Metagenome / Metatranscriptome Family F040519

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040519
Family Type	Metagenome / Metatranscriptome
Number of Sequences	161
Average Sequence Length	70 residues
Representative Sequence	VIDELMGHQASSRGGHLRGSAIGAHYRHTTPEMAARVVEAIQQRLTVVLGVAELAVERHPNRSTLTVF
Number of Associated Samples	99
Number of Associated Scaffolds	161

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	14.91 %
% of genes near scaffold ends (potentially truncated)	72.67 %
% of genes from short scaffolds (< 2000 bps)	88.82 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (63.354 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (29.192 % of family members)
Environment Ontology (ENVO)	Unclassified (34.161 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.099 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.71% β-sheet: 0.00% Coil/Unstructured: 57.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 161 Family Scaffolds
PF02410	RsfS	3.11
PF00589	Phage_integrase	2.48
PF13191	AAA_16	1.86
PF13561	adh_short_C2	1.86
PF01037	AsnC_trans_reg	1.86
PF01527	HTH_Tnp_1	1.86
PF00196	GerE	1.24
PF02371	Transposase_20	1.24
PF01467	CTP_transf_like	1.24
PF03965	Penicillinase_R	1.24
PF00719	Pyrophosphatase	0.62
PF02985	HEAT	0.62
PF04101	Glyco_tran_28_C	0.62
PF08281	Sigma70_r4_2	0.62
PF00174	Oxidored_molyb	0.62
PF14659	Phage_int_SAM_3	0.62
PF02036	SCP2	0.62
PF13701	DDE_Tnp_1_4	0.62
PF13518	HTH_28	0.62
PF09335	SNARE_assoc	0.62
PF12728	HTH_17	0.62
PF13643	DUF4145	0.62
PF00264	Tyrosinase	0.62
PF04203	Sortase	0.62
PF00436	SSB	0.62
PF02803	Thiolase_C	0.62
PF01161	PBP	0.62
PF01638	HxlR	0.62
PF04525	LOR	0.62
PF01695	IstB_IS21	0.62
PF13546	DDE_5	0.62
PF01939	NucS	0.62
PF13560	HTH_31	0.62
PF03706	LPG_synthase_TM	0.62
PF01965	DJ-1_PfpI	0.62
PF13683	rve_3	0.62
PF13649	Methyltransf_25	0.62
PF12840	HTH_20	0.62
PF10935	DUF2637	0.62
PF08240	ADH_N	0.62
PF12697	Abhydrolase_6	0.62
PF00884	Sulfatase	0.62
PF01047	MarR	0.62
PF02653	BPD_transp_2	0.62
PF13185	GAF_2	0.62
PF13411	MerR_1	0.62

COG ID	Name	Functional Category	% Frequency in 161 Family Scaffolds
COG0799	Ribosomal silencing factor RsfS, regulates association of 30S and 50S subunits	Translation, ribosomal structure and biogenesis [J]	3.11
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.24
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.24
COG3682	Transcriptional regulator, CopY/TcrY family	Transcription [K]	1.24
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.62
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	0.62
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.62
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.62
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.62
COG0629	Single-stranded DNA-binding protein	Replication, recombination and repair [L]	0.62
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.62
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.62
COG1637	Endonuclease NucS, RecB family	Replication, recombination and repair [L]	0.62
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.62
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.62
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.62
COG2965	Primosomal replication protein N	Replication, recombination and repair [L]	0.62
COG3764	Sortase (surface protein transpeptidase)	Cell wall/membrane/envelope biogenesis [M]	0.62
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.62
COG4894	Putative phospholipid scramblase YxjI, Tubby2 superfamily	Lipid transport and metabolism [I]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.35 %
All Organisms	root	All Organisms	36.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.35 %
cellular organisms	root	All Organisms → cellular organisms	36.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.35 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	36.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.35 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	31.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.35 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	27.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.35 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.35 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.86 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.86 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.62 %
Jiangellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales	0.62 %
Kineosporiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales	0.62 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.62 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.62 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.35 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.86 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	1.24 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %
unclassified Propionibacteriales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales	0.62 %
Jiangellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae	0.62 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.62 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.62 %
Kineosporiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae	0.62 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.35 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	1.24 %
Propionibacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	0.62 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.62 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.62 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.62 %
Kineococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus	0.62 %
Jiangella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella	0.62 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.35 %
unclassified Microlunatus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → unclassified Microlunatus	1.24 %
unclassified Micromonospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora	0.62 %
unclassified Jiangella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → unclassified Jiangella	0.62 %
unclassified Geodermatophilus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → unclassified Geodermatophilus	0.62 %
Kineococcus rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus → Kineococcus rhizosphaerae	0.62 %
Propionibacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	0.62 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.62 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	63.35 %
Microlunatus sp. Gsoil 973	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → unclassified Microlunatus → Microlunatus sp. Gsoil 973	1.24 %
Micromonospora sp. MSM11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. MSM11	0.62 %
Jiangella sp. DSM 45060	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → unclassified Jiangella → Jiangella sp. DSM 45060	0.62 %
Geodermatophilus sp. DF01_2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → unclassified Geodermatophilus → Geodermatophilus sp. DF01_2	0.62 %
Kineococcus rhizosphaerae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus → Kineococcus rhizosphaerae	0.62 %
Propionibacteriales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	0.62 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.62 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_100003335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1364	Open in IMG/M
3300000956\|JGI10216J12902_103557492	Not Available	546	Open in IMG/M
3300003203\|JGI25406J46586_10048564	Not Available	1438	Open in IMG/M
3300004016\|Ga0058689_10033845	Not Available	890	Open in IMG/M
3300005186\|Ga0066676_10686112	Not Available	697	Open in IMG/M
3300005562\|Ga0058697_10054888	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1538	Open in IMG/M
3300005562\|Ga0058697_10140589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1044	Open in IMG/M
3300005562\|Ga0058697_10352870	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300005562\|Ga0058697_10531899	Not Available	605	Open in IMG/M
3300005937\|Ga0081455_10312481	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300005937\|Ga0081455_10821832	Not Available	582	Open in IMG/M
3300005981\|Ga0081538_10062361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2127	Open in IMG/M
3300005981\|Ga0081538_10244664	Not Available	688	Open in IMG/M
3300005981\|Ga0081538_10319765	Not Available	566	Open in IMG/M
3300006049\|Ga0075417_10215482	Not Available	913	Open in IMG/M
3300006058\|Ga0075432_10380828	Not Available	605	Open in IMG/M
3300006844\|Ga0075428_100654268	All Organisms → cellular organisms → Bacteria	1120	Open in IMG/M
3300006844\|Ga0075428_101310526	Not Available	761	Open in IMG/M
3300006845\|Ga0075421_100814901	Not Available	1073	Open in IMG/M
3300006846\|Ga0075430_100477546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1029	Open in IMG/M
3300006880\|Ga0075429_100205984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1723	Open in IMG/M
3300006894\|Ga0079215_10837748	Not Available	648	Open in IMG/M
3300006918\|Ga0079216_11074037	Not Available	631	Open in IMG/M
3300006969\|Ga0075419_10816462	Not Available	668	Open in IMG/M
3300009093\|Ga0105240_11142726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	827	Open in IMG/M
3300009094\|Ga0111539_10890857	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300009100\|Ga0075418_10739906	Not Available	1061	Open in IMG/M
3300009100\|Ga0075418_11597375	Not Available	708	Open in IMG/M
3300009147\|Ga0114129_10361205	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1921	Open in IMG/M
3300009147\|Ga0114129_11289754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	906	Open in IMG/M
3300009147\|Ga0114129_11494468	Not Available	830	Open in IMG/M
3300009156\|Ga0111538_12869759	Not Available	603	Open in IMG/M
3300009156\|Ga0111538_13943967	Not Available	513	Open in IMG/M
3300009789\|Ga0126307_10031928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4054	Open in IMG/M
3300009789\|Ga0126307_10419309	Not Available	1080	Open in IMG/M
3300009811\|Ga0105084_1051867	Not Available	728	Open in IMG/M
3300009811\|Ga0105084_1109564	Not Available	527	Open in IMG/M
3300009816\|Ga0105076_1060004	Not Available	699	Open in IMG/M
3300009840\|Ga0126313_10033424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3543	Open in IMG/M
3300009840\|Ga0126313_10067703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2560	Open in IMG/M
3300009840\|Ga0126313_10082785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → unclassified Geodermatophilus → Geodermatophilus sp. DF01_2	2329	Open in IMG/M
3300009840\|Ga0126313_10200643	Not Available	1531	Open in IMG/M
3300009840\|Ga0126313_10297233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1262	Open in IMG/M
3300009840\|Ga0126313_10765518	Not Available	784	Open in IMG/M
3300009840\|Ga0126313_11349393	Not Available	590	Open in IMG/M
3300010037\|Ga0126304_10305168	Not Available	1055	Open in IMG/M
3300010037\|Ga0126304_11238199	Not Available	512	Open in IMG/M
3300010038\|Ga0126315_10569901	Not Available	728	Open in IMG/M
3300010039\|Ga0126309_10082388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1618	Open in IMG/M
3300010040\|Ga0126308_11045342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300010040\|Ga0126308_11326158	Not Available	511	Open in IMG/M
3300010041\|Ga0126312_10011317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5978	Open in IMG/M
3300010041\|Ga0126312_10028285	All Organisms → cellular organisms → Bacteria	3740	Open in IMG/M
3300010041\|Ga0126312_10062624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2502	Open in IMG/M
3300010041\|Ga0126312_10163120	Not Available	1551	Open in IMG/M
3300010041\|Ga0126312_10881179	Not Available	652	Open in IMG/M
3300010041\|Ga0126312_10943464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → unclassified Propionibacteriales → Propionibacteriales bacterium	630	Open in IMG/M
3300010042\|Ga0126314_10854662	Not Available	671	Open in IMG/M
3300010044\|Ga0126310_10878348	Not Available	696	Open in IMG/M
3300010045\|Ga0126311_10935569	Not Available	705	Open in IMG/M
3300010145\|Ga0126321_1075691	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300010166\|Ga0126306_10901758	Not Available	717	Open in IMG/M
3300011000\|Ga0138513_100011458	Not Available	1118	Open in IMG/M
3300012208\|Ga0137376_11683516	Not Available	525	Open in IMG/M
3300012355\|Ga0137369_10281703	Not Available	1242	Open in IMG/M
3300012358\|Ga0137368_10913474	Not Available	534	Open in IMG/M
3300012360\|Ga0137375_10281211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Kineosporiales → Kineosporiaceae → Kineococcus → Kineococcus rhizosphaerae	1516	Open in IMG/M
3300012938\|Ga0162651_100009320	Not Available	1176	Open in IMG/M
3300014487\|Ga0182000_10561497	Not Available	543	Open in IMG/M
3300017965\|Ga0190266_11018307	Not Available	556	Open in IMG/M
3300018027\|Ga0184605_10140515	Not Available	1083	Open in IMG/M
3300018054\|Ga0184621_10019214	Not Available	2079	Open in IMG/M
3300018054\|Ga0184621_10299619	Not Available	567	Open in IMG/M
3300018073\|Ga0184624_10257273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → unclassified Microlunatus → Microlunatus sp. Gsoil 973	783	Open in IMG/M
3300018078\|Ga0184612_10102459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1499	Open in IMG/M
3300018081\|Ga0184625_10190558	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300018465\|Ga0190269_10635504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	730	Open in IMG/M
3300018466\|Ga0190268_11945007	Not Available	538	Open in IMG/M
3300018469\|Ga0190270_13186558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	519	Open in IMG/M
3300018476\|Ga0190274_10482548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. MSM11	1233	Open in IMG/M
3300019767\|Ga0190267_11304318	Not Available	542	Open in IMG/M
3300019869\|Ga0193705_1023440	Not Available	1340	Open in IMG/M
3300021080\|Ga0210382_10564079	Not Available	505	Open in IMG/M
3300022534\|Ga0224452_1225832	Not Available	574	Open in IMG/M
3300022694\|Ga0222623_10051544	Not Available	1583	Open in IMG/M
3300022694\|Ga0222623_10334589	Not Available	579	Open in IMG/M
3300022756\|Ga0222622_11273515	Not Available	541	Open in IMG/M
3300027379\|Ga0209842_1008130	Not Available	2080	Open in IMG/M
3300027490\|Ga0209899_1015398	Not Available	1734	Open in IMG/M
3300027577\|Ga0209874_1063776	Not Available	930	Open in IMG/M
3300027718\|Ga0209795_10112931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	775	Open in IMG/M
3300027873\|Ga0209814_10176286	Not Available	920	Open in IMG/M
3300028704\|Ga0307321_1143999	Not Available	504	Open in IMG/M
3300028707\|Ga0307291_1046467	Not Available	1040	Open in IMG/M
3300028708\|Ga0307295_10022817	Not Available	1539	Open in IMG/M
3300028712\|Ga0307285_10023946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1423	Open in IMG/M
3300028712\|Ga0307285_10025267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1392	Open in IMG/M
3300028712\|Ga0307285_10031063	Not Available	1276	Open in IMG/M
3300028712\|Ga0307285_10037414	Not Available	1181	Open in IMG/M
3300028714\|Ga0307309_10151206	Not Available	587	Open in IMG/M
3300028715\|Ga0307313_10102970	Not Available	868	Open in IMG/M
3300028716\|Ga0307311_10261999	Not Available	515	Open in IMG/M
3300028719\|Ga0307301_10033024	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1557	Open in IMG/M
3300028719\|Ga0307301_10140807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	774	Open in IMG/M
3300028720\|Ga0307317_10280635	Not Available	563	Open in IMG/M
3300028722\|Ga0307319_10026478	Not Available	1786	Open in IMG/M
3300028722\|Ga0307319_10206360	Not Available	643	Open in IMG/M
3300028744\|Ga0307318_10002164	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6454	Open in IMG/M
3300028744\|Ga0307318_10082810	Not Available	1077	Open in IMG/M
3300028744\|Ga0307318_10157876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	779	Open in IMG/M
3300028744\|Ga0307318_10182568	Not Available	724	Open in IMG/M
3300028744\|Ga0307318_10308983	Not Available	554	Open in IMG/M
3300028778\|Ga0307288_10463605	Not Available	521	Open in IMG/M
3300028787\|Ga0307323_10008635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3388	Open in IMG/M
3300028791\|Ga0307290_10211842	Not Available	710	Open in IMG/M
3300028796\|Ga0307287_10068463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1321	Open in IMG/M
3300028814\|Ga0307302_10282404	Not Available	815	Open in IMG/M
3300028814\|Ga0307302_10342186	Not Available	737	Open in IMG/M
3300028814\|Ga0307302_10427777	Not Available	655	Open in IMG/M
3300028814\|Ga0307302_10473550	Not Available	621	Open in IMG/M
3300028814\|Ga0307302_10648287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	525	Open in IMG/M
3300028819\|Ga0307296_10304560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	869	Open in IMG/M
3300028819\|Ga0307296_10837441	Not Available	501	Open in IMG/M
3300028828\|Ga0307312_10853049	Not Available	604	Open in IMG/M
3300028875\|Ga0307289_10128902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1038	Open in IMG/M
3300028876\|Ga0307286_10140242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300028876\|Ga0307286_10283312	Not Available	610	Open in IMG/M
3300028878\|Ga0307278_10046488	All Organisms → cellular organisms → Bacteria	1969	Open in IMG/M
3300028880\|Ga0307300_10076190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	984	Open in IMG/M
3300028880\|Ga0307300_10100048	Not Available	874	Open in IMG/M
3300028885\|Ga0307304_10208021	Not Available	839	Open in IMG/M
3300028885\|Ga0307304_10250403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → unclassified Jiangella → Jiangella sp. DSM 45060	771	Open in IMG/M
3300031548\|Ga0307408_100626495	Not Available	959	Open in IMG/M
3300031731\|Ga0307405_10087122	Not Available	2057	Open in IMG/M
3300031731\|Ga0307405_10137897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1696	Open in IMG/M
3300031731\|Ga0307405_10725549	Not Available	825	Open in IMG/M
3300031731\|Ga0307405_10872078	Not Available	759	Open in IMG/M
3300031824\|Ga0307413_10027918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3135	Open in IMG/M
3300031824\|Ga0307413_11563364	All Organisms → cellular organisms → Bacteria → Terrabacteria group	585	Open in IMG/M
3300031824\|Ga0307413_11918658	Not Available	532	Open in IMG/M
3300031852\|Ga0307410_10045929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2912	Open in IMG/M
3300031852\|Ga0307410_10733816	Not Available	835	Open in IMG/M
3300031901\|Ga0307406_10090044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2063	Open in IMG/M
3300031901\|Ga0307406_10202493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1462	Open in IMG/M
3300031901\|Ga0307406_11015143	Not Available	712	Open in IMG/M
3300031901\|Ga0307406_11788255	Not Available	546	Open in IMG/M
3300031903\|Ga0307407_10881867	Not Available	685	Open in IMG/M
3300031903\|Ga0307407_11177314	Not Available	598	Open in IMG/M
3300031911\|Ga0307412_10152711	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300031911\|Ga0307412_10868728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → unclassified Microlunatus → Microlunatus sp. Gsoil 973	788	Open in IMG/M
3300031995\|Ga0307409_100516123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1166	Open in IMG/M
3300032002\|Ga0307416_100007457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6958	Open in IMG/M
3300032002\|Ga0307416_100825131	Not Available	1024	Open in IMG/M
3300032002\|Ga0307416_102381090	Not Available	629	Open in IMG/M
3300032004\|Ga0307414_10038969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3197	Open in IMG/M
3300032126\|Ga0307415_100847216	Not Available	838	Open in IMG/M
3300032126\|Ga0307415_101855636	Not Available	584	Open in IMG/M
3300032159\|Ga0268251_10026720	Not Available	1759	Open in IMG/M
3300032159\|Ga0268251_10290865	Not Available	674	Open in IMG/M
3300032159\|Ga0268251_10532672	Not Available	530	Open in IMG/M
3300033551\|Ga0247830_10414508	Not Available	1050	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.98%
Host-Associated	Host-Associated	36.02%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.52%
Plants	Host-Associated → Plants	36.02%
Aquatic	Environmental → Aquatic	7.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.71%
Sediment	Environmental → Aquatic → Sediment	6.21%
Phylloplane	Host-Associated → Plants → Phylloplane	4.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.86%
Roots	Host-Associated → Plants → Roots	1.86%
Freshwater	Environmental → Aquatic → Freshwater	1.24%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.24%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	26.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.21%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	4.97%
Sand	Environmental → Terrestrial → Soil → Sand	3.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.86%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.86%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.24%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.62%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.62%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	26.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.21%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	4.97%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.86%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	1.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.24%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.24%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.62%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.62%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.62%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	29.19%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	15.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	15.53%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.56%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	4.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.73%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.48%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.86%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.86%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	1.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.24%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.24%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.62%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.62%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300027379	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1000033351	3300000956	Soil	FATWLEDAGIPARAIDELMGHEATGRGGQGLGSPMGAHYRHTTPEMATRVITAIEARLVVVLSVAEEALQTRRTRSFSRMF*
JGI10216J12902_1035574922	3300000956	Soil	ARVIDELMGHQASSRGGLRGSAIGAHYRHTTPEMAARTVDEIQQRLAVVLEVAELAVERHPARSTLRVF*
JGI25406J46586_100485642	3300003203	Tabebuia Heterophylla Rhizosphere	VVGDPLLDARVIDELLGHRASSRGHLGGSAIGAHYRHTTPEMAARVVDAIQQWLTVVVLGVAERAVERYPNRSTLTVF*
Ga0058689_100338451	3300004016	Agave	MGHEASTRCAQHLGSTMGAHYRHTTPEMATRVVMAIQDRLAVAVGVAEQVVEAQPTRVPRNTF*
Ga0066676_106861121	3300005186	Soil	RRAGQQRGSAIGAHYRHTTTEVAARIAAAVQERLTVVLQVAEHALEARPTRATPNVS*
Ga0058697_100548882	3300005562	Agave	MGHEPSTRGAQHLGSTMGAHYRHTTPEMATRVVMAIQDRLAVVVSVAEQVVEAQPTRMPRNVF*
Ga0058697_101405892	3300005562	Agave	MGHEATGRSGQQRGSAMGAHYRHTTPEMAARAMDAIQQRLRIVLQVAELVIESRLNRSAVRVF*
Ga0058697_103528701	3300005562	Agave	QQRGSAMGAHYRHTTPEMAARIAAAIEQRLNLVLEVAEQALEAQPNRSPHRMF*
Ga0058697_105318992	3300005562	Agave	HTYATWLEDAGIPARVIDELMGHQASSRGGHLGGSAIGAHYRHTTPEMAARVVEAMQQRLTVVVGVAELAVERHPNRSALRLF*
Ga0081455_103124812	3300005937	Tabebuia Heterophylla Rhizosphere	LEDAGIPARVIDELMGHEASTRGAQHLGSTMGAHYRHTTPEMATRVVMAVQDRLAVAISVAEQVVEAQPTKVPRNVF*
Ga0081455_108218322	3300005937	Tabebuia Heterophylla Rhizosphere	DEVMGHEATSRVGQQRGSAMGAHYRHTTPEMAARISAAIEQRLRVVLEVAEQALEAHPNRSTRRVF*
Ga0081538_100623612	3300005981	Tabebuia Heterophylla Rhizosphere	MGHEATGRSGQHQGSAMGIHYRHTTPEMAGRVIDAIQQRLTMVLRAAEQALEGHPNRSGLRVF*
Ga0081538_102446642	3300005981	Tabebuia Heterophylla Rhizosphere	RVIDELIGHEATSRGGQQRGSAMGARYRHTTPEMAARIATAIEQRLTVVLEVAEQALEAQPRRSTQRVF*
Ga0081538_103197651	3300005981	Tabebuia Heterophylla Rhizosphere	KQMDPQATGRAGLHQASAIGAHYRHTAPEMAARAVDAIQQRLTVVLQVADRTVESYPSRSALRVF*
Ga0075417_102154822	3300006049	Populus Rhizosphere	RVIDELMGHQAGSRGGHLRGSAIGAHYRHTTPEMAARVVDAIQQRLTVVLGVAERAVERHPNRSTLSVF*
Ga0075432_103808281	3300006058	Populus Rhizosphere	MGHEATSRAGQQRGSAMGAHYRHTTPEMAARIATAIERRLTVVLKVAEQALEARPNRSTQRVF*
Ga0075428_1006542683	3300006844	Populus Rhizosphere	MGHEATSRVGQQRGSAMGAHYRHTTPEMAARIAAAIERRLTVVLKVAEKALEARPNRSTQRVF*
Ga0075428_1013105261	3300006844	Populus Rhizosphere	FATWLEDAGVPARVIDEVMGHEATSRAGQQRGSAMGAHYRHTTPEMATRIAAAIEQRLTVVLKVADQALEAQPSRSTPRVF*
Ga0075421_1008149014	3300006845	Populus Rhizosphere	GQQRGSAMGAHYRHTTPEMAARIATAIDQRLTVVLEVAEQALKAHPNRSTQRVF*
Ga0075430_1004775462	3300006846	Populus Rhizosphere	AGIPARVIDELMGHQAGSRGHLRGSAIGAHYRHTTPEMAARAVEAIQQRLAVVLGVAELAVERHPNRSTLRVF*
Ga0075429_1002059841	3300006880	Populus Rhizosphere	EVMGHEATSRAGQQRGSAMGAHYRHTTPEMAARIATAIEQRLTVVLEVAEQALKAHPSRSTHRVF*
Ga0079215_108377482	3300006894	Agricultural Soil	ARVIDEVMGHEATSRTGQQRGSAMGAHYRHTTPEMAARIATAIEQRLTVVLEVAEQALEAHPHRSTQRAF*
Ga0079216_110740371	3300006918	Agricultural Soil	TWLEDAGIPARVIDELMGHQASSHGHLRGSAIGVHYRHTTPEMAARVVDAIQQRLTVVLQVAERTHEKHPNRSALRVF*
Ga0075419_108164621	3300006969	Populus Rhizosphere	MGHEATSRVGQQRGRAMGAHYRHTTPEMAARIAAAIEQRLTVVLKVAEKALEARPSRSTQRVF*
Ga0105240_111427264	3300009093	Corn Rhizosphere	EATSRGGQQRGSAMGAHYRHTTPEMAARIATAIEQRLTVVLKLAEQVLESHPYHSTHRVF
Ga0111539_108908572	3300009094	Populus Rhizosphere	DELMGHEATGRSGQRGSAMGAHYRHTTPEMAARAVEAIQQRLTVVLGVAEQAVESHTNRSTLRVF*
Ga0075418_107399061	3300009100	Populus Rhizosphere	AGIPARVIDELMGHASSSGHLRGSAIGAHYRHTTPEMAARVVDAMQQRLTVVLGVAELAIERHPNRSTLRVF*
Ga0075418_115973751	3300009100	Populus Rhizosphere	IPARVIDELMGHQPSSRGGHLRGSAIGAHYRHTTPEMAARAVEAIQQRLAVVLEVAEVAVERHPNRSTLKVF*
Ga0114129_103612051	3300009147	Populus Rhizosphere	FRHTYATWLEDAGILARVIGELMGHEATGRSGQQRGSTMGAHYRHTTPEMAARAVDAIQQRLTVVLQVAERTVQSYPSRSALSVF*
Ga0114129_112897541	3300009147	Populus Rhizosphere	PARVIDELMGHQPSSRGGHLRGSAIGAHYRHTTPEMAARAVEAIQQRLTVVLGAAELAVERHPNRSTLSVF*
Ga0114129_114944681	3300009147	Populus Rhizosphere	HTYATWLEDIGIPARVIDELMGHQAGSRSGLRGSAIGAHYRHTTPDMATRAVEAIQQRLTVVLGVAELAVERHPNRSTLRVF*
Ga0111538_128697591	3300009156	Populus Rhizosphere	ASSSGHLRGSAIGAHYRHTTPEMAARVVEAIQQRLAVVLGVAELAVERHPARSTLRVF*
Ga0111538_139439671	3300009156	Populus Rhizosphere	EVMGHEATSRAGQQRGSAMGAHYRHTTPEMATRIATAIEQRLTVVLEVAEQALEAHPSRSTQRVF*
Ga0126307_100319286	3300009789	Serpentine Soil	VIDEVMGHEATSRGGQQRGSAMGAHYRHTTREMAARIAAAIEQRLMVVLEVAEQVLESHSNRSSQRVF*
Ga0126307_104193092	3300009789	Serpentine Soil	ELMGHQASSRGGHLGGSAIGAHYRHTTPEMAARVVDAIQQRLTVVLAVAELTVERHPNRSTLRVF*
Ga0105084_10518671	3300009811	Groundwater Sand	TWLEDAGIPARVIDELMGHEATGRSGQRGSAMGAHYRHTTPEMAARAVDAIQQRLTVVLGVAELAVESHPNRSTLRAF*
Ga0105084_11095641	3300009811	Groundwater Sand	HTFATWLEDAGIPARVIDELMGHEASTRGAQHLGSTMGAHYRHTTPEMAARVAAAIQARLAVVVATAEETVEAHPNRVPRHVF*
Ga0105076_10600041	3300009816	Groundwater Sand	ARVIDELMGHEATGRTGQQGSAMGTHYRHTTPEMAARVTAAIQQRLTVVLQVAEQTLENHTNRAALRVF*
Ga0126313_100334245	3300009840	Serpentine Soil	ATWLEDAGIPARVIDELMGHEPSTRGAQHLGSTKGAHYRHTTPEMATRVVMAIQDRLAVVVSVAEHVVEAQPSRVPRNVF*
Ga0126313_100677032	3300009840	Serpentine Soil	VIDELMGHQASSRGGHLRGSAIGAHYRHTTPEMAARVVEAIQQRLTVVLGVAELAVERHPNRSTLTVF*
Ga0126313_100827854	3300009840	Serpentine Soil	VIDELMGHQASSRGRLGGSAIGAHYRHTTPEMAARVVEAIQQRLTVVLAVAELTVERHPNRSTLRVF*
Ga0126313_102006432	3300009840	Serpentine Soil	VIDELMGHHASSRGGLGGSAIGAHYRHTTPEMAARVVDAIEQRLAVVLGVAELGIERHPNRSALRVF*
Ga0126313_102972331	3300009840	Serpentine Soil	MGHEATSRTGQQRGSAMGAHYRHTTPEMATRVVEAIQQRLTIVLHVAEESLENNRTG*
Ga0126313_107655183	3300009840	Serpentine Soil	VIDELMGHEASTRGAQHLGSTMGAHYRHTTPEMATRVVMAIQTRLAVVVGVAEQVVEAQPTRVPR
Ga0126313_113493931	3300009840	Serpentine Soil	ATWLEDAGIPTRVIDELMGHEATGRSGQRGSAMGAHYRHTTPEMAARAVDAIQQRLTVVLGVAEQAVESHPNRSTLRVY*
Ga0126304_103051681	3300010037	Serpentine Soil	RVIDEVMGHEASSRTGQQRGSVMGAHYRHTTREMAARIATAIEQRLTVVLEVAEQVLESHPTRSTQGVF*
Ga0126304_112381992	3300010037	Serpentine Soil	VIDEVMGHEATSRGGQQRGSAMGAHYRHTTREMAARIAAAIEQRLMVVLEVAEQVLESHSNRSSQ
Ga0126315_105699011	3300010038	Serpentine Soil	TWLEDAGIPARVIDEVMGHEATSRAGQQRGSAMGAHYRHTTPEMAARIAAAIEQRLTVVLEAAEQALEAQPSRSSQRVF*
Ga0126309_100823881	3300010039	Serpentine Soil	EATSRAGQQRGSAMGAHYRHTTPEMAARIAAAIEQRLTVVLRIAEQALEAQPRRSTQRVF
Ga0126308_110453421	3300010040	Serpentine Soil	GIPARVIDELMGHQASSRGGHLRGSAIGAHYRHTTPEMAARVVEAIQQRLTVVLGVAELAVERHPNRSTLTVF*
Ga0126308_113261582	3300010040	Serpentine Soil	MGHQASSRGGHLRGSAIGAHYRHTTPEMAARVVDAIQQRLTVVLEVAELAVERHANQSTLRVF*
Ga0126312_100113171	3300010041	Serpentine Soil	ATWLEDAGIPARVIDELMGHQASSRGGHLGGSAIGVHYRHTTPEMAARVVEAIQQRLTVVLGVAEVTVESYPDRSTLSVF*
Ga0126312_100282852	3300010041	Serpentine Soil	VIDELMGHASSRGHLRGSAIGAHYRHTTPEMAARVVEAIQQRLTVVLEVAELAVERHPDRSTFRVF*
Ga0126312_100626242	3300010041	Serpentine Soil	MGHEATGRSGQRGSAMGAHYRHTTPEMAMRAIDAINRRLTVVLGVAEQALERYPNRLAPRVF*
Ga0126312_101631202	3300010041	Serpentine Soil	GIPARVIDEVMGHEATSRTGQQRGSAMGAHYRHTTPEMAARIATAIEPRLTVVLKVAEQALEIQPNRSTQRVF*
Ga0126312_108811791	3300010041	Serpentine Soil	IDELMGHESTGRAGQQRGSAMGAHYRHTIPEMAARIATAIEQRLTVVLKVAEQALEGHPNHSTHRVF*
Ga0126312_109434641	3300010041	Serpentine Soil	TFATWLEDAGIPARVIDEVMGHEATSRTGQQRGSAMGAHYRHTTPEMAARAVDTIQQRLTIVLKVAEQTLESNSNRSAPRVF*
Ga0126314_108546621	3300010042	Serpentine Soil	MGHQASSRGRLGGSAIGAHYRHTTPEMAARVIEAIQLRLTVVLAVAELTVERHPNRSTLRVF*
Ga0126310_108783481	3300010044	Serpentine Soil	SRAGQQRGSAMGAHYRHTTPEMAARIATAIEQRLTVVLRVAEQALEAQPSRSTQRVF*
Ga0126311_109355691	3300010045	Serpentine Soil	MGHEATSRGGQQRGSAMGAHYRHTTPEMAARIATAIEQRLTVVLEAAEQALEAKPNRSTRRVF*
Ga0126321_10756914	3300010145	Soil	VTDEVMGHEATSRVSQQRGSAMGAHYRHTTPEMAARIATAIQQRLRLVLEVAEQAVESHPSRSTQ*
Ga0126306_109017581	3300010166	Serpentine Soil	VIDELMGHEASTRGAQHLGSTMGAHYRHTTPEMATRVVMAIETRLAVVVGVAEQVVETQPTQMPRNVF*
Ga0138513_1000114581	3300011000	Soil	MGHEATGRTGQHQGSAMGAHYRHTTPEMAMRVIDSIDRRLTVVLGVAEQALEHYPNRSPRVF*
Ga0137376_116835161	3300012208	Vadose Zone Soil	TWLEDAGIPARVIDELMGHEASTRGAQHLGSTIGAHYRHTTPEMATRVVTAIQDRLSVAVSVAEQVVEAQPTRVPRNVF*
Ga0137369_102817032	3300012355	Vadose Zone Soil	EDAGIPARVIDELMGHEATGRTGQHQGSAMGAHYRHTTPEMAARVVTAIETRLAVVLRIAEEAVETHPNRSAHRMF*
Ga0137368_109134741	3300012358	Vadose Zone Soil	RTRQQRGSAMGAHYRHTTPEMAARVTAAVQERLTVVLQVAEQTLEISPNRAALRVS*
Ga0137375_102812111	3300012360	Vadose Zone Soil	VIDELMGHEATGRSSQHQGSAMGAHYRHTTPEMAVRVIDAIERRLTVVLHTAEQTLENCPNRSTPRVF*
Ga0162651_1000093204	3300012938	Soil	LEDAGIPARVIDELMGHEASTRGAQHLGSTMGAHYRHITPEMATRVVMAIQDRLAVVVSVAEQVVEAQPTRVPRNVL*
Ga0182000_105614972	3300014487	Soil	VIDELMGHEATGRSRQHQGSAMGAHYRHTTPEMGMRVIDSIDRRLAVVLGVAEQALEQFPNRLTPSVF*
Ga0190266_110183072	3300017965	Soil	ATWLEDDGIPARVIDELMGHEATGRAGPGLSSAMGAHYRHTTPEMAARVITAIEARLAVVLSVAEGALETRRTRSFTSVF
Ga0184605_101405151	3300018027	Groundwater Sediment	PARVIDEVMGHEATSRTGQQRGSAMGAHYRHTTPEMAARIATAIEQRLTVVLKVAEQVLESHPYRSTQRVF
Ga0184621_100192141	3300018054	Groundwater Sediment	EATGRSRQHQGSAMGAHYRHTTPEMAARAVEAIQQRLTIVLEVAELTVERHPNRSTLRVF
Ga0184621_102996192	3300018054	Groundwater Sediment	EDAGIPARIIDELMGHEATGRGDQGLSSAMGAHYRHTTPEMATRVITAIEARLAVVLSVAEKALEIRRTRSFTSMF
Ga0184624_102572732	3300018073	Groundwater Sediment	IPARVIDELMGHQASSRGQLRGSAIGAHYRHTTPEMAARVVEAIQQRLMVVLGVAELAVERHPNRSTLRVF
Ga0184612_101024592	3300018078	Groundwater Sediment	HTYATWLEEDGIPARVIDELMGHRAGSRGNLEDSAIGRHYRHTTPETHARVVAALEERLIIMLRVAEKLAWT
Ga0184625_101905581	3300018081	Groundwater Sediment	AGQQRGSAMGAHYQHTTPEMAARIAAAIEQRLTVVLRVAEQALEAQPSRSSQRVF
Ga0190269_106355041	3300018465	Soil	QVIDEVMGHEATRRAGQQRGSAMGAHYRHTTAEMAARIATTIEQRLTVVLEVAEQAIEAHPNRSTRRVF
Ga0190268_119450071	3300018466	Soil	MSYCRPAAGQRHGRAHYRHTTPEMAARIATAVEQRLTVVLEVAEQTLEAQPRRSTQRVF
Ga0190270_131865582	3300018469	Soil	AGIPARVIDELMGPQASSRGGQHQGSAIGAHYRHTTPEMAARAVKAIQQRLTVMLEVAELGVESDPNRSTLRVF
Ga0190274_104825482	3300018476	Soil	MGHEATGRSGQQRGSAMGAHYRHTTPEMAARVVEAIQQRLTIVLHVAAESLENNPNRLAPGVF
Ga0190267_113043181	3300019767	Soil	FATWLEDAGIPARVIDELMGHEATSRSGQHQGSAMGAHYRHTTPEMAARVVDAIQQRLTIVLHVAAESLENNPNRLAPGVF
Ga0193705_10234402	3300019869	Soil	MGHEATGRGDQGLSSAMGAHYRHTTPEMATRVITAIEARLAVVLSVAEKALEIRRTRSFTSMF
Ga0210382_105640792	3300021080	Groundwater Sediment	MGHEATSRVGQQRGSAMGAHYRHTTPEMAARIATAIERRLTVVLKVAEQALEARPNRSTQRVF
Ga0224452_12258321	3300022534	Groundwater Sediment	GPRSDRSQPPEQRGSAMGAQYRHTTPEMAARALDAIQQRLTVVLHVAERAVESYPNQSTLRVF
Ga0222623_100515441	3300022694	Groundwater Sediment	VMGHEATSRAGQQRGRAMGAHYRHTTPEMAGRIATAIEQRLTVVLKVAEQALEAHPNRSTQRVF
Ga0222623_103345891	3300022694	Groundwater Sediment	WLEDAGIPARVIDELMGHQASSRGGHLHGTAIGAHYRHTTPEMAVRAVDAMQQRLTVVLGVAELTVERHPNRSTLRVF
Ga0222622_112735151	3300022756	Groundwater Sediment	TDPTSRAGQQRGSAMGAHYRHTTPEMAARVVAAIQQRLTIALGVAELAVERQPNRSTLRV
Ga0209842_10081302	3300027379	Groundwater Sand	LDLHGPPDLRHTFATWQEDAGIPARVIDELMGHQASGRSGRHRGSAIGAHYRHTTPEMAARVIAAVEERLVVVLATAEATRDQQPW
Ga0209899_10153981	3300027490	Groundwater Sand	DLDGLDLHGPPDLRHTFATWQEDAGIPARVIDELMGHQASGRSGRHRGSAIGAHYRHTTPEMAARVIAAVEERLVVVLATAEATRDQQPW
Ga0209874_10637761	3300027577	Groundwater Sand	VMGHEATSRTGQQRGSAMGAHYRHTTPEMAGRIATAIEQRLRLVLEVAEQGLETYLSRSTQRVF
Ga0209795_101129312	3300027718	Agave	AGIPARVIDEVMGHEATGRRGQQRGSAMGAHYRHTTPEMGMRVIDSIDRRLAVVLGVAEQALEQFPNRLTPRVF
Ga0209814_101762862	3300027873	Populus Rhizosphere	IPTRVIDELMGHQAGSRGGHLRGSAIGAHYRHTTPEMAARVVDAIQQRLTVVLGVAERAVERHPNRSTLSVF
Ga0307321_11439991	3300028704	Soil	RIIDELMGHEATGRGDQGLSSAMGAHYRHTTPEMATRVITAIEARLAVVLSVAEKALEIRRTRSFTSMF
Ga0307291_10464673	3300028707	Soil	MGHEATSRAGQQRGSAMGAHYRHTTPEMATRVITAIEARLAVVLSVAEKALEIRRTRSFTSMF
Ga0307295_100228171	3300028708	Soil	DELMGHEATGRGDQGLSSAMGAHYRHTTPEMATRVITAIEARLAVVLSVAEKALEIRRTRSFTSMF
Ga0307285_100239461	3300028712	Soil	LHGAHHLCHTYTTWLEDAGIPARVIDELMGHQASSRGGHLGGSAIGAHYRHTTPKMAARVVEAIQQRLTVVLGVAELAVERHPNRSTLRVS
Ga0307285_100252673	3300028712	Soil	IPARVIDEVMGHEATSRVGQQRGSAMGAHYRHTTPEMAARIATAIERRLTVVLKVAEQALEARPNRSTQRVF
Ga0307285_100310632	3300028712	Soil	RHTFATWLEDAGIPARIIDELMGHEATGRGDQGLSSAMGAHYRHTTPEMATRVITAIEARLAVVLSVAEKALEIRRTRSFTSMF
Ga0307285_100374141	3300028712	Soil	VRESGSTYASWLEDAGIPARVIDELMGHQASSRGGHLRGSAIGAHYRHTTPEMAGRVVEAIQQRLTVVLEVAELAIERHPNRSTLTVF
Ga0307309_101512061	3300028714	Soil	TYATWLEDAGIPARVIDELMGHEATGRSGQQRGSAMGAHYRHTTPEMAARVVEAIQQRLTVALGVAELAVERHPNRSTLRVF
Ga0307313_101029701	3300028715	Soil	EATSRTGQHRGSAMGAHYRHTTPEMAARVIDAVQERLAIVLRVAEESLENNPNRSAPGVF
Ga0307311_102619991	3300028716	Soil	AGIPARIIDELMGHEATGRGDQGLSSAMGAHYRHTTPEMATRVITAIEARLAVVLSVAEKALEIRRTRSFTSMF
Ga0307301_100330241	3300028719	Soil	MGHEATSRAGQQRGSAMGAHYRHTTPEMATRVITAIEARLAVVLSVAEKALEIRRTRS
Ga0307301_101408071	3300028719	Soil	GHEATGRSGQQRGSAMGAHYRHTTPEMAARVIDAIQQRLTIVLQVADESLESHPNRLARGVF
Ga0307317_102806351	3300028720	Soil	IPARVIDEVMGHEATSRTGQRGSVMGAHYRHTTTEMAGRVAAAVQERLMVVLQVAEQALETHPSRAKLGVQ
Ga0307319_100264784	3300028722	Soil	SGSTYASWLEDAGIPARVIDELMGHQASSRGGHLRGSAIGAHYRHTTPEMAGRVVEAIQQRLTVVLEVAELAIERHPNRSTLTVF
Ga0307319_102063601	3300028722	Soil	VRSNQSCSEPPACSDGSAWYTAGAWLEDAGIPARVIDEVMGHEATSRGGQLRGSAMGAHYRHTTPEMAGRITPAIQQRLTIVLEMAEQALGAPPNRSTRRVF
Ga0307318_100021644	3300028744	Soil	VTGLCGRPSVRESGSTYASWLEDAGIPARVIDELMGHQASSRGGHLRGSAIGAHYRHTTPEMAGRVVEAIQQRLTVVLEVAELAIERHPNRSTLTVF
Ga0307318_100828101	3300028744	Soil	WLEDAGIPARVIDELMGHEASTRGAQHLGSTMGAHYRHTTPEMATRVVTAIQTRLAVAVSVAEQVVEAQPTQVPRNVF
Ga0307318_101578761	3300028744	Soil	MGHEATGRSRQHQGAMGAHYRHTTPEVAARALDAIQQRLTVVLHVAERAVDSYPNRAALRVF
Ga0307318_101825681	3300028744	Soil	TYATWLEDAGIPARVIDELMGHQASSRGGHLRGSAMGAHYRHTTPEMAARVVAAIHQRLTVVLEVAELAVERQPNRSTLRVF
Ga0307318_103089831	3300028744	Soil	SFATWLEDAGIPARVIDELMGHEASTRGAQHLASTMGAHYRHTTPEMATRVVMAIQDRLAVVVSMAEQVVEAQPTQVPRSMF
Ga0307288_104636051	3300028778	Soil	IPARVIDELMGHGATSRSGQHQGSAMGAHYRHTTPEMAARVVDAIQQRLTIVLQVAEESLENHPNRSTLRVF
Ga0307323_100086354	3300028787	Soil	AGIPARVIDELMGHEATGRSGQHQGSAMGAHYRHTTPEMAARVVDAIQQRLTIVLQVADESLESHPNRLARGVF
Ga0307290_102118421	3300028791	Soil	YASWLEDAGIPARVIDELMGHQASSRGGHLRGSAIGAHYRHTTPEMAGRVVEAIQQRLTVVLEVAELAIERHPNRSTLTVF
Ga0307287_100684631	3300028796	Soil	ELMGHEAASRTGQHRGSAMGAHYRHTTPEMAARVVDAIQQRLTIVLQVAEESLENHPNRSAPGVF
Ga0307302_102824041	3300028814	Soil	DEVMGHEATSRTGQQRGSAMGAHYRHTIPEMAGRIATAIEQRLTVVLKVAEQALEAHPSRSTQRVF
Ga0307302_103421863	3300028814	Soil	GRPSVRESGSTYASWLEDAGIPARVIDELMGHQASSRGGHLRGSAIGAHYRHTTPEMAGRVVEAIQQRLTVVLEVAELAIERHPNRSTLTVF
Ga0307302_104277772	3300028814	Soil	WLEDAGIPARVIDELMGHQASSRGGHLRGSAMGAHYRHTTPEMAARVVAAIHQRLTVVLEVAELAVERQPNRSTLRVF
Ga0307302_104735501	3300028814	Soil	DAGIPARVIDELMGHQASSRGGHLHGTAIGAHYRHTTPEMAARAVDAMQQRLTVVLGVAELTVERHPNRSTLRVF
Ga0307302_106482871	3300028814	Soil	EDAGIPARVIDELMGHEASTRGAQHLGSTMGAHYRHTTPEMAGRIATAIQARLEVVVRTAEEMLAAYSTRVPRRVF
Ga0307296_103045602	3300028819	Soil	LMGHEATGRSGQQRGSAMGAHYRHTTPEMAARVIDAIQQRLTIVLQVADESLESHPNRLARGVF
Ga0307296_108374411	3300028819	Soil	LMGHQASSRGGLRGSAIGAHYRHTTPEMAARVVEAIQQRLTVVLQVAERSLERYPIRPALRVF
Ga0307312_108530491	3300028828	Soil	LEDAGIPARIIDELMGHEATGRGDQGLSSAMGAHYRHTTPEMATRVITAIEARLAVVLSVAEKALEIRRTRSFTSMF
Ga0307289_101289022	3300028875	Soil	ATGRSGQQRGSAMGAHYRHTTPEMAARAVDAIQQRLTIVLQVADESLESHPNRLARGVF
Ga0307286_101402422	3300028876	Soil	HEATGRSRQHQGSAMGAHYRHTTPEIAARAADAIQQRLAVVLGVAELAAESHPNRSTLRV
Ga0307286_102833123	3300028876	Soil	HSFATWLEDAGIPARVIDELMGHEASTRGAQHLGSTMGAHYRHITPEMATRVVMAIQDRLAVVVSVAEQVVEAQPTRVPRSVF
Ga0307278_100464883	3300028878	Soil	MGHEATGRGGQALGSAMGAHYRHTTPELATRVITAIEARLAVVLSVAEETLETRRTRSLSRML
Ga0307300_100761902	3300028880	Soil	VIDELMGHEATGRSGRQQGSAMGIHYRHTTPEMAGRVIDAIQQRLTIVLRVAEKALEGHPNRSGLRVF
Ga0307300_101000483	3300028880	Soil	VMGHEATSRVGQQRGSAMGAHYRHTTPEMAARIATAIERRLTVVLKVAEQALEARPNRSTQRVF
Ga0307304_102080211	3300028885	Soil	HTDATWLEDAGIPARVIDELMGHEATGRSGQQRGSAMGAHYRHTTPEMAARVVEAIQQRLTVALGVAELAVERHPNRSTLRVF
Ga0307304_102504031	3300028885	Soil	HEATSRVGQQRGSAMGAHYRHTTPEMAARIATAIERRLTVVLKVAEQALEARPNRSTQRV
Ga0307408_1006264952	3300031548	Rhizosphere	MGHHASSRGGLGGSAIGAHYRHTTPEMAARVVDAIEQRLAVVLGVAELGIERHPNRSALRVF
Ga0307405_100871221	3300031731	Rhizosphere	VIDELMGHQASSRGRLGGSAIGAHYRHTTPEMAARVVEAIQQRLTVVLAVAELTVERHPNRSTLRVF
Ga0307405_101378973	3300031731	Rhizosphere	GIPARVIDELMGHQASSRGGHLGGSAIGVHYRHTTPEMAARVVEAIQQRLTVVLGVAEVTVESYPDRSTLSVF
Ga0307405_107255492	3300031731	Rhizosphere	WLEDAGIPARVIDELMGHEATDRSRQHQGSAMGVHYRHTTPEMAARVTAAIQQRLTVVLQGAEQAIENHPNRSGARMF
Ga0307405_108720781	3300031731	Rhizosphere	SGCARHEATSRVGQQRGRAMGARIATAIVQRLTVVLEVAEQALEAHPNRSPLRVF
Ga0307413_100279184	3300031824	Rhizosphere	MGHEATGRSRQHQGNAMGAHYRHTTPEMAMRAIDAINRRLTVVLGVAEQALERYPNRLGSRLGIRIA
Ga0307413_115633642	3300031824	Rhizosphere	MGHEASGRGQHLGSAMGTHYRHTTPEMAARVVEAIQQRLEIVLEVAEQTLEGNSNQSTLSLDSPTR
Ga0307413_119186582	3300031824	Rhizosphere	AGQQRGSAMGAHYRHTTPEMAARVVEAIQQRLTIVLHVADESLENNPNRLAPGVF
Ga0307410_100459293	3300031852	Rhizosphere	VIDELMGHASSRGHLRGSAIGAHYRHTTPEMAARVVEAIQQRLTVVLEVAELAVERHPDRSTFRVF
Ga0307410_107338162	3300031852	Rhizosphere	FRHTFASWLEDAGIPARVIDEVMGHEATSRTGQRGSAMGAHYRHTTTEMAGRVAAAVQERLMVVLLVAEQALESSPDWATRRML
Ga0307406_100900443	3300031901	Rhizosphere	VIDELMGHQASSRGRLGGSAIGAHYRHTTPEMAARVVEAIQQRLTVVLAVAELAVERHPNRSTLRVF
Ga0307406_102024931	3300031901	Rhizosphere	MGHEATSRGGQQRGSAMGAHYRHTTPEMAARVVAAVEQRLTVVLKVAEQALEAHQPTQRAECSSATGR
Ga0307406_110151432	3300031901	Rhizosphere	TWLEDAGIPARVIDELMGHEATDRSRQHQGSAMGVHYRHTTPEMAARVTAAIQQRLTVVLQGAEQAIENHPNRSGARMF
Ga0307406_117882551	3300031901	Rhizosphere	WLEDAGVPARVIDEVMGHEATSRAGQQRGSAMGAHYRHTTPEMAARVVEAIQQRLTIVLHVADESLENNPNRLAPGVF
Ga0307407_108818672	3300031903	Rhizosphere	MGHEATSRGGQQRGSAMGAHYRHTTPEMAARVVAAVEQRLTVVLKVAEQALEAHQPTQRAECSSATGRVPWQISGK
Ga0307407_111773141	3300031903	Rhizosphere	MGHEASTRGVQHLGSTMGAHYRHTTPEMATRVVMAIQDRLVVVVSVAEQVVEAQPTRVPRNVF
Ga0307412_101527111	3300031911	Rhizosphere	DAGIPARVIDELMGHQASSRGGHLRGSAIGAHYRHTTPEMAVRVVEAIQERLMVVLRVAELAVECHPNRSTLRVF
Ga0307412_108687282	3300031911	Rhizosphere	VIDELMGHQASSRGGHLRGSAIGAHYRHTTPEMAARVVEAIQQRLTVVLGVAELAVERHPNRSTLTVF
Ga0307409_1005161231	3300031995	Rhizosphere	DEVMGHEATSRVGQQRGSAMGAHYRHTTPEMAARVVEAIQQRLTIVLHVADESLENNPNRLAPGVF
Ga0307416_1000074573	3300032002	Rhizosphere	MGHEATSRSGQRGSAMGAHYRHTTPEMAARAVDAIQQRLTVVLGVAEQAVERHPNRSTLRVF
Ga0307416_1008251312	3300032002	Rhizosphere	PARVIDEVMGHEATSRTGQRGSAMGAHYRHTTTEMAGRVAAAVQERLMVVLLVAEQALESSPDWATRRML
Ga0307416_1023810902	3300032002	Rhizosphere	HTYATWLEDTGIPARVIDELMGHQASSRGGHLRGSAIGAHYRHTTPEMAARAVEAMQQRLTVVLGVAELTVERHPDRSTLRVF
Ga0307414_100389694	3300032004	Rhizosphere	TSRSGQRGSAMGAHYRHTTPEMAARAVDAIQQRLTVVLGVAEQAVERHPNRSTLRVF
Ga0307415_1008472162	3300032126	Rhizosphere	MGHEATSRGGQQRGSAMGAHYRHTTPEMAARIATAIQQRLTVVLEAAEQVLEALPNRLARRVF
Ga0307415_1018556361	3300032126	Rhizosphere	MGHEASTRGVQHLGSTMGAHYRHTTPEMATRVVMAIQDRLAVAVSVAEQVVEAQPTRVPRNVF
Ga0268251_100267202	3300032159	Agave	VIDELMGHEPSTRGAQHLGSTMGAHYRHTTPEMATRVVMAIQDRLAVVVSVAEQVVEAQPTRMPRNVF
Ga0268251_102908651	3300032159	Agave	ARVIDEVMGHEATSRVSQQRGSAMGAHYRHTTPEMAARISTAIEQRLKVVLEVAEQALESHPSRSTRRVF
Ga0268251_105326721	3300032159	Agave	YATWLEDAGIPARVIDELMGHQASSRGGHLGGSAIGAHYRHTTPEMAARVVEAMQQRLTVVVGVAELAVERHPNRSALRLF
Ga0247830_104145081	3300033551	Soil	IDELMGHASSSGHLRGSAIGAHYRHTTPEMAARVVDAMQQRLTVVLGVAELAIERHPNRSTLRVF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040519

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences