEAGVLAGEVQP
Ga0318521_103956242	3300031770	Soil	LASQAVPVPEEEHNRLMKCARRGEVSAITAGQADILTGD
Ga0318508_10697172	3300031780	Soil	MLAHQAVPVPEEEHHRLMKCARRGEVTAITAGQADILTGD
Ga0318552_101643051	3300031782	Soil	IQDGIPLMLAHQAVPVPEEEHHRLMKCARRGEVTAITAGQADILAGD
Ga0318552_101681232	3300031782	Soil	MLADQAVPVPEEEHHRLMKCARRGGVTAITAGQADILAGD
Ga0318552_102529321	3300031782	Soil	PQMLPKLAAPVPDEEHNRLMKCARRGEVTAITAGEAAVLAGEVQP
Ga0318552_103079792	3300031782	Soil	LMLAHQAVPVPEEEHQRLMKCARRGEVTAITAGQGDIMAGD
Ga0318576_102614652	3300031796	Soil	QAVPVPEEEHNRLMKCARRGEVSAITAGQADILTGD
Ga0318565_101805531	3300031799	Soil	PRLRRLYRIQDGVPLMLASQAVPVPEEEHNRLMKCARRGEVSAITAGQADILTGD
Ga0318565_103597241	3300031799	Soil	IPQMLPKLAVPVPDEEHNRLMKCARRGEVTTITAGEADVMAGMLADGLA
Ga0318517_101122622	3300031835	Soil	MLAHQAVPVPEREHQRMVKCARRGEVTRITAGQTDILGDDRN
Ga0318512_102500271	3300031846	Soil	QMLPKLAVPVPDEEHNRLMKCARRGEATAITAGEVLAGDV
Ga0306919_101424712	3300031879	Soil	LAHQAVPVPEEEHHRLMKCARRGEVTAITAGQADILAGD
Ga0306921_105387661	3300031912	Soil	AVPVPEEEHNRLMKCARRGEVSAITAGQADILTGD
Ga0318569_105136822	3300032010	Soil	NDIPQMLPKLAVPVPDEEHNRLMKCARRGEATAITAGEVLAGDV
Ga0318558_104238331	3300032044	Soil	PRLRRLYRIENDIPQMLPKLAVPVPDEEHNRLMKCARRGEVTTITAGEELTGELA
Ga0318506_103092962	3300032052	Soil	HQAVPVPEREHQRMVKCARRGEVTRITAGQTDILGDDRN
Ga0318504_104195562	3300032063	Soil	YRIDNGIPLMLPKLAVPVPDEEHNRLMKCARRGEVTTITAGEELTGELA
Ga0318513_105298791	3300032065	Soil	RIENGIPLMLPKLAVPVPDEEHNRLMKCARRGEVTTITAGEELTGELA
Ga0318524_102785451	3300032067	Soil	VPLMLARQAVPVPEEEHNRLMKCARRGEVTAITAGQADILAGD
Ga0318553_103392081	3300032068	Soil	IENDIPQMLPKLAAPVPDEEHNRLMKCARRGEVTAITAGEAAVLAGEVQP
Ga0311301_114001972	3300032160	Peatlands Soil	QAVPVPEEEHHRLMKCARRGEVTAITADQKDILDD
Ga0307470_112860931	3300032174	Hardwood Forest Soil	PVPDEEHNRLMKCARRGEVTAITAGEAGMLADELL
Ga0307472_1010484301	3300032205	Hardwood Forest Soil	RRLYRIENDIPFMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAGILAEDLI
Ga0306920_1028771162	3300032261	Soil	RIENDIPRMLPKLAVPVPDEEHNRLMKCARRGEVTAITAPAPDVLADVLADVLADVMADGPA
Ga0335085_107796541	3300032770	Soil	PKLAVPVPDEEHNRLMKCARRGEVTAITAGEADIGADDLRLS
Ga0335080_121321672	3300032828	Soil	RIENDIPLMLPKHAVPVPDEEHNRLMKCARRGEVTTITSGDVLTDDLD
Ga0335083_105670391	3300032954	Soil	LYRIENDIPQMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEVLADDIEPLALS
Ga0335073_107741714	3300033134	Soil	RLRRLYRIQDGVPLMLARQAVPVPEEEHNRLMKCARRGEVTAITADQADLLADD
Ga0370514_078506_672_836	3300034199	Untreated Peat Soil	RRRWLYRIEDGIPLMLASEAVPVPEQEHERLMTCARRGEVTAITAGQANVLGGG
Ga0373948_0104787_515_670	3300034817	Rhizosphere Soil	YRIENEIPLMLPKLAVPVPDEEHNRLMKCARRGEVTAITAGEAGMLADELL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041467

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences