NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F040759

Metagenome / Metatranscriptome Family F040759

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F040759
Family Type Metagenome / Metatranscriptome
Number of Sequences 161
Average Sequence Length 73 residues
Representative Sequence ARLAPRALVREGVRLRLAWKRAVPFNRRVDELLIADRSALAGTCVPYGDLGDPGISPHWPPVKTTHQ
Number of Associated Samples 141
Number of Associated Scaffolds 161

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.63 %
% of genes near scaffold ends (potentially truncated) 97.52 %
% of genes from short scaffolds (< 2000 bps) 93.17 %
Associated GOLD sequencing projects 127
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (96.894 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(8.696 % of family members)
Environment Ontology (ENVO) Unclassified
(29.193 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.963 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 34.74%    β-sheet: 0.00%    Coil/Unstructured: 65.26%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 161 Family Scaffolds
PF00072Response_reg 39.13
PF12802MarR_2 22.36
PF06925MGDG_synth 13.04
PF00877NLPC_P60 7.45
PF03006HlyIII 3.73
PF09339HTH_IclR 2.48
PF13692Glyco_trans_1_4 1.24
PF13302Acetyltransf_3 1.24
PF01522Polysacc_deac_1 0.62
PF01978TrmB 0.62
PF00118Cpn60_TCP1 0.62
PF00313CSD 0.62
PF12844HTH_19 0.62

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 161 Family Scaffolds
COG0707UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferaseCell wall/membrane/envelope biogenesis [M] 13.04
COG0791Cell wall-associated hydrolase, NlpC_P60 familyCell wall/membrane/envelope biogenesis [M] 7.45
COG1272Predicted membrane channel-forming protein YqfA, hemolysin III familyIntracellular trafficking, secretion, and vesicular transport [U] 3.73
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 0.62
COG0726Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 familyCell wall/membrane/envelope biogenesis [M] 0.62

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.89 %
UnclassifiedrootN/A3.11 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918008|ConsensusfromContig134634All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2294Open in IMG/M
3300001536|A1565W1_10560848All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria698Open in IMG/M
3300001537|A2065W1_11864455All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria608Open in IMG/M
3300001538|A10PFW1_11007071All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria602Open in IMG/M
3300001686|C688J18823_10378705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria918Open in IMG/M
3300002568|C688J35102_119295403All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria669Open in IMG/M
3300002568|C688J35102_120731887All Organisms → cellular organisms → Bacteria1440Open in IMG/M
3300003992|Ga0055470_10003748All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2031Open in IMG/M
3300004153|Ga0063455_100662257All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria694Open in IMG/M
3300005184|Ga0066671_10546840All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria746Open in IMG/M
3300005327|Ga0070658_10048830All Organisms → cellular organisms → Bacteria3427Open in IMG/M
3300005329|Ga0070683_101997749All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia557Open in IMG/M
3300005336|Ga0070680_100754727All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria838Open in IMG/M
3300005337|Ga0070682_100550394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria903Open in IMG/M
3300005337|Ga0070682_100878491All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300005338|Ga0068868_101741179All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria588Open in IMG/M
3300005339|Ga0070660_100161166All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1808Open in IMG/M
3300005339|Ga0070660_101253511All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria629Open in IMG/M
3300005341|Ga0070691_10163179All Organisms → cellular organisms → Bacteria1150Open in IMG/M
3300005344|Ga0070661_101336465All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria602Open in IMG/M
3300005366|Ga0070659_100910759All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria769Open in IMG/M
3300005366|Ga0070659_101683902All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia567Open in IMG/M
3300005367|Ga0070667_102171456All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria523Open in IMG/M
3300005435|Ga0070714_100772507All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria929Open in IMG/M
3300005436|Ga0070713_102208581All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria533Open in IMG/M
3300005437|Ga0070710_10700291All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria715Open in IMG/M
3300005439|Ga0070711_101872124All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria527Open in IMG/M
3300005454|Ga0066687_10258836All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales973Open in IMG/M
3300005455|Ga0070663_101259956All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria651Open in IMG/M
3300005458|Ga0070681_11209729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria677Open in IMG/M
3300005518|Ga0070699_101239727All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia684Open in IMG/M
3300005529|Ga0070741_10786627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria832Open in IMG/M
3300005530|Ga0070679_100180191All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2085Open in IMG/M
3300005530|Ga0070679_100380646All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1358Open in IMG/M
3300005530|Ga0070679_101475665All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia627Open in IMG/M
3300005535|Ga0070684_100535607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1086Open in IMG/M
3300005535|Ga0070684_100568779All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1053Open in IMG/M
3300005538|Ga0070731_11152503All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria512Open in IMG/M
3300005539|Ga0068853_102210504Not Available533Open in IMG/M
3300005556|Ga0066707_10707627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria631Open in IMG/M
3300005569|Ga0066705_10580827All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria690Open in IMG/M
3300005577|Ga0068857_101565342All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria643Open in IMG/M
3300005578|Ga0068854_100935007All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria764Open in IMG/M
3300005607|Ga0070740_10362441All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria568Open in IMG/M
3300005614|Ga0068856_102123610All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300005718|Ga0068866_10846139All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria639Open in IMG/M
3300005764|Ga0066903_100997976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1530Open in IMG/M
3300006028|Ga0070717_11870861All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria542Open in IMG/M
3300006175|Ga0070712_100836384All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300006237|Ga0097621_100525614All Organisms → cellular organisms → Bacteria → Proteobacteria1074Open in IMG/M
3300006237|Ga0097621_101880598All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria571Open in IMG/M
3300006800|Ga0066660_10862189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales738Open in IMG/M
3300006800|Ga0066660_11649005All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria509Open in IMG/M
3300006804|Ga0079221_10550895All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales763Open in IMG/M
3300006804|Ga0079221_10612452All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria737Open in IMG/M
3300006806|Ga0079220_10549481All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria805Open in IMG/M
3300006954|Ga0079219_11970637All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia554Open in IMG/M
3300009137|Ga0066709_102081286All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria785Open in IMG/M
3300009148|Ga0105243_12151798All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria594Open in IMG/M
3300009148|Ga0105243_12904360All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria519Open in IMG/M
3300009174|Ga0105241_10745164All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales898Open in IMG/M
3300009176|Ga0105242_10513874All Organisms → cellular organisms → Bacteria1141Open in IMG/M
3300009545|Ga0105237_10653577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1058Open in IMG/M
3300009551|Ga0105238_11513286All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria700Open in IMG/M
3300010048|Ga0126373_10864599All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300010373|Ga0134128_12550979All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria563Open in IMG/M
3300010396|Ga0134126_12927394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria516Open in IMG/M
3300010399|Ga0134127_13053889All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia546Open in IMG/M
3300011971|Ga0120175_1011002All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1218Open in IMG/M
3300012001|Ga0120167_1080476All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria679Open in IMG/M
3300012008|Ga0120174_1030596All Organisms → cellular organisms → Bacteria1621Open in IMG/M
3300012208|Ga0137376_11509838All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria563Open in IMG/M
3300012925|Ga0137419_10434413All Organisms → cellular organisms → Bacteria1032Open in IMG/M
3300012927|Ga0137416_10624308All Organisms → cellular organisms → Bacteria941Open in IMG/M
3300012944|Ga0137410_11546911All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria580Open in IMG/M
3300012951|Ga0164300_10170841All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300012955|Ga0164298_10141909All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1337Open in IMG/M
3300012955|Ga0164298_10209003All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1147Open in IMG/M
3300012957|Ga0164303_10614154All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria718Open in IMG/M
3300012984|Ga0164309_10730024All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300012986|Ga0164304_10106691All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1682Open in IMG/M
3300012989|Ga0164305_10958810All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria724Open in IMG/M
3300013307|Ga0157372_10858079All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1054Open in IMG/M
3300013770|Ga0120123_1025224All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1215Open in IMG/M
3300014166|Ga0134079_10132636All Organisms → cellular organisms → Bacteria987Open in IMG/M
3300014497|Ga0182008_10684331All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia584Open in IMG/M
3300014745|Ga0157377_10605940All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria782Open in IMG/M
3300014827|Ga0120171_1041702All Organisms → cellular organisms → Bacteria1482Open in IMG/M
3300015262|Ga0182007_10029798All Organisms → cellular organisms → Bacteria1868Open in IMG/M
3300015264|Ga0137403_10890818All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria740Open in IMG/M
3300015371|Ga0132258_10287805All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4035Open in IMG/M
3300015372|Ga0132256_100598050All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1217Open in IMG/M
3300015372|Ga0132256_103223649Not Available549Open in IMG/M
3300015373|Ga0132257_101738351All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria800Open in IMG/M
3300016294|Ga0182041_11737608All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300016387|Ga0182040_10716221All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300017937|Ga0187809_10300616All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria591Open in IMG/M
3300017961|Ga0187778_10575282All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria753Open in IMG/M
3300018058|Ga0187766_10299781All Organisms → cellular organisms → Bacteria1041Open in IMG/M
3300018468|Ga0066662_10022430All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter3574Open in IMG/M
3300020081|Ga0206354_10454511All Organisms → cellular organisms → Bacteria → Acidobacteria1733Open in IMG/M
3300024232|Ga0247664_1066496All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300024331|Ga0247668_1066492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria729Open in IMG/M
3300025899|Ga0207642_10854794All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria581Open in IMG/M
3300025904|Ga0207647_10368732All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium812Open in IMG/M
3300025906|Ga0207699_10072161All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2114Open in IMG/M
3300025906|Ga0207699_10691262All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria746Open in IMG/M
3300025909|Ga0207705_10801610All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia731Open in IMG/M
3300025911|Ga0207654_11045434All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria594Open in IMG/M
3300025912|Ga0207707_11216129Not Available609Open in IMG/M
3300025916|Ga0207663_10017368All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter4008Open in IMG/M
3300025917|Ga0207660_10597755All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria898Open in IMG/M
3300025932|Ga0207690_10952953All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria713Open in IMG/M
3300025932|Ga0207690_11454902All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia573Open in IMG/M
3300025939|Ga0207665_10433898All Organisms → cellular organisms → Bacteria1006Open in IMG/M
3300025944|Ga0207661_10229338All Organisms → cellular organisms → Bacteria1644Open in IMG/M
3300025949|Ga0207667_10776042All Organisms → cellular organisms → Bacteria956Open in IMG/M
3300025986|Ga0207658_11899815All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria542Open in IMG/M
3300026116|Ga0207674_11501185All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria643Open in IMG/M
3300026142|Ga0207698_11814174All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia625Open in IMG/M
3300026552|Ga0209577_10115464All Organisms → cellular organisms → Bacteria2157Open in IMG/M
3300027765|Ga0209073_10426591All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria548Open in IMG/M
3300027826|Ga0209060_10393449All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300028536|Ga0137415_10550708All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium963Open in IMG/M
3300028654|Ga0265322_10031676All Organisms → cellular organisms → Bacteria1509Open in IMG/M
3300028666|Ga0265336_10263993All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria511Open in IMG/M
3300028720|Ga0307317_10048682All Organisms → cellular organisms → Bacteria1355Open in IMG/M
3300028720|Ga0307317_10322880All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria522Open in IMG/M
3300028799|Ga0307284_10115423All Organisms → cellular organisms → Bacteria1015Open in IMG/M
3300028881|Ga0307277_10386481All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria625Open in IMG/M
3300028885|Ga0307304_10339328All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria670Open in IMG/M
3300029957|Ga0265324_10051778All Organisms → cellular organisms → Bacteria1410Open in IMG/M
3300030010|Ga0302299_10670548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria510Open in IMG/M
3300031152|Ga0307501_10063384All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria858Open in IMG/M
3300031240|Ga0265320_10540271All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria515Open in IMG/M
3300031543|Ga0318516_10285623All Organisms → cellular organisms → Bacteria954Open in IMG/M
3300031640|Ga0318555_10119448All Organisms → cellular organisms → Bacteria1399Open in IMG/M
3300031712|Ga0265342_10228786All Organisms → cellular organisms → Bacteria999Open in IMG/M
3300031716|Ga0310813_12013926All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia545Open in IMG/M
3300031771|Ga0318546_11293620All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300031939|Ga0308174_10819697All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria782Open in IMG/M
3300031939|Ga0308174_11454850All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria587Open in IMG/M
3300031996|Ga0308176_11960553All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia625Open in IMG/M
3300031996|Ga0308176_12578825All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria541Open in IMG/M
3300032001|Ga0306922_10758056All Organisms → cellular organisms → Bacteria1018Open in IMG/M
3300032009|Ga0318563_10359381All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300032010|Ga0318569_10200242All Organisms → cellular organisms → Bacteria925Open in IMG/M
3300032010|Ga0318569_10483250All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300032065|Ga0318513_10109769All Organisms → cellular organisms → Bacteria1296Open in IMG/M
3300032074|Ga0308173_10573352All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1019Open in IMG/M
3300032074|Ga0308173_11220486All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria703Open in IMG/M
3300032893|Ga0335069_10308037All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1883Open in IMG/M
3300032955|Ga0335076_11105826All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria675Open in IMG/M
3300033004|Ga0335084_12208907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria533Open in IMG/M
3300033158|Ga0335077_10865881All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria914Open in IMG/M
3300033290|Ga0318519_10725567All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300033803|Ga0314862_0183499All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300033805|Ga0314864_0022574All Organisms → cellular organisms → Bacteria1320Open in IMG/M
3300034268|Ga0372943_0257770All Organisms → cellular organisms → Bacteria1097Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil8.70%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere8.07%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.45%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.83%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere6.21%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost4.97%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.35%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.73%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.11%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.11%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere3.11%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.48%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.48%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.48%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.86%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.24%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland1.24%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.24%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.24%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.24%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.24%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.24%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.24%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.62%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.62%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.62%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.62%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.62%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.62%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.62%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.62%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.62%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918008Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_allEnvironmentalOpen in IMG/M
3300001536Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001537Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003992Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005607Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011971Permafrost microbial communities from Nunavut, Canada - A7_80cm_12MEnvironmentalOpen in IMG/M
3300012001Permafrost microbial communities from Nunavut, Canada - A24_80cm_12MEnvironmentalOpen in IMG/M
3300012008Permafrost microbial communities from Nunavut, Canada - A39_80cm_12MEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013770Permafrost microbial communities from Nunavut, Canada - A15_5cm_18MEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014497Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014827Permafrost microbial communities from Nunavut, Canada - A3_80cm_18MEnvironmentalOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024232Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05EnvironmentalOpen in IMG/M
3300024331Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027826Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028654Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaGHost-AssociatedOpen in IMG/M
3300028666Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaGHost-AssociatedOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300029957Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaGHost-AssociatedOpen in IMG/M
3300030010Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031240Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaGHost-AssociatedOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031712Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaGHost-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032009Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032039Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M
3300033803Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10EnvironmentalOpen in IMG/M
3300033805Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10EnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Bog_all_C_041423902140918008SoilLREAWKRAVPFNQRVDELLQSDRQLLGGTCVPYGELGDPDISPHWPPVQTRHQ
A1565W1_1056084813300001536PermafrostLGRSYRLAWRRAVPSNPRVNELLIADKQLLNGQCVPYGDLGDPDISPHWPPVKTTHQ*
A2065W1_1186445523300001537PermafrostAGHPFVVHSDTRLPPHALLRLGESLRRAWKQAVPSNRRVDELLLADRQLLPGPPGCVPYGELGDPDISPHWPPAKTRHQ*
A10PFW1_1100707113300001538PermafrostGGYFAVRSRTQLAPRALIREGLQLRLAWKRAVPFNRRVDELVLADRSALAGTCVPYGDLGDPGISPHWPPAKTTHQ*
C688J18823_1037870513300001686SoilAPPRALLRTGLRLRRTWKAAVPLNKRVDELILSDRRLLSGTCIPYGELGDPDISPHWPPAKTTHQ*
C688J35102_11929540313300002568SoilAYRLAWRRAVPANRRVDELLHADRQLLAGHCEPYGDLGDPAISPHWPPVKTTHQ*
C688J35102_12073188713300002568SoilGHYFVVRSTRPEGPRALIRDGLSLRRRWKRAVPFNRRVDELLISDSQLLAGTCVPYGDLGDPDISPHWPPVATSHQ*
Ga0055470_1000374813300003992Natural And Restored WetlandsETAAAAKAFGIAPAVGGYFAIRSSRPLPPRALVREGIRLRVAWKQAVPLNRRVDKLLLADRTALAGTCVPYGDLGDPGISPHWPPVATTHQ*
Ga0063455_10066225723300004153SoilRLGQAYRLAWRRAVPTNRRVNELLRADRQLLAGHCVPYGDLGDPAISPHWPPVKTTHQ*
Ga0066671_1054684023300005184SoilYFLLRSPGKLTPARLIHLGQAYRLAWRRAVPSNSRVNELLIADRQLLRGRCVPYGDLGDPAISPHWPPARTSHQ*
Ga0070658_1004883013300005327Corn RhizosphereYFVVRSRGRLQPRELIALGRRARLAWKRAVPLNRRVDELLQADRQLLADRPVCVPYGDLGDPDISPHWPPVKTTHQ*
Ga0070683_10199774923300005329Corn RhizosphereARLAPRALVREGVRLRLAWKRAVPFNRRVDELLIADRSALAGTCVPYGDLGDPGISPHWPPVKTTHQ*
Ga0070680_10075472733300005336Corn RhizospherePIGGHYFAVRSRTALAPRALVREGLRLRLAWKRAVPFNRRVDELLIADRSALAGTCVPYGDLGDPGISPHWPPAKTTHQ*
Ga0070682_10055039433300005337Corn RhizosphereLGTSPIGGHYFVVRSAEPLVPRALVREGERLRLAWKQAVPLNIRVDELLIADRSALAGTCVPYGDLGDPGISPHWPPVKTTHQ*
Ga0070682_10087849133300005337Corn RhizosphereEPTGGHYFAVRSRTPLAPRALVLEGVRLRLAWKRAVPFNRRVDELLIADRSALAGTCLPYGDLGDPGISPHWPPVKTTHQ*
Ga0068868_10174117913300005338Miscanthus RhizosphereVQEIGGHYFVVRSKAPLPPRTAIALGQSLRVAWRRAVPLNRRVNELLQADRQLLRRPPTCTPYGELGDPGISPHWPPVKTTHQ*
Ga0070660_10016116613300005339Corn RhizosphereSRTALSPRALVREGVRLRLAWKRAVPLNRRVDELLIADRSALAGTCAPYGDLGDPGISPHWPPVKTTHQ*
Ga0070660_10125351123300005339Corn RhizosphereSAARTALRIRGASVQEIDGHYFVVRSRAPLAPRAAIRLGQSLRLAWRRAVPLNRRVNELLQADRQLLRTPPVCRRYGELGDPGISPHWPPVKTTHQ*
Ga0070691_1016317913300005341Corn, Switchgrass And Miscanthus RhizosphereRSPRRLTPVGLIRLGQAYRLLWRRAVPSNRRVNELLIADRQLLRGRCVPYGDLGDPAISPHWPPVKTTHQ*
Ga0070661_10133646513300005344Corn RhizosphereLIRLGRSLRLAWRRAVPLNRRVNELLQADRRLLRGTCVPYGELGDPDISPHWPPVLTRHQ
Ga0070659_10091075933300005366Corn RhizosphereGHYFAVRSRTPLAPRALVREGVRLRLAWKRAAPFNRRVDELLGADRSALAGTCVPYGDLGDPGISPHWPPVKTTHQ*
Ga0070659_10168390213300005366Corn RhizosphereAAAAEGALGVEPVAGRYFVVRSRTALSPRALVREGVRLRLAWKRAVPLNRRVDELLIADRSALAGTCAPYGDLGDPGISPHWPPVKTTHQ*
Ga0070667_10217145623300005367Switchgrass RhizosphereRGYFLVRSPRRLTPVGLIRLGQAYRLLWRRAVPSNRRVNELLIADRQLLRGRCVPYGDLGDPAISPHWPPVKTTHQ*
Ga0070714_10077250733300005435Agricultural SoilAPRALVREGVGLRVVWKKAVPFNRRVDELLIADRSALAGTCVPYGDLGDPGISPHWPPVKTTHQ*
Ga0070713_10220858123300005436Corn, Switchgrass And Miscanthus RhizosphereGHYFVVHSADRLPPRALIRLGRSLRTAWKRAVPSNRRVDELLIADRQLLGMPVTCVPYGELGDPDISPHWPPVTTRHQ*
Ga0070710_1070029113300005437Corn, Switchgrass And Miscanthus RhizosphereSLRTAWKRAVPSNRRVDELLIADRQLLGMPGRCVPYGELGDPDISPHWPPVTTRHQ*
Ga0070711_10187212423300005439Corn, Switchgrass And Miscanthus RhizosphereIRLGQAYRLLWRRAVPLNGRVNELLIADRQLLRGHCVPYGDLGDPGISPHWPPARTTHQ*
Ga0066687_1025883633300005454SoilRIGRSLRLTWRHAVPLNRRVNELLQADRQLLRTPSVCKPYGDLGDPGISPHWPPVKTTHQ
Ga0070663_10125995613300005455Corn RhizosphereAYFLLRSPARLAPEALIRLGRSYRLAWRDAVPSNRRVNELLIADNELLKGVCVPYGDLGDPDISPHWPPVKTTHQ*
Ga0070681_1120972933300005458Corn RhizosphereAERALGAEPAGGHYFAVRSRTRLAPRALVREGVRLRLAWKRAVPFNRRVDELLIADRSALAGTCVPYGDLGDPGISPHWPPVKTTHQ*
Ga0070699_10123972713300005518Corn, Switchgrass And Miscanthus RhizosphereEATAATRAFDEDPIDGHYFTIRSRRPLPPRALIRLGLRLRTMWKSAVPANRRVDELLIADRQLLAGRCVPYGDLGDPDISPHWPPVKTTHQ*
Ga0070741_1078662733300005529Surface SoilALVREGIRLRTLWKRAVPINRRVDELLIADRSALAGTCVPYGDLGDPDISPHWPPVKTTHQ*
Ga0070679_10018019113300005530Corn RhizosphereGGHYFAVRSRTPLLPRALVREGVRLRVAWKQAVPFNRRVDELLIADRSALAGTCVPYGDLGDPGISPHWPPVKTTHQ*
Ga0070679_10038064613300005530Corn RhizosphereRSRSPLAPRALVREGLRLRLAWKRAVPFNRRVDELLIADRSALAGTCVPYGDLGDPGISPHWPPAKTTHQ*
Ga0070679_10147566523300005530Corn RhizosphereTVAAEQALGAEPTGGHYFAVRSRTPLAPRALVLEGVRLRLAWKRAVPFNRRVDELLIADRSALAGTCLPYGDLGDPGISPHWPPVKTTHQ*
Ga0070684_10053560713300005535Corn RhizospherePVAGRYFVVRSRTALSPRALVREGVRLRLAWKRAVPLNRRVDELLIADRSALAGTCAPYGDLGDPGISPHWPPVKTTHQ*
Ga0070684_10056877933300005535Corn RhizosphereLVREGERLRLAWKQAVPLNIRVDELLIADRSALAGTCVPYGDLGDPGISPHWPPVKTTHQ
Ga0070731_1115250313300005538Surface SoilAAAQKALGVAPVAGHYFVVRSPKPLPPRALVELGRTLRARWKAAVPLNQRVDELLQSDRQLLAGTCVPYGDLGDPDINPVWPPLPTPHQ*
Ga0068853_10221050423300005539Corn RhizosphereLAPRALVREGVRLRLAWKKAVPLNRRVDELLIADRSALAGRCVPYGDLGDPGISPHWPPAKTTHQ*
Ga0066707_1070762713300005556SoilLVRSPRKLRPEQLVRLGQAYRLAWRRAVPTNRRVNELLRADRQLLAGHCVPYGDLGDPAISPHWPPVKTTHQ*
Ga0066705_1058082713300005569SoilSRRALPPRELVRLGRSLRLTWRHAVPLNRRVNELLQADRQLLRTPSVCKPYGDLGDPGISPHWPPVKTTHQ*
Ga0068857_10156534213300005577Corn RhizospherePVGGHYFVVRSRRPLPPRALIRLGLRLRLAWRGAVPLNRRVDELLQADRQLLAGTCVPYGELGDPDISPHWPPATTRHQ*
Ga0068854_10093500733300005578Corn RhizosphereVARAGRGYFVVRSRGRLQPRELIALGRRARLAWKRAVPLNRRVDELLQADRQLLADRPVCVPYGDLGDPDISPHWPPVKTTHQ*
Ga0070740_1036244113300005607Surface SoilYFVVRSAPLPPRALIRQGLRLRLAWQRAVPLNRRVAELVQSDRELLAGSCTPYGVLGDPDIDPVWPPLPSVHQ*
Ga0068856_10212361013300005614Corn RhizosphereGFVVVRSKPLPPRALVAEGLRLRRAWKRLVPENRRVDELLIADRQLLAGRCVPYGDLGDPDISPHWPPVRTTHQ*
Ga0068866_1084613913300005718Miscanthus RhizosphereVAGHYFVVRSRTPLAPRAAIRLGQSLRLAWRRAVPLNRRVNELLQADRQLLRTPPVCRPYGELGDPGISPHWPPVKTSHQ*
Ga0066903_10099797643300005764Tropical Forest SoilTVQALDQGYFVVRSTKALRPRALVALGRAVRRTWRSAVPQNVRVNELLQADRQLLRVPVTCKPYGVLDDPDISPHWPPVKTTQQ*
Ga0070717_1187086113300006028Corn, Switchgrass And Miscanthus RhizosphereVAAAQAALGTAPVAGHYFAVRSARPLPPRALVREGIRLRLRWKRAVPLNRRVDELLLADRSALGGTCAPYGDLGDPDISPHWPPVKTTHQ*
Ga0070712_10083638433300006175Corn, Switchgrass And Miscanthus RhizosphereRPAPGYFLVRSPRKLAPAQLVRLGQAYRLAWRRAVPTNGRVNELLQADRELLAGRCIPYGDLGDPAISPHWPPVKTTHQ*
Ga0097621_10052561413300006237Miscanthus RhizosphereRLPGVTVHEVRGHYFVVNSRTPLAPRAAIRLGQALRIAWRRAAPLNRRVNELLQADRQLLRVPPACRPYGELGDPGISPHWPPVKTTHQ*
Ga0097621_10188059823300006237Miscanthus RhizosphereTVVRPGRGYFLVRSPRRLTPVGLIRLGQAYRLLWRRAVPSNRRVNELLIADRQLLRGRCVPYGDLGDPAISPHWPPVKTTHQ*
Ga0066660_1086218933300006800SoilLGRSLRLTWRRAVPLNRRVNELLQADRQLLRTPPVCTPYGDLGDPGISPHWPPVKTTHQ*
Ga0066660_1164900513300006800SoilLLRSPGKLTPARLIHLGQAYRLAWRRAVPSNSRVNELLIADRQLLRGRCVPYGDLGDPAISPHWPPARTSHQ*
Ga0079221_1055089533300006804Agricultural SoilRRAFAGVNDVGVREVKGHYFVVSSRRALPPRELVRLGRSLRLTWRHAVPLNRRVNELLQADRQLLRSPPVCRPYGDLGDPGISPHWPPVKTTHQ*
Ga0079221_1061245223300006804Agricultural SoilVRSRTPLAPRALVREGLRLRLAWKRAVPLNRRADELVIADRSALAGRCVPYGDLGDPGISPHWPPVKTTHQ*
Ga0079220_1054948113300006806Agricultural SoilGQRLRLAWRGAVPLNRRVNELLQADRQLLRRPPACTPYGELGDPGISPHWPPVKTSHQ*
Ga0079219_1197063713300006954Agricultural SoilAVRSRTPLAPRALVREGLRLRVAWKKAVSFNRRVDELLVADRSALAGTCVPYGDLGDPGISPHWPPVKTTHQ*
Ga0066709_10208128623300009137Grasslands SoilRAYFVVRSSRALRPRALVALGRSVRLTWRAAVPQNKRVNELLQADRQLLRTPPACKPYGELDDPGISPHWPPLATSHQ*
Ga0105243_1215179813300009148Miscanthus RhizosphereLVRSPRRLTPVGLIRLGQAYRLLWRRAVPSNRRVNELLIADRQLLRGRCVAYGDLGDPAISPHWPPVKTTHQ*
Ga0105243_1290436013300009148Miscanthus RhizosphereDGHYFVVRSRAPLAPRAAIRLGQSLRLAWRRAVPLNRRVNELLQADRQLLRTPPVCRRYGELGDPGISPHWPPVKTTHQ*
Ga0105241_1074516433300009174Corn RhizosphereFDTDPVGGHYFAIRSRRPLPPRALIREGIRLRELWKREVPVNRRVDELLQADRQLLAGRCVPYGDLGDPDISPHWPPVKTTHQ*
Ga0105242_1051387413300009176Miscanthus RhizosphereYRLLWRRAVPSNRRVNELLIADRQLLRGRCVPYGDLGDPAISPHWPPVKTTHQ*
Ga0105237_1065357753300009545Corn RhizosphereIRLGLRLRLAWRGAVPLNRRVDELLQADRQLLAGTCVPYGELGDPDISPHWPPATTRHQ*
Ga0105238_1151328623300009551Corn RhizosphereIDGRYFAVRSRAPLAPRALVREGVRLRLAWKTAVPLNRRVDELLIADRSALAGSCVPYGDLGDPGISPHWPPVKTTHQ*
Ga0126373_1086459913300010048Tropical Forest SoilRSPKPLAPRALIGLGEKLRERWKQAVPLNQRVDELLQSDRQLLAGTCVPYGDLGDPDIDPVWPPLPSPHQ*
Ga0134128_1255097913300010373Terrestrial SoilGQRLRLAWRAAVPLNRRVNELLQADRQLLRRPPVCTPYGELGDPGISPHWPPVKTSHQ*
Ga0134126_1292739413300010396Terrestrial SoilYFVVRSVERRSPRGLIVLGRSLRWAWQRAVPANRRVQELLIADAQLLRTPPRCVPYGDLGDPDISPHWPPVKTTHQ*
Ga0134127_1305388923300010399Terrestrial SoilAERALGAEPAGGHYFAVRSRARLAPRALVREGVRLRLAWKRAVPFNRRVDELLIADRSALAGTCVPYGDLGDPGISPHWPPVKTTHQ*
Ga0120175_101100213300011971PermafrostRHYFVVRSEARLPPRALIQLGESLRRVWKRAVPSNHRVDELLLADRELLRGSPGCPAYGELGDPDISPHWPPATTRHQ*
Ga0120167_108047613300012001PermafrostPRDLIQLGESLRQVWKRAVPSNHRVDELLLADRQLLQSPPRCIPYGELGDPDISPHWPPVATRHQ*
Ga0120174_103059613300012008PermafrostIQLGESLRQVWKRAVPSNHRVDELLLADRQLLQSPPRCIPYGELGDPDISPHWPPVATRHQ*
Ga0137376_1150983813300012208Vadose Zone SoilIREGLALRERWKRAVPFNQRVDELLISDRQLLRGTCVPYGDLGDPDISPHWPPALGRHQ*
Ga0137419_1043441333300012925Vadose Zone SoilVVRPGPGYFLLRSPRKLAPLGLIRLGRAYRLAWRRAVPSNRRVNELLIADRQLLRGRCIPYGDLGDPGISPHWPPARTSHQ*
Ga0137416_1062430833300012927Vadose Zone SoilISLGQSLRRTWRSAVPQNLRVNELLQADRQLLQTPPACKPYGDLGDPGISPHWPPVATTHQ*
Ga0137410_1154691113300012944Vadose Zone SoilLALRERWKRAVPFNQRVDELLISDRQLLRGTCVPYGDLGDPDISPHWPPVKTTHQ*
Ga0164300_1017084113300012951SoilLVRSPRRLTPVGLIRLGQAYRLLWRRAVPSNRRVNELLIADRQLLRGRCVPYGDLGDPAISPHWPPVKTTHQ*
Ga0164298_1014190933300012955SoilEPLAPRALVREGERLRLAWKQAVPLNIRVDELLIADRSALAGTCVPYGDLGDPGISPHWPPVKTTHQ*
Ga0164298_1020900313300012955SoilSRAALEPRALVGLGQRLRIAWRRAVPMNRRVNELLQADRQLLRQPPVCTPYGELGDPGISPHWPPVKTTHQ*
Ga0164303_1061415413300012957SoilPRAAIRLGQSLRIAWRRAAPLNKRVNELLQADRQLLRVPPVCRPYGELGDPGISPHWPPVKTTHQ*
Ga0164309_1073002413300012984SoilRIAWRRAVPMNRRVNELLQADRQLLRQPPVCTPYGELGDPGISPHWPPVKTTHQ*
Ga0164304_1010669153300012986SoilRSRRALAPRALVALGQSVRLAWRAAVPQNLRVNELLQADRQLLHTPPACKPYGELDDPGISPHWPPVTTTHQ*
Ga0164305_1095881033300012989SoilERLRLAWKQAVPLNIRVDELLIADRSALAGTCVPYGDLGDPGISPHSPPVKTTHQ*
Ga0157372_1085807943300013307Corn RhizosphereRPLPPRALIRLGLRLRLAWRGAVPLNRRVDELLQADRQLLAGTCVPYGELGDPDISPHWPPATTRHQ*
Ga0120123_102522413300013770PermafrostERAAARRAFAQLDGATAEEVAGGYFVVRSRRALPPRALISLGRSLRLTWRAAVPLNQRVNELLQADRQLLRTPVVCAPYGDLGDPAISPHWPPVATTHQ*
Ga0134079_1013263623300014166Grasslands SoilRPLRPRALIALGIRLRERCKRRVPENHRVDELLVADRELLAGRCAAYGDLGDPDITPHWPPVKTTHQ*
Ga0182008_1068433113300014497RhizosphereAARRAFAGVRGAETREVKEHYFVVRSRRALAPRELVGLGRSLRLAWRGAVPLNHRVNELLQADRQLLRTPPACKPYGDLGDPGISPHWPPVKTTHQ*
Ga0157377_1060594033300014745Miscanthus RhizosphereLPPRTAIALGQSLRVAWRRAVPLNRRVNELLQADRQLLRRPPTCTPYGELGDPGISPHWPPVKTTHQ*
Ga0120171_104170213300014827PermafrostPGPLIRLGRSYRLAWRGAVPSNRRVNELLIADKQLLNGQCVPYGDLGDPDISPHWPPVKTTHQ*
Ga0182007_1002979843300015262RhizosphereAPPRELIRTGLELRRRWKGAVPLNKRVDELILADRQLLAGTCVPYGELGDPDISPHWPRAKTRHQ*
Ga0137403_1089081833300015264Vadose Zone SoilRSYRLAWRDAVPSNRRVNELLIADRQLLRGRCTPYGDLGDPDISPHWPPVKTTHQ*
Ga0132258_1028780513300015371Arabidopsis RhizospherePIGGRYFAVRSRTALAPSALVREGLRLRAAWKRAVPLNRRVDELLVAGRSALAGTCVPYGDLGDPGISPHWPPVKTTHQ*
Ga0132256_10059805033300015372Arabidopsis RhizosphereLIREGIRLRELWKREVPVNRRVDELLQADRQLLAGRCVPYGDLGDPDISPHWPPVKTTHQ
Ga0132256_10322364913300015372Arabidopsis RhizosphereRSRSPLGPRALVREGLRLRLAWKRAVPLNRRVDELLVAGRSALAGTCVPYGDLGDPGISPHWPPVKTTHQ*
Ga0132257_10173835133300015373Arabidopsis RhizosphereVRSRAPLAPRAAVRLGRSLRLAWRDAVPLNRRVNELLQADRQLLRTPPVCRPYGELGDPGISPHWPPVKTTHQ*
Ga0182041_1173760813300016294SoilRELIALGQSLRRRWKHAVPANTRVDELLIADRQLLQRPPRCMPYGELGDPDISPHWPPVKTSHQ
Ga0182040_1071622113300016387SoilQVKRHYFVVRSRSALPPRELIALGQSLRRRWKHAVPANTRVDELLIADRQLLQRPPRCMPYGELGDPDISPHWPPVKTSHQ
Ga0187809_1030061613300017937Freshwater SedimentPDEAAAAEKALGVAPVAGHYFVVRSPKRLPPRALIELGRTLRSRWKAAVPLNKRVDELLESDRQLLAGTCVPYGDLGDPAINPVWPRLPTAHQ
Ga0187778_1057528213300017961Tropical PeatlandEAAAATRALGAHPIHGHYFVVRSRRALPPRQLIRLGRSLRLAWKRAVPSNRRVDELLQSDRELLDGTCVPYGELGDPDISPHWPPVKTRHQ
Ga0187766_1029978113300018058Tropical PeatlandPRQLIRLGRSLRLAWKRAVPSNRRVDELLQSDRELLDGTCVPYGELGDPDISPHWPPVKTRHQ
Ga0066662_1002243073300018468Grasslands SoilLRLRRAWKTAVPLNKRVDELILADRQLLGAATCAPYGDLGDPDISPHWPPVKTTHQ
Ga0206354_1045451133300020081Corn, Switchgrass And Miscanthus RhizosphereGHYFVVRSPRPLPPRALIRLGLRLRLAWRGAVPLNRRVDELLQADRQLLAGTCVPYGELGDPDISPHWPPATTRHQ
Ga0247664_106649613300024232SoilPIEGHYFVVTSVGTPRLLIAEGLVLRRQWKTAVPFNRRVQELIVSDQQLLAGTCVPYGDLGDPDTNPHWPPVKTTHQ
Ga0247668_106649223300024331SoilAPEALIRLGRAYRLAWRAAVPSNPRVNELLIADNELLKGHCVPYGDLGDPDISPHWPPATTTHQ
Ga0207642_1085479423300025899Miscanthus RhizosphereALIRLGQSVRLVWRRAVPVYRRVNELLQADRQLLRTPPLCKPYGDLGDPGISPHWPPVKTSHQ
Ga0207647_1036873213300025904Corn RhizosphereHYFAVRSRARLAPRALVREGVRLRLAWKRAVPFNRRVDELLIADRSALAGTCVPYGDLGDPGISPHWPPVKTTHQ
Ga0207699_1007216143300025906Corn, Switchgrass And Miscanthus RhizosphereRSVGGHYFAIRSRRPLPPRALIREGIRLRELWKREVPVNRRVDELLQADRQLLAGRCVPYGDLGDPDISPHWPPVKTTHQ
Ga0207699_1069126213300025906Corn, Switchgrass And Miscanthus RhizosphereHGGYFVVRSQAKLRPRALVAVGQRLRLAWRAAVPQNKRVNELLQADRQLLRTPAVCKPYGELDDPGISPHWPPATTTHQ
Ga0207705_1080161033300025909Corn RhizosphereVRSRTPLAPRALVLEGLRLRLAWKRAVPFNRRVDELLIADRSALAGTCVPYGDLGDPGISPHWPPAKTTHQ
Ga0207654_1104543423300025911Corn RhizosphereEPIGGRYFAVRSRAPLAPRALVREGVRLRLAWKKAVPLNRRVDELLIADRSALAGRCVPYGDLGDPGISPHWPPVKTTHQ
Ga0207707_1121612933300025912Corn RhizosphereYFAVRLRAPLAPRALVREGVRLRLAWKKAVPLNRRVDELLIADRSALAGSCVPYGDLGDPGISPHWPPVKTTHQ
Ga0207663_1001736863300025916Corn, Switchgrass And Miscanthus RhizosphereQKALGAAPIAGHYFAVRSTRPLTPGALVREGIRLRLLWKQAVPFNKRVDELLIADRSALRGACVAYGDLGDPDISPHWPPVKTTHQ
Ga0207660_1059775533300025917Corn RhizospherePIGGHYFAVRSRTALAPRALVREGLRLRLAWKRAVPFNRRVDELLIADRSALAGTCVPYGDLGDPGISPHWPPAKTTHQ
Ga0207690_1095295333300025932Corn RhizosphereALVREGVRLRLAWKRAAPFNRRVDELLGADRSALAGTCVPYGDLGDPGISPHWPPVKTTH
Ga0207690_1145490223300025932Corn RhizosphereDEAAAAEGALGVEPVAGRYFVVRSRTALSPRALVREGVRLRLAWKRAVPLNRRVDELLIADRSALAGTCAPYGDLGDPGISPHWPPVKTTHQ
Ga0207665_1043389833300025939Corn, Switchgrass And Miscanthus RhizosphereLAPAQLVRLGQAYRLAWRRAVPTNGRVNELLQADRELLAGRCIPYGDLGDPAISPHWPPVKTTHQ
Ga0207661_1022933843300025944Corn RhizospherePDEVQPAAAAFAHLPGILVARAGRGYFVVRSRGRLQPRELIALGRRARLAWKRAVPLNRRVDELLQADRQLLADRPVCVPYGDLGDPDISPHWPPVKTTHQ
Ga0207667_1077604213300025949Corn RhizosphereLGRSLRLAWRRAVPLNRRVNELLQADRRLLRGTCVPYGELGDPDISPHWPPVLTRHQ
Ga0207658_1189981523300025986Switchgrass RhizosphereRGYFLVRSPRRLTPVGLIRLGQAYRLLWRRAVPSNRRVNELLIADRQLLRGRCVPYGDLGDPAISPHWPPVKTTHQ
Ga0207674_1150118513300026116Corn RhizospherePVGGHYFVVRSRRPLPPRALIRLGLRLRLAWRGAVPLNRRVDELLQADRQLLAGTCVPYGELGDPDISPHWPPATTRHQ
Ga0207698_1181417413300026142Corn RhizosphereLVREGVRLRLAWKRAVPFNRRVDELLIADRSALAGTCVPYGDLGDPGISPHWPPVKTTHQ
Ga0209577_1011546453300026552SoilVGGHYFVVRRGPAAPRALIRIGLRLRRAWKTAVPLNKRVDELILADRQLLGAATCAPYGDLGDPDISPHWPPVKTTHQ
Ga0209073_1042659123300027765Agricultural SoilGQRLRLAWRGAVPLNRRVNELLQADRQLLRRPPACTPYGELGDPGISPHWPPVKTSHQ
Ga0209060_1039344923300027826Surface SoilERLRLAWKRAVPSNGRVDELLLADRTALAGTCVPYGDLGDPGISPHWPPVKTTHQ
Ga0137415_1055070823300028536Vadose Zone SoilISLGQSLRRTWRSAVPQNLRVNELLQADRQLLQTPPACKPYGDLGDPGISPHWPPVATTH
Ga0265322_1003167613300028654RhizosphereGVPAIAGHYFVVRSRTPLAPRALIRRGLALREAWKRAVPFNKRVDELLQSDRQLLSGTCVPYGELGDPDISPHWPLVQTSHQ
Ga0265336_1026399313300028666RhizosphereIRRGLELREEWKRAVPSNKRVDELLVSDRQLLAGTCVPYGELGDPDISPHWPPVQTSHQ
Ga0307317_1004868233300028720SoilAIRLGQSLRIAWRRAAPLNKRVNELLQADRQLLRVPPVCRPYGELGDPGISPHWPPVKTTHQ
Ga0307317_1032288023300028720SoilYFLLRSPTRLAPEALIRLGRSYRLAWREAVPSNRRVNELLIADNELLKGVCVPYGDLNDPDISPHWPPVKTTHQ
Ga0307284_1011542313300028799SoilALIRLGRSYRLAWRDAVPSNRRVNELLIADNELLKGVCVPYGDLNDPDISPHWPPVKTTH
Ga0307277_1038648123300028881SoilYAAAATEESSARRAFAQVRGASSEEVAGGYFVVRSRGLLRPRALIALGRSLRLTWKAAVPLNHRVDELLQADRQLLRVPPVCVPYGDLGDPGISPHWPPVTTTHQ
Ga0307304_1033932823300028885SoilAYFLLRSPMRLAPEALIRLGRSYRLAWRDAVPSNRRVNELLIADRQLLRSRCTPYGDLGDPDISPHWPPVETTHQ
Ga0265324_1005177813300029957RhizosphereALIRRGLALREAWKRAVPFNKRVDELLQSDRQLLSGTCVPYGELGDPDISPHWPLVQTSH
Ga0302299_1067054813300030010FenHYFVVRSARPASPRALIREGLVLRERWQRAVPFNERVDELLRSDRELLAGTCVPYGELGDPDISPHWPPVATSHQ
Ga0307501_1006338413300031152SoilAVIVRPGPAYFLLRSPKRLAPAALIRLGRSYRLAWRGAVPSNRRVNELLIADRQLLRGRCIPYGDLGDPDISPHWPPVKTTHQ
Ga0265320_1054027123300031240RhizosphereAASRGEATAAQSALGVAAIAGHYFVVRSQTPLAPRALIRRGLELREEWKRAVPSNKRVDELLVSDRQLLAGTCVPYGELGDPDISPHWPPVQTSHQ
Ga0318516_1028562313300031543SoilIALGRTLRLRWKRAVPTNRRVDELLQADAQLLRSPVRCVPYGELGDPDISPHWPPVKTRH
Ga0318555_1011944813300031640SoilHYFVVRSRSALPPRELIALGQSLRRRWKHAVPANTRVDELLIADRQLLQRPPRCMPYGELGDPDISPHWPPVKTSHQ
Ga0265342_1022878613300031712RhizospherePAIAGHYFVVRSRTPLAPRALIRRGLALREAWKRAVPFNKRVDELLQSDRQLLSGTCVPYGELGDPDISPHWPLVQTSHQ
Ga0310813_1201392623300031716SoilPRALVREGVRLRVAWKQAVPFNRRVDELLVADRSALTGTCVRYGDLGDPGISPHWPPVKTTHQ
Ga0318546_1129362023300031771SoilVRTRAALPPRRLIALGRTLRLRWKRAVPTNRRVDELLQADAQLLRSPVRCVPYGELGDPDISPHWPPVKTRHQ
Ga0308174_1081969713300031939SoilRTALAPLALVREGLRLRLAWKRAVPFNRRVDELLIADRSALAGTCVPYGDLGDPGISPHWPPAKTTHQ
Ga0308174_1145485023300031939SoilEAAAAERQLGVEAVAGHYFVVRSRTKLTPRALVAQGLALRRRWKRAVPVNRRVDELIQSDRQLLSGTCVPYGELGDPDISPHWPPARTTHQ
Ga0308176_1196055313300031996SoilAAQKALGTSPIGGHYFAVRSAEPLAPRALVREGERLRLAWKQAVPLNIRVDELLIADRSALAGTCVPYGDLGDPGISPHWPPVKTTHQ
Ga0308176_1257882513300031996SoilRTPLAPLAAIKLGQALRLAWGGAAPLNRRVNELLQADRQLLRVPPACRPYGELGDPGISPHWPPVKTTHQ
Ga0306922_1075805613300032001SoilQGVTVQQVKRHYFVVRSRSALPPRELIALGQSLRRRWKHAVPANTRVDELLIADRQLLQRPPRCMPYGELGDPDISPHWPPVKTSHQ
Ga0318563_1035938113300032009SoilRWKRAVPTNRRVDELLQADAQLLRSPVRCVPYGELGDPDISPHWPPVKTRHQ
Ga0318569_1020024213300032010SoilLPPRELIALGQSLRRRWKHAVPANTRVDELLIADRQLLQRPPRCMPYGELGDPDISPHWPPVKTSHQ
Ga0318569_1048325023300032010SoilVKGHYFVVRSRQPLAPRALIALGGLLRERWQRAVPANTRVEELLTADRQLLRQPPRCTPYGVLGDPDIDPHWPPVKTTHQ
Ga0318559_1007087213300032039SoilSGEQGVTVQQVKRHYFVVRSRSALPPRELIALGQSLRRRWKHAVPANTRVDELLIADRQLQQRPPRCMPYGELGDPDISPHWPPVKTSHQ
Ga0318513_1010976923300032065SoilSALPPRELIALGQSLRRRWKHAVPANTRVDELLIADRQLLQRPPRCMPYGELGDPDISPHWPPVKTSHQ
Ga0308173_1057335213300032074SoilSRTALAPLALVREGLRLRLAWKRAVPFNRRVDELLIADRSALAGTCVPYGDLGDPGISPHWPPAKTTHQ
Ga0308173_1122048623300032074SoilEIAAASRALRLPPVGGHYFVVRRGPATPRALLRTGLRLRRTWKAAVPVNKRVDELILSDRRLLSGTCIPYGELGDPDISPHWPPAKTTHQ
Ga0335070_1045825213300032829SoilFDGERGVTVQRVKRHFFIVRSRDALQPRALVALGRSLRERWKRAVPANTRVDELLIADRQLLQTPPHCIPYGVLGDPDIDPHWPPVSTTHQ
Ga0335069_1030803713300032893SoilRALIGEGLRLRTAWKQAVPLNARVDELLASDRQLLAGRCVPYGILDDPDISPHWPPVKQR
Ga0335076_1110582623300032955SoilQKALGVAPVAGHYFVVRSPKPLPPRALIELGRTLRQRWKAAVPLNKRVDELLQSDRQLLAGTCVPYGDLGDPDIDPVWPPLPTTHQ
Ga0335084_1220890713300033004SoilSSRPAAPRALIREGLELRERWKRAVPFNQRVDELLRSDRQLLAGRCVPYGELGDPDISPHWPPVATTHQ
Ga0335077_1086588113300033158SoilPKPLPPRALIELGRDLRQRWKEAVPLNRRVDELLQSDRRLLAGTCVPYGELGDPDINPVWPPLPTRHQ
Ga0318519_1072556713300033290SoilDGETAVKVQQVKGHYFVVRSRQPLAPRALIALGGLLRERWQRAVPANTRVEELLTADRQLLRQPPRCTPYGVLGDPDIDPHWPPVKTTHQ
Ga0314862_0183499_333_5183300033803PeatlandIALGQSLRERWRSAVPANARVDELLIADRQLLQRPPRCVPYGELGDPDISPHWPPVKTSH
Ga0314864_0022574_1050_13013300033805PeatlandLEQVKRHYFVVRSRSALAPRELIALGQSLRERWKRAVPANARVDELLIADRQLLQQPPRCVPYGDLGDPDISPHWPPVKTSHQ
Ga0372943_0257770_1_2643300034268SoilAENELGVEPLDGHYFVVRSRAPELPRALIEDGFRLRERWKRAVPSNHRVDELLQSDRQLLAGTCLPYGELGDPDISPHWPPARTSHQ

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.