Metagenome / Metatranscriptome Family F040657

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040657
Family Type	Metagenome / Metatranscriptome
Number of Sequences	161
Average Sequence Length	46 residues
Representative Sequence	MPAETLEFLLLLSGWIVAFLLGRELQTGFRQWRLRTAEQRARRQD
Number of Associated Samples	112
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.40 %
% of genes near scaffold ends (potentially truncated)	20.50 %
% of genes from short scaffolds (< 2000 bps)	89.44 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.596 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.770 % of family members)
Environment Ontology (ENVO)	Unclassified (26.087 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.553 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.53% β-sheet: 0.00% Coil/Unstructured: 42.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF00171	Aldedh	13.66
PF01344	Kelch_1	10.56
PF00459	Inositol_P	3.73
PF04978	DUF664	2.48
PF13964	Kelch_6	1.86
PF01261	AP_endonuc_2	1.24
PF11645	PDDEXK_5	1.24
PF02012	BNR	0.62
PF03880	DbpA	0.62
PF14697	Fer4_21	0.62
PF13188	PAS_8	0.62
PF13474	SnoaL_3	0.62
PF01301	Glyco_hydro_35	0.62
PF06283	ThuA	0.62
PF07646	Kelch_2	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	13.66
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	13.66
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	13.66
COG0513	Superfamily II DNA and RNA helicase	Replication, recombination and repair [L]	1.86
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	0.62
COG3055	N-acetylneuraminic acid mutarotase	Cell wall/membrane/envelope biogenesis [M]	0.62
COG4813	Trehalose utilization protein	Carbohydrate transport and metabolism [G]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.84 %
Unclassified	root	N/A	34.16 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.22 %
Unclassified	root	N/A	34.16 %
Viruses	superkingdom	All Organisms → Viruses	0.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.60 %
Unclassified	root	N/A	34.16 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.62 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.62 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	54.66 %
Unclassified	root	N/A	34.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.86 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.24 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.62 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.62 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.62 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	52.80 %
Unclassified	root	N/A	34.16 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.24 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.24 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.62 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.62 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.62 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.62 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	51.55 %
Unclassified	root	N/A	34.16 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1.24 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	1.24 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.62 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.62 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.62 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.62 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.62 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.62 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	51.55 %
Unclassified	root	N/A	34.16 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	1.24 %
Aggregatilineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Aggregatilineales	1.24 %
unclassified Caudoviricetes	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes	0.62 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.62 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.62 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	0.62 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.62 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.62 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	51.55 %
Unclassified	root	N/A	34.16 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.24 %
Aggregatilineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Aggregatilineales → Aggregatilineaceae	1.24 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.62 %
Podoviridae sp. ctQNx1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Podoviridae sp. ctQNx1	0.62 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.62 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	0.62 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.62 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.62 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	51.55 %
Unclassified	root	N/A	34.16 %
Aggregatilinea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Aggregatilineales → Aggregatilineaceae → Aggregatilinea	1.24 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.24 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.62 %
Podoviridae sp. ctQNx1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Podoviridae sp. ctQNx1	0.62 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.62 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	0.62 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.62 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.62 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	51.55 %
Unclassified	root	N/A	34.16 %
Aggregatilinea lenta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Aggregatilineales → Aggregatilineaceae → Aggregatilinea → Aggregatilinea lenta	1.24 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1.24 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.62 %
Podoviridae sp. ctQNx1	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Podoviridae sp. ctQNx1	0.62 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.62 %
Cyanophyceae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	0.62 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.62 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_114129073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	543	Open in IMG/M
3300004081\|Ga0063454_100803801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	727	Open in IMG/M
3300004157\|Ga0062590_102576055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	540	Open in IMG/M
3300004463\|Ga0063356_102789473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	752	Open in IMG/M
3300004463\|Ga0063356_103989450	Not Available	635	Open in IMG/M
3300004479\|Ga0062595_102531810	Not Available	512	Open in IMG/M
3300004633\|Ga0066395_10364293	Not Available	806	Open in IMG/M
3300004633\|Ga0066395_10674446	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
3300005167\|Ga0066672_10840136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	574	Open in IMG/M
3300005174\|Ga0066680_10850927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Cyanophyceae	545	Open in IMG/M
3300005176\|Ga0066679_10511579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	783	Open in IMG/M
3300005177\|Ga0066690_10210869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1295	Open in IMG/M
3300005177\|Ga0066690_10366374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	977	Open in IMG/M
3300005179\|Ga0066684_10302975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1062	Open in IMG/M
3300005179\|Ga0066684_10580748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	752	Open in IMG/M
3300005180\|Ga0066685_10792893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	642	Open in IMG/M
3300005353\|Ga0070669_101174474	Not Available	662	Open in IMG/M
3300005435\|Ga0070714_101601617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	636	Open in IMG/M
3300005437\|Ga0070710_10692853	Not Available	718	Open in IMG/M
3300005445\|Ga0070708_100226111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1755	Open in IMG/M
3300005447\|Ga0066689_10023250	All Organisms → cellular organisms → Bacteria	3065	Open in IMG/M
3300005454\|Ga0066687_10309101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	898	Open in IMG/M
3300005467\|Ga0070706_100211319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1812	Open in IMG/M
3300005467\|Ga0070706_102131751	Not Available	506	Open in IMG/M
3300005471\|Ga0070698_100093755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2982	Open in IMG/M
3300005518\|Ga0070699_100724774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	909	Open in IMG/M
3300005533\|Ga0070734_10447636	Not Available	736	Open in IMG/M
3300005534\|Ga0070735_10114128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1692	Open in IMG/M
3300005537\|Ga0070730_10045170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3218	Open in IMG/M
3300005537\|Ga0070730_10047201	All Organisms → cellular organisms → Bacteria	3133	Open in IMG/M
3300005537\|Ga0070730_10345278	Not Available	969	Open in IMG/M
3300005542\|Ga0070732_10021063	All Organisms → cellular organisms → Bacteria	3671	Open in IMG/M
3300005554\|Ga0066661_10286366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1016	Open in IMG/M
3300005559\|Ga0066700_11116149	Not Available	515	Open in IMG/M
3300005561\|Ga0066699_10944315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	600	Open in IMG/M
3300005575\|Ga0066702_10263479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Aggregatilineales → Aggregatilineaceae → Aggregatilinea → Aggregatilinea lenta	1051	Open in IMG/M
3300005598\|Ga0066706_10047906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2868	Open in IMG/M
3300005614\|Ga0068856_101104980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	810	Open in IMG/M
3300005764\|Ga0066903_100020392	All Organisms → cellular organisms → Bacteria	7031	Open in IMG/M
3300005764\|Ga0066903_100511196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2040	Open in IMG/M
3300005764\|Ga0066903_101864544	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300005764\|Ga0066903_102794751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	947	Open in IMG/M
3300005764\|Ga0066903_107945734	Not Available	544	Open in IMG/M
3300006032\|Ga0066696_10491697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	805	Open in IMG/M
3300006358\|Ga0068871_100882001	Not Available	828	Open in IMG/M
3300006796\|Ga0066665_10512042	Not Available	981	Open in IMG/M
3300006800\|Ga0066660_10647042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	878	Open in IMG/M
3300006800\|Ga0066660_11201423	Not Available	595	Open in IMG/M
3300006854\|Ga0075425_101134516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	890	Open in IMG/M
3300006914\|Ga0075436_100608950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	805	Open in IMG/M
3300009012\|Ga0066710_100943335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1330	Open in IMG/M
3300009012\|Ga0066710_101242323	Not Available	1155	Open in IMG/M
3300009012\|Ga0066710_101598186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	999	Open in IMG/M
3300009012\|Ga0066710_102084184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	835	Open in IMG/M
3300009088\|Ga0099830_10821150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	767	Open in IMG/M
3300009089\|Ga0099828_11480332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	599	Open in IMG/M
3300009090\|Ga0099827_10763428	Not Available	836	Open in IMG/M
3300009090\|Ga0099827_11874117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	523	Open in IMG/M
3300009094\|Ga0111539_13442553	Not Available	508	Open in IMG/M
3300009098\|Ga0105245_11931552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	643	Open in IMG/M
3300009098\|Ga0105245_13288957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	500	Open in IMG/M
3300009100\|Ga0075418_11635408	Not Available	700	Open in IMG/M
3300009101\|Ga0105247_11542367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	543	Open in IMG/M
3300009137\|Ga0066709_101155282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Aggregatilineales → Aggregatilineaceae → Aggregatilinea → Aggregatilinea lenta	1139	Open in IMG/M
3300009137\|Ga0066709_101266009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1083	Open in IMG/M
3300009137\|Ga0066709_101409730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1012	Open in IMG/M
3300009137\|Ga0066709_101674936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	904	Open in IMG/M
3300009137\|Ga0066709_102191277	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	762	Open in IMG/M
3300009137\|Ga0066709_103031836	Not Available	616	Open in IMG/M
3300009137\|Ga0066709_103085096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	610	Open in IMG/M
3300009147\|Ga0114129_10328630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2031	Open in IMG/M
3300009147\|Ga0114129_12131355	Not Available	676	Open in IMG/M
3300009177\|Ga0105248_10570299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1277	Open in IMG/M
3300010036\|Ga0126305_10656369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	708	Open in IMG/M
3300010037\|Ga0126304_10582902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	753	Open in IMG/M
3300010038\|Ga0126315_10274729	Not Available	1034	Open in IMG/M
3300010046\|Ga0126384_12194334	Not Available	531	Open in IMG/M
3300010152\|Ga0126318_10920438	Not Available	605	Open in IMG/M
3300010152\|Ga0126318_10987100	Not Available	709	Open in IMG/M
3300010154\|Ga0127503_11316978	Not Available	561	Open in IMG/M
3300010166\|Ga0126306_11677873	Not Available	530	Open in IMG/M
3300010336\|Ga0134071_10782506	All Organisms → cellular organisms → Bacteria → PVC group	509	Open in IMG/M
3300010358\|Ga0126370_12213434	Not Available	542	Open in IMG/M
3300010359\|Ga0126376_12514667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	563	Open in IMG/M
3300010359\|Ga0126376_12645736	Not Available	550	Open in IMG/M
3300010361\|Ga0126378_11185504	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	862	Open in IMG/M
3300010362\|Ga0126377_10288380	Not Available	1613	Open in IMG/M
3300010366\|Ga0126379_11295567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	835	Open in IMG/M
3300010371\|Ga0134125_12895179	Not Available	521	Open in IMG/M
3300010376\|Ga0126381_104273928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	553	Open in IMG/M
3300010398\|Ga0126383_12382231	Not Available	614	Open in IMG/M
3300011269\|Ga0137392_11179289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	624	Open in IMG/M
3300011270\|Ga0137391_10109499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2395	Open in IMG/M
3300012019\|Ga0120139_1204731	Not Available	524	Open in IMG/M
3300012096\|Ga0137389_10361724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1236	Open in IMG/M
3300012096\|Ga0137389_11508900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	568	Open in IMG/M
3300012199\|Ga0137383_10426330	Not Available	972	Open in IMG/M
3300012199\|Ga0137383_11207527	Not Available	543	Open in IMG/M
3300012204\|Ga0137374_10043372	All Organisms → cellular organisms → Bacteria → Proteobacteria	4731	Open in IMG/M
3300012204\|Ga0137374_10172797	All Organisms → cellular organisms → Bacteria	1897	Open in IMG/M
3300012207\|Ga0137381_11118051	Not Available	678	Open in IMG/M
3300012208\|Ga0137376_10892017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	764	Open in IMG/M
3300012209\|Ga0137379_10175921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2052	Open in IMG/M
3300012209\|Ga0137379_10440213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1212	Open in IMG/M
3300012209\|Ga0137379_11596208	Not Available	551	Open in IMG/M
3300012211\|Ga0137377_11390971	Not Available	630	Open in IMG/M
3300012212\|Ga0150985_111534693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1150	Open in IMG/M
3300012212\|Ga0150985_111667792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	543	Open in IMG/M
3300012212\|Ga0150985_119163915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	512	Open in IMG/M
3300012212\|Ga0150985_120357861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	849	Open in IMG/M
3300012212\|Ga0150985_122603359	Not Available	653	Open in IMG/M
3300012350\|Ga0137372_11082612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	552	Open in IMG/M
3300012358\|Ga0137368_10265059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1180	Open in IMG/M
3300012359\|Ga0137385_11567565	Not Available	523	Open in IMG/M
3300012363\|Ga0137390_10622818	Not Available	1045	Open in IMG/M
3300012469\|Ga0150984_109946580	Not Available	564	Open in IMG/M
3300012469\|Ga0150984_112038810	Not Available	1864	Open in IMG/M
3300012469\|Ga0150984_122834215	All Organisms → cellular organisms → Bacteria	2643	Open in IMG/M
3300012927\|Ga0137416_11587888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	595	Open in IMG/M
3300012927\|Ga0137416_11622778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	589	Open in IMG/M
3300012944\|Ga0137410_11438691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	600	Open in IMG/M
3300012971\|Ga0126369_11321738	Not Available	811	Open in IMG/M
3300012971\|Ga0126369_13065717	Not Available	547	Open in IMG/M
3300013297\|Ga0157378_11706726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	677	Open in IMG/M
3300013308\|Ga0157375_11385341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	828	Open in IMG/M
3300013768\|Ga0120155_1083195	Not Available	907	Open in IMG/M
3300013770\|Ga0120123_1091068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	688	Open in IMG/M
3300013831\|Ga0120126_1032623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	578	Open in IMG/M
3300014325\|Ga0163163_11247254	Not Available	806	Open in IMG/M
3300015371\|Ga0132258_10439878	All Organisms → cellular organisms → Bacteria	3248	Open in IMG/M
3300015373\|Ga0132257_103200186	Not Available	596	Open in IMG/M
3300018468\|Ga0066662_10057609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2520	Open in IMG/M
3300018468\|Ga0066662_10345000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1277	Open in IMG/M
3300018468\|Ga0066662_12267180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	570	Open in IMG/M
3300018482\|Ga0066669_11786352	Not Available	568	Open in IMG/M
3300021358\|Ga0213873_10086671	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300021362\|Ga0213882_10052007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1620	Open in IMG/M
3300021362\|Ga0213882_10201030	Not Available	822	Open in IMG/M
3300021384\|Ga0213876_10198656	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Podoviridae sp. ctQNx1	1066	Open in IMG/M
3300021384\|Ga0213876_10335271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	804	Open in IMG/M
3300021384\|Ga0213876_10635094	Not Available	568	Open in IMG/M
3300021560\|Ga0126371_11254905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	876	Open in IMG/M
3300025910\|Ga0207684_10450710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1105	Open in IMG/M
3300025910\|Ga0207684_11324228	Not Available	592	Open in IMG/M
3300025910\|Ga0207684_11586049	Not Available	530	Open in IMG/M
3300025922\|Ga0207646_10579147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1008	Open in IMG/M
3300025922\|Ga0207646_11469574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	591	Open in IMG/M
3300025928\|Ga0207700_11428112	Not Available	615	Open in IMG/M
3300025941\|Ga0207711_10398907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1278	Open in IMG/M
3300026078\|Ga0207702_10735068	Not Available	974	Open in IMG/M
3300026548\|Ga0209161_10210536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1062	Open in IMG/M
3300027748\|Ga0209689_1046008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2477	Open in IMG/M
3300027857\|Ga0209166_10036719	All Organisms → cellular organisms → Bacteria	2941	Open in IMG/M
3300027857\|Ga0209166_10372788	Not Available	744	Open in IMG/M
3300027857\|Ga0209166_10611306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	553	Open in IMG/M
3300027882\|Ga0209590_10208956	All Organisms → cellular organisms → Archaea → Euryarchaeota	1236	Open in IMG/M
3300027986\|Ga0209168_10162798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1127	Open in IMG/M
3300028536\|Ga0137415_10209031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1769	Open in IMG/M
3300031962\|Ga0307479_11204554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	721	Open in IMG/M
3300032261\|Ga0306920_102822442	Not Available	661	Open in IMG/M
3300034384\|Ga0372946_0080242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1509	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.88%
Host-Associated	Host-Associated	21.12%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.02%
Plants	Host-Associated → Plants	21.12%
Aquatic	Environmental → Aquatic	1.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.83%
Roots	Host-Associated → Plants → Roots	3.11%
Freshwater	Environmental → Aquatic → Freshwater	1.86%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.24%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.73%
Loam	Environmental → Terrestrial → Soil → Loam	13.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.48%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.86%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.86%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.24%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.24%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.16%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.35%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.48%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.86%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.24%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.24%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.24%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.62%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.66%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.35%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.73%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	3.11%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.48%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.48%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.86%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	1.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.86%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.24%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.24%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.24%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.24%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.24%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300013831	Permafrost microbial communities from Nunavut, Canada - A21_5cm_6M	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1141290732	3300000956	Soil	MPVETLEFMLLLSGWVVAFLLGRELQTGFRQWRLRTAEQRARNED*
Ga0063454_1008038014	3300004081	Soil	PEKLPPMPVETLEFLLLLSGWVVAFLLGRELQTGFRQWRLHSATQRAASREDQRS*
Ga0062590_1025760553	3300004157	Soil	MPLETLEFVLLLSGWVVAFLLGRELQNGFRQWRLRTVEQRARNDD*
Ga0063356_1027894731	3300004463	Arabidopsis Thaliana Rhizosphere	MELSMPVETVQFALLLGGWIVAFLLGKELQTGFRLWRAKTAEQRARDE*
Ga0063356_1039894502	3300004463	Arabidopsis Thaliana Rhizosphere	MPVETLEFILLLSGWVVAFLLGRELQVGFRQWRVRVAEQRTRRE*
Ga0062595_1025318102	3300004479	Soil	MPLETLEFVLLLSGWVVAFLLGRELQNGFRQWRLRTVEQRAR
Ga0066395_103642932	3300004633	Tropical Forest Soil	MSVETLEFFLLLIGWVVAFLLGRELQSGYRQWRLKAAEQRAT
Ga0066395_106744462	3300004633	Tropical Forest Soil	MSVETVEFVLLLSGWVVAFLLGRELQTGFRQWRLRAAEQRTRRQD*
Ga0066672_108401362	3300005167	Soil	MPLMSPETLEFLLLLSGWIVAFLLGRELQIGFRQWRLRTADQRTRRPD*
Ga0066680_108509271	3300005174	Soil	MSPETLEFLLLLSGWIVAFLLGRELQIGFRQWRLRTAEQRTRRPD*
Ga0066679_105115792	3300005176	Soil	MSVETLEFLLLLSGWIVAFLLGRELQTGFRQWRMRTSDQRARRHD*
Ga0066690_102108693	3300005177	Soil	MSSETLEFILLLSGWIVTFLLGRELLTGIRQVRLRLAEQRARRED*
Ga0066690_103663742	3300005177	Soil	MSPETLEFLLLLSGWIVAFLLGRELQIGFRQWRLRTADQRTRRPD*
Ga0066684_103029752	3300005179	Soil	MSVETLEFLLLLSGWIVAFLLGRELQTGFRQWRMRTSDERARRQD*
Ga0066684_105807482	3300005179	Soil	MPAETLEFLLLLSGWIVAFLLGRELQAGFRQWRLRAAEQRTRRPD*
Ga0066685_107928933	3300005180	Soil	LEFLLLLSGWVVAFLLGRELQIGFHQWRVRTAEQRPPRKDR*
Ga0070669_1011744742	3300005353	Switchgrass Rhizosphere	MPVETLEFVLLLSGWVVAFLLGRELQIGFRQWRLRTAEQRARNDD*
Ga0070714_1016016171	3300005435	Agricultural Soil	MSVETLEFLLLLGGWIVAFLLGRELQTGYRQWRLRVAEERTRRDA*
Ga0070710_106928532	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSFETVEFLLLLSGWVVAFLLGRELQTGFRQWRLRAAEQRAETRRD*
Ga0070708_1002261112	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPAETLEFLLLLSGWVVAFLLGRELQTGFRLWRLRTAEQRARSRQD*
Ga0066689_100232508	3300005447	Soil	MPLMSPETLEFLLLLSSWIVAFLLGRELQIGFRQWRLRTAEQRTRRPD*
Ga0066687_103091014	3300005454	Soil	LEKPLMSPETLEFLLLLSGWIVTFLLGRELLTGIRQVRMRLAEQRARRED*
Ga0070706_1002113192	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSVETLEFLLLLSGWIVAFLLGRELQTGYRQWRLKVAEQRAPRDD*
Ga0070706_1021317512	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPVETLEFLLLLSGWVVAFLLGRELQIGFREWRLRAAEQRTRRQD*
Ga0070698_1000937556	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPAETLEFLLLLSGWIVAFLLGRELQTGFRQWRLRTAEQRTRRQD*
Ga0070699_1007247742	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPAETLEFLLLLSGWVVAFLLGRELQTGFRQWRLKTAEQRARSRRD*
Ga0070734_104476361	3300005533	Surface Soil	MSFETLEFMLLLSGWVIVFLLGRELQTGFRQWRLKTAEQRAVTRRD*
Ga0070735_101141282	3300005534	Surface Soil	MSVETLEFLLLLSGWIVAFLLGRELQTGYRLWRLRGAEQRTQRNDVRR*
Ga0070730_100451702	3300005537	Surface Soil	MPAETLEFLLLLSGWIVAFLLGRELQTGFRQWRLKTAEQRTRRQD*
Ga0070730_100472011	3300005537	Surface Soil	MSVETLEFLLLLGGWIVAFLLGRELQTGYRLWRLRVAEERIRRDS*
Ga0070730_103452783	3300005537	Surface Soil	MPTETLEFLLLLGGWVVAFLLGRELQTGFRLWRVRTAEQRRKDR*
Ga0070732_100210632	3300005542	Surface Soil	MSVETLEFLLLLSGWIVAFLLGRELQTGYRLWRLRGAEQRSPRRDT*
Ga0066661_102863661	3300005554	Soil	PETLEFLLLLSGWIVAFLLGRELQIGFRQWRLRTAEQRTRRPD*
Ga0066700_111161492	3300005559	Soil	MPTETLEFVLLLTGWVVAFLLGRELQTGFRQWRMKTAEQRARRDN*
Ga0066699_109443151	3300005561	Soil	MSLETLEFLLLLSGWIVAFLLGRELQTGFRQWRLRTV
Ga0066702_102634792	3300005575	Soil	MSPETLEFLLLLSGWIVTFLLGRELLTGIGQVRLRLAEQRARRED*
Ga0066706_100479067	3300005598	Soil	MPLMSPETLEFLLLLSGWIVAFLLGRELQIGFRQWRLRTAEQRTRRPD*
Ga0068856_1011049804	3300005614	Corn Rhizosphere	MPTETLQFLLLLGGWVVAFLLGRELQTGFRLWRLRTAEQRRKDR*
Ga0066903_1000203924	3300005764	Tropical Forest Soil	MSPETLEFLLLLSGWIVVFLLGRELQTGIRQWRLRLAEQRARRQD*
Ga0066903_1005111962	3300005764	Tropical Forest Soil	MSVETLEFLLLLSGWVVAFLLGRELQTGYRLWRLKTAEQRARRDS*
Ga0066903_1018645442	3300005764	Tropical Forest Soil	MSVETLEFFLLLIGWVVAFLLGRELQSGYRQWRLKAAEQRATTRRD*
Ga0066903_1027947512	3300005764	Tropical Forest Soil	MSVETLEFLLLLSGWIVAFLLGRELQAGYRLWRVRIDEQRPPRRDR*
Ga0066903_1079457342	3300005764	Tropical Forest Soil	MPVETIEFLLLLSGWVVAFLLGKELQTGFRIWRTRAAEERSTDRDQAPKI*
Ga0066696_104916973	3300006032	Soil	MSPETLEFLLLLSGWIVTFLLSRELLTGIRQVRMRLAEQRARRED*
Ga0068871_1008820012	3300006358	Miscanthus Rhizosphere	MPVETLEFVLLLSGWVIAFLLGRELQTAFRQWRLRTAEQRARTDD*
Ga0066665_105120424	3300006796	Soil	DDLEMPLMSPETLEFLLLLSGWIVAFLLGRELQIGFRQWRLRTAEQRTRRPD*
Ga0066660_106470423	3300006800	Soil	MSLETLEFLLLLSGWIVAFLLGRELQTGFRQWRLRTVEQRPRRED*
Ga0066660_112014231	3300006800	Soil	LLSGWIVAFLLGRELQTGFRQWRLRAAEQRTRRPD*
Ga0075425_1011345161	3300006854	Populus Rhizosphere	MSPETLEFLLLLSGWIVAFMLGRELQIGFRQWRLRAAEQRTRRQD*
Ga0075436_1006089504	3300006914	Populus Rhizosphere	RCRLMSVETLEFLLLLSGWIVAFLLGRELQTGYRQWRMKTAEQRADQRPHRQD*
Ga0066710_1009433352	3300009012	Grasslands Soil	MPAETLEFLLLLSGWVVAFLLGRELQTGFRQWRLRTAEQRARSRQD
Ga0066710_1012423232	3300009012	Grasslands Soil	MEVPLVSVETLEFLLLLSGWIVAFLLGRELQTGYRQWRIKVAEQQTDQRPNRRD
Ga0066710_1015981862	3300009012	Grasslands Soil	MPAETLEFLLLLSGWIVAFLLGRELQAGFRQWRLRAAEQRTRRPD
Ga0066710_1020841842	3300009012	Grasslands Soil	MSPETLEFLLLLSGWIVAFLLGRELQIGFRQWRLRTA
Ga0099830_108211502	3300009088	Vadose Zone Soil	MPAETLEFLLLLSGWIVAFLLGRELQTGFRQWRLRTAEQRARRQD*
Ga0099828_114803322	3300009089	Vadose Zone Soil	MPAETLEFLLLLSGWIVAFLLGRELQTGFRQWRLRTAEQRSRRQD*
Ga0099827_107634282	3300009090	Vadose Zone Soil	MPAETLEFLLLLSGWVVAFLLGRELQTGFRQWRLRLAEQRARSRQD*
Ga0099827_118741172	3300009090	Vadose Zone Soil	MPAETLEFLLLLSGWIVAFLLGRELQTGFRLWRLRTAEQRARSRQD*
Ga0111539_134425531	3300009094	Populus Rhizosphere	MPVETLEFVLLLSGWVVAFLLGRELQSGFRQWRLRTAEQRARIDD*
Ga0105245_119315522	3300009098	Miscanthus Rhizosphere	MPVETLEFLLLLSGWIVAFLLGRELQTGFRLWRLRTAEQRVRRED*
Ga0105245_132889573	3300009098	Miscanthus Rhizosphere	MPIELLEFVLLLTGWVVAFLLGRELQTGFREWRLRTAEQNQPNKER*
Ga0075418_116354082	3300009100	Populus Rhizosphere	MMPVETLEFVLLLSGWVVAFLLGRELQSGFRQWRLRTAEQRARIDD*
Ga0105247_115423671	3300009101	Switchgrass Rhizosphere	MPTETLEFLLLLGGWVVAFLLGRELQTGFRQWRLRTADQRRKDR*
Ga0066709_1011552821	3300009137	Grasslands Soil	MQVETLEFLLLLSGWVVAFWLGRELQIGFRQWRLRGGEQRTRGPD*
Ga0066709_1012660091	3300009137	Grasslands Soil	MPVETLEFLLLLSGWIVAFLLGRELQTGFRLWRLRTAEQRSRRQD*
Ga0066709_1014097301	3300009137	Grasslands Soil	LMSPETLEFLLLLSGWIVAFLLGRELQIGFRQWRLRTAEQRTRRPD*
Ga0066709_1016749362	3300009137	Grasslands Soil	MPAETLEFLLLLSGWVVAFLLGRELQTGFRQWRLRTAEQRARSRQD*
Ga0066709_1021912772	3300009137	Grasslands Soil	MSPETLEFVLLLSGWVVAFLLGRELQTGFRQWRLRTAEQRARRQD*
Ga0066709_1030318361	3300009137	Grasslands Soil	MSPETLEFLLLLSGWIVTFLLSRELLTGIRQVRMRLAEQ
Ga0066709_1030850964	3300009137	Grasslands Soil	MPAETLEFLLLFSGWIVAFLLGRELQAGFRQWRLRAAEQRTRRPD*
Ga0114129_103286306	3300009147	Populus Rhizosphere	MMPVETLEFVLLLSGWVVAFLLGRELQTGFRQWRMRTAEQRARTED*
Ga0114129_121313552	3300009147	Populus Rhizosphere	MSVETLEFVLLLSGWVVAFLLGRELQTGFRQWRLRTAEQRTRRPE*
Ga0105248_105702992	3300009177	Switchgrass Rhizosphere	MSTMPVETLEFVLLLSGWVIAFLLGRELQTAFRQWRLRTAEQRARTDD*
Ga0126305_106563692	3300010036	Serpentine Soil	MPPETLEFVLLLSGWIVAFLLGRELQVGFRRWRMRAAEQRTRRDD*
Ga0126304_105829021	3300010037	Serpentine Soil	MPPETLEFVLLLSGWIVAFLLGRELQVGFRKWRMRAAEQRARRERRLRLG*
Ga0126315_102747291	3300010038	Serpentine Soil	MSVETVEFVLLLSGWVVAFLLGRELQTGFRQWRLRAAEQRSRRPD*
Ga0126384_121943343	3300010046	Tropical Forest Soil	MPVETLEFLLLLSGWVVAFLLGRELQSGFRQWRLRVVDQRARRED*
Ga0126318_109204382	3300010152	Soil	MPVETIEFLLLLSGWIVAFLLGKELQTGFRVWRTRAAEQRADRER*
Ga0126318_109871003	3300010152	Soil	MSVETLEFLLLLSGWIVAFLLGRELQTGYRLWRLRGAEQRASSRRDG*
Ga0127503_113169781	3300010154	Soil	LEFLLLLSGWVVAFLLGRELQSGFRQWRLHVATQRAARREDQGS*
Ga0126306_116778732	3300010166	Serpentine Soil	MPLETLEFILLLSGWIVAFLLGRELQMGFRQWRLARAEQRTRRND*
Ga0134071_107825061	3300010336	Grasslands Soil	MSVETLEFLLLLSGWIVAFLLGRELQTGYRLWRVRTAEQQTDQRPNRRD*
Ga0126370_122134342	3300010358	Tropical Forest Soil	MPVETLEFLLLLSGWVVAFLLGRELQTGFRQWRLRTVEQRVRREE*
Ga0126376_125146671	3300010359	Tropical Forest Soil	MPVETLEFLLLLSGWVVAFLLGRELQTGFRQWRMRTADQRARRED*
Ga0126376_126457361	3300010359	Tropical Forest Soil	MSVETLEFFLLLVGWVIAFLLGRELQSGYRQWRLKVAEQRVTTRRDR*
Ga0126378_111855042	3300010361	Tropical Forest Soil	MHMSVETVEFVLLLGGWVVAFLLGRELQTGFRQWRMRTAEQRTRRQD*
Ga0126377_102883801	3300010362	Tropical Forest Soil	MSVETLEFFLLLIGWVVAFLLGRELQSGYRQWRLKAAEQRATTR
Ga0126379_112955672	3300010366	Tropical Forest Soil	MSVETFEFVLLLSGWIVIFLLGRELRTGYVQWRIYQADQRARRDD*
Ga0134125_128951791	3300010371	Terrestrial Soil	MPVETLEFVLLLTGWVVAFLLGRELQTGFRQWRLRTAEQRARIDD*
Ga0126381_1042739283	3300010376	Tropical Forest Soil	MSVETLEFFLLLGGWVVAFLLGRELQSGYRRWRLKAAEQRAITRRDR*
Ga0126383_123822312	3300010398	Tropical Forest Soil	MTVETLEFLLLLSGWIVAFLLGSELQTGYRQWRLKTA
Ga0137392_111792891	3300011269	Vadose Zone Soil	MPAETLEFLLLLSGWVVAFLLGRELQTGYRLWRLRTAEQRARSRQD*
Ga0137391_101094992	3300011270	Vadose Zone Soil	MPAETLEFLLLLSGWVVAFLLGRELQTGFRLWRLKTAEQRARSRQD*
Ga0120139_12047313	3300012019	Permafrost	LEFLLLLGGWVVAFLLGRELQTGFREWRLRTAEQRRKDR*
Ga0137389_103617242	3300012096	Vadose Zone Soil	MPAETLEFLLLLSGWIVAFLLGRELQTGFRQWRLRTAEQRTRRPD*
Ga0137389_115089001	3300012096	Vadose Zone Soil	ETRRLPLMPAATLEFLLLLSGWIVAFLLGRELQTGFRLWRLRTAEQRARSRQD*
Ga0137383_104263302	3300012199	Vadose Zone Soil	MPVETLEFLLLLSGWVVAFLLGRELQTGFHQWRVRTAEQRPPRKDR*
Ga0137383_112075272	3300012199	Vadose Zone Soil	MPAETLEFLLLLSGWVVAFLLGRELQTGFRLWRLKTAEQRARSRPD*
Ga0137374_100433722	3300012204	Vadose Zone Soil	MSESVLMSPETLEFVLLLSGWVVAFLLGRELQTGFRQWRLRTAEQRARRQD*
Ga0137374_101727973	3300012204	Vadose Zone Soil	MMPVETLEFVLLLSGWVVAFLLGRELQTGFRQWRMRTAEQRARTDD*
Ga0137381_111180514	3300012207	Vadose Zone Soil	LMPVETLEFLLLLSGWVVAFLLGRELQIGFREWRLRAAEQRTRRPD*
Ga0137376_108920172	3300012208	Vadose Zone Soil	MPAETLEFLLLLSGWVVAFLLGRELQTGFRLWRLRTAEQRARSRTD*
Ga0137379_101759212	3300012209	Vadose Zone Soil	MSVETLEFLLLLSGWIVAFLLGRELQTGYRQWRLRTAEQRARQED*
Ga0137379_104402132	3300012209	Vadose Zone Soil	MPVETLEFLLLLSGWVVAFLLGRELQIGFRQWRLRAAEQRTRRPD*
Ga0137379_115962081	3300012209	Vadose Zone Soil	MPIETLEFLLLLSGWVVAFLLGRELQIGFREWRLRAAEQ
Ga0137377_113909711	3300012211	Vadose Zone Soil	MPVETLEFVLLLSGWVVAFLLGRELQIGFREWRLRAAEQRTRRQD*
Ga0150985_1115346931	3300012212	Avena Fatua Rhizosphere	MPVETLEFLLLLSGWVVAFLLGRELQTGFRQWRLHSATQRAASREDQRS*
Ga0150985_1116677923	3300012212	Avena Fatua Rhizosphere	METLEFVLLLGGWVVAFLMGRELQTGFRQWRLRTVEQRINRHD*
Ga0150985_1191639153	3300012212	Avena Fatua Rhizosphere	MSVETLEFLLLLSGWIVAFLLGRELQSGYRLWRLKTAEERPRRDS*
Ga0150985_1203578612	3300012212	Avena Fatua Rhizosphere	MPVETLEFLLLLSGWVVAFLLGRELQTGYRQWRQIRAAATQRAPQRED*
Ga0150985_1226033592	3300012212	Avena Fatua Rhizosphere	MSVETLEFVLLLGGWVVAFLLGRELQTGFRLWRLRAADQRTTRRPD
Ga0137372_110826123	3300012350	Vadose Zone Soil	ETLEFVLLLSGWVVAFLLGRELQTGFRQWRMRTAEQRARTDD*
Ga0137368_102650593	3300012358	Vadose Zone Soil	MARPSIGVLMMPVETLEFVLLLSGWVVAFLLGRELQTGFRQWRMRTAEQRARTDD*
Ga0137385_115675651	3300012359	Vadose Zone Soil	LRDAPNDLEKPLISPEILEFLLLLSGWVVAFLLGRELQTGVRQWRLRLAEQRARRED*
Ga0137390_106228182	3300012363	Vadose Zone Soil	MPVETLEFLLLLSGWVVAFLLGRELQIGFREWRLRAAGQRTRRPD*
Ga0150984_1099465803	3300012469	Avena Fatua Rhizosphere	METLEFVLLLSGWVVAFLMGRELQSGFRQWRLRTAEQRARGDD*
Ga0150984_1120388101	3300012469	Avena Fatua Rhizosphere	LEFVLLLGGWVVAFLMGRELQTGFRQWRLRTVEQRINRQD*
Ga0150984_1228342151	3300012469	Avena Fatua Rhizosphere	MPVETLEFLLLLSGWVVAFLLGRELQTGFRQWRLHSAIQRAASREDQRS*
Ga0137416_115878881	3300012927	Vadose Zone Soil	MPAETLEFLLLLSGWVVAFLLGRELQTGFRLWRLRLA
Ga0137416_116227781	3300012927	Vadose Zone Soil	MPAETLEFLLLLSGWVVAFLLGRELQTGYRLWRLRLAEQRARSRQD*
Ga0137410_114386911	3300012944	Vadose Zone Soil	RYLEPPPLPALGRFPLIPAETLEFLLLLSGWVVAFLLGRELQTGFRLWRLKTAEQRARSRQD*
Ga0126369_113217382	3300012971	Tropical Forest Soil	MSVETLEFLLLLSGWVVAFLLGRELQAGYRMWRLKTAEQRARRDS*
Ga0126369_130657171	3300012971	Tropical Forest Soil	MSVETLEFLLLLSGWIVAFLLGRELQTGYRRWRLRVAEQRMTRRDR*
Ga0157378_117067262	3300013297	Miscanthus Rhizosphere	MPIEILEFVLLLTGWVVAFLLGRELQTGFREWRLRTAEQNQPNKER*
Ga0157375_113853412	3300013308	Miscanthus Rhizosphere	MPVETLEFVLLLSGWVVAFLLGRELQTGFRQWRLRTAEQRARIDD*
Ga0120155_10831953	3300013768	Permafrost	MPIETLEFLLLLGGWVVAFLLGRELQIGFCLWRVSTAEQRRR*
Ga0120123_10910684	3300013770	Permafrost	LLGGWVVAFLLGRELQTGFRQWRLRTAEQRLPRKDR*
Ga0120126_10326231	3300013831	Permafrost	MPTETLEFLLLLGGWVVAFLLGRELQTGFREWRLRTAEQRRKDR*
Ga0163163_112472542	3300014325	Switchgrass Rhizosphere	MSVETVEFMLLLGGWVVAFLLGRELQTGYRQWRLRTAEQRARNDQ*
Ga0132258_104398784	3300015371	Arabidopsis Rhizosphere	MARLPASEKLAMSMETLEFVLLLSGWVVAFLLGRELQNGFRQWRMRTAEQRARNDD*
Ga0132257_1032001863	3300015373	Arabidopsis Rhizosphere	MPTETVEFLLLLSGWVVAFLLGRELQSGFRQWRLRGAEQRINPRRDS*
Ga0066662_100576097	3300018468	Grasslands Soil	MPFETIEFLLLLSGWVVAFLLGKELQTGFRQWRTRAAEERIPRDEA
Ga0066662_103450002	3300018468	Grasslands Soil	MSPETLEFLLLLSGWIVTFLLSRELLTGIRQVRMRLAEQRARRED
Ga0066662_122671801	3300018468	Grasslands Soil	MSPETLEFLLLLSGWIVAFLLGRELQIGFRQWRLRTADQRTRRPD
Ga0066669_117863521	3300018482	Grasslands Soil	MPAETLEFLLLLSGWVVAFLLGRELQTGFRLWRLKTAEQRARSRQD
Ga0213873_100866712	3300021358	Rhizosphere	MPTDMLEFVLLLSGWVVAFLLGRELQTGFRLWRLKTAEQRTRRQD
Ga0213882_100520074	3300021362	Exposed Rock	MPVETVEFFLLLSGWIVAFLLGLELQTGYRQWRLRGAEQRIETRRD
Ga0213882_102010302	3300021362	Exposed Rock	MSVDTLEFLLLLSGWIVAFLLGRELQTGYRLWRLRAAEQRPRRDS
Ga0213876_101986561	3300021384	Plant Roots	MPTETMEFVLLLTGWVVAFLLGRELQTGFRQWRLRTAEQRARRDD
Ga0213876_103352711	3300021384	Plant Roots	EFVLLLSGWVVAFLLGRELQTGFRLWRLKTAEQRTRRQD
Ga0213876_106350942	3300021384	Plant Roots	MSFETLEFMLLLSGWVTVFLLGRELQTGFRQWRLKAAEQRAVTRRD
Ga0126371_112549052	3300021560	Tropical Forest Soil	MSVETVEFVLLLSGWVVAFLLGRELQTGFRQWRLRAAEQRTRRQD
Ga0207684_104507101	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSVETLEFLLLLSGWIVAFLLGRELQTGYRQWRLKVAEQRAPRDD
Ga0207684_113242282	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPAETLEFLLLLSGWVVAFLLGRELQTGFRLWRLRTAEQRARSRQD
Ga0207684_115860492	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPVETLEFLLLLSGWVVAFLLGRELQIGFREWRLRAAEQRTRRQD
Ga0207646_105791475	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LLLLSGWVVAFLLGRELQTGFRLWRLRTAEQRARSRQD
Ga0207646_114695742	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPVETLEFLLLLSGWVVAFLLGRELQTGFHQWRVRTAEQRPPRKDR
Ga0207700_114281122	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MSFETVEFLLLLSGWVVAFLLGRELQTGFRQWRLRAAEQRAETRRD
Ga0207711_103989072	3300025941	Switchgrass Rhizosphere	MPVETLEFVLLLSGWVIAFLLGRELQTAFRQGRLRTAEQRARTDD
Ga0207702_107350683	3300026078	Corn Rhizosphere	MPTETLQFLLLLGGWVVAFLLGRELQTGFRLWRLRTAEQRRKDR
Ga0209161_102105362	3300026548	Soil	MPLMSPETLEFLLLLSGWIVAFLLGRELQIGFRQWRLRTAEQRTRRPD
Ga0209689_10460087	3300027748	Soil	MPLMSPETLEFLLLLSGWIVAFLLGRELQIGFRQWRLRTADQRTRRPD
Ga0209166_100367198	3300027857	Surface Soil	MSVETLEFLLLLGGWIVAFLLGRELQTGYRLWRLRVAEERIRRDS
Ga0209166_103727881	3300027857	Surface Soil	MPTETLEFLLLLGGWVVAFLLGRELQTGFRLWRVRTAEQ
Ga0209166_106113063	3300027857	Surface Soil	MPVETLEFLLLLGGWIVAFLLGRELQTGYRQWRLRTAEQRARRQD
Ga0209590_102089562	3300027882	Vadose Zone Soil	MPAETLEFLLLLSGWVVAFLLGRELQTGFRQWRLRLAEQRARSRQD
Ga0209168_101627982	3300027986	Surface Soil	MSVETLEFLLLLSGWIVAFLLGRELQTGYRLWRLRGAEQRTQRNDVRR
Ga0137415_102090312	3300028536	Vadose Zone Soil	MPAETLEFLLLLSGWVVAFLLGRELQTGFRLWRLRLAEQRARGRQD
Ga0307479_112045544	3300031962	Hardwood Forest Soil	RIPRLYSPALMSVETLEFLLLLSGWIVAFLLGRELQTGYRLWRLRTAEQRARRQD
Ga0306920_1028224422	3300032261	Soil	MSVETLEFLLLLSGWIVAFLLGRELQTGYRLWRLRVAEQRTPRRDR
Ga0372946_0080242_436_573	3300034384	Soil	MPVETLQFLLLLSGWVVAFLLGRELQTGFREWRLRTAEQRARRPE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040657

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences