Metagenome / Metatranscriptome Family F041354

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041354
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	77 residues
Representative Sequence	MTVVLISGGLTFLVGLLILRPFSVTDGRLRARAHTPDDDRRRELLRQLRDLDDDLAAGKLTQDDHARLRDPVERKAAA
Number of Associated Samples	101
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	97.50 %
% of genes from short scaffolds (< 2000 bps)	90.62 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.250 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (53.750 % of family members)
Environment Ontology (ENVO)	Unclassified (67.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (54.375 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.43% β-sheet: 0.00% Coil/Unstructured: 40.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF03918	CcmH	76.88
PF00578	AhpC-TSA	11.88
PF16327	CcmF_C	6.25
PF08534	Redoxin	0.62
PF01578	Cytochrom_C_asm	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG3088	Cytochrome c-type biogenesis protein CcmH/NrfF	Posttranslational modification, protein turnover, chaperones [O]	76.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.25 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.25 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.25 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	25.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	21.25 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	16.25 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	15.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.25 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	15.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.25 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	15.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.25 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	13.75 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.25 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Nocardioides sp. JS614	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	13.12 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.25 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.25 %
Nocardioides sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	0.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8725279	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1641	Open in IMG/M
3300000890\|JGI11643J12802_10353446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	1429	Open in IMG/M
3300004268\|Ga0066398_10139777	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005332\|Ga0066388_100276862	All Organisms → cellular organisms → Bacteria	2320	Open in IMG/M
3300005332\|Ga0066388_100484976	All Organisms → cellular organisms → Bacteria	1874	Open in IMG/M
3300005332\|Ga0066388_106359158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	596	Open in IMG/M
3300005332\|Ga0066388_106648923	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300005344\|Ga0070661_100399602	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300005363\|Ga0008090_15799193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	587	Open in IMG/M
3300005435\|Ga0070714_100007237	All Organisms → cellular organisms → Bacteria	8620	Open in IMG/M
3300005575\|Ga0066702_10972757	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300005713\|Ga0066905_101302428	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005764\|Ga0066903_100875010	All Organisms → cellular organisms → Bacteria	1621	Open in IMG/M
3300005764\|Ga0066903_102823558	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300005764\|Ga0066903_105580008	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300005764\|Ga0066903_106943472	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300005764\|Ga0066903_108098307	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300006031\|Ga0066651_10689661	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300006175\|Ga0070712_100145743	All Organisms → cellular organisms → Bacteria	1812	Open in IMG/M
3300006914\|Ga0075436_100812971	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300010048\|Ga0126373_10193196	All Organisms → cellular organisms → Bacteria	1967	Open in IMG/M
3300010048\|Ga0126373_12588003	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300010048\|Ga0126373_12902976	Not Available	535	Open in IMG/M
3300010048\|Ga0126373_12929480	Not Available	532	Open in IMG/M
3300010154\|Ga0127503_10256682	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300010359\|Ga0126376_10136882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1939	Open in IMG/M
3300010359\|Ga0126376_12600620	Not Available	555	Open in IMG/M
3300010361\|Ga0126378_10151363	All Organisms → cellular organisms → Bacteria	2362	Open in IMG/M
3300010361\|Ga0126378_10792426	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300010361\|Ga0126378_11329753	Not Available	813	Open in IMG/M
3300010361\|Ga0126378_11442851	Not Available	780	Open in IMG/M
3300010362\|Ga0126377_13024229	Not Available	543	Open in IMG/M
3300010366\|Ga0126379_10235654	All Organisms → cellular organisms → Bacteria	1790	Open in IMG/M
3300010366\|Ga0126379_10599525	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1187	Open in IMG/M
3300010366\|Ga0126379_10743620	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1077	Open in IMG/M
3300010366\|Ga0126379_12353732	Not Available	632	Open in IMG/M
3300010373\|Ga0134128_12732208	Not Available	544	Open in IMG/M
3300010376\|Ga0126381_103403283	Not Available	626	Open in IMG/M
3300010398\|Ga0126383_11848768	Not Available	692	Open in IMG/M
3300010398\|Ga0126383_12533941	Not Available	597	Open in IMG/M
3300012212\|Ga0150985_101146450	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300014497\|Ga0182008_10392017	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300014497\|Ga0182008_10865105	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300016294\|Ga0182041_11562318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	608	Open in IMG/M
3300016319\|Ga0182033_10383411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	1184	Open in IMG/M
3300016341\|Ga0182035_11650191	Not Available	579	Open in IMG/M
3300016357\|Ga0182032_11726408	Not Available	546	Open in IMG/M
3300016387\|Ga0182040_10319451	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300016387\|Ga0182040_11440198	Not Available	584	Open in IMG/M
3300016445\|Ga0182038_11170547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	685	Open in IMG/M
3300021560\|Ga0126371_11347900	Not Available	846	Open in IMG/M
3300021560\|Ga0126371_13254204	Not Available	549	Open in IMG/M
3300025915\|Ga0207693_10148360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1844	Open in IMG/M
3300025920\|Ga0207649_10331107	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300027654\|Ga0209799_1031761	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300027654\|Ga0209799_1103122	Not Available	648	Open in IMG/M
3300027874\|Ga0209465_10074943	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300031543\|Ga0318516_10532415	Not Available	673	Open in IMG/M
3300031543\|Ga0318516_10617261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	618	Open in IMG/M
3300031544\|Ga0318534_10817993	Not Available	523	Open in IMG/M
3300031545\|Ga0318541_10421555	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	746	Open in IMG/M
3300031546\|Ga0318538_10522340	Not Available	644	Open in IMG/M
3300031549\|Ga0318571_10078367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	1044	Open in IMG/M
3300031564\|Ga0318573_10020437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2975	Open in IMG/M
3300031573\|Ga0310915_10081395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	2154	Open in IMG/M
3300031573\|Ga0310915_10289758	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300031640\|Ga0318555_10578610	Not Available	608	Open in IMG/M
3300031680\|Ga0318574_10158949	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300031681\|Ga0318572_10736977	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300031682\|Ga0318560_10566248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	615	Open in IMG/M
3300031723\|Ga0318493_10721350	Not Available	559	Open in IMG/M
3300031724\|Ga0318500_10444498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	648	Open in IMG/M
3300031736\|Ga0318501_10162595	All Organisms → cellular organisms → Bacteria	1154	Open in IMG/M
3300031736\|Ga0318501_10633465	Not Available	588	Open in IMG/M
3300031744\|Ga0306918_10450530	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300031744\|Ga0306918_10962158	Not Available	664	Open in IMG/M
3300031744\|Ga0306918_11356089	Not Available	546	Open in IMG/M
3300031747\|Ga0318502_10273436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	990	Open in IMG/M
3300031747\|Ga0318502_10635068	Not Available	644	Open in IMG/M
3300031751\|Ga0318494_10703860	Not Available	591	Open in IMG/M
3300031751\|Ga0318494_10869887	Not Available	528	Open in IMG/M
3300031763\|Ga0318537_10135345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	917	Open in IMG/M
3300031765\|Ga0318554_10779039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	535	Open in IMG/M
3300031769\|Ga0318526_10308454	Not Available	647	Open in IMG/M
3300031770\|Ga0318521_10172160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	1239	Open in IMG/M
3300031771\|Ga0318546_10471143	Not Available	880	Open in IMG/M
3300031778\|Ga0318498_10050809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1840	Open in IMG/M
3300031778\|Ga0318498_10337629	Not Available	673	Open in IMG/M
3300031778\|Ga0318498_10447874	Not Available	571	Open in IMG/M
3300031778\|Ga0318498_10530531	Not Available	517	Open in IMG/M
3300031779\|Ga0318566_10145224	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300031779\|Ga0318566_10467164	Not Available	619	Open in IMG/M
3300031779\|Ga0318566_10497311	Not Available	597	Open in IMG/M
3300031779\|Ga0318566_10577853	Not Available	548	Open in IMG/M
3300031780\|Ga0318508_1004404	All Organisms → cellular organisms → Bacteria	2866	Open in IMG/M
3300031781\|Ga0318547_10711436	Not Available	624	Open in IMG/M
3300031782\|Ga0318552_10050757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1965	Open in IMG/M
3300031782\|Ga0318552_10182786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	1059	Open in IMG/M
3300031782\|Ga0318552_10459991	Not Available	649	Open in IMG/M
3300031782\|Ga0318552_10641221	Not Available	542	Open in IMG/M
3300031792\|Ga0318529_10266761	Not Available	797	Open in IMG/M
3300031793\|Ga0318548_10027680	All Organisms → cellular organisms → Bacteria	2461	Open in IMG/M
3300031795\|Ga0318557_10097635	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300031797\|Ga0318550_10320885	Not Available	751	Open in IMG/M
3300031797\|Ga0318550_10395157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	669	Open in IMG/M
3300031799\|Ga0318565_10364253	Not Available	701	Open in IMG/M
3300031799\|Ga0318565_10546260	Not Available	558	Open in IMG/M
3300031805\|Ga0318497_10482187	Not Available	695	Open in IMG/M
3300031805\|Ga0318497_10681048	Not Available	577	Open in IMG/M
3300031821\|Ga0318567_10025082	All Organisms → cellular organisms → Bacteria	2925	Open in IMG/M
3300031821\|Ga0318567_10610623	Not Available	619	Open in IMG/M
3300031833\|Ga0310917_10276161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1134	Open in IMG/M
3300031846\|Ga0318512_10120638	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1247	Open in IMG/M
3300031860\|Ga0318495_10048307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	1881	Open in IMG/M
3300031860\|Ga0318495_10132759	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300031860\|Ga0318495_10317803	Not Available	692	Open in IMG/M
3300031890\|Ga0306925_10405385	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1461	Open in IMG/M
3300031890\|Ga0306925_12047824	Not Available	538	Open in IMG/M
3300031893\|Ga0318536_10018404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	3134	Open in IMG/M
3300031894\|Ga0318522_10267039	Not Available	649	Open in IMG/M
3300031896\|Ga0318551_10027662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	2713	Open in IMG/M
3300031896\|Ga0318551_10385349	Not Available	796	Open in IMG/M
3300031912\|Ga0306921_10963438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	965	Open in IMG/M
3300031912\|Ga0306921_11052010	Not Available	915	Open in IMG/M
3300031945\|Ga0310913_10486867	Not Available	876	Open in IMG/M
3300031947\|Ga0310909_10019472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	4863	Open in IMG/M
3300031954\|Ga0306926_10484724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1521	Open in IMG/M
3300031954\|Ga0306926_11196194	Not Available	893	Open in IMG/M
3300031954\|Ga0306926_12606529	Not Available	551	Open in IMG/M
3300031954\|Ga0306926_12852455	Not Available	521	Open in IMG/M
3300031959\|Ga0318530_10037933	All Organisms → cellular organisms → Bacteria	1765	Open in IMG/M
3300032008\|Ga0318562_10200138	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300032010\|Ga0318569_10395789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	644	Open in IMG/M
3300032010\|Ga0318569_10569084	Not Available	528	Open in IMG/M
3300032025\|Ga0318507_10016814	All Organisms → cellular organisms → Bacteria	2529	Open in IMG/M
3300032025\|Ga0318507_10366871	Not Available	627	Open in IMG/M
3300032035\|Ga0310911_10329776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	880	Open in IMG/M
3300032041\|Ga0318549_10044575	All Organisms → cellular organisms → Bacteria	1810	Open in IMG/M
3300032043\|Ga0318556_10431162	Not Available	690	Open in IMG/M
3300032044\|Ga0318558_10478051	Not Available	622	Open in IMG/M
3300032052\|Ga0318506_10293176	Not Available	721	Open in IMG/M
3300032054\|Ga0318570_10125991	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300032054\|Ga0318570_10163354	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300032063\|Ga0318504_10078211	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300032066\|Ga0318514_10645787	Not Available	563	Open in IMG/M
3300032067\|Ga0318524_10479445	Not Available	652	Open in IMG/M
3300032068\|Ga0318553_10683282	Not Available	537	Open in IMG/M
3300032076\|Ga0306924_12087994	Not Available	581	Open in IMG/M
3300032089\|Ga0318525_10573649	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300032090\|Ga0318518_10192146	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300032094\|Ga0318540_10112071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1290	Open in IMG/M
3300032094\|Ga0318540_10340961	Not Available	724	Open in IMG/M
3300032126\|Ga0307415_100229118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	1495	Open in IMG/M
3300032261\|Ga0306920_100070719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. JS614	5113	Open in IMG/M
3300032261\|Ga0306920_102872577	Not Available	654	Open in IMG/M
3300032261\|Ga0306920_103726324	Not Available	559	Open in IMG/M
3300033290\|Ga0318519_10304809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	933	Open in IMG/M
3300033290\|Ga0318519_10472152	Not Available	753	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.62%
Host-Associated	Host-Associated	4.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.00%
Plants	Host-Associated → Plants	4.38%
Aquatic	Environmental → Aquatic	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.75%
Freshwater	Environmental → Aquatic → Freshwater	0.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.38%
Loam	Environmental → Terrestrial → Soil → Loam	10.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.25%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	67.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.75%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.25%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.62%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	53.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.25%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.25%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.62%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.62%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.62%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_03351740	2088090015	Soil	VTALLVIGGLAFVVVLLIVRPLSNGRGRLHVRATTSDEDRRRELLRQLRDLDDDLAAGKLTAVDHERLRDPIEREATXGKRPPS
JGI11643J12802_103534461	3300000890	Soil	VTALLVIGGLAFVVVLLIVRPLSNGRGRLHVRATTSDEDRRRELLRQLRDLDDDLAAGKLTAVDHERLRDPIEREAAAVLSRIKN
Ga0066398_101397771	3300004268	Tropical Forest Soil	MTVVLISGGLTFVVGLLILRPFSATDGHPQIRAHTPDDDRRRELLRQLRDLDDDLAAGKLTPADHLRLRDPVEREA
Ga0066388_1002768621	3300005332	Tropical Forest Soil	MTVVLLSGGLTFLVGLLVFRPFSVTDGRVRARAAAPEDDRRRELLRQLRDLDDDL
Ga0066388_1004849761	3300005332	Tropical Forest Soil	MTVVILAGALTFVVGLLILRPYSGKAGRPQVRGHDPGDERRRALLRQLRDLDDDLAAGKLTASDHTRLREPVEREAAAVLTRKARGPAGGIGGGRSGPPSGPATP
Ga0066388_1063591581	3300005332	Tropical Forest Soil	MTAVIITGGLTFVVGLLILRPFSAKGGLLHVRAYNPDDDRRRELLRQLRDLDDDLDAGKLTQADHVRLRDP
Ga0066388_1066489231	3300005332	Tropical Forest Soil	MTVVVISGALTFVIGLLILRPLSVTDRRLQLRAHAPDDDHRRELLRQLRDLDDDLAAGKLTAGDHVRLRDPVEREAAAVLHRKTQG
Ga0070661_1003996021	3300005344	Corn Rhizosphere	MIAILIVAGLTFVVGLLVLRPFAAARGPRQIRIQTSDEVRRRELLRQLRDLDDDLAAGKLTDADHARL
Ga0008090_157991932	3300005363	Tropical Rainforest Soil	MTVVLLSGGLTFLVGLLILRPFSVPGSRLRVRADVPDDDRRRELLRQLRDLDDDLAAGKLTRDDHARLRD
Ga0070714_10000723712	3300005435	Agricultural Soil	MTVVIIAGALTFAVGLLILRPFSGKAGRMQGRGHDPDDGRRRALLRQLRDLDDDLAAGKLTAGDHIRLREPVEREAAAAL
Ga0066702_109727571	3300005575	Soil	MTVVLLSGGLTFVVGLLIVRPFSATGRPQVRIPAPDADHRRELLRQLRDLDDDLAAGKLTAGDHARLRDPVEREAAEV
Ga0066905_1013024282	3300005713	Tropical Forest Soil	MTVVFISGGLTFVVGLLILRPFSVTGGGLQAPAPNPADDRRRELLRQLRDLDDDLAAGKLTNDDHARLRDPVEREAAAVLPRRTPRPAGGTGMAASRMRSGPPAA
Ga0066903_1008750101	3300005764	Tropical Forest Soil	MTVVIIAGALTFVLGLLILRPFVGKAGRPQARGHDPEEDHRRALLRQLRDLDDDLAAGKLAAGDHTRLREPVERETAAALSRKAQGPAGGIGGGRSG
Ga0066903_1028235581	3300005764	Tropical Forest Soil	MTVVILAGVLTFVVGLLILRPFSGKAGRPQVRGHDPDDDRRRALLRQLRDLDDDLAAGKLTAGDHTRLRE
Ga0066903_1055800081	3300005764	Tropical Forest Soil	MTVVVISGGLTFVIGLLILRPLSATDGRLRLRARAPDDDRGRELLRQLRDLDDDLAAGKLTADDHVRLRGPVEREAAAVLHRKTQGPTGETGAGTPSTS
Ga0066903_1069434722	3300005764	Tropical Forest Soil	MTVVLLSGALTFLVGLLILRPFSVTGSRLRVRPHAPDDDRRRELLRQLRDLDDDLAAGKLTRDDHARLRDPVEREAATVLGRKAGGT
Ga0066903_1080983072	3300005764	Tropical Forest Soil	MTVVVISGGLTFVIGLLILRPLSATDGHLRLPAHAPDGDRVRELLRQLRDLDDDLAAGKLTAGDHVRLRDPVEREAAAILSRKPQGLAGEPGAVTSTTPPGSA
Ga0066651_106896611	3300006031	Soil	MTVVIIAGALTFVVGLLIMRPFSGKAGRPQVPGHDPDDDRRRELLRQLRDLDDDLAAGKLTAGDHIRLREPVEREAAAVLRRKAQGPAGEAGGGRSGAPSGP
Ga0070712_1001457434	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTVVIIAGALTFAVGLLILRPFSGKAGRMQGRGHDPDDGRRRALLRQLRDLDDDLAAGKLTAGDHIRLREPVEREA
Ga0075436_1008129711	3300006914	Populus Rhizosphere	MTVVILAGALTFVVGLLILHPFSGKAGRPQVRGHDPDDDRRRALLRQLRDLDDDLAAGKLTADDHTRLREPVEREAAAALTRKAGGPAG
Ga0126373_101931965	3300010048	Tropical Forest Soil	MTVVLISGGLTFVVGLLIMRPLPASVGRLHMGVGDPDDARRRELLRQLRDLDDDLAAG
Ga0126373_125880032	3300010048	Tropical Forest Soil	MTVAILAGALTFVVGLLILRPYPGKAGRPQVRGPDPDDDRRRALLRQLRDLDDDLAAG
Ga0126373_129029762	3300010048	Tropical Forest Soil	MTVVILAGALTFVVGLLILRPFSGKAGRPQVRGHDPDDDRRRALLRQLRDLDDDLAAGKLTAGDHTRLREPVEREAAAVLTRKARGPAGGIG
Ga0126373_129294801	3300010048	Tropical Forest Soil	MTVVLLSGGLTFVVGLLVLRPFSATDGRLPVRAHTPDDDRRLELLRQLRDLDDDLAAGKLSQADHARLRDP
Ga0127503_102566824	3300010154	Soil	MTVVLLSGGLTFLVGLLILRPFSAADGRLRVRAHAPDDDRRRELLRQLRDLDDDLAAGKLTQD
Ga0126376_101368821	3300010359	Tropical Forest Soil	MTVVILAGVLTFVVGLLILRPFSGKAGRPQVRGHDPDDDHHRALLRQLRDLDDDLAAGKLTADDHTRLREPVEREAAAA
Ga0126376_126006202	3300010359	Tropical Forest Soil	MTVVLITGGLAFIVGLLIFGPFWAAGDRLQVRAHAPDDSRRRELLRQLRDLDDDLAAGKLTQADHIRLRGPVEQEAVAVLSPAKTAPADEVPRRAGKKT
Ga0126378_101513634	3300010361	Tropical Forest Soil	MTVVFISGGLTFVVGLLILRPFSVTGGGLQAPAPTPADDRRRELLRQLRDLDDDLAAGKLTNDDHARLRDPVEREAAAVL
Ga0126378_107924263	3300010361	Tropical Forest Soil	VTAVLISGGLTFVVGLLILGPFSITGRRPVVSARTADDGRRRELLRQLGDLDDDLAAGKLTQADHTRLRGPVEREAAAVLSEAPPATASSQKAGD
Ga0126378_113297531	3300010361	Tropical Forest Soil	MTVVLIVGGLTFLVGLLILRPFSVTGGRLRVRAHSPDDDRRRELLRQLRDLDDDLA
Ga0126378_114428511	3300010361	Tropical Forest Soil	MTVVLLSGGLTFVVGLLILRPFSAADGRLHEQAYTPNDDRRRELLRQLRDLDDDLAAGKLTQADHARLRDPVEREAAA
Ga0126377_130242292	3300010362	Tropical Forest Soil	MTVVLISGGLTFVVGLLILRPFSGTGGHLHVRAHTPDDDRRRELLRQLCDLDDDLAAGKLTQADHARLRAPVEREAAAVLL
Ga0126379_102356544	3300010366	Tropical Forest Soil	MTVVVISGGLTFVIGLLILRPLSVTDGRLRLQAHAPDDDRRRELLRQLRDLDDDLAADKLTAGDHARLR
Ga0126379_105995251	3300010366	Tropical Forest Soil	MTIVILAGALTFVVGLLILHPFSGKADRPQVRGHDPDDDHRRALLRQLRDLDDDLAAGKLTADDHTRLREPVEREAATALSRKAQGPVGGIGGGRSGTPSGP
Ga0126379_107436203	3300010366	Tropical Forest Soil	MTVVILAGVLTFVVGLLILRPFSGKAGRPQVRGHDPDDDRRRALLRQLRDLDDDLAAGKLTAG
Ga0126379_123537322	3300010366	Tropical Forest Soil	MTVVLLSGGLTFLVGLLILRPFSVTDGRLHVRADAPDDDRRRELLRQLRDLDDDLAAGKLTRDDHARLRDPVEREAAAFLARKAQRPAGGTAAV
Ga0134128_127322082	3300010373	Terrestrial Soil	MIIVIITGVLTFAVGLLIMRPLAAGGHRPPDRAATAGDTRRRELLRQLRDLDDDLADGKLAEDDHARLRAPVAREAA
Ga0126381_1034032832	3300010376	Tropical Forest Soil	MTVVLVSGGLTFVVGLLILRPFSITGGRLQVRTHTPDDGRPRELLRQLRDLDDDLAAGKLTQADHVRLRGPV
Ga0126381_1034227991	3300010376	Tropical Forest Soil	MTVVVISGGLTFVIGLLILRPLSAADGRMRLRAHAPDDDRRRELLRQLR
Ga0126383_118487682	3300010398	Tropical Forest Soil	MTVVLLSGGLTFLVGLLVFRPFSVTDGRVRARAAAPEDDRRRELLRQLRDLDDDLAAGKL
Ga0126383_125339412	3300010398	Tropical Forest Soil	MTVVFISGGLTFLVGLLILRPFSAPDGRLCVRAHTPDDDRRRELLRQLRDLDDDLAAGKLTQDDHAWLRD
Ga0150985_1011464503	3300012212	Avena Fatua Rhizosphere	MIAVLIVGALTFVVGLLILRPFASVRRPPPTRIRTSDEVRRRELLRQLRDLDDDRASGKLTEADHSRLRGPVEREAAAALRRV
Ga0182008_103920172	3300014497	Rhizosphere	MIALLIVAGLTFVVGLLILRPFASARGHGNVRTRSADEVRRRELLRQLRDLDDDRAAGKLTDADHARLRE
Ga0182008_108651051	3300014497	Rhizosphere	MIAVLIVGGLTFVVGLLVLRPFASARRYRPVRTRTEPEVRRRELLRQLRDLDDDRAAGKLTDADHARLREPVERAA
Ga0182041_115623181	3300016294	Soil	MTVVLLSGGLTFLVGLLILRPFSVAGSRLRVRAHAPDDDRRRELLRQLRDLDDDLAAGKLTS
Ga0182033_103834113	3300016319	Soil	MTVVLISGGLTFVTGLLIARPFSVTGGRLHIRAHTADDDRRRALLRQLRDLDDDLAAGKLTQADH
Ga0182035_116501912	3300016341	Soil	MTIVVISGVLTFVIGLLIMRPLSAPAGRLQLRARAPDDDRGRELLRQLRDLDDDLAAGKLTADDHVRLR
Ga0182032_117264082	3300016357	Soil	MTVVLITGGLTFVVGLLIFRPLSVTGGRLHIRAHTPDDDRRRALLRQLRDLDDDLAAGKLTEA
Ga0182040_103194513	3300016387	Soil	MTVVLISGGLTFLVGLLILRPFSVTERRLRVQVHTLDDDRRRELLRQLRDLDDDLAAGKLTQDDHARLRDPVERTAAAVLGRKAQRPAGSA
Ga0182040_114401981	3300016387	Soil	MTVVIIAGALTFTLGLLILGPFPGKAGRPQARGDDPEDDHRRALLRQLRDLDDDLAAGKLAADDHTRLREPVEREAAALVTA
Ga0182038_111705472	3300016445	Soil	MTVVLISGGLTFVIGLLIARPFSVTGGRLHIRAHTADDDRRRALLRQLRDLDDDLAAG
Ga0126371_113479001	3300021560	Tropical Forest Soil	MTVMVISGGLTFVIGLLILRPLSATDGRLRLRAHAPDDDRRRELLRQLRDLDDDLAAGKLTADDH
Ga0126371_132542041	3300021560	Tropical Forest Soil	MTVVLLSGGLTFLVGLLILRPFSVTDGRLHVRADAPDDDRRRELLRQLRDLDDDLAAGKLTRDDHARLRDPVEREAAT
Ga0207693_101483601	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTVVIIAGALTFAVGLLILRPFSGKAGRMQGRGHDPDDGRRRALLRQLRDLDDDLAAGKLTAGDHIRLREPVEREAAAA
Ga0207649_103311071	3300025920	Corn Rhizosphere	MIAILIVAGLTFVVGLLVLRPFAAARGPRQIRIQTSDEVRRRELLRQLRDLDDDLAAGKLTDADHARLRQPV
Ga0209799_10317611	3300027654	Tropical Forest Soil	MTVVLISGGLTFVVGLLILRPFSATDGHPQIRAHTPDDDRRRELLRQLRDLDDDLAAGKLTPADHLRLR
Ga0209799_11031221	3300027654	Tropical Forest Soil	MTVVLISGGLTFLVGLLILRPFSVAGGRLDVRAHTPDDNRRRELLRQLRDLDDDLAAGKLTQDDHIRLRDPVEREAAAFLGRKARRPALFASGE
Ga0209465_100749431	3300027874	Tropical Forest Soil	MTVVLLSGGLTFLVGLLVFRPFSVTDGRVRARAAAPEDDRRRELLRQLRDLDDDLAAGKLTQ
Ga0318516_105324151	3300031543	Soil	MTVVLLSGGLTFLVGLLILRPLSVTGTRLRVRAHAPDGDRRREFLRQLRDLDDDLAAGKLTRDDHTRLHG
Ga0318516_106172612	3300031543	Soil	MTVVLLSGGLTFLVGLLILRPFSVAGSRMRVRAYAPDDDRRRELLRQLRDLDDDLAVGKLTRDDYARLR
Ga0318534_108179931	3300031544	Soil	MTVVLLSGGLTFLAGLLLFRPFSVTGGHLRVRASAPEDDRRRELLRQLRDLDDDLMAGKLTRDDHARL
Ga0318541_104215552	3300031545	Soil	MTVVLISGGLTFVIGLLIARPFSVTGGRLHIRAHTADDDRRRALLRQLRDLDDDLAAGKLTQ
Ga0318538_105223401	3300031546	Soil	MTVVLISGGLTFLVGLLILRPFSVTDGRLRARAHTPDDDRRRELLRQLRDLDDDLAAGKLTQDDHARLRDPVEREAAAVLGRKAQRPAGRTA
Ga0318571_100783673	3300031549	Soil	MTVVLITGGLTFVVGLLIFRPLSVTGGRLHIRAHTPDDDRRRALLRQLRDLDDDLAAGKLTEADRVRLR
Ga0318573_100204374	3300031564	Soil	MTVVFISGGLTLVVGLLIMRPFSVTGGRMHVRSHTPDDDRRRELLRQLRDLDDDLAAGKLTQADHIRL
Ga0310915_100813951	3300031573	Soil	MTVVLISGGLTFVIGLLIARPFSVTGGRLHIRAHTADDDRRRALLRQLRDLDDDLAAGKLTQADHIRL
Ga0310915_102897581	3300031573	Soil	MTVVLISGGLTFLVGLLILRPFSVTERRLRVQVHTPDDDRRRELLRQLRDLDDDLAAGKLTQ
Ga0318555_100506794	3300031640	Soil	MTVVLISGGLTFLVGLLILRPFSVTDGRLRARAHTPDDDRRRELLRQLRDLDDDLA
Ga0318555_105786102	3300031640	Soil	MTVVLISGGLTFLVGLLILRPFSVTERRLRVQVHTLDDDRRRELLRQLRDLDDDLAAGKLTQDDHA
Ga0318574_101589493	3300031680	Soil	MTVVLLSGGLTFLVGLLILRPFSVAGSRMRVRAYAPDDDRRRELLRQLRDLDDDLAVGKLTRDDYARLRDPVE
Ga0318572_107369773	3300031681	Soil	MTVVVISGGLTFVIGLLILRPFSVSGGRPQVRSHTPDDDRRRALLRQLRDLDDDLAAGKLTEADHIRLRDPVERQTAAV
Ga0318560_105662482	3300031682	Soil	MTVVLISGGLTFVIGLLIARPFSVTGGRLHIRAHTADDDRRRALLRQLRDLDDDLAAGKLTQADHVRLRDPVEREAAAVLRPAGGTAVVASGSPGSPHSSS
Ga0318493_107213501	3300031723	Soil	MTVVLISGGLTFLVGLLILRPFSVTERRLRVQVHTLDDDRRRELLRQLRDLDDDLAAGKLTHDDHARL
Ga0318500_104444982	3300031724	Soil	MTVVLISGGLTFVIGLLIARPFSVTGGRLHIRAHTADDDRRRALLRQLRDLDDDLAAGKLTQADHVRLRDPVEREAAAVL
Ga0318501_101625953	3300031736	Soil	MTVVLLSGGLTFLVGLLILRPFSVTGSRLRVRPHAPDDDRRRELLRQLRDLDD
Ga0318501_106334652	3300031736	Soil	MTVVIIAGALTFTLGLLILGPFPGKAGRPLAQGDDPEEDHRRALLRQLRDLDDDLAAGKLAADDHTRLREPVE
Ga0306918_104505301	3300031744	Soil	MTVVLISGGLTFLVGLLILRPFSVTERRLRVQVHTLDDDRRRELLRQLRDLDDDL
Ga0306918_109621582	3300031744	Soil	MTVVLLSGGLTFLVGLLILRPFSVAGSRLRVRAHAPDDDRRRELLRQLRDLDDDLAAGKLTSDDYARLRDPVEREAATVLGREAGGAAVV
Ga0306918_113560891	3300031744	Soil	MTAVIIAGALTFVAGLLILGPVSGKADRLQARGHDPGDDRRLALLRQLRDLDDDLAAGKLAAGDHTRLREPVEREAAAALSRNAQ
Ga0318502_102734363	3300031747	Soil	MTVAIIAGVLTFVVGLLILYPFWGKPGRPQVQGHDPDDDRRRALLRQLRDLDDDLAAGKLAAGDHTRLREPLERAAAATLRRKAQGPAGGI
Ga0318502_106350682	3300031747	Soil	MTAVLISGGLTFLVGLLILRPFSVTARRLRVQVHTPDDDRPRELLRQLRDLDDDLAAGKLTQDDHAQLRDPVEREA
Ga0318494_107038601	3300031751	Soil	MTVAIIAGVLTFVVGLLILYPFWGKPGRPQVQGHDPDDDRRRALLRQLRDLDDDLAAGKLAAGDHTRLREPLERAAAATLRRKAQGPAGGIGGGRYRRCAG
Ga0318494_108698871	3300031751	Soil	MTVVLISGGLTFLVGLLILRPFSVTERRLRVQVHTPDDDRRRELLRQLRDLDDDLT
Ga0318537_101353453	3300031763	Soil	MTVVLLSGGLTFLVGLLILRPFSVAGSRMRVRAYAPDDDRRRELLRQLRDLDDDLAAGKLTRDDHARLRDPVEREAATVLGRKAG
Ga0318554_107790391	3300031765	Soil	MTVVLLSGGLTFLVGLLILRPLSVTGTRLRVRAHAPDGDRRRELLRQLRDLDDV
Ga0318526_103084542	3300031769	Soil	MTVVLISGGLTFLVGLLILRPFSVTERRLRVQVHTLDDDRRRELLRQLRDLDDDLAAGKLTQDDHARLRDPVEREAAAVLGRKAQ
Ga0318521_101721603	3300031770	Soil	MTVVLITGGLTFVVGLLIFRPLSVTGGRLHIRAHTPDDDRRRALLRQLRDLDDDLAAGKLTEADRVRLRDPVERETAAVLQRKT
Ga0318546_104711431	3300031771	Soil	MTVVLISGGLTFLVGLLILRPFSVTERRLRVQVHTPDDDRRRELLRQLRDLDDDLAAGK
Ga0318498_100508091	3300031778	Soil	MTVVLISGGLTFVVGLLILRPFSVTGGRPHVRAHTPDDDRRRELLRQLRDLDDDLAADKLTQADHVRLRDPVEREAAAVLRRKTQGPA
Ga0318498_103376292	3300031778	Soil	MTVVLLSGGLTFLVGLLILRPFSVTGSRLRVRPHAPDDDRRRELLRQLRDLDDDLAAGKLTRDDHARLRDPVEREAATVLGRK
Ga0318498_104478742	3300031778	Soil	MTVVLLSGGLTFLVGLLILRPLSVTGTRLRVRAHAPDGDRRRELLRQLRDLDDDLA
Ga0318498_105305312	3300031778	Soil	MTVVVISGGLTFVIGLLILRPLSARGGRLQLPAHALDEDRHRGLLRQLRDLDDDLAAGKLTAGDHARLRDPVEREAAATLRRKGQ
Ga0318566_101452241	3300031779	Soil	MTVVVISGVLTFIVGLLIMRPLAVTGGRLHVPAHAPDDDRRRELLRQLRDLDDDLATGKLTADDHVRLRDPVEREAAAALRRK
Ga0318566_104671642	3300031779	Soil	MTVVVISGGLTFVIGLLILRPLSARGGRLQLPAHALDEDRHRGLLRQLRDLDDDLAAGKLTAGDHARLRDPVEREAAATLRR
Ga0318566_104973111	3300031779	Soil	MTVVVISGGLTFVIGLLILRPFSVSGGRPQVRSHTPDDDRRRALLRQLRDLDDDLAAGKLTEADHIRLRDPVERQTAAVLRRKTKGSASRTGVVTASTRAGSA
Ga0318566_105778531	3300031779	Soil	MTAVLISGGLTFLVGLLILRPFSVTARRLRVQVHTPDDDRPRELLRQLRDLDDDLAAGKLTQDDHARLRDPVEREAAAVLGR
Ga0318508_10044041	3300031780	Soil	MTVVLLSGGLTFLVGLLILRPFSVAGSRLRVRAHAPDDDRRRELLRQLRDLDDDLAAGKLTSDDYAR
Ga0318547_107114362	3300031781	Soil	MTVVLISGGLTFLVGLLILRPFSVTDGRLRARAHTPDDDRRRELLRQLRDLDDDLAAGKLTQDDHARLRDPVERKAAA
Ga0318552_100507574	3300031782	Soil	MTVVFISGGLTLVVGLLIMRPFSVTGGRMHVRSHTPDDDRRRELLRQLRDLDDDLAAGK
Ga0318552_101827861	3300031782	Soil	MTVVLISGGLTFVIGLLIARPFSVTGGRLHIRAHTADDDRRRALLRQLRDLDDDLAAGKLTQQC
Ga0318552_104599912	3300031782	Soil	MTAALLSGGLTFLAGLLLFRPFSVTDGHLRVRASAPEDDRRRELLRQLRDLDDDLAAGKLTRDDHARLRDPVEREAAVVLARKAPGPAGS
Ga0318552_106412211	3300031782	Soil	MTVVVISGGLTFVIGLLILRPFSASGGRPQVRSHTPDDDRRRALLRQLRDLDDDLAAGKLTEADHIRLRDPVEREAAAVLRRKTKGSASRTG
Ga0318529_102667611	3300031792	Soil	MTVVLLSGGLTFLVGLLILRPFSVTGSRLRVRPHAPDDDRRRELLRQLRDLDDDLAAGKLTRDDHARLRDPVEREAAT
Ga0318548_100276804	3300031793	Soil	MTVVLISGGLTFLVGLLILRPFSVTDGRLRARAHTPDDDRRRELLRQLRDLDDDLAAGKLTQDDHARLRDPVEREAAAVLGRKAQRPAPAPRSCDGPEARDPC
Ga0318557_100976353	3300031795	Soil	MTVVLISGGLTFLVGLLILRPFSVTERRLRVQVHTLDDDRRRELLRQLRD
Ga0318550_103208852	3300031797	Soil	MTVVLLSGGLTFLVGLLILRPLSVTGTRLRVRAHAPDGDRRRELLRQLRDLDDDLAAGKLTRDDHTRLRDPVEREAATV
Ga0318550_103951572	3300031797	Soil	MTVVLISGGLTFLVGLLILRPFSVTDGRLRARAHTPDDDRRRELLRQLRDLDDDLAAGKLTQDDHARLRDPVEREAAAVLGRKA
Ga0318565_103642532	3300031799	Soil	MTVVFISGGLTLVVGLLIMRPFSVTGGRMHVRSHTPDDDRRRELLRQLRDLDDDLAAGKLTQADHIRLRDPVEREAAAVLGHKTQGPAGGIAVVTSG
Ga0318565_105462602	3300031799	Soil	MTVVLISGGLTFLVGLLILRPYSPTGGRLHVRAHAPDDDRRRELLRQLRDLDDDLAADKLTSDD
Ga0318497_104821871	3300031805	Soil	MTVVIIAGALTFTLGLLILGPFPGKAGRPLAQGDDPEEDHRRALLRQLRDLDDDLAAGKLAADDHTRLREPVEREAAAALSRKAQGPAGGIGGGRSGTPPV
Ga0318497_106810481	3300031805	Soil	MTVVLLSGGLTFLAGLLLFRPLSVTDGHLRVRASAPEDDRRRELLRQLRDLDDDLAAGKLTRD
Ga0318567_100250821	3300031821	Soil	MTVVLLSGGLTFLVGLLILRPFSVTGSRLRVRPHAPDDDRRRELLRQLRDLDDDLAAGKLTRDDHARLRDPVEREAATVLG
Ga0318567_106106231	3300031821	Soil	MTVVVISGGLTFVIGLLILRPLSARGGRLQLPAHALDEDRHRGLLRQLRDLDDDLAAGKLTAGDHARLRDPVEREAAATLSRKDQGPAG
Ga0310917_102761611	3300031833	Soil	MTVVVISGGLTFVIGLLILRPFSVSGGRPQVRSHTPDDDRRRALLRQLRDLDDDLAAGKLTEADHIRLRDPVEREAAAVLRRKTKGSASRTGVVTASTRG
Ga0318512_101206383	3300031846	Soil	MTVVLISGGLTFLVGLLILRPFSVTERRLRVQVHTLDDDRRRELLRQLRDLDDDLAAGKLTQDDHARLRDPVEREAAAVLGRKAQRPAGSAAVLR
Ga0318495_100483071	3300031860	Soil	MTVVLISGGLTFVIGLLIARPFSVTGGRLHIRAHTADDDRRRALLRQLRDLDDDLAAGKLTQADHVRLRDPVEREAAAVLRPAGGTAV
Ga0318495_101327591	3300031860	Soil	MTAALLSGGLTFLAGLLLFRPFSVTGGHLRVRASAPEDDRRRELLRQLRDLDDDLMAGKLTRDDHARLRDPVERE
Ga0318495_103178031	3300031860	Soil	MTAVIITGGLTFVVGLLILRPFSAKRGLLHVRAYNPDDDRRRELLRQLRDLDDDLAAGKLTQADHA
Ga0306925_104053854	3300031890	Soil	MTVVLISGGLTFLVGLLILRPYSPTGGRLHVRAHAPDDDRRRELLRQLRDLDDDLAADKLTSDDHARLRDPVEREAAAV
Ga0306925_120478242	3300031890	Soil	MTVVLLSGGLTFLVGLLILRPLSVTGTRLRVRAHAPDGDRRRELLRQLRDLDDDLAAGKLTRDDHTRLRD
Ga0318536_100184041	3300031893	Soil	MTVVLISGGLTFVIGLLIARPFSVTGGRLHIRAHTADDDRRRALLRQLRDLDDDLAAGKLTQA
Ga0318522_102670392	3300031894	Soil	MTVVVISGVLTFIVGLLIMRPLAVTGGRLHVPAHAPDDDRRRELLRQLRDLDDDLATGKLTADDHVRLRDPVEREAAAALRRKSGGPPGGPG
Ga0318551_100276624	3300031896	Soil	MTVVLISGGLTFVIGLLIARPFSVTGGRLHIRAHTADDDRRRALLRQLRDLDDDLAAGKLTQADHVRLRDPVEREAAAVLRPAGGT
Ga0318551_103853492	3300031896	Soil	MTVVVISGVLTFIVGLLIMRPLAVTGGRLHVPAHAPDDDRRRELLRQLRDLDDDLATGKLTADDHVRLRDPVEREAAAALA
Ga0306921_109634384	3300031912	Soil	MTVVVISGGLTFVIGLLILRPFSASGGRPQVRSHTPDDDRRRALLRQLRDLDDDLAAGKLTEADHIRLRDPVERQTAAVLRRKT
Ga0306921_110520101	3300031912	Soil	MTVVVISGGLTFVIGLLILRPLSATDGSLRLRARAPDDDRGRELLRQLRDLDDDLAAGKLTADDHVRLRDPVEREAAAVLGRKTQDLAGETGAVTSS
Ga0310913_104868672	3300031945	Soil	MTVVLISGGLTFLVGLLILRPFSVTERRLRVQVHTLDDDRRRELLRQLRDLDDDLAAGKLTQDDHARLRDPVEREAAAVLG
Ga0310909_100194721	3300031947	Soil	MTVVLISGGLTFVIGLLIARPFSVTGGRLHIRAHTADDDRRRALLRQLRDLDDDLAAGKL
Ga0306926_104847244	3300031954	Soil	MTVVLISGGLTFVVGLLILRPFSVTGGRPHVRAHTPDDDRRRELLRQLRDLDDDLAADKLTQADHV
Ga0306926_111961943	3300031954	Soil	MTVVVISGVLTFIVGLLIMRPLAVTGGRLHVPAHAPDDDRRRELLRQLRDLDDDLATGKLTADDHVRLRDPVEREAAAALRR
Ga0306926_126065292	3300031954	Soil	MTVVVISGGLTFVIGLLILRPFSASGGRPQVRSHTPDDDRRRALLRQLRDLDDDLAAGKLTEADHIRLRDPVEREAAAVLRRKTKGSASRTGV
Ga0306926_128524551	3300031954	Soil	MTVVVISGGLTFIIGLLILRPFSARGGRLQLPAYAPDEDRHRELLRQLRDLDDDLAAGKLTAGDHARLRDPVEREAAATLRRKGQG
Ga0318530_100379331	3300031959	Soil	MTVVLISGGLTFLVGLLILRPFSVTDGRLRARAHTPDDDRRRELLRQLRDLDDDLAAGKLTQDDHARLRDPVEREAAAVLG
Ga0318562_102001383	3300032008	Soil	MTVVLISGGLTFLVGLLILRPFSVTERRLRVQVHTLDDDRRRELLRQLRDLDD
Ga0318569_103957892	3300032010	Soil	MTVVLITGGLTFVVGLLIFRPLSVTGGRLHIRAHTPDDDRRRALLRQLRDLDDDLAAGKLTEADRVRLRD
Ga0318569_105690841	3300032010	Soil	MTAALLSGGLTFLAGLLLFRPFSVTGGHLRVRASAPEDDRRRELLRQLRDLDDDLMAGKLTRDDHARLRDPVE
Ga0318507_100168144	3300032025	Soil	MTVVLLSGGLTFLVGLLILRPFSVAGSRMRVRAYAPDDDRRRELLRQLRDLDDDLAVGKLTRDDYARLRAPVE
Ga0318507_103668711	3300032025	Soil	MTVVLLSGGLTFLVGLLILRPLSVTGTRLRVRAHAPDDDRRRELLRQLRDLDDDLAAGKLTRDDHTRLRDPVEREAATVLGRKAGGTAVVT
Ga0310911_103297763	3300032035	Soil	MTVVLLSGGLTFLVGLLILRPFSVTARRLRVQVHTPDDDRPRELLRQLRDLDDDLAAGKLTQDDHAQLRDPVE
Ga0318549_100445754	3300032041	Soil	MTVVLISGGLTFLVGLLILRPFSVTERRLRVQVHTLDDDRRRELLRQLRDLDDDLAAGKLTQDDHARLRDPVEREAAAVLGRKAQRPAGSAAVV
Ga0318556_104311622	3300032043	Soil	MTIVVISGVLTFVIGLLIMRPLSAPAGRLQLRAHGPDDDRRRELLRQLRDLDDDLAAGKLTADDHVRLRDPVEREAAAVLRRKA
Ga0318558_104780511	3300032044	Soil	MTVVLLSGGLTFLVGLLILRPLSVTGTRLRVRAHAPDDDRRRELLRQLRDLDDDLAAGKLTRDDHTRLRDPVEREAATVLGRK
Ga0318506_102931762	3300032052	Soil	MTAVIITGGLTFVVGLLILRPFSAKRGLLHVRAYNPDDDRRRELLRQLRDLDDDLAAGKLTQADHARLRD
Ga0318570_101259911	3300032054	Soil	MTAALLSGGLTFLAGLLLFRPFSVTGGHLRVRASAPEDDRRRELLRQLRDLDDDLMAGKLTRDDHARLRDPVEREAAVVL
Ga0318570_101633543	3300032054	Soil	MTVVLLSGGLTFLVGLLILRPLSVTGTRLRVRAHAPDGDRRRELLRQLRDLDDDLAAGKLTRDDHTRLRDP
Ga0318504_100782111	3300032063	Soil	MTVVLISGGLTFLVGLLILRPFSVTDGRLRARAHTPDDDRRRELLRQLRDLDDDLAAGKLTQDDHARLRDP
Ga0318514_106457872	3300032066	Soil	MTVVVISGVLTFIVGLLIMRPLAVTGGRLHVPAHAPDDDRRRELLRQLRDLDDDLATGKLTADD
Ga0318524_104794451	3300032067	Soil	MTIVVISGVLTFVIGLLIMRPLSAPAGRLQLRAHGPDDDRRRELLRQLRDLDDDLAAGKLTADDHVRLR
Ga0318553_106832822	3300032068	Soil	MTAVVISGVLTFIVGLLIMRPFSVTGGRLQARAHAPDDDRRRELLRQLRDLDDDLATGKLTADDHVRLRDPVEREAAAVLRRKSGAPASGAG
Ga0306924_120879941	3300032076	Soil	MTVVVISGGLTFVIGLLILRPFSVSGGRPQVRSHTPDDDRRRALLRQLRDLDDDLAAGKLTEADHIRLRDPVERQTAAVLRRKTKGSASRTGVVTAST
Ga0318525_105736492	3300032089	Soil	MTVAIIAGVLTFVVGLLILYPFWGKPGRPQVQGHDPDDDRRRALLRQLRDLDDDLAAGKLAAGLAPE
Ga0318518_101921463	3300032090	Soil	MTVVLLSGGLTFLVGLLILRPFSVAGSRMRVRAYAPDDDRRRELLRQLRDLDDDLAVGKL
Ga0318540_101120711	3300032094	Soil	MTVVFISGGLTLVVGLLIMRPFSVTGGRMHVRSHTPDDDRRRELLRQLRDLDDDLAAGKLTQADHIRLRDPVEREAAAVLGHKTQGPAGGTAVVTSG
Ga0318540_103409612	3300032094	Soil	MTVVLISGGLTFLVGLLILRPFSVTERRLRVQVHTLDDDRRRELLRQLRDLDDDLAAGKLTQDDHARLRDPVEREAAAVLGRKAQRPAGTGPAVTTA
Ga0307415_1002291184	3300032126	Rhizosphere	MIVMLIAGGLTFVVGLLILRPFASAHGYRHIRIHTSDEIRHRELLRQLRDLDDDLAAGKLTDADHVRLR
Ga0306920_1000707198	3300032261	Soil	MTVVLISGGLTFLVGLLILRPYSPTGGRLHVRAHAPDDDRRRELLRQLRDLDDDLAAGKLTSDDHARLRDPVEREAAAVLGRKAQRPAVGTAVTAPAPR
Ga0306920_1028725772	3300032261	Soil	MTIVVISGVLTFVIGLLIMRPLSAPAGRLQLRAHGPDDDRRRELLRQLRDLDDDLAAGKLTADDHVRLRDPVEREAAAVLRRKAQGPAGGTAAGPAGPRSGSVTS
Ga0306920_1037263242	3300032261	Soil	MTVVIIAGALTFTLGLLILGPFPGKAGRPQARGDDPEDDHRRALLRQLRDLDDDLAAGKLPAGDHTRLREPVEREAAAALSRKAQG
Ga0318519_103048091	3300033290	Soil	MTVVLISGGLTFVIGLLIARPFSVTGGRLHIRAHTADDDRRRALLRQLRDLDDD
Ga0318519_104721522	3300033290	Soil	MTVVFISGGLTLVVGLLIMRPFSVTGGRMHVRSHTPDDDRRRELLRQLRDLDDDLAAGKLTQADHIR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041354

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences