Metagenome / Metatranscriptome Family F040568

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040568
Family Type	Metagenome / Metatranscriptome
Number of Sequences	161
Average Sequence Length	46 residues
Representative Sequence	RAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFAG
Number of Associated Samples	117
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.62 %
% of genes near scaffold ends (potentially truncated)	96.89 %
% of genes from short scaffolds (< 2000 bps)	86.96 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.758 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (33.540 % of family members)
Environment Ontology (ENVO)	Unclassified (60.248 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.354 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.29% β-sheet: 0.00% Coil/Unstructured: 76.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF00149	Metallophos	18.01
PF04480	DUF559	15.53
PF10518	TAT_signal	11.80
PF01797	Y1_Tnp	10.56
PF04185	Phosphoesterase	10.56
PF10604	Polyketide_cyc2	6.21
PF12850	Metallophos_2	2.48
PF02954	HTH_8	1.24
PF00990	GGDEF	1.24
PF02585	PIG-L	0.62
PF00072	Response_reg	0.62
PF02371	Transposase_20	0.62
PF02368	Big_2	0.62
PF13522	GATase_6	0.62
PF09134	Invasin_D3	0.62
PF00158	Sigma54_activat	0.62
PF02518	HATPase_c	0.62
PF04402	SIMPL	0.62
PF01380	SIS	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	10.56
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	10.56
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.62
COG2859	Outer membrane channel-forming protein BP26/OMP28, SIMPL family	Cell wall/membrane/envelope biogenesis [M]	0.62
COG2968	Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domain	Function unknown [S]	0.62
COG3471	Predicted secreted (periplasmic) protein	Function unknown [S]	0.62
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.76 %
Unclassified	root	N/A	1.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.76 %
Unclassified	root	N/A	1.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.76 %
Unclassified	root	N/A	1.24 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	76.40 %
Unclassified	root	N/A	1.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	76.40 %
Unclassified	root	N/A	1.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	40.37 %
Unclassified	root	N/A	1.24 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	37.27 %
Gemmatimonadetes bacterium 13_2_20CM_2_69_23	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_69_23	3.11 %
Unclassified	root	N/A	1.24 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	37.27 %
Gemmatimonadetes bacterium 13_2_20CM_2_69_23	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_69_23	3.11 %
Unclassified	root	N/A	1.24 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	37.27 %
Gemmatimonadetes bacterium 13_2_20CM_2_69_23	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_69_23	3.11 %
Unclassified	root	N/A	1.24 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.62 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	37.27 %
Gemmatimonadetes bacterium 13_2_20CM_2_69_23	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_69_23	3.11 %
Unclassified	root	N/A	1.24 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10020092	All Organisms → cellular organisms → Bacteria	2385	Open in IMG/M
3300002561\|JGI25384J37096_10033612	All Organisms → cellular organisms → Bacteria	1997	Open in IMG/M
3300002561\|JGI25384J37096_10119319	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	887	Open in IMG/M
3300002561\|JGI25384J37096_10137019	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	799	Open in IMG/M
3300002562\|JGI25382J37095_10230763	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300002908\|JGI25382J43887_10034199	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2752	Open in IMG/M
3300002908\|JGI25382J43887_10061188	All Organisms → cellular organisms → Bacteria	2039	Open in IMG/M
3300002908\|JGI25382J43887_10350569	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	626	Open in IMG/M
3300005166\|Ga0066674_10229587	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	882	Open in IMG/M
3300005166\|Ga0066674_10308617	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	743	Open in IMG/M
3300005171\|Ga0066677_10127785	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1373	Open in IMG/M
3300005171\|Ga0066677_10497207	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	700	Open in IMG/M
3300005174\|Ga0066680_10190539	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1294	Open in IMG/M
3300005174\|Ga0066680_10244978	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1138	Open in IMG/M
3300005176\|Ga0066679_10416819	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	879	Open in IMG/M
3300005177\|Ga0066690_10674827	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	686	Open in IMG/M
3300005178\|Ga0066688_10279334	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1074	Open in IMG/M
3300005179\|Ga0066684_10204098	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1279	Open in IMG/M
3300005180\|Ga0066685_10392154	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	964	Open in IMG/M
3300005181\|Ga0066678_10179297	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300005181\|Ga0066678_10212753	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1238	Open in IMG/M
3300005187\|Ga0066675_10638259	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_69_23	800	Open in IMG/M
3300005187\|Ga0066675_10728087	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	746	Open in IMG/M
3300005406\|Ga0070703_10113419	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	973	Open in IMG/M
3300005440\|Ga0070705_100801036	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	749	Open in IMG/M
3300005445\|Ga0070708_100801254	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	885	Open in IMG/M
3300005445\|Ga0070708_100825065	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300005445\|Ga0070708_101182592	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	715	Open in IMG/M
3300005446\|Ga0066686_10080985	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2056	Open in IMG/M
3300005447\|Ga0066689_10437580	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_69_23	819	Open in IMG/M
3300005450\|Ga0066682_10397611	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	883	Open in IMG/M
3300005468\|Ga0070707_101581693	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	622	Open in IMG/M
3300005468\|Ga0070707_101785588	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	582	Open in IMG/M
3300005540\|Ga0066697_10624685	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	595	Open in IMG/M
3300005546\|Ga0070696_100704237	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	823	Open in IMG/M
3300005546\|Ga0070696_100769070	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	790	Open in IMG/M
3300005546\|Ga0070696_100835660	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	760	Open in IMG/M
3300005553\|Ga0066695_10352911	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	921	Open in IMG/M
3300005553\|Ga0066695_10473173	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_69_23	772	Open in IMG/M
3300005555\|Ga0066692_11011152	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	508	Open in IMG/M
3300005556\|Ga0066707_10561658	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	734	Open in IMG/M
3300005556\|Ga0066707_10803119	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300005557\|Ga0066704_10917411	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	541	Open in IMG/M
3300005574\|Ga0066694_10327922	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	727	Open in IMG/M
3300005576\|Ga0066708_10276967	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1071	Open in IMG/M
3300005586\|Ga0066691_10696670	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	601	Open in IMG/M
3300005586\|Ga0066691_10855419	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	535	Open in IMG/M
3300006031\|Ga0066651_10003628	All Organisms → cellular organisms → Bacteria	5697	Open in IMG/M
3300006032\|Ga0066696_10378347	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	923	Open in IMG/M
3300006032\|Ga0066696_11071420	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300006034\|Ga0066656_10588776	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	720	Open in IMG/M
3300006755\|Ga0079222_12058300	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	563	Open in IMG/M
3300006796\|Ga0066665_10202654	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1541	Open in IMG/M
3300006796\|Ga0066665_10647331	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	842	Open in IMG/M
3300006797\|Ga0066659_10283097	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300006797\|Ga0066659_10830522	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	767	Open in IMG/M
3300006806\|Ga0079220_11077213	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	648	Open in IMG/M
3300006903\|Ga0075426_10140815	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1738	Open in IMG/M
3300006903\|Ga0075426_10992927	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	634	Open in IMG/M
3300007255\|Ga0099791_10213829	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	910	Open in IMG/M
3300007265\|Ga0099794_10537156	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	617	Open in IMG/M
3300009012\|Ga0066710_101625970	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	988	Open in IMG/M
3300009089\|Ga0099828_11770855	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	543	Open in IMG/M
3300009090\|Ga0099827_11126688	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	681	Open in IMG/M
3300009147\|Ga0114129_11365614	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	876	Open in IMG/M
3300009162\|Ga0075423_10002192	All Organisms → cellular organisms → Bacteria	17609	Open in IMG/M
3300009795\|Ga0105059_1048456	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	560	Open in IMG/M
3300010106\|Ga0127472_1099466	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300010301\|Ga0134070_10107736	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	975	Open in IMG/M
3300010301\|Ga0134070_10373459	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_69_23	557	Open in IMG/M
3300010320\|Ga0134109_10092930	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1043	Open in IMG/M
3300010321\|Ga0134067_10059780	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300010323\|Ga0134086_10172402	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	798	Open in IMG/M
3300010329\|Ga0134111_10160247	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300010333\|Ga0134080_10657336	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	516	Open in IMG/M
3300010335\|Ga0134063_10114764	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1230	Open in IMG/M
3300010337\|Ga0134062_10546962	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300012198\|Ga0137364_11062169	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	610	Open in IMG/M
3300012198\|Ga0137364_11125996	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	590	Open in IMG/M
3300012199\|Ga0137383_10375162	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1042	Open in IMG/M
3300012199\|Ga0137383_10395289	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300012199\|Ga0137383_10405909	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	998	Open in IMG/M
3300012199\|Ga0137383_10673899	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	756	Open in IMG/M
3300012203\|Ga0137399_10432898	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1099	Open in IMG/M
3300012203\|Ga0137399_11782692	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	504	Open in IMG/M
3300012206\|Ga0137380_10711452	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	871	Open in IMG/M
3300012207\|Ga0137381_10422895	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1163	Open in IMG/M
3300012207\|Ga0137381_10796310	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	819	Open in IMG/M
3300012207\|Ga0137381_11059084	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	698	Open in IMG/M
3300012211\|Ga0137377_10673645	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	970	Open in IMG/M
3300012211\|Ga0137377_11203611	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	687	Open in IMG/M
3300012285\|Ga0137370_10005281	All Organisms → cellular organisms → Bacteria	5855	Open in IMG/M
3300012349\|Ga0137387_11153546	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	549	Open in IMG/M
3300012356\|Ga0137371_11149925	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	581	Open in IMG/M
3300012359\|Ga0137385_10962258	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	705	Open in IMG/M
3300012360\|Ga0137375_10436554	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1133	Open in IMG/M
3300012582\|Ga0137358_10010797	All Organisms → cellular organisms → Bacteria	5680	Open in IMG/M
3300012685\|Ga0137397_10446246	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	964	Open in IMG/M
3300012918\|Ga0137396_10718975	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	736	Open in IMG/M
3300012918\|Ga0137396_10939717	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	631	Open in IMG/M
3300012922\|Ga0137394_11552982	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	520	Open in IMG/M
3300012925\|Ga0137419_10775355	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	783	Open in IMG/M
3300012925\|Ga0137419_10805855	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	768	Open in IMG/M
3300012929\|Ga0137404_10086427	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2498	Open in IMG/M
3300012929\|Ga0137404_11761375	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	576	Open in IMG/M
3300012931\|Ga0153915_12254901	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	637	Open in IMG/M
3300012972\|Ga0134077_10034256	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300012972\|Ga0134077_10046662	All Organisms → cellular organisms → Bacteria	1588	Open in IMG/M
3300012975\|Ga0134110_10185432	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	869	Open in IMG/M
3300012977\|Ga0134087_10078663	All Organisms → cellular organisms → Bacteria	1348	Open in IMG/M
3300015054\|Ga0137420_1310643	All Organisms → cellular organisms → Bacteria	2998	Open in IMG/M
3300015241\|Ga0137418_10016040	All Organisms → cellular organisms → Bacteria	6921	Open in IMG/M
3300015264\|Ga0137403_10745218	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	838	Open in IMG/M
3300015359\|Ga0134085_10316880	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	688	Open in IMG/M
3300017654\|Ga0134069_1381037	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300017659\|Ga0134083_10030903	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300018431\|Ga0066655_10046013	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2222	Open in IMG/M
3300018431\|Ga0066655_10634177	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	722	Open in IMG/M
3300018433\|Ga0066667_10407547	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1100	Open in IMG/M
3300018433\|Ga0066667_11739818	Not Available	561	Open in IMG/M
3300018433\|Ga0066667_11852844	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300018468\|Ga0066662_11371062	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	730	Open in IMG/M
3300018482\|Ga0066669_10745641	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	864	Open in IMG/M
3300018482\|Ga0066669_10999729	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	754	Open in IMG/M
3300020004\|Ga0193755_1000131	All Organisms → cellular organisms → Bacteria	20683	Open in IMG/M
3300025898\|Ga0207692_10787445	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	621	Open in IMG/M
3300025922\|Ga0207646_11501833	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	583	Open in IMG/M
3300025922\|Ga0207646_11539592	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	575	Open in IMG/M
3300026296\|Ga0209235_1195977	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	714	Open in IMG/M
3300026297\|Ga0209237_1109419	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1192	Open in IMG/M
3300026298\|Ga0209236_1008620	All Organisms → cellular organisms → Bacteria → Proteobacteria	6065	Open in IMG/M
3300026300\|Ga0209027_1225998	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300026301\|Ga0209238_1226826	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	551	Open in IMG/M
3300026301\|Ga0209238_1270162	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	510	Open in IMG/M
3300026307\|Ga0209469_1018407	All Organisms → cellular organisms → Bacteria	2486	Open in IMG/M
3300026310\|Ga0209239_1292902	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300026313\|Ga0209761_1235100	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	748	Open in IMG/M
3300026318\|Ga0209471_1144382	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	990	Open in IMG/M
3300026324\|Ga0209470_1011697	All Organisms → cellular organisms → Bacteria	5171	Open in IMG/M
3300026325\|Ga0209152_10483968	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_69_23	507	Open in IMG/M
3300026326\|Ga0209801_1146467	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	998	Open in IMG/M
3300026329\|Ga0209375_1065872	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1736	Open in IMG/M
3300026332\|Ga0209803_1105972	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1143	Open in IMG/M
3300026333\|Ga0209158_1148414	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	859	Open in IMG/M
3300026334\|Ga0209377_1175398	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	762	Open in IMG/M
3300026334\|Ga0209377_1199474	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300026342\|Ga0209057_1058595	All Organisms → cellular organisms → Bacteria	1757	Open in IMG/M
3300026343\|Ga0209159_1023056	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3460	Open in IMG/M
3300026529\|Ga0209806_1003386	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	9502	Open in IMG/M
3300026529\|Ga0209806_1074238	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1521	Open in IMG/M
3300026537\|Ga0209157_1286830	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	610	Open in IMG/M
3300026538\|Ga0209056_10341236	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	993	Open in IMG/M
3300026547\|Ga0209156_10019443	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4114	Open in IMG/M
3300026547\|Ga0209156_10453419	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300027725\|Ga0209178_1212430	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	688	Open in IMG/M
3300027748\|Ga0209689_1026327	All Organisms → cellular organisms → Bacteria	3515	Open in IMG/M
3300027846\|Ga0209180_10418430	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	758	Open in IMG/M
3300027903\|Ga0209488_10794638	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	671	Open in IMG/M
3300031590\|Ga0307483_1023623	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	615	Open in IMG/M
3300032180\|Ga0307471_100620973	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1241	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.52%
Host-Associated	Host-Associated	2.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.89%
Plants	Host-Associated → Plants	2.48%
Aquatic	Environmental → Aquatic	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.48%
Freshwater	Environmental → Aquatic → Freshwater	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.96%
Loam	Environmental → Terrestrial → Soil → Loam	9.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.62%
Sand	Environmental → Terrestrial → Soil → Sand	0.62%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	49.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.24%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.24%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.62%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	33.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	16.15%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.07%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.24%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.24%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009795	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50	Environmental	Open in IMG/M
3300010106	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031590	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100200921	3300002558	Grasslands Soil	ATPGLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG*
JGI25384J37096_100336123	3300002561	Grasslands Soil	LRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG*
JGI25384J37096_101193192	3300002561	Grasslands Soil	PPLRAGYDAVGNTRYTPIEPKNLLARATSALRLAKGEAAANWIRAFDA*
JGI25384J37096_101370191	3300002561	Grasslands Soil	TPGLRAGYDAVGNARYTPIEPKNLLSRATTALRTAKGQGGPNWIQGFNS*
JGI25382J37095_102307632	3300002562	Grasslands Soil	VKTLTGATPGLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG*
JGI25382J43887_100341991	3300002908	Grasslands Soil	TPGLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGXAG*
JGI25382J43887_100611881	3300002908	Grasslands Soil	VPGLRVGYDAVSNARYTPIEPKNLLARATTALRAAKAQGGPNWIQGFAG*
JGI25382J43887_100905103	3300002908	Grasslands Soil	LARGVKTLTGATPGLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG
JGI25382J43887_103505692	3300002908	Grasslands Soil	PADGAPPLRVGYDAVGNTRYTPVEPKNLLSRATSALRIAKTEAAANWIRGYEQA*
Ga0066674_102295872	3300005166	Soil	GLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG*
Ga0066674_103086171	3300005166	Soil	GLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFNS*
Ga0066677_101277852	3300005171	Soil	GLRAGYDAVGNARYTPIEPKNLLARATTALRTAKGQGGPGWIQGFT*
Ga0066677_104972072	3300005171	Soil	GLRAGYDAVGNARYTPIEPKNLLARATTALRTAKGQGGPGWIQGFRG*
Ga0066680_101905391	3300005174	Soil	KTLTGATPGLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG*
Ga0066680_102449783	3300005174	Soil	RPSLRAGYDAVANARYAAVEPRNLLTRATSALRAAKGMGAPNWIQAFRG*
Ga0066679_104168191	3300005176	Soil	RAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG*
Ga0066690_106748271	3300005177	Soil	AVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFNS*
Ga0066688_102793342	3300005178	Soil	VGNTRYTPVEPKNLLSRATSALRIAKTEAAANWIRGYEQA*
Ga0066684_102040981	3300005179	Soil	AGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFNS*
Ga0066685_103921541	3300005180	Soil	GATPGLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQSGPNWIQGFGG*
Ga0066678_101792973	3300005181	Soil	GLRAGYDAVTNARYTPIEPKNLLGRATSALRVAKTDGGGAGWIRAFQ*
Ga0066678_102127533	3300005181	Soil	VGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG*
Ga0066675_106382592	3300005187	Soil	GNTRYTPVEPKNLLARATSALRLAKGDAAANWIRAFDAA*
Ga0066675_107280871	3300005187	Soil	RAGYDAVGNARYTPIEPKNLLARATTALRTAKGQGGPGWIQGFRG*
Ga0070703_101134193	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	GIATAAGDERPSLRAGYDAVANARYAAIEPRNLLTRATSALRAAKGMGAPNWIQAFRG*
Ga0070705_1008010361	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	SESGTPGPGLRAGYDAVGNARYTPIEPKNLLARATTALRAAKGRGGPDWIQGFTLTP*
Ga0070708_1008012542	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GYDAVGNARYTPIEPKNLLARATTALRAAKGQGGPNWIQGFTG*
Ga0070708_1008250651	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GNARYTPIEPKNLLARATTALRAAKGRGGPDWIQGFTLTP*
Ga0070708_1011825922	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	GVKTLAGATPGLRAGYDAVGNARYTPIEPKNLLARATTALRAAKGQGGLNWIQGFGG*
Ga0066686_100809851	3300005446	Soil	YDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYTLTP*
Ga0066689_104375802	3300005447	Soil	RAGYDAVGNTRYTPVEPKNLLARATSALRLAKGEAGANWIRAFDAA*
Ga0066682_103976112	3300005450	Soil	VGNARYTPIEPKHLLARATSALRTAKGQGGPEWIQGFQG*
Ga0070707_1015816931	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	AGATPGLRAGYDAVGNVRYTPIEPKNLLARATTALRAAKGQGGLNWIQGFGG*
Ga0070707_1017855882	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	YDAVANARYAAVEPRNLLTRATSALRAAKGMGAPNWIQAFRG*
Ga0066697_106246852	3300005540	Soil	VGNARYTPIEPKNLLARATTALRTAKGQGGPGWIQGCT*
Ga0070696_1007042372	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	DAVGNARYTPIEPKNLLARATTALRAAKGRGGPDWIQGFTG*
Ga0070696_1007690703	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	DAVGNARYTPIEPKNLLARATTALRAAKGRGGPDWIQGFTLTP*
Ga0070696_1008356601	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	AAGDERPSLRAGYDAVANARYAAVEPRNLLTRATSALRAAKGMGAPNWIQAFRG*
Ga0066695_103529112	3300005553	Soil	DAVGNTRYTPVEPKNLLSRATSALRIAKTEAAANWIRGYEQA*
Ga0066695_104731732	3300005553	Soil	EPPALRAGYDAVGNTRYTPVEPKNLLARATSALRLAKGDAAANWIRAFDAA*
Ga0066692_110111521	3300005555	Soil	VGNTRYTPVEPKNLLSRATSALRIAKTEAAANWIRAYEQA*
Ga0066707_105616582	3300005556	Soil	RAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFNS*
Ga0066707_108031191	3300005556	Soil	KTLTGATPGLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFNS*
Ga0066704_109174111	3300005557	Soil	TGATPGLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG*
Ga0066694_103279222	3300005574	Soil	GYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG*
Ga0066708_102769671	3300005576	Soil	DAVGNARYTPIEPKNLLARATTALRAAKGLGGPDWIQGFTG*
Ga0066691_106966701	3300005586	Soil	RAGYDAVANARYAAVEPRNLLTRATSALRAAKGMGAPNWIQAFRG*
Ga0066691_108554192	3300005586	Soil	GNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG*
Ga0066651_100036288	3300006031	Soil	RYTPIEPKNLLARATTALRTAKGQGGPGWIQGFT*
Ga0066696_103783471	3300006032	Soil	RYTPIEPKNLLARATTALRTAKGQGGPGWIQGFRG*
Ga0066696_110714201	3300006032	Soil	NARYTPIEPKNLLGRATSALRVAKTDGGGAGWIRAFQ*
Ga0066656_105887761	3300006034	Soil	YDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFNS*
Ga0079222_120583001	3300006755	Agricultural Soil	ARYAAVEPKNLLARATSALRAAKGMGTPNWIQPFRE*
Ga0066665_102026543	3300006796	Soil	GNARYTPIEPKNLLARATTALRAAKGQGGPNWIEGFRG*
Ga0066665_106473312	3300006796	Soil	TLAGATPGLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFNS*
Ga0066659_102830971	3300006797	Soil	DAVGNVRYTPIEPKNLLARATTGLRAAKGKGGPNWIQGFTLTP*
Ga0066659_108305221	3300006797	Soil	TNARYTPIEPKNLLGRATSALRVAKTDAGLGWIRAFQ*
Ga0079220_110772131	3300006806	Agricultural Soil	SAAPGARPSLRAGYDAVANARYTPVEPKKMLARATSALRNAKGLGGPNWIQAFRG*
Ga0075426_101408151	3300006903	Populus Rhizosphere	RLARGIATAAGDERPSLRAGYDAVSNARYAAVEPRNLLTRATSALRAAKGMGAPNWIQAFRG*
Ga0075426_109929271	3300006903	Populus Rhizosphere	RAGYDAVGNARYTPIEPKNLLARATTALRAAKGQGGLNWIQGFGG*
Ga0099791_102138292	3300007255	Vadose Zone Soil	PGLRAGYDAVGNARYTPIEPKNLLARATTALRAAKGQGGPNWIQGFTG*
Ga0099794_105371562	3300007265	Vadose Zone Soil	NARYTPIEPKNLLARATTALRAAKAQGGPNWIQGFAG*
Ga0066710_1016259702	3300009012	Grasslands Soil	GYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG
Ga0099828_117708551	3300009089	Vadose Zone Soil	YDAVGNARYTPIEPKNLLARATTALRAAKGQGGLNWIQGFAG*
Ga0099827_111266882	3300009090	Vadose Zone Soil	DAVGNARYTPIEPKNLLARATTALRAAKGQGGPNWIQGFGG*
Ga0114129_113656141	3300009147	Populus Rhizosphere	DAVGNARYTPIEPKNLLARATTALRAAKGQGGLNWIQGFGG*
Ga0075423_100021921	3300009162	Populus Rhizosphere	PGLRVGYDAVGNARYTPIEPKNLLARATTALRAAKGQGAPNWIQGFTG*
Ga0105059_10484562	3300009795	Groundwater Sand	GGAPARSLRAGYDAVGNARYTPIEPKNLLARATTALRAAKGQGAPNWIQGFGG*
Ga0127472_10994663	3300010106	Grasslands Soil	LRAGYDAVANARYTPIEPKNLLGRATSALRVAKTDGGGAGWIRAFQ*
Ga0134070_101077361	3300010301	Grasslands Soil	NARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYALTP*
Ga0134070_103734592	3300010301	Grasslands Soil	ALRAGYDAVGNTRYTPVEPKNLLARATSALRIAKGEAGANWIRAFDAA*
Ga0134109_100929301	3300010320	Grasslands Soil	EAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFNS*
Ga0134067_100597803	3300010321	Grasslands Soil	YDAVTNARYTPIEPKNLLGRATSALRVAKTDGGGPGWIREFR*
Ga0134086_101724022	3300010323	Grasslands Soil	LAGATPGLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYALTP*
Ga0134111_101602472	3300010329	Grasslands Soil	YDAVGKTRYTPVEPKNLLARAASALRLAKSEAATNWIRAFDA*
Ga0134080_106573361	3300010333	Grasslands Soil	YDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFAG*
Ga0134063_101147642	3300010335	Grasslands Soil	ARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFNS*
Ga0134062_105469621	3300010337	Grasslands Soil	DAVGNARYTPIEPKNLLARATTALRAAKGLGGPNWIQGFSA*
Ga0137364_110621691	3300012198	Vadose Zone Soil	DAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFDS*
Ga0137364_111259961	3300012198	Vadose Zone Soil	RQDGDTPAPGLRAGYDEVGNARYTQIEPKNLLARATTALRTAKGQGGPGWIQGFTG*
Ga0137383_103751622	3300012199	Vadose Zone Soil	YDAVGNARYTPIEPKNLLARATTALRAAKGLGGPNWIQGFSA*
Ga0137383_103952892	3300012199	Vadose Zone Soil	AVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFAG*
Ga0137383_104059094	3300012199	Vadose Zone Soil	YDAVGNARYTPIEPKNLLARATTALRAAKGLGGPNWIQGFTA*
Ga0137383_106738992	3300012199	Vadose Zone Soil	RYTPIEPKNLLARATTALRAAKGKGGPNWIQGFTLTP*
Ga0137399_104328983	3300012203	Vadose Zone Soil	SNARYTPIEPKNLLARATTALRAAKGQGGPNWIQGFTG*
Ga0137399_117826921	3300012203	Vadose Zone Soil	AGESAPGLRAGYDAVGNARYTPIEPKNLLARATTALRAAKGQGGPNWIQGFGG*
Ga0137380_107114521	3300012206	Vadose Zone Soil	VGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFALTP*
Ga0137381_104228951	3300012207	Vadose Zone Soil	GNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFAG*
Ga0137381_107963101	3300012207	Vadose Zone Soil	PGLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFALTP*
Ga0137381_110590841	3300012207	Vadose Zone Soil	VKTLAGATPGLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG*
Ga0137377_106736453	3300012211	Vadose Zone Soil	VGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYALTP*
Ga0137377_112036111	3300012211	Vadose Zone Soil	ATPGLRAGYDAVGNARYTPIEPKNLLSRATTALRTAKGQGGPNWIQGFNS*
Ga0137370_100052817	3300012285	Vadose Zone Soil	VPDLRAGYDAVGNARYTPIEPKNLLARAATALRAAKGLGGPDWIQGFTG*
Ga0137387_111535461	3300012349	Vadose Zone Soil	TPGLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFAG*
Ga0137371_111499252	3300012356	Vadose Zone Soil	AVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG*
Ga0137385_109622581	3300012359	Vadose Zone Soil	TPGLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG*
Ga0137375_104365541	3300012360	Vadose Zone Soil	GYDAVGNARYTPIEPKNLLARATTALRAAKGQGAPNWIQGFTG*
Ga0137358_100107976	3300012582	Vadose Zone Soil	LRAGYDAVGNVRYTPIEPKNLLARATTALRAAKVQGGPNWIQGFTLTP*
Ga0137397_104462461	3300012685	Vadose Zone Soil	NARYMPIEPKNLLARATTALRAAKGQGAPNWIQGFEG*
Ga0137396_107189751	3300012918	Vadose Zone Soil	RYTPIEPKNLLARATTALRAAKGQGAPNWIQGFGG*
Ga0137396_109397172	3300012918	Vadose Zone Soil	YTPIEPKNLLARATTALRAAKGLGGPNWIQGFTG*
Ga0137394_115529822	3300012922	Vadose Zone Soil	VGNARYTPIEPKNLLARAATALRAAKGQGAPNWIQGFAG*
Ga0137419_107753552	3300012925	Vadose Zone Soil	DAVGNVRYTPIEPKNLLARATTALRAAKGQGGPNWIQGFTLTP*
Ga0137419_108058551	3300012925	Vadose Zone Soil	RAVARASGDAAPAPGLRAGYDAVGNARYTPIEPKNLLARATTALRAAKGQGAPNWIQGFGG*
Ga0137404_100864271	3300012929	Vadose Zone Soil	SGESAPGLRAGYDAVGNVRYTPIEPKNLLARATTALRAAKGQGGPNWIQGFTLTP*
Ga0137404_117613751	3300012929	Vadose Zone Soil	PIEPKNLLARATTALRAAKGQGGPNWIQGFTLTP*
Ga0153915_122549011	3300012931	Freshwater Wetlands	RPSLRAGYDAVANARYTPVEPKKMLARATTALRTAKGMGGPNWIQAFRG*
Ga0134077_100342563	3300012972	Grasslands Soil	YDAVGNTRYTPVEPKHLLARATSALRLAKGDATANWIRAFDA*
Ga0134077_100466621	3300012972	Grasslands Soil	VPGLRVGYDAVSNARYTPIEPKNLLARATTALRAAKAQGEPNWIQGFAG*
Ga0134110_101854322	3300012975	Grasslands Soil	RAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQSGPNWIQGFGG*
Ga0134087_100786631	3300012977	Grasslands Soil	PLRAGYDAVGNTRYTPVEPKHLLARATSALRLAKGDAAANWIRAFDG*
Ga0137420_13106431	3300015054	Vadose Zone Soil	VPGLRAGYDAVSNARYTPIEPKNLLARATTALRAAKGQGGPNWIPGFAG*
Ga0137418_100160405	3300015241	Vadose Zone Soil	LRAGYDAVGNTRYTPVEPKNLLARATSALRLAKGEAAANWIRAFDAA*
Ga0137403_107452181	3300015264	Vadose Zone Soil	DGHARVPGLRVGYDAVSNARYTPIEPKNLLARATTALRAAKAQGGPNWIQGFAG*
Ga0134085_103168802	3300015359	Grasslands Soil	RAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFAG*
Ga0134069_13810372	3300017654	Grasslands Soil	GYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFNS
Ga0134083_100309033	3300017659	Grasslands Soil	APPLRAGYDAVGNTRYTPVEPKHLLARATSALRLAKGDAAANWIRAFDG
Ga0066655_100460135	3300018431	Grasslands Soil	RAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYTLTP
Ga0066655_106341772	3300018431	Grasslands Soil	GGTPAPGLRAGYDAVGNARYTPIEPKNLLARASTALRAAKGQGGPNWIEGVRV
Ga0066667_104075471	3300018433	Grasslands Soil	GYDAVGNARYTPIEPKNLLSRATTALRAAKGQSVPNWIQGFGG
Ga0066667_117398181	3300018433	Grasslands Soil	NTRYTPVEPKHLLARATSALRLAKGDAAANWIRAFDG
Ga0066667_118528441	3300018433	Grasslands Soil	AVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFNS
Ga0066662_113710623	3300018468	Grasslands Soil	ATPGLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG
Ga0066669_107456411	3300018482	Grasslands Soil	PVPGLRAGYDAVGNARYTPIEPKNLLARATTALRTAKGQGGPGWIQGCT
Ga0066669_109997292	3300018482	Grasslands Soil	RYTPIEPKNLLARATTALRAAKGLGGPNWIQGFSG
Ga0193755_10001311	3300020004	Soil	RYTPIEPKNLLARATTALRAAKGQGGPNWIQGFTLTP
Ga0207692_107874452	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	PICAERLARGIATAAGDERPSLRAGYDAVANARYAAVEPRNLLTRATSALRAAKGMGAPNWIQAFRG
Ga0207646_115018332	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	YDAVANARYAAVEPRNLLTRATSALRAAKGMGAPNWIQAFRG
Ga0207646_115395921	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	GVKTLAGATPGLRAGYDAVGNARYTPIEPKNLLARATTALRAAKGQGGVNWIQGFGG
Ga0209235_11959772	3300026296	Grasslands Soil	SARVPGLRVGYDAVSNARYTPIEPKNLLARATTALRAAKAQGGPNWIQGFAG
Ga0209237_11094191	3300026297	Grasslands Soil	YDAVSNARYTPIEPKNLLARATTALRAAKAQGGPNWIQGFAG
Ga0209236_10086201	3300026298	Grasslands Soil	RGVKTLTGATPGLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG
Ga0209027_12259981	3300026300	Grasslands Soil	TAAPAEGLPGLRAGYDAVSNARYTPIEPKNLLGRATSALRVAKTAAGSGWIRAFQ
Ga0209238_12268262	3300026301	Grasslands Soil	VGNTRYTPVEPKNLLSRATSALRIAKTEAAANWIRGYEQA
Ga0209238_12701622	3300026301	Grasslands Soil	EGAPPLRAGYDAVGNTRYTPVEPKNLLSRATSALRIAKSEAAANWIRAYEQA
Ga0209469_10184071	3300026307	Soil	YDAVGNTRYTPVEPKHLLARATSALRLAKGDAAANWIRAFDG
Ga0209239_12929021	3300026310	Grasslands Soil	GGLPGLRAGYDAVANARYTPIEPKNLLGRATSALRVAKTNGGGPGWIRAFQ
Ga0209761_12351002	3300026313	Grasslands Soil	SVPGLRAGYDAVGNARYTPIEPKHLLARATTALRAAKGQEGPNWIQGFKG
Ga0209471_11443821	3300026318	Soil	DAVGNARYTPIEPKNLLARAATALRAAKGLGGPEWIQGFKG
Ga0209470_10116971	3300026324	Soil	GYDAVGNTRYTPVEPKHLLARATSALRLAKGDAAANWIRAFDA
Ga0209152_104839682	3300026325	Soil	YDAVGNTRYTPVEPKNLLARATSALRLAKGDAAANWIRAFDAA
Ga0209801_11464671	3300026326	Soil	GLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG
Ga0209375_10658721	3300026329	Soil	ARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFNS
Ga0209803_11059722	3300026332	Soil	VKMLTGATPGLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG
Ga0209158_11484143	3300026333	Soil	VGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG
Ga0209377_11753982	3300026334	Soil	GHTEGAPPLRAGYDAVGNTRYTPVEPKNLLSRATSALRIAKTEAAANWIRAYEQA
Ga0209377_11994742	3300026334	Soil	GYDAVTNARYTPIEPKHLLGRATSALRVAKTDAGPGWIRAFQ
Ga0209057_10585952	3300026342	Soil	GYDAVGNTRYTPVEPKHLLARATSALRLAKGDAAANWIRAFDG
Ga0209159_10230561	3300026343	Soil	PGLRAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFNS
Ga0209806_10033868	3300026529	Soil	VGNARYTPIEPKNLLARAATALRAAKGLGGPEWIQGFKG
Ga0209806_10742383	3300026529	Soil	AVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGYAG
Ga0209157_12868301	3300026537	Soil	TPIEPKNLLSRATTALRAAKGQGGPNWIQGYALTP
Ga0209056_103412362	3300026538	Soil	PGLRAGYDAVGNARYTPIEPKNLLARATTALRAAKGQGGPNWIEGFRG
Ga0209156_100194435	3300026547	Soil	ATPGLCAGYDAVGNARYTPIEPKNLLSRATTALRAAKGQGGPNWIQGFNS
Ga0209156_104534192	3300026547	Soil	DAVTNARYTPIEPKNLLGRATSALRVAKTDGGGAGWIRAFQ
Ga0209178_12124302	3300027725	Agricultural Soil	TAAGDERPSLRAGYDAVANARYAAVEPRNLLTRATSALRAAKGMGAPNWIQAFRG
Ga0209689_10263271	3300027748	Soil	LRAGYDAVGNTRYTPVEPKNLLARATSALRLAKGDAAANWIRAFDAA
Ga0209180_104184303	3300027846	Vadose Zone Soil	AVANARYTSVEPKNMLGRATSALRTAKAAADREWIQAFATS
Ga0209488_107946381	3300027903	Vadose Zone Soil	LAGATPGLRAGYDAVGNARYTPIEPKNLLARATTALRAAKGQGGPNWIQGFNS
Ga0307483_10236232	3300031590	Hardwood Forest Soil	ATAAGDERPSLRAGYDAVANARYAAVEPRNLLTRATSALRAAKGMGAPNWIQAFRG
Ga0307471_1006209733	3300032180	Hardwood Forest Soil	AAGDARPSLRAGYDAVPNARYAAVEPKNLLARATSALRAAKGMGTPNWIQPFRE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040568

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences