Metagenome / Metatranscriptome Family F041062

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F041062
Family Type	Metagenome / Metatranscriptome
Number of Sequences	160
Average Sequence Length	57 residues
Representative Sequence	MPEFIVAIDHITYYAVQAEDEVTAIDLALEGQGLEIDSETRDAYISEYESSDPR
Number of Associated Samples	85
Number of Associated Scaffolds	160

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.99 %
% of genes near scaffold ends (potentially truncated)	16.25 %
% of genes from short scaffolds (< 2000 bps)	81.88 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.250 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (25.625 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.250 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.05% β-sheet: 15.85% Coil/Unstructured: 56.10%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 160 Family Scaffolds
PF12728	HTH_17	1.88
PF01904	DUF72	1.88
PF04392	ABC_sub_bind	1.25
PF13011	LZ_Tnp_IS481	1.25
PF07978	NIPSNAP	1.25
PF02627	CMD	0.62
PF00582	Usp	0.62
PF13561	adh_short_C2	0.62
PF04851	ResIII	0.62
PF13610	DDE_Tnp_IS240	0.62
PF05598	DUF772	0.62
PF07992	Pyr_redox_2	0.62
PF01471	PG_binding_1	0.62
PF12092	DUF3568	0.62
PF00313	CSD	0.62
PF00239	Resolvase	0.62
PF13546	DDE_5	0.62
PF02230	Abhydrolase_2	0.62
PF02738	MoCoBD_1	0.62
PF03972	MmgE_PrpD	0.62
PF04545	Sigma70_r4	0.62
PF01797	Y1_Tnp	0.62
PF06439	3keto-disac_hyd	0.62

COG ID	Name	Functional Category	% Frequency in 160 Family Scaffolds
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	1.88
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.25
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.62
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.62
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.62
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.62
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.62
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.25 %
All Organisms	root	All Organisms	33.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.25 %
cellular organisms	root	All Organisms → cellular organisms	33.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.25 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.25 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	8.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.38 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	3.75 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.25 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	8.12 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.75 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.50 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.50 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.25 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.25 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.25 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	8.12 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.75 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.88 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.25 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1.25 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.62 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.62 %
Chloroflexi incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis	0.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.25 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	8.12 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.88 %
unclassified candidate division NC10	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10	1.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.25 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	0.62 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.62 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.62 %
SAR202 cluster	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster	0.62 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.25 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	8.12 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.88 %
candidate division NC10 bacterium CSP1-5	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	1.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.25 %
SAR202 cluster bacterium MP-SInd-SRR3963457-G2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium MP-SInd-SRR3963457-G2	0.62 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.62 %
Bosea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea	0.62 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.62 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.25 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	8.12 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.88 %
candidate division NC10 bacterium CSP1-5	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	1.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.25 %
unclassified Bosea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea	0.62 %
SAR202 cluster bacterium MP-SInd-SRR3963457-G2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium MP-SInd-SRR3963457-G2	0.62 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.62 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.62 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.25 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	8.12 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.75 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.88 %
candidate division NC10 bacterium CSP1-5	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	1.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.25 %
Bosea sp. OK403	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. OK403	0.62 %
SAR202 cluster bacterium MP-SInd-SRR3963457-G2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium MP-SInd-SRR3963457-G2	0.62 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.62 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.62 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2328285	Not Available	1062	Open in IMG/M
3300000787\|JGI11643J11755_11324807	Not Available	671	Open in IMG/M
3300003373\|JGI25407J50210_10082242	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	800	Open in IMG/M
3300003373\|JGI25407J50210_10194016	Not Available	501	Open in IMG/M
3300003890\|Ga0063162_1008931	All Organisms → cellular organisms → Bacteria	60182	Open in IMG/M
3300004463\|Ga0063356_100138770	Not Available	2742	Open in IMG/M
3300004463\|Ga0063356_100686847	Not Available	1404	Open in IMG/M
3300004463\|Ga0063356_101554564	Not Available	982	Open in IMG/M
3300004463\|Ga0063356_101838816	Not Available	911	Open in IMG/M
3300004463\|Ga0063356_102790315	Not Available	752	Open in IMG/M
3300004463\|Ga0063356_103599288	Not Available	667	Open in IMG/M
3300004463\|Ga0063356_103801145	Not Available	650	Open in IMG/M
3300004463\|Ga0063356_104801577	Not Available	581	Open in IMG/M
3300004463\|Ga0063356_105330563	Not Available	552	Open in IMG/M
3300005713\|Ga0066905_102148944	Not Available	520	Open in IMG/M
3300005937\|Ga0081455_10052945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexi incertae sedis → SAR202 cluster → SAR202 cluster bacterium MP-SInd-SRR3963457-G2	3471	Open in IMG/M
3300005937\|Ga0081455_10164294	All Organisms → cellular organisms → Bacteria	1698	Open in IMG/M
3300005981\|Ga0081538_10031954	Not Available	3538	Open in IMG/M
3300005981\|Ga0081538_10045975	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2699	Open in IMG/M
3300005981\|Ga0081538_10046752	Not Available	2664	Open in IMG/M
3300005981\|Ga0081538_10055316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2338	Open in IMG/M
3300005981\|Ga0081538_10128540	Not Available	1197	Open in IMG/M
3300005981\|Ga0081538_10148980	Not Available	1063	Open in IMG/M
3300005981\|Ga0081538_10364466	Not Available	522	Open in IMG/M
3300006845\|Ga0075421_100030475	All Organisms → cellular organisms → Bacteria → Proteobacteria	6822	Open in IMG/M
3300006845\|Ga0075421_100033623	All Organisms → cellular organisms → Bacteria	6492	Open in IMG/M
3300006845\|Ga0075421_100227169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2297	Open in IMG/M
3300006845\|Ga0075421_100444950	Not Available	1549	Open in IMG/M
3300006845\|Ga0075421_100972213	Not Available	963	Open in IMG/M
3300006846\|Ga0075430_100217613	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300006846\|Ga0075430_101347152	Not Available	587	Open in IMG/M
3300006853\|Ga0075420_100238239	Not Available	1583	Open in IMG/M
3300006876\|Ga0079217_10664283	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300006880\|Ga0075429_100729290	Not Available	868	Open in IMG/M
3300007004\|Ga0079218_13540972	Not Available	530	Open in IMG/M
3300007790\|Ga0105679_10468113	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1697	Open in IMG/M
3300009094\|Ga0111539_10145100	Not Available	2779	Open in IMG/M
3300009094\|Ga0111539_10589778	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300009094\|Ga0111539_11653122	Not Available	743	Open in IMG/M
3300009100\|Ga0075418_10719658	Not Available	1077	Open in IMG/M
3300009100\|Ga0075418_12255493	Not Available	594	Open in IMG/M
3300009146\|Ga0105091_10150570	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1090	Open in IMG/M
3300009147\|Ga0114129_12102120	Not Available	681	Open in IMG/M
3300009147\|Ga0114129_12163052	Not Available	670	Open in IMG/M
3300009168\|Ga0105104_10076448	Not Available	1805	Open in IMG/M
3300009168\|Ga0105104_10077966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1786	Open in IMG/M
3300010038\|Ga0126315_10562321	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	733	Open in IMG/M
3300010038\|Ga0126315_10745514	Not Available	642	Open in IMG/M
3300010041\|Ga0126312_10411544	Not Available	962	Open in IMG/M
3300010043\|Ga0126380_11070364	Not Available	685	Open in IMG/M
3300010043\|Ga0126380_11859532	Not Available	546	Open in IMG/M
3300010046\|Ga0126384_11585227	Not Available	616	Open in IMG/M
3300010145\|Ga0126321_1132207	Not Available	838	Open in IMG/M
3300010362\|Ga0126377_10212341	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1862	Open in IMG/M
3300010362\|Ga0126377_10508940	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1237	Open in IMG/M
3300010362\|Ga0126377_11046522	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300010362\|Ga0126377_13063103	Not Available	540	Open in IMG/M
3300010398\|Ga0126383_10907862	Not Available	967	Open in IMG/M
3300012022\|Ga0120191_10064457	Not Available	676	Open in IMG/M
3300012204\|Ga0137374_10152235	Not Available	2063	Open in IMG/M
3300012204\|Ga0137374_10227016	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1585	Open in IMG/M
3300012204\|Ga0137374_10242076	Not Available	1519	Open in IMG/M
3300012204\|Ga0137374_10501239	Not Available	943	Open in IMG/M
3300012204\|Ga0137374_11269681	Not Available	510	Open in IMG/M
3300012206\|Ga0137380_11681440	Not Available	519	Open in IMG/M
3300012208\|Ga0137376_10119043	All Organisms → cellular organisms → Bacteria	2252	Open in IMG/M
3300012212\|Ga0150985_104828983	Not Available	528	Open in IMG/M
3300012350\|Ga0137372_10586556	Not Available	819	Open in IMG/M
3300012355\|Ga0137369_11047520	Not Available	537	Open in IMG/M
3300012356\|Ga0137371_10514693	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	923	Open in IMG/M
3300012358\|Ga0137368_10148546	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300012358\|Ga0137368_10309873	Not Available	1064	Open in IMG/M
3300012358\|Ga0137368_10491427	Not Available	792	Open in IMG/M
3300012360\|Ga0137375_10239525	Not Available	1684	Open in IMG/M
3300012360\|Ga0137375_10276516	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300012360\|Ga0137375_10668190	Not Available	853	Open in IMG/M
3300012469\|Ga0150984_114579871	Not Available	651	Open in IMG/M
3300012685\|Ga0137397_10703687	Not Available	751	Open in IMG/M
3300012922\|Ga0137394_10033028	All Organisms → cellular organisms → Bacteria	4213	Open in IMG/M
3300012922\|Ga0137394_10048006	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3517	Open in IMG/M
3300012923\|Ga0137359_11698501	Not Available	519	Open in IMG/M
3300012929\|Ga0137404_10008042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. OK403	7202	Open in IMG/M
3300012929\|Ga0137404_12329325	Not Available	501	Open in IMG/M
3300012930\|Ga0137407_10001765	All Organisms → cellular organisms → Bacteria	14161	Open in IMG/M
3300012930\|Ga0137407_10965889	Not Available	807	Open in IMG/M
3300012930\|Ga0137407_11329866	Not Available	683	Open in IMG/M
3300014487\|Ga0182000_10701437	Not Available	500	Open in IMG/M
3300015053\|Ga0137405_1249316	Not Available	932	Open in IMG/M
3300017997\|Ga0184610_1187046	Not Available	689	Open in IMG/M
3300018028\|Ga0184608_10445900	Not Available	558	Open in IMG/M
3300018052\|Ga0184638_1236771	Not Available	633	Open in IMG/M
3300018054\|Ga0184621_10292357	Not Available	575	Open in IMG/M
3300018056\|Ga0184623_10060665	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	1734	Open in IMG/M
3300018076\|Ga0184609_10059927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1643	Open in IMG/M
3300018076\|Ga0184609_10241335	Not Available	845	Open in IMG/M
3300018078\|Ga0184612_10014855	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → unclassified candidate division NC10 → candidate division NC10 bacterium CSP1-5	3973	Open in IMG/M
3300018078\|Ga0184612_10015150	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	3935	Open in IMG/M
3300018422\|Ga0190265_10357164	All Organisms → cellular organisms → Bacteria	1549	Open in IMG/M
3300018422\|Ga0190265_10828841	All Organisms → cellular organisms → Bacteria → Proteobacteria	1048	Open in IMG/M
3300018422\|Ga0190265_10875878	Not Available	1021	Open in IMG/M
3300018422\|Ga0190265_11256390	Not Available	858	Open in IMG/M
3300018422\|Ga0190265_11390685	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	817	Open in IMG/M
3300018422\|Ga0190265_12035854	Not Available	679	Open in IMG/M
3300018465\|Ga0190269_10154008	Not Available	1193	Open in IMG/M
3300018466\|Ga0190268_10759832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	725	Open in IMG/M
3300018466\|Ga0190268_11747063	Not Available	557	Open in IMG/M
3300018469\|Ga0190270_10177459	All Organisms → cellular organisms → Bacteria	1769	Open in IMG/M
3300019233\|Ga0184645_1086101	Not Available	1124	Open in IMG/M
3300019233\|Ga0184645_1206855	Not Available	783	Open in IMG/M
3300019259\|Ga0184646_1028375	All Organisms → cellular organisms → Bacteria	2094	Open in IMG/M
3300019259\|Ga0184646_1447901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1652	Open in IMG/M
3300019259\|Ga0184646_1521910	Not Available	534	Open in IMG/M
3300019377\|Ga0190264_10462470	Not Available	851	Open in IMG/M
3300019377\|Ga0190264_11042433	Not Available	659	Open in IMG/M
3300019789\|Ga0137408_1254908	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	948	Open in IMG/M
3300019789\|Ga0137408_1270432	Not Available	1819	Open in IMG/M
3300020170\|Ga0179594_10007446	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	2902	Open in IMG/M
3300020170\|Ga0179594_10266557	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	647	Open in IMG/M
3300021073\|Ga0210378_10099411	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1134	Open in IMG/M
3300021073\|Ga0210378_10355662	Not Available	546	Open in IMG/M
3300022195\|Ga0222625_1756554	Not Available	771	Open in IMG/M
3300025310\|Ga0209172_10004605	All Organisms → cellular organisms → Bacteria	18217	Open in IMG/M
3300027552\|Ga0209982_1077404	Not Available	547	Open in IMG/M
3300027743\|Ga0209593_10179269	Not Available	752	Open in IMG/M
3300027909\|Ga0209382_10136193	All Organisms → cellular organisms → Bacteria	2856	Open in IMG/M
3300027909\|Ga0209382_10242918	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2048	Open in IMG/M
3300027909\|Ga0209382_10465431	Not Available	1398	Open in IMG/M
3300027909\|Ga0209382_10790654	Not Available	1011	Open in IMG/M
3300027909\|Ga0209382_10850707	Not Available	966	Open in IMG/M
3300027909\|Ga0209382_11648910	Not Available	632	Open in IMG/M
3300027909\|Ga0209382_11872752	Not Available	581	Open in IMG/M
3300027961\|Ga0209853_1162505	Not Available	534	Open in IMG/M
3300028878\|Ga0307278_10036720	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	2232	Open in IMG/M
3300028878\|Ga0307278_10085752	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300028878\|Ga0307278_10123909	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1161	Open in IMG/M
3300028878\|Ga0307278_10296146	Not Available	716	Open in IMG/M
3300030006\|Ga0299907_10478679	Not Available	988	Open in IMG/M
3300030006\|Ga0299907_10584521	Not Available	871	Open in IMG/M
3300030006\|Ga0299907_10644185	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	818	Open in IMG/M
3300030006\|Ga0299907_11127990	Not Available	568	Open in IMG/M
3300030619\|Ga0268386_10427998	Not Available	924	Open in IMG/M
3300030829\|Ga0308203_1018926	Not Available	878	Open in IMG/M
3300030830\|Ga0308205_1067268	Not Available	501	Open in IMG/M
3300030902\|Ga0308202_1036813	Not Available	850	Open in IMG/M
3300030903\|Ga0308206_1065833	Not Available	752	Open in IMG/M
3300030903\|Ga0308206_1072830	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	726	Open in IMG/M
3300030987\|Ga0308155_1008381	Not Available	800	Open in IMG/M
3300031092\|Ga0308204_10204895	Not Available	617	Open in IMG/M
3300031092\|Ga0308204_10297467	Not Available	539	Open in IMG/M
3300031548\|Ga0307408_100336545	Not Available	1276	Open in IMG/M
3300031720\|Ga0307469_12200098	Not Available	537	Open in IMG/M
3300031731\|Ga0307405_11210939	Not Available	654	Open in IMG/M
3300031740\|Ga0307468_100311344	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1150	Open in IMG/M
3300032180\|Ga0307471_103408817	Not Available	563	Open in IMG/M
3300032205\|Ga0307472_100095910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2025	Open in IMG/M
3300033417\|Ga0214471_11283404	Not Available	555	Open in IMG/M
3300034643\|Ga0370545_004941	All Organisms → cellular organisms → Bacteria	1763	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.00%
Host-Associated	Host-Associated	30.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.00%
Plants	Host-Associated → Plants	30.00%
Aquatic	Environmental → Aquatic	15.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.25%
Freshwater	Environmental → Aquatic → Freshwater	8.12%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.12%
Sediment	Environmental → Aquatic → Sediment	5.62%
Roots	Host-Associated → Plants → Roots	5.62%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.25%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.62%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.62%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	5.62%
Sand	Environmental → Terrestrial → Soil → Sand	1.25%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.62%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.62%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.62%
Loam	Environmental → Terrestrial → Soil → Loam	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.62%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.62%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	5.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.25%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.25%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.62%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.62%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.62%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.62%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.62%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.37%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	6.25%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.62%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	5.62%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	5.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.00%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.50%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.50%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.25%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.25%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.62%
Hot Spring Sediments	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Sediments	0.62%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.62%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.62%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.62%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.62%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300003890	Hot spring sediment microbial communities from Chocolate Pots, Yellowstone National Park, Wyoming that are Fe(III) reducing - Chocolate Pots Core 3, 1cm	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025310	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG (SPAdes)	Environmental	Open in IMG/M
3300027552	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030830	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_368 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_23282852	3300000033	Soil	MAEFIVAIDHITYYAVQAKDEITAIDLVLEDQGVEISSETRDAYITEYESSSPRRHA*
JGI11643J11755_113248072	3300000787	Soil	FIVAIDHITYYAVQAKDEITAIDLVLEDQGVEISSETRDAYITEYESSSPRRHA*
JGI25407J50210_100822422	3300003373	Tabebuia Heterophylla Rhizosphere	MPEFIVAIDHITYYAVQAEDEVTAIDLALEGQGFEIDSETRDAYISEYERSDPRRHA*
JGI25407J50210_101940162	3300003373	Tabebuia Heterophylla Rhizosphere	MAEFIVAVDHITYFAVQAEDEVTAIDLVLEGEGLEIASETRDAYITEYERSYA*
Ga0063162_10089315	3300003890	Hot Spring Sediments	MPEFIVAIDRITYYAVRAADEVTAIDRVLEGQGQEIASETRDAYIAEYQTRDS*
Ga0063356_1001387706	3300004463	Arabidopsis Thaliana Rhizosphere	ITYYAVQAEDEISAIDLVLEGEGEEVSSETRDAYIAAYEGSGPRRHP*
Ga0063356_1006868472	3300004463	Arabidopsis Thaliana Rhizosphere	LVAIDYITYYAVQAEDEITAIDLVLEGQGLEIDSETRDAYMSDYQYSDTRPHA*
Ga0063356_1015545642	3300004463	Arabidopsis Thaliana Rhizosphere	LVKGASDMPEFIVAIDHITYYAVQAEDEVTAIDLVLEGQGEEVSSDTRDAYITEYQNSDHRRDS*
Ga0063356_1018388163	3300004463	Arabidopsis Thaliana Rhizosphere	MAEFIVAIDRMTYYAVQAEDEVTAIDLALEGQGEEVTSDTSDAYISEDQD*
Ga0063356_1027903151	3300004463	Arabidopsis Thaliana Rhizosphere	MAECIMAIDHITYDTVQAEDEITAIDLALEGQGVEVTSETRDAYISEDQN*
Ga0063356_1035992881	3300004463	Arabidopsis Thaliana Rhizosphere	MPEFMVAIDHITYYAVQAEDEVTAIDLVLEGEGEEVSSETRDAYIAACEGTDPRRHA*
Ga0063356_1038011451	3300004463	Arabidopsis Thaliana Rhizosphere	MPEFIVAIDHITYYAVQAKDEVTAIDLALEGQGLEIDSNTRDAYISEYEITDPRLPA*
Ga0063356_1048015772	3300004463	Arabidopsis Thaliana Rhizosphere	IMPEFIVAIDHITYYAVQAEDEVTAIDLALEGQGLEIDSETRDAYISEYERTDPRRHV*
Ga0063356_1053305631	3300004463	Arabidopsis Thaliana Rhizosphere	MPEFLVAVDHITYYAVQAQDEVTAIDLALEGQGLEMDSETRDAYISDYQSIELHRNV*
Ga0066905_1021489442	3300005713	Tropical Forest Soil	MSEFIVAIDHITYYAVQAEDEISAIDLVLEGQGEEISSETRDAYISAYERSDPGRHS*
Ga0081455_100529456	3300005937	Tabebuia Heterophylla Rhizosphere	MAEFIVAIDHTTYYAVQAEDEVTAIDLVLEDQGLEISSETRDAYITEYESSNPRRHA*
Ga0081455_101642942	3300005937	Tabebuia Heterophylla Rhizosphere	MPEFVVAIDHITYYAIQAEDEVTAIDLVLEGEGEEMASETRDAYIAEYERSTPWPDA*
Ga0081538_100319544	3300005981	Tabebuia Heterophylla Rhizosphere	MAEFIVAIDHITYYAVQAEDEVTAIDLVLEGEGLEISSETRDAYITAYEHERSDPRPHA*
Ga0081538_100459751	3300005981	Tabebuia Heterophylla Rhizosphere	MPEFVVAIDQITYYAVQAEDEVTAIDLVLEGEGQVIASETRDAYISQYEHERSDPHPHA*
Ga0081538_100467525	3300005981	Tabebuia Heterophylla Rhizosphere	MSQFIVAIDHITYYAVQAEDEVTAIDLVLEGEGEEISSETRDVYITEYQSNDSKAE*
Ga0081538_100553162	3300005981	Tabebuia Heterophylla Rhizosphere	MPEFVVAIDQITYYAVQAEDEVTAIDLVLEGEGEEIASETRDAYIAEYERSEPR*
Ga0081538_101285402	3300005981	Tabebuia Heterophylla Rhizosphere	MPEFMVAIDHITYYAVQADDEVTAIDLVLEGQGLEISSETRDAYISEYQSSDPRRPTRDDRLDPRAD*
Ga0081538_101489802	3300005981	Tabebuia Heterophylla Rhizosphere	MPEFVVAIDHITYYVIQAEDEVTAIDLVLEGEGQEIASETRDAYISAYENESSDPRPHA*
Ga0081538_103644662	3300005981	Tabebuia Heterophylla Rhizosphere	MADFIVAVDHVIYYAVKAEDEATAIDLVLEDQGLEIASETRDASIIKYERSRARRHA*
Ga0075421_1000304752	3300006845	Populus Rhizosphere	MPEFIVAIDHITYYAVQATDEITAIDLALEGQGLEIDSETRDAYITTFQSSDPRLPA*
Ga0075421_1000336237	3300006845	Populus Rhizosphere	MPEFIVAIDHITYYAVQAANEIAAIDLVLEGQGAEISSETRDAYINEYQSIDSNAI*
Ga0075421_1002271691	3300006845	Populus Rhizosphere	MPEFIVAIDHITYYAIQAEDEVTAIDLVLEGQGEEVSSDTRDAYITESQSSDLRRDS*
Ga0075421_1004449504	3300006845	Populus Rhizosphere	MPEFLVAIDHLTYYAVQAKDEVSAIDLALEGQGLEIDSETRDAYISDYQSLELHREV*
Ga0075421_1009722131	3300006845	Populus Rhizosphere	MPEFIVAIDHITYYAVQADDEVTAIDLVLEGQGEEVSSDTRDVYVTEYQNSEPQRDS*
Ga0075430_1002176131	3300006846	Populus Rhizosphere	IVYPFKTGGSTMPEFIVAIDHITYYAVQAANEIAAIDLVLEGQGAEISSETRDAYINEYQSIDSNAI*
Ga0075430_1013471521	3300006846	Populus Rhizosphere	MPEFMVAIDHITYYAVQAEDEVTAIDLVLEGQGEEVSSDTRDAYITESQSSDLRRDS*
Ga0075420_1002382391	3300006853	Populus Rhizosphere	MTGGVIMPEFIVAIDHITYYAVQATDEITAIDLALEGQGLEIDSETRDAYITTFQSSDPRLPA*
Ga0079217_106642832	3300006876	Agricultural Soil	MTQFIVAIDHITYYAVQAENEVTAIDLVLEGEGEEISSETRDAYISEYESSDPRRRA*
Ga0075429_1007292903	3300006880	Populus Rhizosphere	MPEFIVAIDHITYYAVQAEDEVTAIDLVLEGQGEEVSSDTRDAYITEYQ
Ga0079218_135409722	3300007004	Agricultural Soil	MPEFMVAIDHITYYAVQAKDEVSAIDLVLEGEGEEIASETRDAYISEYQSSDADQRSDPRRHA*
Ga0105679_104681132	3300007790	Soil	MPEFMVAIDHITYYAVQAEDEVTAIDLVLEGQGLEISSETRDAYISEYEHSDPRRPS*
Ga0111539_101451001	3300009094	Populus Rhizosphere	IDHITYYAVQARDEVTAIDLALEGQGLEIDSDTRDAYISEYEITDPRLPA*
Ga0111539_105897782	3300009094	Populus Rhizosphere	MPEFIVAIDHITYYAVQAEDEVTAIDLVLEGQGEEVSSDTRDAYITEYQSSDPRRDS*
Ga0111539_116531221	3300009094	Populus Rhizosphere	MPGFLVAIDQINYDAVRAEDGVTAIDLALEGQGLEMHSGTRDAYISDYQSIELHRNA*
Ga0075418_107196582	3300009100	Populus Rhizosphere	MKGGSIMPEFIVAIDHITYYAVQAKDEVTAIDLALEGQGLEIDSNTRDAYISEYEITNPRLSA*
Ga0075418_122554931	3300009100	Populus Rhizosphere	MPGFLVAIDQITYDAVRAEDGVTAIDLALEGQGLEMHSGTRDAYISDYQSIELHRNA*
Ga0105091_101505702	3300009146	Freshwater Sediment	MWKPIISLIQGGSTMPEFMVAIDHITYYAVRAEDEVTAIDLVLEGQGLEISSESRDA*
Ga0114129_121021201	3300009147	Populus Rhizosphere	GSTMPEFMVAIDHITYYAVQAEDEVTAIDLVLEGEGEEVSSETRDAYIAACEGSDPRRHA
Ga0114129_121630521	3300009147	Populus Rhizosphere	MPEFMVAIDHITYYAVQAEDEVTAIDLVLEGEGEEVSSETRDAYIAAC
Ga0105104_100764483	3300009168	Freshwater Sediment	MTEFIVAIDHITYYAVQAEDEVTAIDLVLEDQGLEISSETRDAYITEYERSEPR*
Ga0105104_100779662	3300009168	Freshwater Sediment	MPEFIVAIDHITYYAVQAEDEVTAIDLVLEGEGQEISSETRDAYISENKSSDPRPHA*
Ga0126315_105623212	3300010038	Serpentine Soil	MAEFIVAIDHITYYAVQAEDEVTAIDLVLEDQGVEISSETRDAYITEYESRNSRSHA*
Ga0126315_107455141	3300010038	Serpentine Soil	MAEFIVAVDHITYYGVQAEDEVTAIDLVLEDQGLEISSETRDAYITEYERSTPRR*
Ga0126312_103540842	3300010041	Serpentine Soil	AVQAEDEVTAIDLVLEDQGLEISSETRDAYITEYERSTPRR*
Ga0126312_104115443	3300010041	Serpentine Soil	MPEFMVAIDHITYYAVQAENEVTAIDLVLEGQGLEISSETRDAYVSESQIETLDHT
Ga0126380_110703643	3300010043	Tropical Forest Soil	MAEFIVAIDRITYYAVQAEDEITAIDLALEGQGEEVTADTRDAYISDDQIER
Ga0126380_118595321	3300010043	Tropical Forest Soil	MPEFIVAIDHITYYAVQAEDEVTAIDLTLEGQGLEIDSETRDAYISEYQSSDEDQRIDPRRHA*
Ga0126384_115852271	3300010046	Tropical Forest Soil	MPEFIVAIDHITYYAVQAVDEVTAIDLVLEGEGEEISSETRDAYISEYQSSDLGRHA*
Ga0126321_11322071	3300010145	Soil	MPEFIVAIDHITYYAIEAEDEVTAIDLVLEGQGEEVSSDTRDAYITEYESSDPRRDS*
Ga0126377_102123412	3300010362	Tropical Forest Soil	MKGVSLMPEFIVAIDHITYYAVQAEDEVTALDLALEGRGLEIDSETRDVYISAFQSSDPRLPARDLGGGESTGA*
Ga0126377_105089401	3300010362	Tropical Forest Soil	MPEFIVAIDHITYYAVQAEDEITAIDLALEGQGLEIDSETRDAYISEYQSSDADQRSDPR
Ga0126377_110465221	3300010362	Tropical Forest Soil	MPEFVVAIDHITYYAIQAEDEVTAIDLVLEGEGEEIASETRDAYIAEYERSTPWPDT*
Ga0126377_130631031	3300010362	Tropical Forest Soil	MPEFIVAIDHITYYAVQAEDEVTAIDLTLEGQGLEIDSETRDAYISEYQSSDEDQR
Ga0126383_109078622	3300010398	Tropical Forest Soil	MPEFIVAIDHITYYAVQAADEVTAIDLVLEGQGLEIASETRDAYISEYEYSDTRPHA*
Ga0120191_100644571	3300012022	Terrestrial	MKGGFPMPEFMVAIDHITYYAVQAEDEITAIDLVLDGQGLEISSETRDASISDYTSCDPRRHA*
Ga0137374_101522351	3300012204	Vadose Zone Soil	MAEFIVAIDRITYYAVQAEDEVTAIDLALDGRGEEVTSDTRDSYISEYQS*
Ga0137374_102270161	3300012204	Vadose Zone Soil	MAEFIVAIDHITYYVVQAEDEVTAIDLVLEGEGQEISSETRDAYISEYESSDPRLHA*
Ga0137374_102420763	3300012204	Vadose Zone Soil	MPEFIVAIDHITYYAVQAADEVTAIDLVLEGQGLEISSETHDAYISEYQSSDLGRHA*
Ga0137374_105012392	3300012204	Vadose Zone Soil	MAEFIVAIDHITYYAVQAEDEVTAIDLVLEDQGVEISSETRDAYITEYDSRNPR*
Ga0137374_112696811	3300012204	Vadose Zone Soil	MAEFIVAVDHITYYAVQAEDEVTAIDLVLEDQGLEISSETRDAYITEYERSTPRR*
Ga0137380_116814401	3300012206	Vadose Zone Soil	MPEFMVAIDHITYYAVEAEDEVTAIDLVLEGQGLEISSETRDAYITEYESGNPRRHA*
Ga0137376_101190432	3300012208	Vadose Zone Soil	MAEFIVAIDHITYYAVQAEDEVTAIDLVLEDQGLEISSETRDAYITEYESGNPRPHA*
Ga0150985_1048289831	3300012212	Avena Fatua Rhizosphere	MPEFIVAIDHITYYAVQAEDEVTAIDLALEGQGLEIDSETRDAYISEYQSSDVDQRSDPRRHA*
Ga0137372_105865562	3300012350	Vadose Zone Soil	PVKGGSTMPEFIVAIDHITYYAVQAADEVTAIDLVLEGQGLEISSETHDAYISEYQSSDLGRHA*
Ga0137369_110475202	3300012355	Vadose Zone Soil	HITYYAVQAEDEVTAIDLVLEDQGLEIASETRDAYITEYECSEPRRHT*
Ga0137371_105146931	3300012356	Vadose Zone Soil	MPEFMVAIDHMTYYAVQAEDEVTAIDLALEGQGQEITSDTRDAYISEDQRE*
Ga0137368_101485461	3300012358	Vadose Zone Soil	MPEFMVAIDHITYYAVQAADEVTAIDLVLEGQGLEISSETRDAYISEYQSSEPRRHA*
Ga0137368_103098733	3300012358	Vadose Zone Soil	MAEFIVAVDHITYYAVQAEDEVTAIDLVLEDQGLEIASETRDAYITEYECSEPRRHT*
Ga0137368_104914271	3300012358	Vadose Zone Soil	MKGVSLMPEFIVAIDHITYYAVQAEDEVTALDLALEGRGLEIDSETRDVYISAFQSSDPRLPARDLGGGELTGA*
Ga0137375_102395253	3300012360	Vadose Zone Soil	MPEFIVAIDHIPYDAVQAADEVTAIDLVLEGQGLEISSETHDAYISEYQSSDLGRHA*
Ga0137375_102765163	3300012360	Vadose Zone Soil	MAEFIVAIDHITYYAVQAEDEVTAIDLVLEDQGVEISSETRDAYMTEYDSRNPR*
Ga0137375_106681901	3300012360	Vadose Zone Soil	MAEFIVAIDHITYYAVQAEDEVTAIDLVLEDQGLEISSETRDAYITEYESDNPRRHA*
Ga0150984_1145798712	3300012469	Avena Fatua Rhizosphere	MAEFIVAIDHITYYAVQAEDEVTAIDLVLEDQGLEISSETRDAYITEYESRNPRRHA*
Ga0137397_107036872	3300012685	Vadose Zone Soil	MAEFIVAVDHITYDAVQAEDEVTAIDLVLEDQGLEIASETRDAYISEYERSEPR*
Ga0137394_100330285	3300012922	Vadose Zone Soil	MPEFIVAIDHITYYAVQAEDEVTAIDLALEGEGLEIDSETRDAYISEDQRSDAGQRSDPRRHA*
Ga0137394_100480061	3300012922	Vadose Zone Soil	MPEFIVAIDHITYYAVQAEDEVTAIDLALEGQGLEIDSETRDAYISEYESSDPR
Ga0137394_102910933	3300012922	Vadose Zone Soil	YAVQAEDEVTAIDLALEGQGLEIDSETRDAYISEYESSDPRRHT*
Ga0137394_105870321	3300012922	Vadose Zone Soil	YAVQAEDEVTAIDLALEGQGLEIDSETRDAYISEYESSDPR*
Ga0137359_116985012	3300012923	Vadose Zone Soil	MPEFIVAIDHITYYAVQAEDEVTAIDLVLEGEGQEISSETRDAYISENESSDPRPHA*
Ga0137404_100080422	3300012929	Vadose Zone Soil	MPEFIVAIDHITYYAVQAEDEVTAIDLVLEGEGQKISSETRDAYISENKSSDPRPHA*
Ga0137404_123293251	3300012929	Vadose Zone Soil	MPEFIVAIDHITYYAVQAEDEVTAIDLALEGQGLEIDSETRDAYISEDQRSDADQRSDPRRHA*
Ga0137407_100017652	3300012930	Vadose Zone Soil	MPEFIVAIDHITYYAVQAEDEVTAIDLAVEGQGLEIDSETCDAYISEYESSDPRGHT*
Ga0137407_109658891	3300012930	Vadose Zone Soil	MAEFIVAIDHITYYAVQAEDEVTAIDLVLEDQGLEISSETRDAYITEYESGNPRRHA*
Ga0137407_113298661	3300012930	Vadose Zone Soil	MPEFIVAIDHITYYAVQAEDEVTAIDLVLEGEGEEISSETRDAYISENERSDPRPHA*
Ga0182000_107014372	3300014487	Soil	MTEFIVAIDHITYYAVQAEDEVIAIDLVLEDQGLEISSETRDAYITAYERSDSIAG*
Ga0137405_12493163	3300015053	Vadose Zone Soil	MAEFIVAIDRITYYAVQAEDEVTAIDLALEGQGEEVTSDTRDAYISEDQR*
Ga0184610_11870462	3300017997	Groundwater Sediment	MPEFMVAIDHITYYAVQAEDEITAIDLALEGQGLEIDSETRDAYISAYQSSEPRR
Ga0184608_104459001	3300018028	Groundwater Sediment	MPEFIVAIDHITYYAIQAEDEVTAIDLVLEGQGEEVSSDTRNAYITEYQSSDPRRDS
Ga0184638_12367711	3300018052	Groundwater Sediment	MTEFMVAIDHMTYYAVQAEDEVTAIDLVLEGEGQEISSETRDAYIAEYERSEPRRQTYR
Ga0184621_102923571	3300018054	Groundwater Sediment	MTEFMVAIDHLTYYAVQAEDEVTAIDLALEGQGEEVTSDTRDAYISEDQN
Ga0184623_100606651	3300018056	Groundwater Sediment	MAEFIVAVDHITYYAVQAEDEITAIDLALEGQGLEIDSETRDAYISAYQSSEPRRYA
Ga0184609_100599272	3300018076	Groundwater Sediment	MPEFIVAIDHITYYAIQAEDEVTAIDLVLEGQGEEVSSDTRDAYITEYQSSDPRRDS
Ga0184609_102413351	3300018076	Groundwater Sediment	MPEFIVAIDHITYYAVQAEDEVTAIDLALEGQGLEIDSETRDAYISEYESTDPRLPA
Ga0184612_100148551	3300018078	Groundwater Sediment	MPEFMVAIDHITYYAVQAEDEITAIDLALEGQGLEIDSETRDAYISAYQE
Ga0184612_100151503	3300018078	Groundwater Sediment	MTEFMVAIDHMTYYAVQAEDEVTAIDLVLEGQGLEISSETRDAYMSEYEYTDTRPHA
Ga0190265_103571642	3300018422	Soil	MPEFIVAIDHITYYAVQAKNEITAIDLALEGQGLEIDSETRDAYISTYESSESHPRM
Ga0190265_108288413	3300018422	Soil	MAEFMVAIDHITYYAVQAEDEITAIDLALEGQGLEIDSETRDAYISEYESPDPRQHG
Ga0190265_108758781	3300018422	Soil	MAEFIVAIDHITYYAVQAEDEVTAIDLVLEDQGLEIGSETRDAYITEDERSEP
Ga0190265_112563902	3300018422	Soil	MPEFLVAIDHITYYAVQAEDEVSAIDLALEGQGLEMDSETRDAYISDYQSIESRR
Ga0190265_113906852	3300018422	Soil	MPEFIVAIDHITYYAVQAEDEVTAIDLALEGQGLEIDSETRDAYISEYESSDADQRSDPRRHA
Ga0190265_120358542	3300018422	Soil	MTEFIVAIDHITYYAVQAEDEVTAIDLVLEDQGLEISSETRDAYIAEYERSEPRRHTYR
Ga0190269_101540081	3300018465	Soil	MAEFIVAVDHITYYAVQAEDEVTAIDLVLEDQGLEIASETRDAYITEYEHSEPR
Ga0190268_107598322	3300018466	Soil	MPEFMVAIDHITYYAVQAEDEVTAIDLALEGQGLEIDSETRDAYISEYESSDADQRSDPRRHA
Ga0190268_117470631	3300018466	Soil	VCRSLHLGFDVVQAEDEVTAIDLVLEGQGLEIASETRDAYITEYEHSEPR
Ga0190270_101774593	3300018469	Soil	MTEFIVAIDHITYYAVQAEDEVTAIDLVLEDQGFEISSETRDAYIAEYERSEPRRHTYR
Ga0184645_10861013	3300019233	Groundwater Sediment	MPEFMVAIDHITYYAVQAADEITAIDLALEGQGLEIDSETRDAYISAYQSSEPRRYA
Ga0184645_12068551	3300019233	Groundwater Sediment	MPEFIVAIDHITYYAIQAEDEVTAIDLVLEGQGEEVSSDTRDAYITEYQSSDPQRDS
Ga0184646_10283754	3300019259	Groundwater Sediment	MPEFIVAIDHVTYYAVQAEDEVTAIDLALEGEGQEVSSETRDAYICEYESSHPRRHS
Ga0184646_14479012	3300019259	Groundwater Sediment	MPEFMVAIDHITYYAVQAEDEITAIDLALEGQGLEIDSETRDAYISAYQSSEPRRYA
Ga0184646_15219101	3300019259	Groundwater Sediment	MPEFIVAIDHITYYAVQAEDEVTAIDLALEGQGLEIDSETRDAYISE
Ga0190264_104624701	3300019377	Soil	MTEFIVAIDHITYYAVQAEDEVTAIDLVLEDQGLEISSETRDAYIAEYEHSEPRRHTYR
Ga0190264_110424331	3300019377	Soil	MAEFIVAVDQITYYAVQVAAEITAIDLVLEDQGLEIASETRDAYITEYEHSEPR
Ga0137408_12549081	3300019789	Vadose Zone Soil	SSSVAIDHITYYAVQAEDEVTAIDLVLEGEGQEISSETRDAYISENESSDPRPHA
Ga0137408_12704322	3300019789	Vadose Zone Soil	MPEFIVAIDHITYYAVQAEDEVTAIDLAVEGQGLEIDSETCDAYISEYESSDPRGHT
Ga0179594_100074462	3300020170	Vadose Zone Soil	MPEFIVAIDHITYYAVQAEDEVTAIDLVLEGEGQEISSETRDAYISENKSSDPRPHA
Ga0179594_102665571	3300020170	Vadose Zone Soil	MPEFIVAIDHITYYAVQAEDEVTAIDLVLEGEGQEISSETRDAYISENESSDPRPHA
Ga0210378_100994113	3300021073	Groundwater Sediment	EMKPIISLVKGGCTMAEFIVAIDHITYYAVQAEDEVTAIDLVLEGQGLEISSETRDAYMSEYEYSDTRPHA
Ga0210378_103556622	3300021073	Groundwater Sediment	MPELIVAIDHITYYAVQAEDEVTAIDLALEGQGLEIDSETRDAYISEYESTDPRLPA
Ga0222625_17565542	3300022195	Groundwater Sediment	MPEFIVAIDHITYYAIQAEDAVTAIDLVLEGQGEEVSSDTRDAYITEYQSSDPQRDS
Ga0209172_100046057	3300025310	Hot Spring Sediment	MPEFIVAIDRITYYAVRAADEVTAIDRVLEGQGQEIASETRDAYIAEYQTRDS
Ga0209982_10774041	3300027552	Arabidopsis Thaliana Rhizosphere	MMPEFMVAIDHITYYAVQAEDEISAIDLVLEGEGEEVSSETRDAYIAAYEGSGPRRHP
Ga0209593_101792691	3300027743	Freshwater Sediment	MTEFIVAIDHITYYAVQAEDEVTAIDLVLEDQGLEISSETRDAYITEYESSHAPR
Ga0209382_101361932	3300027909	Populus Rhizosphere	MPEFIVAIDHITYYAVQATDEITAIDLALEGQGLEIDSETRDAYITTFQSSDPRLPA
Ga0209382_102429183	3300027909	Populus Rhizosphere	MPEFIVAIDHITYYAVQAANEIAAIDLVLEGQGAEISSETRDAYINEYQSIDSNAI
Ga0209382_104654313	3300027909	Populus Rhizosphere	MPEFLVAIDHLTYYAVQAKDEVSAIDLALEGQGLEIDSETRDAYISDYQSLELHREV
Ga0209382_107906541	3300027909	Populus Rhizosphere	MPEFIVAIDHITYYAIQAEDEVTAIDLVLEGQGEEVSSDTRDAYITESQSSDLRRDS
Ga0209382_108507071	3300027909	Populus Rhizosphere	MPEFIVAIDHITYYAVQADDEVTAIDLVLEGQGEEVSSDTRDVYVTEYQNSEPQRDS
Ga0209382_116489101	3300027909	Populus Rhizosphere	MPEFMVAIDHITYYAVQAEDEVTAIDLVLEGEGEEVSSETRDAYIAACEGSDPRRHA
Ga0209382_118727522	3300027909	Populus Rhizosphere	MPEFLVAVDHITYYAVQAQDEVTAIDLALEGQGLEMDSETRDAYISDYQSIELHRNV
Ga0209853_11625051	3300027961	Groundwater Sand	MTPRVKGASTMTEFIVAIDHITYYAVQAEDEVTAIDLVLEGQGEEISSETRDAYISEYESSDPRRHA
Ga0307278_100367203	3300028878	Soil	MAEFIVAVDHITYYAVQAEDEVTAIDLVLEDQGLEISSETRDAYITEYERSNPRR
Ga0307278_100857523	3300028878	Soil	MTEFIVAIDHITYYAVQAEDEVTAIDLVLEDQGLEIASETRDAYITEYEHSEPR
Ga0307278_101239091	3300028878	Soil	MAEFIVAIDHITYYAVQAEDEITAIDLVLENQGVEISSETRDAYITEYESGNPRRHA
Ga0307278_102961461	3300028878	Soil	MPEFIVAIDHITYYAVQAEDEVTAIDLALEGQGLEIDSETRDAYISENQSSDADQHSDPRRHA
Ga0299907_104786792	3300030006	Soil	MAEFIVAIDHITYYAVQAEDEVTAIDLVLEGEGLEIASETRDASITEYERSHARRYA
Ga0299907_105845213	3300030006	Soil	MAEFIVAIDHITYYAVQAEDEVTAIDLVLEDQGLEISSETRDAYITEYESSTPRRYA
Ga0299907_106441851	3300030006	Soil	GGSIMPEFMVAIEHITYYAIQAEDEVTAIDLVLEGQGLEIASETRDAYISEYERGDP
Ga0299907_111279901	3300030006	Soil	MAEFIVAIDHITYYAVQAEDEVTAIELVLEDQGLEIASETRDAYITEYERSTPRRYA
Ga0268386_104279981	3300030619	Soil	MAEFIVAIDHITYYAVQAEDEVTAIDLVLEDQGLEISSETRDAYITEYESSHARRHA
Ga0308203_10189262	3300030829	Soil	MTEFIVAIDHITYYAVQAEDEVTAIDLVLEDQWREISSETRDAYITEYERSEPRRHTSPERG
Ga0308205_10672681	3300030830	Soil	MPEFIVAIDHITYYAIQAEDEVAAIDLVLEGQGEEVSSDTRDAYITEYQSSDPRRDS
Ga0308202_10368132	3300030902	Soil	MTEFIVAIDHITYYAVQAEDEVTAIDLVLEDQGVEISSERRDAYITEYE
Ga0308206_10658331	3300030903	Soil	MPEFIVAIDHITYYAIQAEDEVTAIDLVLEGRGEEVSSDTRDAYITEYQSSDPQRDS
Ga0308206_10728302	3300030903	Soil	MPEFIVAIDHITYYAVQAEDEVTAIDLVLEGEGEEISSETRDAYISENERSDPRPHA
Ga0308155_10083812	3300030987	Soil	MPEFIVAIDHITYYAIQAEDAVTAIDLVLEGQGEEVSSDTRDAYITEYQSSDPRRDS
Ga0308204_102048951	3300031092	Soil	LFDKLRQGGSTMPEFIVAIDHITYYAVRAEDEVTAIDLVLEGQGLEIASETRDAYITENERREPR
Ga0308204_102974671	3300031092	Soil	KGMSDMPEFIVAIDHITYYAIQAEDEVTAIDLVLEGQGEEVSSDTRDAYITEYQSSDPRRDS
Ga0307408_1003365453	3300031548	Rhizosphere	MAEFIVAIDHITYYAVQAGDEVTAIDLVLEDQGLEISSETRDAYITEYESSHARRSA
Ga0307469_122000981	3300031720	Hardwood Forest Soil	MPEFIVAIDHITYYAVQAEDEVTAIDLVLEGEGQEIASETRDAYISENKSSDPRPHA
Ga0307405_112109392	3300031731	Rhizosphere	MAEFIVAIDHMTYYVVQAEDEVTAIDLVLEGEGEEISSETRDAYISENERSDPRPHT
Ga0307468_1003113441	3300031740	Hardwood Forest Soil	MPEFIVAIDHITYYAVQAEDEVTAIDLVLEGEGQEIASETRDAYISENKSRDPRPHA
Ga0307471_1034088171	3300032180	Hardwood Forest Soil	MPEFIVAIDHITYYAVQAEDEVTAIDLALEGQGLEIDSETRDAYISEDQRSDADQRSDPRRHA
Ga0307472_1000959101	3300032205	Hardwood Forest Soil	MPEFMVAIDHITYYAVRAEDEVTAIDLVLEGEGQEISSETRDAYISENKSSDPRPHA
Ga0214471_112834041	3300033417	Soil	MPEFIVAIDHITYYAVQAEDEVTAIDLALEGQGLEIDSETRDAYISEYESPDPRLPA
Ga0370545_004941_713_886	3300034643	Soil	MPEFMVAIDHITYYAVQAEDEVTAINLVIEGHGEEISSETRDAYIAEDESTDARRHA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F041062

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences