Metagenome / Metatranscriptome Family F040725

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040725
Family Type	Metagenome / Metatranscriptome
Number of Sequences	161
Average Sequence Length	66 residues
Representative Sequence	VRQYVWLARSRPIRLLLLAWFLSYAGDLAAFTAASVYVYRVGGAAYVGLLGLLKALPGALLVPLVAS
Number of Associated Samples	111
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.75 %
% of genes near scaffold ends (potentially truncated)	98.76 %
% of genes from short scaffolds (< 2000 bps)	93.17 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.795 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (48.447 % of family members)
Environment Ontology (ENVO)	Unclassified (61.491 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (49.689 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.32% β-sheet: 0.00% Coil/Unstructured: 33.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF03636	Glyco_hydro_65N	4.35
PF13545	HTH_Crp_2	3.11
PF00027	cNMP_binding	2.48
PF13401	AAA_22	1.86
PF12679	ABC2_membrane_2	1.86
PF00583	Acetyltransf_1	1.24
PF00196	GerE	0.62
PF05239	PRC	0.62
PF00775	Dioxygenase_C	0.62
PF09664	DUF2399	0.62
PF01636	APH	0.62
PF01966	HD	0.62
PF07992	Pyr_redox_2	0.62
PF00589	Phage_integrase	0.62
PF00005	ABC_tran	0.62
PF12706	Lactamase_B_2	0.62
PF03861	ANTAR	0.62
PF04679	DNA_ligase_A_C	0.62
PF13380	CoA_binding_2	0.62
PF05345	He_PIG	0.62
PF07883	Cupin_2	0.62
PF11706	zf-CGNR	0.62
PF13601	HTH_34	0.62
PF10009	DUF2252	0.62
PF03466	LysR_substrate	0.62
PF00300	His_Phos_1	0.62
PF00561	Abhydrolase_1	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG1554	Phosphatase/phosphodiesterase/kojibiose phosphorylase YcjT/PafA/Npp1, AlkP superfamily	Carbohydrate transport and metabolism [G]	4.35
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.62
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.62
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.80 %
Unclassified	root	N/A	47.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.80 %
Unclassified	root	N/A	47.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.80 %
Unclassified	root	N/A	47.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.20 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	44.10 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.20 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	39.13 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.20 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	24.84 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.86 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.20 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4.35 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	3.11 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2.48 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.86 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.24 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	1.24 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.62 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.20 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	4.35 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.86 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.24 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1.24 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %
Patulibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae	0.62 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.62 %
Promicromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.20 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	4.35 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.86 %
Knoellia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Knoellia	1.24 %
Patulibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter	0.62 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.62 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.62 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	0.62 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.62 %
Cellulosimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Cellulosimicrobium	0.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.20 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4.35 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.86 %
Knoellia subterranea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Knoellia → Knoellia subterranea	1.24 %
Micromonospora ureilytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	0.62 %
Nocardioides gansuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides gansuensis	0.62 %
Geodermatophilus obscurus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	0.62 %
Patulibacter minatonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter minatonensis	0.62 %
Cellulosimicrobium cellulans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Cellulosimicrobium → Cellulosimicrobium cellulans	0.62 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	0.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_113522543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora ureilytica	1036	Open in IMG/M
3300000956\|JGI10216J12902_114407531	Not Available	561	Open in IMG/M
3300004479\|Ga0062595_101186853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	676	Open in IMG/M
3300004635\|Ga0062388_102103024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586	Open in IMG/M
3300005332\|Ga0066388_102136484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1008	Open in IMG/M
3300005332\|Ga0066388_103411485	Not Available	812	Open in IMG/M
3300005332\|Ga0066388_106217094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	603	Open in IMG/M
3300005541\|Ga0070733_10106139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1796	Open in IMG/M
3300005764\|Ga0066903_108908352	Not Available	509	Open in IMG/M
3300006176\|Ga0070765_102209030	Not Available	513	Open in IMG/M
3300006796\|Ga0066665_11478223	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300006854\|Ga0075425_101527489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae → Cellulosimicrobium → Cellulosimicrobium cellulans	754	Open in IMG/M
3300006871\|Ga0075434_102413304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	528	Open in IMG/M
3300006903\|Ga0075426_10004132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10333	Open in IMG/M
3300006914\|Ga0075436_101039772	Not Available	615	Open in IMG/M
3300007076\|Ga0075435_100303216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter minatonensis	1366	Open in IMG/M
3300009792\|Ga0126374_11715815	Not Available	522	Open in IMG/M
3300010046\|Ga0126384_12096582	Not Available	542	Open in IMG/M
3300010048\|Ga0126373_11312106	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300010048\|Ga0126373_12779088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300010358\|Ga0126370_11782519	Not Available	595	Open in IMG/M
3300010358\|Ga0126370_11898396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	579	Open in IMG/M
3300010359\|Ga0126376_11667730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	672	Open in IMG/M
3300010359\|Ga0126376_11879956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	638	Open in IMG/M
3300010360\|Ga0126372_12855219	Not Available	535	Open in IMG/M
3300010361\|Ga0126378_10121395	All Organisms → cellular organisms → Bacteria	2618	Open in IMG/M
3300010361\|Ga0126378_11456466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	776	Open in IMG/M
3300010362\|Ga0126377_13275035	Not Available	523	Open in IMG/M
3300010376\|Ga0126381_104443830	Not Available	542	Open in IMG/M
3300010376\|Ga0126381_104787412	Not Available	520	Open in IMG/M
3300010398\|Ga0126383_11336010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	807	Open in IMG/M
3300012925\|Ga0137419_10262837	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300012971\|Ga0126369_10663999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1117	Open in IMG/M
3300014155\|Ga0181524_10249331	Not Available	835	Open in IMG/M
3300016341\|Ga0182035_11639427	Not Available	580	Open in IMG/M
3300016357\|Ga0182032_10830638	Not Available	782	Open in IMG/M
3300016357\|Ga0182032_11457580	Not Available	594	Open in IMG/M
3300016387\|Ga0182040_10814295	Not Available	770	Open in IMG/M
3300016404\|Ga0182037_10204578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1533	Open in IMG/M
3300016404\|Ga0182037_12038618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	515	Open in IMG/M
3300016422\|Ga0182039_10724625	Not Available	878	Open in IMG/M
3300016422\|Ga0182039_12164159	Not Available	513	Open in IMG/M
3300016445\|Ga0182038_10113731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1995	Open in IMG/M
3300017924\|Ga0187820_1132347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	739	Open in IMG/M
3300017937\|Ga0187809_10249027	Not Available	642	Open in IMG/M
3300017959\|Ga0187779_10718972	Not Available	676	Open in IMG/M
3300017959\|Ga0187779_10844272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	627	Open in IMG/M
3300017970\|Ga0187783_10543558	Not Available	841	Open in IMG/M
3300017972\|Ga0187781_10238662	Not Available	1286	Open in IMG/M
3300017973\|Ga0187780_10484706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	882	Open in IMG/M
3300018019\|Ga0187874_10261670	Not Available	708	Open in IMG/M
3300018020\|Ga0187861_10203011	Not Available	885	Open in IMG/M
3300018044\|Ga0187890_10882252	Not Available	504	Open in IMG/M
3300018085\|Ga0187772_10910596	All Organisms → cellular organisms → Bacteria → Terrabacteria group	639	Open in IMG/M
3300020580\|Ga0210403_11058251	Not Available	632	Open in IMG/M
3300021358\|Ga0213873_10249694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	562	Open in IMG/M
3300021478\|Ga0210402_11822969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	534	Open in IMG/M
3300021560\|Ga0126371_10281420	Not Available	1785	Open in IMG/M
3300021560\|Ga0126371_11398073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	831	Open in IMG/M
3300021560\|Ga0126371_11886272	Not Available	717	Open in IMG/M
3300021560\|Ga0126371_12645684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	608	Open in IMG/M
3300027765\|Ga0209073_10182492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	790	Open in IMG/M
3300027895\|Ga0209624_10195540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1342	Open in IMG/M
3300029636\|Ga0222749_10715355	Not Available	548	Open in IMG/M
3300029910\|Ga0311369_11431872	Not Available	521	Open in IMG/M
3300030580\|Ga0311355_11388547	Not Available	611	Open in IMG/M
3300031544\|Ga0318534_10059918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2143	Open in IMG/M
3300031544\|Ga0318534_10612920	Not Available	618	Open in IMG/M
3300031545\|Ga0318541_10120341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1425	Open in IMG/M
3300031545\|Ga0318541_10304189	Not Available	889	Open in IMG/M
3300031546\|Ga0318538_10170655	Not Available	1155	Open in IMG/M
3300031546\|Ga0318538_10567220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	616	Open in IMG/M
3300031546\|Ga0318538_10611506	Not Available	591	Open in IMG/M
3300031564\|Ga0318573_10088174	Not Available	1577	Open in IMG/M
3300031564\|Ga0318573_10305662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	851	Open in IMG/M
3300031564\|Ga0318573_10802289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Knoellia → Knoellia subterranea	506	Open in IMG/M
3300031572\|Ga0318515_10473321	All Organisms → cellular organisms → Bacteria → Terrabacteria group	669	Open in IMG/M
3300031679\|Ga0318561_10242644	Not Available	982	Open in IMG/M
3300031680\|Ga0318574_10938926	Not Available	507	Open in IMG/M
3300031681\|Ga0318572_10101408	Not Available	1625	Open in IMG/M
3300031681\|Ga0318572_10639954	Not Available	633	Open in IMG/M
3300031682\|Ga0318560_10374972	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300031713\|Ga0318496_10172967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides gansuensis	1183	Open in IMG/M
3300031719\|Ga0306917_10851825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Knoellia → Knoellia subterranea	714	Open in IMG/M
3300031719\|Ga0306917_11061503	Not Available	631	Open in IMG/M
3300031719\|Ga0306917_11097844	Not Available	620	Open in IMG/M
3300031723\|Ga0318493_10036622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2260	Open in IMG/M
3300031723\|Ga0318493_10507503	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300031724\|Ga0318500_10168140	Not Available	1039	Open in IMG/M
3300031747\|Ga0318502_10235423	Not Available	1066	Open in IMG/M
3300031748\|Ga0318492_10084378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1541	Open in IMG/M
3300031748\|Ga0318492_10095905	All Organisms → cellular organisms → Bacteria	1452	Open in IMG/M
3300031748\|Ga0318492_10399692	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300031751\|Ga0318494_10267807	Not Available	982	Open in IMG/M
3300031751\|Ga0318494_10743247	Not Available	574	Open in IMG/M
3300031751\|Ga0318494_10747635	Not Available	573	Open in IMG/M
3300031764\|Ga0318535_10149740	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300031764\|Ga0318535_10223923	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300031765\|Ga0318554_10247369	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300031768\|Ga0318509_10106302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1518	Open in IMG/M
3300031770\|Ga0318521_10404568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	814	Open in IMG/M
3300031770\|Ga0318521_10997677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300031771\|Ga0318546_10352219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1024	Open in IMG/M
3300031778\|Ga0318498_10397634	Not Available	613	Open in IMG/M
3300031779\|Ga0318566_10119762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1298	Open in IMG/M
3300031779\|Ga0318566_10229452	All Organisms → cellular organisms → Bacteria	921	Open in IMG/M
3300031782\|Ga0318552_10151703	Not Available	1164	Open in IMG/M
3300031782\|Ga0318552_10375112	Not Available	725	Open in IMG/M
3300031782\|Ga0318552_10742919	Not Available	501	Open in IMG/M
3300031797\|Ga0318550_10166592	Not Available	1062	Open in IMG/M
3300031799\|Ga0318565_10046794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1999	Open in IMG/M
3300031805\|Ga0318497_10371493	Not Available	799	Open in IMG/M
3300031819\|Ga0318568_10170345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1337	Open in IMG/M
3300031819\|Ga0318568_10185523	Not Available	1280	Open in IMG/M
3300031819\|Ga0318568_10793123	Not Available	587	Open in IMG/M
3300031821\|Ga0318567_10045002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2260	Open in IMG/M
3300031835\|Ga0318517_10045452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1823	Open in IMG/M
3300031846\|Ga0318512_10271618	Not Available	839	Open in IMG/M
3300031846\|Ga0318512_10455418	Not Available	646	Open in IMG/M
3300031860\|Ga0318495_10226009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	840	Open in IMG/M
3300031893\|Ga0318536_10272918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	859	Open in IMG/M
3300031897\|Ga0318520_10109764	Not Available	1559	Open in IMG/M
3300031910\|Ga0306923_12196018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300031910\|Ga0306923_12239440	Not Available	547	Open in IMG/M
3300031912\|Ga0306921_11861815	Not Available	645	Open in IMG/M
3300031912\|Ga0306921_12295841	Not Available	566	Open in IMG/M
3300031946\|Ga0310910_10102009	Not Available	2132	Open in IMG/M
3300031946\|Ga0310910_11258238	Not Available	573	Open in IMG/M
3300031954\|Ga0306926_10921212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1045	Open in IMG/M
3300031954\|Ga0306926_11597677	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300032001\|Ga0306922_10152772	All Organisms → cellular organisms → Bacteria	2469	Open in IMG/M
3300032001\|Ga0306922_11719111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	620	Open in IMG/M
3300032008\|Ga0318562_10553912	All Organisms → cellular organisms → Bacteria → Terrabacteria group	665	Open in IMG/M
3300032008\|Ga0318562_10764881	Not Available	554	Open in IMG/M
3300032010\|Ga0318569_10101544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1300	Open in IMG/M
3300032043\|Ga0318556_10017460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3149	Open in IMG/M
3300032043\|Ga0318556_10187532	Not Available	1074	Open in IMG/M
3300032043\|Ga0318556_10440971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	681	Open in IMG/M
3300032044\|Ga0318558_10077626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1522	Open in IMG/M
3300032054\|Ga0318570_10320104	Not Available	706	Open in IMG/M
3300032054\|Ga0318570_10444300	Not Available	592	Open in IMG/M
3300032055\|Ga0318575_10057316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1803	Open in IMG/M
3300032055\|Ga0318575_10073381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1618	Open in IMG/M
3300032059\|Ga0318533_11072949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	590	Open in IMG/M
3300032064\|Ga0318510_10059928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1370	Open in IMG/M
3300032066\|Ga0318514_10042450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2175	Open in IMG/M
3300032066\|Ga0318514_10704363	Not Available	537	Open in IMG/M
3300032068\|Ga0318553_10407483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	712	Open in IMG/M
3300032076\|Ga0306924_10228588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2136	Open in IMG/M
3300032076\|Ga0306924_12038029	Not Available	590	Open in IMG/M
3300032089\|Ga0318525_10608485	Not Available	557	Open in IMG/M
3300032090\|Ga0318518_10262076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	887	Open in IMG/M
3300032094\|Ga0318540_10648115	Not Available	509	Open in IMG/M
3300032180\|Ga0307471_102797368	Not Available	619	Open in IMG/M
3300032261\|Ga0306920_100812776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1371	Open in IMG/M
3300032805\|Ga0335078_10490471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1582	Open in IMG/M
3300032828\|Ga0335080_10551616	Not Available	1218	Open in IMG/M
3300032828\|Ga0335080_12092430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300033158\|Ga0335077_10924147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	877	Open in IMG/M
3300033289\|Ga0310914_10770343	Not Available	860	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.27%
Host-Associated	Host-Associated	3.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.93%
Aquatic	Environmental → Aquatic	4.35%
Plants	Host-Associated → Plants	3.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.68%
Freshwater	Environmental → Aquatic → Freshwater	4.35%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.73%
Peat	Environmental → Terrestrial → Peat	1.24%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.75%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.21%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.35%
Loam	Environmental → Terrestrial → Soil → Loam	3.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.24%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	63.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.66%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.86%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.24%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.24%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.24%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	48.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.11%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.24%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.24%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1135225431	3300000956	Soil	MWLARSKPLLLLLLAWGLSFAGDLAAFLAGSVYAYRAGGAGLVAVLGLLKALPGAFLVPL
JGI10216J12902_1144075313	3300000956	Soil	MWLARSKPILLLLLAWGLSCAGDLASFTAASVYAYRAGGAGLVAVLGLLKALPGAFLVPL
Ga0062595_1011868532	3300004479	Soil	VRQYAWSARGRPIRLLLIAWCLSYAGDLAAFTAASVYVYHAGGAAYVGLLGLLKALPGAVLVPLVASWSDRMRR
Ga0062388_1021030242	3300004635	Bog Forest Soil	LRQYAWLARSKSILLLLTAWGLSYAGDLAAFTAASVYAYRAGGAGLVALLGLLKALPGAFLVPLVTSGSD
Ga0066388_1021364841	3300005332	Tropical Forest Soil	VRQYVWLARSRPIRLLLLAWFLSYAGDLAAFTAASVYVYRVGGAAYVGLLGLLKALPGALLVPLVAS
Ga0066388_1034114852	3300005332	Tropical Forest Soil	MRQYVWLARSRPIRLLLLAWGISYAGDMAAFTVASVYLYGAGGAGYVGLLWLEYALFAVLLVPLIGSWADRVRRE
Ga0066388_1062170941	3300005332	Tropical Forest Soil	MWLARSRPILLLLTAWGLSYAGDLAAFTAASVYAFQAGGAGLVAVLGLLKALPGAFLVPV
Ga0070733_101061393	3300005541	Surface Soil	MRQYMWLARSRPIRLLLLAWGITYAGDLAAFTVASVYLFRVGGAGYVGLLGLEYALFAALLVP
Ga0066903_1089083521	3300005764	Tropical Forest Soil	MALSQYVWLARSRPIRLLLIACGLSYAGDLGAFTAASVYVFHAGGAAYVGLLGLLKAL
Ga0070765_1022090302	3300006176	Soil	MWLARSKPILLLLTAWCLSYAGDLAAFTAASVYAYRAGGAGLVAVLGLLKALPGAFLVP
Ga0066665_114782231	3300006796	Soil	VAGRGRPIRLLLIAWCLAYAGEAYVGLLGLLKALPGALLVPLVASWSDRMRRERL
Ga0075425_1015274891	3300006854	Populus Rhizosphere	MWLARSRPIRLLLLAWGISYAGDLAAFTVASVYLYGAGGAGYVGLLWLEYALFAAVLVPLISSWSDRVRRERLLTATHIPRA
Ga0075434_1024133041	3300006871	Populus Rhizosphere	MWLARSRPIRLLLLAWGISYAGDLAAFTVASVYLYGAGGAGYVGLLWLEYALFAAVLVPLISSWSDRVRRERLLTATHIPRAL
Ga0075426_100041321	3300006903	Populus Rhizosphere	MRQYVWPARGRPIRLLLIAWCLSYAGDLAAFTAASVYVYHAGGAAYVGLLGLLKALP
Ga0075436_1010397722	3300006914	Populus Rhizosphere	LRQYTWLARSKPILLLLTAWGLSYAGDLAAFTAASVYAYRAGGAGLVAVLGLLKALPGAFLVPLVTSG
Ga0075435_1003032164	3300007076	Populus Rhizosphere	MRQYVWLARSRPIRLLLLAWAVSYAGDMAAFTVASVYLYGAGGAGYVGLLWLEYALFAVLLVPLIGS
Ga0126374_117158151	3300009792	Tropical Forest Soil	MGLEALRVAGPRPPIRLLLIAWCLAYAGDLAAFTAASVYVYQAGGAAYVGLLGLLKALPGALLVPLVASWSDRVRRER
Ga0126384_120965822	3300010046	Tropical Forest Soil	MGFVSGRTHEREGLAVRQYVWLARSRPIRLLLLAWCLSYAGDLAAFTAASVYVYQAGGAAYVGLLGLLKALPGALLVPLVASWSDRMRRERLL
Ga0126373_113121062	3300010048	Tropical Forest Soil	MWLARSKPILLLLTAWCLSYAGDLAAFTAASVYAYRAGGVGLVAVLGLLK
Ga0126373_127790881	3300010048	Tropical Forest Soil	MWLARSKPILLLLTAWGMSYAGDLAAFTAGSVYAYRAGGAGLVAVLGLLKALPGSFLVPLVTSG
Ga0126370_117825191	3300010358	Tropical Forest Soil	MWLARSKPILLLLTAWGLSYAGDLAAFTAASVYAYRAGGTGLVAVLGLLKALPGAFLVPVVTSGSDRVRRERLLIATVVSRVLLLG
Ga0126370_118983962	3300010358	Tropical Forest Soil	VWSARGRPIRLLLLAWGLSYAGDLAAFTSASVYVYHVGGAAYVGLLGLLKALPGALLVPLVASWSDRMRRERLLAVSVALRALLLA
Ga0126376_116677301	3300010359	Tropical Forest Soil	LRQYAWSARDRPIRLLLIAWCLAYAGDLAAFTAASVYVYQAGGAAYVGLLGLLKALPGALLVPLVASWSDRMRRERLLMVSVAVRALL
Ga0126376_118799562	3300010359	Tropical Forest Soil	MWLAHSKPILLLLMAWGLSYAGDLAAFTAASVYAFDAGGAGLVAVLGLLK
Ga0126372_128552192	3300010360	Tropical Forest Soil	VWPARGRPIRLLLIAWCLAYAGDLAAFTAASVYVYQAGGAAYVGLLGLLKALPGALLVPLVASWSDRMRRER
Ga0126378_101213951	3300010361	Tropical Forest Soil	MWLARSKPILLLLTAWCLSYAGDLAAFTAASVYAYRAGGVGLVAVLGLLKALPGALLVPVVTSGSDRVRRERLLIATVVPRVLLLGL
Ga0126378_114564661	3300010361	Tropical Forest Soil	LAEHEREGLVLRQYVWLARSRPIRLLLIAWCLSYAGDLAAFTAASVYVYHVGGAAYVGLLGLLKALPGALLVPLVASWSDRVRRERL
Ga0126377_132750351	3300010362	Tropical Forest Soil	MWLAHSKPILLLLMAWGLSYAGDLAAFTAASVYAFSAGGAGLVAVLGLLKALPGAFLVP
Ga0126381_1044438302	3300010376	Tropical Forest Soil	LAVRQYVWLARSRPIRLLLLAWFLSYAGDLAAFTAASVYVYRVGGAAYVGLLGLLKALPDALL
Ga0126381_1047874121	3300010376	Tropical Forest Soil	MWLARNKPILLLLMAWGLSYAGDLAAFTAASVYAFSAGGAGLVAVLGLLKALPGAFL
Ga0126383_113360102	3300010398	Tropical Forest Soil	MWLARSKPILLLLTAWGLSYAGDLAAFTAASVYAYRAGGAGLVAVLGLLKALPGAFL
Ga0137419_102628371	3300012925	Vadose Zone Soil	LRQYTWLARSKPILLLLIAWGLSYAGDLAAFTAASVYAYRAGGAGLVAVLGLLKALPGAFLVPLVTSG
Ga0126369_106639993	3300012971	Tropical Forest Soil	VWLARSRPIRLLLVAWCLSYAGDLAAFTAASVYVYRVGGVAYVGLLGLLKALPGALLVPLVASWSDRVRR
Ga0181524_102493311	3300014155	Bog	VAWGLSYAGDLAAFTAASVYAYRTGGAGLVGILGLAKALPGAFLVPLVTSGSDRVRRERLLIATVVPRA
Ga0182036_117864951	3300016270	Soil	MRQYMWLARSRPILLLLLAWGISYAGDMAAYTVASVYLYHAGGAGYVGLLGVEWALSAAILVPLVSSWSDRVRRERLLTATLIPRALLL
Ga0182035_116394271	3300016341	Soil	LRQYAWLARSRPILLLLVAWGLSYAGDLAAFTAASVYAYRAGGTGLVGILGLAKALPGAFLVP
Ga0182032_108306381	3300016357	Soil	VRQYVWLARSRPIRRLLLAWFLSYAGDLAAFTAASVYVYTVGGAAYVGLLGLLKALPGALLVPLV
Ga0182032_114575802	3300016357	Soil	VWLARSRPIRLLLIAWCLSYAGDLAAFTAASVYVYHVGGAAYVGLLGLLKALPGALLVPLVASWSDRVRR
Ga0182040_108142952	3300016387	Soil	VRQYVWLARSRPIRRLLLAWFLSYAGDLAAFTAASVYVYTVGGAAYVGLLGLLKALPGALLVPLVGSWSD
Ga0182037_102045781	3300016404	Soil	VRQYTWLAHSRPLRHLLLACLVCYAGDLAAFTAASVYAYHAGGAGLVAVLGLLKALPGAILVPLLT
Ga0182037_120386182	3300016404	Soil	LRQYLWLARSKPILLLLTAWCLSYAGDLAAFTAASVYAFRAGGAGLVAVLGLLKALPGAFLVPVVTSGSD
Ga0182039_107246252	3300016422	Soil	VRQYVWLARSRPIRRLLLAWFLSYAGDLAAFTAASVYVYTVGGAAYVGLLGLLKALPGALLVPLVG
Ga0182039_121641591	3300016422	Soil	VRHYLWLAHNGPIRLLLVAWGVSYAGDLAAFTAASVYAYHAGGAGLVGLLGL
Ga0182038_101137314	3300016445	Soil	VRQYVWLARSRPIRLLLLAWFLAYAGDLAAFTAASVYVYAVGGAAYVGLLGLLKALPGALLVPLVGSW
Ga0187820_11323471	3300017924	Freshwater Sediment	MWLARNRPIRLLLMAWGACYASDLAAFTAASVYAYRTGGAGLVGIFGLAKGLSGALL
Ga0187809_102490271	3300017937	Freshwater Sediment	MAVRQYVWLARSRSIRRLLLACGVCYAGDLAAFTAASVYAYHAGGTGLVAVLGLLKALPGSL
Ga0187779_107189722	3300017959	Tropical Peatland	MRQYIWLAHSRPMRHLLVACGVCYAGDLAAFTAASVYAYRAGGAGLVAVLGLLKALPGALLVPAVTSGSDR
Ga0187779_108442722	3300017959	Tropical Peatland	VRQYLWLARSGPIRLLLMAWGVCYAGDLAAFTAASVYAYRTGGAGLVGILGLARGLSGALLVPLVTSWSDRVRQERLLVASVVPRALLLGAA
Ga0187783_105435581	3300017970	Tropical Peatland	MRQYMWLARSRPIRLLLLAWGVTYAGDLAAFTVASVYLYRAGGAGYVGLLWLEYALFAALLVPLISSWSDRVRRERLLIATLVPRALLL
Ga0187781_102386621	3300017972	Tropical Peatland	VRPYLWLARSRPIGLLLMAWGLSYAGDLAAFTAASVYAYRTGGAGLVGILGLIR
Ga0187780_104847062	3300017973	Tropical Peatland	MWLARNRPIRLLLMAWGACYASDLAAFTAASVYAYRTGGAGLVGIFGLARGLSGALLVPLVTSWSDRVRRE
Ga0187874_102616701	3300018019	Peatland	LRHFTWRSRSKPILLLLVAWGLSYAGDLAAFTAASVYAYRTGGAGLVGILGLAKALPGAFLVPLVTSGSDRVRRERLLIATVV
Ga0187861_102030111	3300018020	Peatland	LRHFTWRSRSKPILLLLVAWGLSYAGDLAAFTAASVYAYRTGGAGLVGILGLAKALPGAFLVPLVTSGSDR
Ga0187890_108822521	3300018044	Peatland	MWLARSKPILLLLAAWGLSYAGDLAAFTAASVYAYRAGGAGLVAVLGLLKALP
Ga0187772_109105962	3300018085	Tropical Peatland	LRQYAWLARSKPILLLLVAWGLSYGGDLAAFTAGSVYAYHAGGAGLVALLGLLKALLGALLVPLVTSGSDRVR
Ga0210403_110582511	3300020580	Soil	LRQYTWLARSKPILLLLTAWGLSYAGDLAAFTAASVYAYRAGGAGLVAVLGLLKALPGAFLVPLVTSGSDRTRR
Ga0213873_102496941	3300021358	Rhizosphere	VRQYTWLLRSKPILLLLTAWGLSYAGDLAAFTAASVYAYRAGGAGLVAVLGLLKALPGAFLVPLV
Ga0210402_118229691	3300021478	Soil	MWLARSKPILLLLTAWGMSYAGDLAAFTAASVYAYRAGGAGLVAVLGLLKALPGAFLVPL
Ga0126371_102814201	3300021560	Tropical Forest Soil	MWVARSKPILLLLTAWGLSYAGDLAAFTAASVYAYRSGGVGLVAVLGLLKALPGALLVPVVTSGSDRVRGE
Ga0126371_113980731	3300021560	Tropical Forest Soil	MWLARSKPILLLLTAWGLSYAGDLAAFTAASVYAFRAGGAGLVAVLGLLKALPGAFL
Ga0126371_118862722	3300021560	Tropical Forest Soil	MTGFVSDRTHEREGLTVRQYVWLARSRPIRLLLVAWCLSYAGDLAAFTAASVYVYRVGGVAYVGLLGLLKALPGALLVPLVASWSDRVR
Ga0126371_126456842	3300021560	Tropical Forest Soil	MWLARSKPILLLLTAWGLSYAGDLAAFTAASVYAYRAGGAGLVAVLGLLKALPGAF
Ga0209073_101824921	3300027765	Agricultural Soil	VRRYGWPARGRPIRLLLIAWCLSYAGDLAAFTAASVYVYYAGGAAYVGLLGLLKALPGALLVPLVASWSDRMRRERLLMISVAVRA
Ga0209624_101955403	3300027895	Forest Soil	MRQYIWLARSRPIRLLLLAWGITYAGDLAAFTVASVYLYRVGGAGYVGLLGLEYALFAALLVPLISSWSD
Ga0222749_107153551	3300029636	Soil	LRQYTWLVRSKPILLLLTAWGLSYAGDLAAFTAASVYAYRAGGAGLVAVLGLLKALPGAFLVPLVTSGSD
Ga0311369_114318721	3300029910	Palsa	LVLRRNTWLASSKSILLLLSAGGLSYAGDLAAFTAASVYAYHAGGAGLVALLGLLKALPGVFLVPLISSQ
Ga0311355_113885471	3300030580	Palsa	LRRNTWLASSKSILLLLSAGGLSYAGDLAAFTAASVYAYHAGGAGLVALLGLLK
Ga0318534_100599183	3300031544	Soil	VRQYVWLARSRPIRRLLLAWFLSYAGDLAAFTAASVYVYTVGGAAYVGLLGLLKALPGALLVP
Ga0318534_106129202	3300031544	Soil	VRRYVWPARGRPIRLLLLAWCLSYAGDLAAFTAASVYVYHVGGAAYVGLLGLLKALPGAVLVPLVASWSDRVRRERL
Ga0318541_101203411	3300031545	Soil	VRQYTWLAHSRPLRHLLLACLVCYAGDLAAFTAASVYAYHAGGAGLVAVLGLLKALPGAILVPLLTSWADR
Ga0318541_103041891	3300031545	Soil	MRQYMWLARSRPILLLLLAWGISYAGDMAAYTVASVYLYHAGGAGYVGLLGVEWALSAAVLVPLVSSWSDRVLRERLLT
Ga0318538_101706551	3300031546	Soil	VRHYLWLAHNGPIRLLLVAWGVSYAGDLAAFTAASVYAYHAGGAGLVGLLGLAKALPGAFLVPLVTSWSDRV
Ga0318538_105672202	3300031546	Soil	MWLARSKPILLLLTAWGLSYAGDLAAFTAASVYAYRAGGAGLVAVLG
Ga0318538_106115061	3300031546	Soil	MWLARSKPILLLLTAWGLSYAGDLAAFTAASVYAYRAGGTGLVAVLGLLKALPGAFLVPVVTSGSDRVRRERLLIATVVP
Ga0318573_100881741	3300031564	Soil	VRHYIWLARNRPIRLLLAAWGVSYAGDLAAFTAASVYAYHAGGAGLVGLLGLAKALPGAL
Ga0318573_103056622	3300031564	Soil	MWLARSKPILLLLTAWGLSYAGDLAAFTAASVYAYRAGGTGLVAVLGLLKALPGAFLVPVVTSGSDRVRRERLLIATVVPRVLLLGVA
Ga0318573_108022891	3300031564	Soil	VRQYVWLARSRPIRLLLLAWTLSNAGDLAAFTAASVYVYHAGGAAYVGLLGLLKALPGALLVPLVASWSDRVRRERLLMA
Ga0318515_104733212	3300031572	Soil	MWLARSKPILLLLTAWGMSYAGDLAAFTAGSVYAYRAGGAGLVAVLGLLKALA
Ga0318561_102426442	3300031679	Soil	VRHYIWLARNRPIRLLLAAWGVSYAGDLAAFTAASVYAYHAGGAGLVGLLGLAKALPGALLVPLVTS
Ga0318574_109389262	3300031680	Soil	VRQYVWLARSRPIRLLLLAWFLSYAGDLAAFTAASVYVYAAGGAAYVGLLGLLKALPGALLV
Ga0318572_101014082	3300031681	Soil	VRHYLWLAHNGPIRLLLVAWGVSYAGDLAAFTAASVYAYHAGGAGLVGLLGLAKALPG
Ga0318572_106399541	3300031681	Soil	MWLARSKPILLLLTAWGLSYAGDLAAFTAASVYAYRAGGTGLVAVLGLLKALPGAFLVPVVTSGSDRVRRERLLIATVVPRVLLLG
Ga0318560_103749722	3300031682	Soil	VRQYTWLAHSRPLRHLLVACLVCYAGDLAAFTAASVYAFHAGGAGLVAVLGLLKALPGAILVPLLTSWADRVR
Ga0318496_101729672	3300031713	Soil	MWLARSKPILLLLTAWGLSYAGDLAAFTAASVYAYRAGGTGLVAVLGLLKALPGAFLVPVVTSGSDR
Ga0306917_108518251	3300031719	Soil	VRQYVWLARSRPIRLLLLAWFLSYAGDLAAFTAASVYVYAAGGAAYVGLLGLLKALPGALLVPLVGSWSDRVRRER
Ga0306917_110615031	3300031719	Soil	VRQYVWLARSRPIRRLLLAWFLSYAGDLAAFTAASVYVYTVGGAAYVGLLGLLKALPGALLVPL
Ga0306917_110978441	3300031719	Soil	MWLAHSKPILLLLMAWGLSYAGDLAAFTAASVYAFDAGGAGLVAVLGLLKA
Ga0318493_100366224	3300031723	Soil	VRQYVWLARSRPIRLLLLAWFLAYAGDLAAFTAASVYVYAVGGAAYVGLLGLLKALPGALLVPLVGSWSDRVR
Ga0318493_105075032	3300031723	Soil	LRQYLWLARSKPILLLLTAWCLSYAGDLAAFTAASVYAFRAGGAGLVAVLGLLK
Ga0318500_101681401	3300031724	Soil	VRHYLWLAHNGPIRLLLVAWGVSYAGDLAAFTAASVYAYHAGGAGLVGLLGLAKALPGAFLVP
Ga0318502_102354232	3300031747	Soil	VRQYTWLAHSRPLRHLLVACLVCYAGDLAAFTAASVYAFHAGGAGLVAVLGLLKALPGAILVPLLTSWADRV
Ga0318492_100843781	3300031748	Soil	VWLARSRPIRLLLIAWCLSYAGDLAAFTAASVYVYRVGGVAYVGLLGLLKALPGALLVPLVAS
Ga0318492_100959052	3300031748	Soil	MWLARSKPILLLLTAWGLSYAGDLAAFTAASVYAYRAGGTGLVAVLGLLKALPGAFLVPVVTSGSDRVRRERLLIATVVPR
Ga0318492_103996921	3300031748	Soil	MWLARSKPILLLLTAWGLSYAGDLAAFTAASVYAYRAGGAGLVAVLGLLKALPGAFLVPVVTSG
Ga0318494_102678072	3300031751	Soil	VRQYVWLARSRPIRLLLLAWTLSNAGDLAAFTAASVYVYHAGGAAYVGLLGLLKALPGALLVPLVASWSDR
Ga0318494_107432471	3300031751	Soil	VRQYTWLAHSRPLRHLLVACLVCYAGDLAAFTAASVYAFHAGGAGLVAVLVLLKALL
Ga0318494_107476351	3300031751	Soil	VRQYVWLARSRPIRLLLTAWFLSYAGDLAAFTAASVYVYRVGGAAYVGLLGLLKALPGALLVPLVAS
Ga0318535_101497401	3300031764	Soil	MWLARSKPILLLLTAWGMSYAGDLAAFTAGSVYAYRAGGAGLVAVLGLLKALPGAFLVPLVTSGSDRVRRE
Ga0318535_102239232	3300031764	Soil	VRQYTWLAHSRPLRHLLVACLVCYAGDLAAFTAASVYAFHAGGAGLVAVLGLLKA
Ga0318554_102473692	3300031765	Soil	VRQYTWLAHSRPLRHLLVACLVCYAGDLAAFTAASVYAFHAGGAGLVAVLGLLKALPGAILVPL
Ga0318509_101063023	3300031768	Soil	LRQYLWLARSKPILLLLTAWCLSYAGDLAAFTAASVYAFRAGGAGLVAV
Ga0318521_104045681	3300031770	Soil	MWLARSKPILLLLTAWGLSYAGDLAAFTAASVYAYRAGGAGLVAVLGLLKALP
Ga0318521_109976771	3300031770	Soil	VLEHEGLALRQYTWLARSKPMLLLLMAWGLSYAGDLAAFTAASVYAYRAGGAGLVAILGLLKALPGAFIVPLVTSGSDRVR
Ga0318546_103522192	3300031771	Soil	LRQYLWLARSKPILLLLIAWGLSYAGDLAAFTAASVYAYRAGGAGLVAVLGLL
Ga0318498_103976341	3300031778	Soil	MRQYMWLARSRPILLLLLAWGISYAGDMAAYTVASVYLYHAGGAGYVGLLGVEWALSAAILVPLVSSWSDRVRRERLL
Ga0318566_101197622	3300031779	Soil	VRQYVWLARSRPIRLLLLAWFLSYAGDLAAFTAASVYVYAAGGAAYVGLLGLLKALPGALLVPLVGSWSDRVRRERLLMVSVALRALP
Ga0318566_102294521	3300031779	Soil	VRQYTWLAHSRPLRHLLVACLVCYAGDLAAFTAASVYAFHAGGAGLVAVLGLLKAL
Ga0318552_101517031	3300031782	Soil	VRQYTWLAHSRPLRHLLVACLVCYAGDLAAFTAASVYAFHAGGAGLVAVLGLLKALPGAILVPLLTSWAD
Ga0318552_103751121	3300031782	Soil	VRQYVWLARSRPIRLLLLAWFLSYAGDLAAFTAASVYVYAAGGAAYVGLLGLLKALPGALLVPLVGSWSDRVR
Ga0318552_107429191	3300031782	Soil	VRQYVWLARSRPIRLLLIAWFLSYAGDLAAFTAASVYVYRVGGAAYVGLLGLLKAL
Ga0318550_101665921	3300031797	Soil	VRHYIWLARNRPIRLLLAAWGVSYAGDLAAFTAASVYAYHAGGAGLVGLL
Ga0318565_100467941	3300031799	Soil	VRQYVWLARSRPIRRLLLAWFLSYAGDLAAFTAASVYVYTVGGAAYVGLLGLLKAL
Ga0318497_103714931	3300031805	Soil	MRQYGWLARSRPILLLLLAWGISYAGDMAAYTVASVYLYHAGGAGYVGLLGVEWALSAAILVPLVSSWS
Ga0318568_101703452	3300031819	Soil	VRQYVWPARGRPIRLLLLAWCLSYAGDLAAFTAASVYVYHVGGAAYVGLLGLLKALPGAVLVPLVASWSDRVRRERLLAVSVAL
Ga0318568_101855232	3300031819	Soil	VRHYIWLARNRPIRLLLAAWGVSYAGDLAAFTAASVYAYHAGGAGLVGLLGLAK
Ga0318568_107931232	3300031819	Soil	VRQYVWLARSRPIRLLLLAWFLSYAGDLAAFTAASVYVYAAGGAAYVGLLGLLKALPGALLVPLVGSWSDRVRRERLLM
Ga0318567_100450023	3300031821	Soil	VRQYVWLARSRPIRRLLLAWFLSYAGDLAAFTAASVYVYTVGGAAYVGLLGLLKALPGA
Ga0318517_100454521	3300031835	Soil	VRQYTWLAHSRPLRHLLVACLVCYAGDLAAFTAASVYAFHAGGAGLVAVLGLLKARPGARVTCVDLPGTGVHY
Ga0318512_102716181	3300031846	Soil	VRQYVWLARSRPIRRLLLAWFLSYAGDLAAFTAASVYVYTVGGAAYVGLLGLLKALPTSGTSSAPGSA
Ga0318512_104554181	3300031846	Soil	VRQYVWLARSRPIRLLLLAWCLSYAGDLAAFTAASVYVYHVGGAAYVGLLGLLKALPG
Ga0318495_102260092	3300031860	Soil	VWLARSRPIRLLLIAWCLSYAGDLAAFTAASVYVYRVGGVAYVGLLGLLKALPGALLVPLVASWSDRVR
Ga0318536_102729181	3300031893	Soil	MWLARSRPILLLLLAWGISYAGDMAAYTVASVYLYHAGGAGYVGLLGVEWALSAAVLVPLVSSWSDRVLRERLLTAT
Ga0318520_101097641	3300031897	Soil	VRHYLWLAHNGPIRLLLVAWGVSYAGDLAAFTAASVYAYHAGGAGLVGLLGLAKALPGAFLVPLVTSWSDRVRRAA
Ga0306923_121960182	3300031910	Soil	VRQYVWLARSRPIRLLLLAWFLSYAGDLAAFTAASVYVYAAGGAAYVGLLGLLKALPGALLVPLVGSWSDRVRRERLLMVS
Ga0306923_122394402	3300031910	Soil	VRQYVWLARSRPIRLLLIAWGLSYAGDLAAFTAASVYVYRVGGVAYVGLLGLLKALPGALLVPLV
Ga0306921_118618151	3300031912	Soil	VTGFVCDRTHEREGFAVRQYVWLARSRPIRLLLVAWGLSYAGDLAAFTAASVYVYRVGGVAYVGLLGLLKALPGALLVPLVASWSDR
Ga0306921_122958412	3300031912	Soil	MRQYMWLARSRPILLLLLAWGISYAGDMAAYTVASVYLYHAGGAGYVGLLGVEWALSAAILVPLVS
Ga0310910_101020093	3300031946	Soil	VRHYIWLARNRPIRLLLAAWGVSYAGDLAAFTAASVYAYHAGGAGLVGLLGLAKAL
Ga0310910_112582381	3300031946	Soil	MWLARSKPILLLLTAWGMSYAGDLAAFTAASVYAYRAGGAGLVAVLGL
Ga0306926_109212121	3300031954	Soil	VWLARSRPIRRLLLAWFLAYAGDLAAFTAASVYVYRVGGAAYVGLLGLLKALPGALLVPLVASWSDRV
Ga0306926_115976772	3300031954	Soil	VRQYTWLAHSRPLRHLLVACLVCYAGDLAAFTAASVYAFHAGGAGLVAVLGLLK
Ga0306922_101527721	3300032001	Soil	MWLARSKPILLLLTAWGLSYAGDLAAFTAASVYAYRAGGTGLVAVLGLLKALPGAFL
Ga0306922_117191111	3300032001	Soil	LRQYLWLARSKPILLLLTAWGLSYAGDLAAFTAASVYAYRAGGAGLVAVLGLLKALPGAFLVP
Ga0318562_105539121	3300032008	Soil	MRQYMWLARSRPILLLLLAWGISYAGDMAAYTVASVYLYHAGGAGYVGVLGVEWALSAAILVPLVSSWSDRVRRE
Ga0318562_107648811	3300032008	Soil	VRHYIWLARNRPIRLLLAAWGVSYAGDLAAFTAASVYAYHAGGAGLVGLLGLAKALP
Ga0318569_101015442	3300032010	Soil	VWLARSRPIRLLLIAWCLSYAGDLAAFTAASVYVYRVGGVAYVGLLGLLKALPG
Ga0318556_100174601	3300032043	Soil	VRQYVWLARSRPIRLLLLAWFLAYAGDLAAFTAASVYVYAVGGAAYVGLLGLLKALPGALLVPLVGSWSDRV
Ga0318556_101875321	3300032043	Soil	VRHYLWLAHNGPIRLLLVAWGVSYAGDLAAFTAASVYAYHAGGAGLVGLLALAHAPYWPYLM
Ga0318556_104409711	3300032043	Soil	MWLARSKPILLLLTAWGMSYAGDLAAFTAGSVYAYRAGGAGLVAVLG
Ga0318558_100776263	3300032044	Soil	VWLARSRPIRLLLIAWCLSYAGDLAAFTAASVYVYTVGGAAYVGLLGLLKALPGALLVPLVGSWSDRVRRERLLMA
Ga0318570_103201041	3300032054	Soil	LRQYVWLARGRPIRLLLLAWGLSYAGDLAAFTAASVYVYHAGGAAYVGLLGLL
Ga0318570_104443001	3300032054	Soil	MWLARSKPILLLLTAWGMSYAGDLAAFTAASVYAYHAGGAGLVGLLGLAKALPGALLVPLVTS
Ga0318575_100573161	3300032055	Soil	VRQYTWLAHSRPLRHLLVACLVCYAGDLAAFTAASVYAFHAGGAGLVAVLGLLKALPGAILVPLLT
Ga0318575_100733813	3300032055	Soil	VWLARSRPIRLLLIAWCLSYAGDLAAFTAASVYVYRVGGVAYVGLLGLLKALPGALLV
Ga0318533_110729492	3300032059	Soil	LRQYLWLARSKPILLLLTAWCLSYAGDLAAFTAASVYAFRAGGAGLVAVLGLLKALP
Ga0318510_100599281	3300032064	Soil	VRQYVWPARGRPIRLLLLAWCLSYAGDLAAFTAASVYVYHVGGAAYVGLLGLLKALPGAVLVPLVASWS
Ga0318514_100424501	3300032066	Soil	VRQYVWLARSRPIRRLLLAWFLSYAGDLAAFTAASVYVYTVGGAAYVGLLGLLKALPGALLVPLVGSWSDRVRR
Ga0318514_107043631	3300032066	Soil	VRHYIWLARNRPFRLLLVAWGVSYAGDLAAFTAASVYAYHAGGAGLVGLLGLAKALPG
Ga0318553_104074832	3300032068	Soil	VRQYTWLAHSRPLRHLLLACLVCYAGDLAAFTAASVYAYHAGGAGLVAVLGLLKALPGAI
Ga0306924_102285883	3300032076	Soil	VRQYVWLARSRPIRRLLLAWFLSYAGDLAAFTAASVYVYTVGGAAYVGLLGLLKAQPGALLVPLVGSW
Ga0306924_120380291	3300032076	Soil	VRQYTWLAHSRPLRHLLVACLVCYAGDLAAFTAASVYAFHAGGAGLVAVLGL
Ga0318525_106084851	3300032089	Soil	VRQYVWLARSRPIRLLLLAWFLSYAGDLAAFTAASVYVYAAGGAAYVGLLGLLKALPGALLVPLVGSWSDRV
Ga0318518_102620761	3300032090	Soil	MWLARSKPILLLLTAWGLSYAGDLAAFTAASVYAYRAGGAGLVAVLGLLKALPGAFLVPVVTSGSDRV
Ga0318540_106481151	3300032094	Soil	VRHYIWLARNRPIRLLLAAWGVSYAGDLAAFTAASVYAYHAGGAGLVGLLGL
Ga0307471_1027973681	3300032180	Hardwood Forest Soil	LRQYTWLVRSKPILLLLTAWGLSYAGDLAAFTAASVYAYRAGGAGLVAVLGLLKALPGAFLVPLVTSGS
Ga0306920_1008127762	3300032261	Soil	VRQYVWLARSRPIRRLLLAWFLSYAGDLAAFTAASVYVYTVGGAAYVGLLGLLKALPGALLVPLVGSWSDRV
Ga0335078_104904711	3300032805	Soil	MMQYIWLARRRHMRHLLVAWCVCYAGDLAAFTAASVYAYRVGGAGLVAVLGLLKALPGAILVPLLAS
Ga0335080_105516161	3300032828	Soil	LRQYRWLARSKPILLLLTAWGMSYAGDLAAFTAASVYAYRAGGAGLVAVLGLLKALPGAFLV
Ga0335080_120924301	3300032828	Soil	MWLARSKPILLLLTAWGMSYAGDLAAFTAGSVYAYRAGGAGLVAVLGLLKALPGAFLVPL
Ga0335077_109241471	3300033158	Soil	MWLARSRPVLLLLVAWGLCYAGDLAAFTAASVYAYRAGGAGLVGILGLAK
Ga0310914_107703431	3300033289	Soil	MRQYRWLARSRPILLLLLAWGISYAGDMAAYTVASVYLYHAGGAGYVGLLGVEWALSAAILVPLVSSWS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040725

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences