NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F040312

Metagenome / Metatranscriptome Family F040312

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F040312
Family Type Metagenome / Metatranscriptome
Number of Sequences 162
Average Sequence Length 44 residues
Representative Sequence ARTAAWRGARASKLCIFNFVIVVLSFTVVNLYLSQSHRYF
Number of Associated Samples 141
Number of Associated Scaffolds 162

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 88.27 %
Associated GOLD sequencing projects 132
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (99.383 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(19.753 % of family members)
Environment Ontology (ENVO) Unclassified
(25.309 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.383 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 51.47%    β-sheet: 0.00%    Coil/Unstructured: 48.53%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 162 Family Scaffolds
PF05201GlutR_N 80.25
PF01379Porphobil_deam 7.41
PF02602HEM4 2.47
PF00202Aminotran_3 1.23
PF03900Porphobil_deamC 1.23
PF01488Shikimate_DH 1.23
PF00697PRAI 0.62
PF07715Plug 0.62
PF13751DDE_Tnp_1_6 0.62
PF00490ALAD 0.62
PF16576HlyD_D23 0.62

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 162 Family Scaffolds
COG0373Glutamyl-tRNA reductaseCoenzyme transport and metabolism [H] 80.25
COG0181Porphobilinogen deaminaseCoenzyme transport and metabolism [H] 8.64
COG1587Uroporphyrinogen-III synthaseCoenzyme transport and metabolism [H] 2.47
COG0113Delta-aminolevulinic acid dehydratase, porphobilinogen synthaseCoenzyme transport and metabolism [H] 0.62
COG0135Phosphoribosylanthranilate isomeraseAmino acid transport and metabolism [E] 0.62


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.38 %
UnclassifiedrootN/A0.62 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2088090014|GPIPI_16603453All Organisms → cellular organisms → Bacteria2011Open in IMG/M
3300000721|JGI12410J11868_105001All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300000912|JGI12032J12867_1013608All Organisms → cellular organisms → Bacteria → Proteobacteria521Open in IMG/M
3300001471|JGI12712J15308_10072702All Organisms → cellular organisms → Bacteria → Proteobacteria870Open in IMG/M
3300002562|JGI25382J37095_10092102All Organisms → cellular organisms → Bacteria1091Open in IMG/M
3300002886|JGI25612J43240_1063971All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300002917|JGI25616J43925_10069553All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1490Open in IMG/M
3300003219|JGI26341J46601_10142242All Organisms → cellular organisms → Bacteria → Proteobacteria674Open in IMG/M
3300004080|Ga0062385_10516680All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300004152|Ga0062386_100785159All Organisms → cellular organisms → Bacteria → Proteobacteria784Open in IMG/M
3300004635|Ga0062388_101418932All Organisms → cellular organisms → Bacteria698Open in IMG/M
3300005434|Ga0070709_10086174All Organisms → cellular organisms → Bacteria2061Open in IMG/M
3300005445|Ga0070708_101960074All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300005542|Ga0070732_10896100All Organisms → cellular organisms → Bacteria → Proteobacteria542Open in IMG/M
3300005555|Ga0066692_10798864All Organisms → cellular organisms → Bacteria → Proteobacteria580Open in IMG/M
3300005557|Ga0066704_10955921All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300005921|Ga0070766_10550187All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300005952|Ga0080026_10198962All Organisms → cellular organisms → Bacteria → Proteobacteria593Open in IMG/M
3300006102|Ga0075015_100613322All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300006172|Ga0075018_10151783All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1069Open in IMG/M
3300006176|Ga0070765_101231850All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300006804|Ga0079221_10025320All Organisms → cellular organisms → Bacteria2460Open in IMG/M
3300006806|Ga0079220_11281360All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300006903|Ga0075426_10629928All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300009088|Ga0099830_10583316All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300009089|Ga0099828_10148880All Organisms → cellular organisms → Bacteria2067Open in IMG/M
3300009089|Ga0099828_11847446All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300009101|Ga0105247_10117353All Organisms → cellular organisms → Bacteria1720Open in IMG/M
3300009698|Ga0116216_10599466All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300009760|Ga0116131_1033763All Organisms → cellular organisms → Bacteria1741Open in IMG/M
3300010048|Ga0126373_10250363All Organisms → cellular organisms → Bacteria1743Open in IMG/M
3300010333|Ga0134080_10614687All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300010359|Ga0126376_10340741All Organisms → cellular organisms → Bacteria1324Open in IMG/M
3300010360|Ga0126372_11754555All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300010360|Ga0126372_11765384All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300010361|Ga0126378_11211674All Organisms → cellular organisms → Bacteria852Open in IMG/M
3300010376|Ga0126381_103584323All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300011120|Ga0150983_14825340All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300011271|Ga0137393_11504335All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300012096|Ga0137389_11153062All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300012096|Ga0137389_11202089All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300012189|Ga0137388_10428450All Organisms → cellular organisms → Bacteria1226Open in IMG/M
3300012200|Ga0137382_11317892All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300012203|Ga0137399_10124793All Organisms → cellular organisms → Bacteria2028Open in IMG/M
3300012203|Ga0137399_10248408All Organisms → cellular organisms → Bacteria1458Open in IMG/M
3300012203|Ga0137399_10802943All Organisms → cellular organisms → Bacteria792Open in IMG/M
3300012205|Ga0137362_11453250All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300012206|Ga0137380_11433535All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300012210|Ga0137378_11055607All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300012349|Ga0137387_11154109All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300012683|Ga0137398_10736934All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300012918|Ga0137396_10290619All Organisms → cellular organisms → Bacteria1208Open in IMG/M
3300012918|Ga0137396_10354406All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300012922|Ga0137394_10298588All Organisms → cellular organisms → Bacteria1377Open in IMG/M
3300012923|Ga0137359_10649043All Organisms → cellular organisms → Bacteria923Open in IMG/M
3300012925|Ga0137419_10660720All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300012925|Ga0137419_11099993All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300012929|Ga0137404_10077921All Organisms → cellular organisms → Bacteria2621Open in IMG/M
3300012929|Ga0137404_11449715All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300012930|Ga0137407_12334830All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300014495|Ga0182015_10848662All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300015053|Ga0137405_1049277All Organisms → cellular organisms → Bacteria3101Open in IMG/M
3300015197|Ga0167638_1091144All Organisms → cellular organisms → Bacteria → Acidobacteria596Open in IMG/M
3300015242|Ga0137412_10359344All Organisms → cellular organisms → Bacteria1133Open in IMG/M
3300016404|Ga0182037_11081444All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300017926|Ga0187807_1064961All Organisms → cellular organisms → Bacteria1134Open in IMG/M
3300017934|Ga0187803_10034597All Organisms → cellular organisms → Bacteria → Proteobacteria2006Open in IMG/M
3300017961|Ga0187778_10984429All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300017973|Ga0187780_10882969All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300018007|Ga0187805_10001442All Organisms → cellular organisms → Bacteria → Acidobacteria8759Open in IMG/M
3300018007|Ga0187805_10437927All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300018037|Ga0187883_10431216All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300018044|Ga0187890_10858452All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300018058|Ga0187766_10706415All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300018086|Ga0187769_10752401All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300018088|Ga0187771_11459382All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300018468|Ga0066662_10192456All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1602Open in IMG/M
3300018468|Ga0066662_11103874All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300020001|Ga0193731_1076260All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300020021|Ga0193726_1073061All Organisms → cellular organisms → Bacteria → Proteobacteria1592Open in IMG/M
3300020140|Ga0179590_1167786All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300020579|Ga0210407_11047708All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300020583|Ga0210401_10081776All Organisms → cellular organisms → Bacteria3040Open in IMG/M
3300021088|Ga0210404_10735166All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300021088|Ga0210404_10795523All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300021168|Ga0210406_10743315All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300021178|Ga0210408_10321498All Organisms → cellular organisms → Bacteria1234Open in IMG/M
3300021178|Ga0210408_10675294All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300021180|Ga0210396_10452443All Organisms → cellular organisms → Bacteria1126Open in IMG/M
3300021180|Ga0210396_10535396All Organisms → cellular organisms → Bacteria1023Open in IMG/M
3300021384|Ga0213876_10416912All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300021401|Ga0210393_10941534All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300021403|Ga0210397_10281007All Organisms → cellular organisms → Bacteria1217Open in IMG/M
3300021406|Ga0210386_11477539All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300021432|Ga0210384_10041653All Organisms → cellular organisms → Bacteria4213Open in IMG/M
3300021433|Ga0210391_10290497All Organisms → cellular organisms → Bacteria1283Open in IMG/M
3300021433|Ga0210391_10670684All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300021479|Ga0210410_10179045All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophobacterales → Syntrophaceae1896Open in IMG/M
3300021559|Ga0210409_10222270All Organisms → cellular organisms → Bacteria → Proteobacteria1715Open in IMG/M
3300023075|Ga0224520_1126629All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300024323|Ga0247666_1108098All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300024330|Ga0137417_1476252All Organisms → cellular organisms → Bacteria1983Open in IMG/M
3300025501|Ga0208563_1042207All Organisms → cellular organisms → Bacteria1018Open in IMG/M
3300025916|Ga0207663_10358202All Organisms → cellular organisms → Bacteria1106Open in IMG/M
3300025922|Ga0207646_11876057Not Available511Open in IMG/M
3300026318|Ga0209471_1213864All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300026360|Ga0257173_1023413All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300026361|Ga0257176_1052872All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300026524|Ga0209690_1214506All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300026532|Ga0209160_1357975All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300027381|Ga0208983_1053905All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300027502|Ga0209622_1027639All Organisms → cellular organisms → Bacteria1005Open in IMG/M
3300027616|Ga0209106_1130820All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300027645|Ga0209117_1089687All Organisms → cellular organisms → Bacteria851Open in IMG/M
3300027648|Ga0209420_1195227All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300027660|Ga0209736_1162530All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300027671|Ga0209588_1031228All Organisms → cellular organisms → Bacteria1704Open in IMG/M
3300027674|Ga0209118_1077857All Organisms → cellular organisms → Bacteria951Open in IMG/M
3300027725|Ga0209178_1197382All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300027765|Ga0209073_10294417All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300027767|Ga0209655_10127821All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300027824|Ga0209040_10074066All Organisms → cellular organisms → Bacteria → Proteobacteria1985Open in IMG/M
3300027846|Ga0209180_10559516All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300027867|Ga0209167_10419945All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300027875|Ga0209283_10929692All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300027898|Ga0209067_10879760All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300027898|Ga0209067_10947980All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300027905|Ga0209415_10664736All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300027908|Ga0209006_10167415All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1922Open in IMG/M
3300030019|Ga0311348_11333877All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300030737|Ga0302310_10359201All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300030991|Ga0073994_12321374All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300031057|Ga0170834_109561774All Organisms → cellular organisms → Bacteria855Open in IMG/M
3300031128|Ga0170823_15127444All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300031234|Ga0302325_12038245All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300031236|Ga0302324_103332275All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300031446|Ga0170820_13006829All Organisms → cellular organisms → Bacteria1097Open in IMG/M
3300031546|Ga0318538_10327734All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300031573|Ga0310915_10080796All Organisms → cellular organisms → Bacteria → Proteobacteria2161Open in IMG/M
3300031720|Ga0307469_10097160All Organisms → cellular organisms → Bacteria2056Open in IMG/M
3300031753|Ga0307477_10799873All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300031754|Ga0307475_10050237All Organisms → cellular organisms → Bacteria3129Open in IMG/M
3300031754|Ga0307475_10301417All Organisms → cellular organisms → Bacteria1286Open in IMG/M
3300031754|Ga0307475_10481473All Organisms → cellular organisms → Bacteria997Open in IMG/M
3300031754|Ga0307475_10912915All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300031778|Ga0318498_10239119All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300031823|Ga0307478_10016095All Organisms → cellular organisms → Bacteria5212Open in IMG/M
3300031890|Ga0306925_10178416All Organisms → cellular organisms → Bacteria → Proteobacteria2288Open in IMG/M
3300031890|Ga0306925_10490206All Organisms → cellular organisms → Bacteria1310Open in IMG/M
3300031896|Ga0318551_10859775All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300031942|Ga0310916_10572757All Organisms → cellular organisms → Bacteria960Open in IMG/M
3300031962|Ga0307479_11464003All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300032001|Ga0306922_11549417All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300032174|Ga0307470_10615372All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300032180|Ga0307471_101617801All Organisms → cellular organisms → Bacteria803Open in IMG/M
3300032205|Ga0307472_101577472All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300032261|Ga0306920_104440959All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300032770|Ga0335085_10259023All Organisms → cellular organisms → Bacteria2086Open in IMG/M
3300032897|Ga0335071_10030971All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria5322Open in IMG/M
3300032955|Ga0335076_10086836All Organisms → cellular organisms → Bacteria3062Open in IMG/M
3300032955|Ga0335076_10390045All Organisms → cellular organisms → Bacteria1277Open in IMG/M
3300032955|Ga0335076_10769446All Organisms → cellular organisms → Bacteria844Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil19.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil16.05%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil6.79%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil6.79%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil3.70%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.70%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.09%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.09%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.09%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.09%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.47%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds2.47%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.47%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.47%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.85%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.85%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.23%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland1.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.23%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.23%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.23%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.23%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.62%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.62%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.62%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.62%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.62%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.62%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.62%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.62%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.62%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.62%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2088090014Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000721Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41EnvironmentalOpen in IMG/M
3300000912Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3EnvironmentalOpen in IMG/M
3300001471Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2EnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002886Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cmEnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300003219Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3EnvironmentalOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004152Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3EnvironmentalOpen in IMG/M
3300004635Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300005952Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009760Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014495Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaGEnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015197Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017926Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2EnvironmentalOpen in IMG/M
3300017934Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300020021Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1EnvironmentalOpen in IMG/M
3300020140Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021384Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9Host-AssociatedOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300023075Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T-25EnvironmentalOpen in IMG/M
3300024323Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025501Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026360Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-BEnvironmentalOpen in IMG/M
3300026361Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-BEnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300027381Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027502Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027648Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027660Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027767Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027824Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027867Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300030019II_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300030737Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031778Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPIPI_027586002088090014SoilPGWRGARASQLCIFNFAIVIFSFTVVNLFFSRAHRYF
JGI12410J11868_10500113300000721Tropical Forest SoilVLYAIYFQLARTAAWRGARASKLCVFNFALVILSFTVVNLYLSQHHRYF*
JGI12032J12867_101360813300000912Forest SoilLLVLALYVLYFRLARTTAWRGARASKLCIFNFVIVVLSFTVVNLYLSHSHRYF*
JGI12712J15308_1007270223300001471Forest SoilLFLYLLYFQLARSTAWRGARASKLCVFNFFVVVMSFTVVNLYLSHSHRYF*
JGI25382J37095_1009210213300002562Grasslands SoilLVLALYVLYFRLAGTAAWRGARASKXCIFNFVIVVLSFTVVNLXLSHSHRYF*
JGI25612J43240_106397113300002886Grasslands SoilAYFQLARTTAWRGARASKLCVFNFVLVVLSFTVVNLYFSSHHRYF*
JGI25616J43925_1006955313300002917Grasslands SoilLYALYFRLARTTAWRGGRASKLCIFNFVIVVLSFTVVNLYLSHSHRYF*
JGI26341J46601_1014224223300003219Bog Forest SoilARTAAWRGARASKLCIFNFVIVVLSFTVVNLYLSQSHRYF*
Ga0062385_1051668023300004080Bog Forest SoilRTTAWRGARASMLCVFNFVLVVLSFTVVNLYFSQHHRYF*
Ga0062386_10078515923300004152Bog Forest SoilLVLFLYVLYLRLSRTTAWRGGRASKLCVFNFAVVVLSFTVVNLYLSHSHRYF*
Ga0062388_10141893213300004635Bog Forest SoilYFQLARSTAWRGARASRLCVFNFVLVVLSFTVVNLYFSPHHRYF*
Ga0070709_1008617433300005434Corn, Switchgrass And Miscanthus RhizosphereYFRLARTAAWRGARASRLCVFNFVLVILNFAVVNLFFSQSHRYF*
Ga0070708_10196007413300005445Corn, Switchgrass And Miscanthus RhizosphereARNPGWRGARASQLCIFNFAIVIFSFTVVNLFFSRSHRYF*
Ga0070732_1089610023300005542Surface SoilLSRTSNWRGARASRLNIFNFAVVILSFTVVNLYLSHSHRYF*
Ga0066692_1079886413300005555SoilALYALYFRLARTTAWRGARASKLCIFNFVIVVLSFTVVNLYLSHSHRYF*
Ga0066704_1095592113300005557SoilLFVLLLYALYFRLARTATWRGARASKLCIFNFVVVVLSFTVVNLYLSHSHRYF*
Ga0070766_1055018713300005921SoilWVARTAAWRGARASKLCVFNFVVVILSFTVVNFYLSQSHRYF*
Ga0080026_1019896223300005952Permafrost SoilVITLVVLFLYLLYFQLARTTAWRGARASKLCVFNFFVVVMSFTVVNLYLSHSHRYF*
Ga0075015_10061332223300006102WatershedsYFQLARTTAWRGARASKLCVFNFVLVVLSFTVVNLYFSAHHRYF*
Ga0075018_1015178313300006172WatershedsIYLRLSRTASWRGPRASRLCIFNFAVVILSFTVVNLYLSHSHRYF*
Ga0070765_10123185023300006176SoilYFQLARTASWRGARASRLCIFNFFVVVMSFTVVNLYLSQSHRYF*
Ga0079221_1002532043300006804Agricultural SoilYFRLARTASWRGARASKLCIFNFFVVVMSFTVVNLYLSQSHRYF*
Ga0079220_1128136023300006806Agricultural SoilLVLYTVYFQLAKSATWRGARASKLCIFNFAVVVMSFTVVNLYLSQSHRYF*
Ga0075426_1062992813300006903Populus RhizosphereAAYLFLARSAAWRGARASKLCVFNFLLVIFSFTAVNLFFSHAHRYF*
Ga0099830_1058331623300009088Vadose Zone SoilYFRLARTTAWRGARASKLCIFNFAVVVLSFTVVNLYLSHSHRYF*
Ga0099828_1014888033300009089Vadose Zone SoilALYAAYFQLSRTTSWRGARASRLCIFNFVIVILSFTVVNFYLSHSHRYF*
Ga0099828_1184744623300009089Vadose Zone SoilYAVYLQLSRTTRWRGARASRLNIFNFVVVILSFTVVNLYLSHSHRYF*
Ga0105247_1011735313300009101Switchgrass RhizosphereLSYAYLRLARTASWRGPRASRLCIFNFVVVILSFTVVNLYLSHSHRYF*
Ga0116216_1059946613300009698Peatlands SoilRTAAWRGARASKLCVFNFVLVVVNFWVVNLFFSQHHRYF*
Ga0116131_103376333300009760PeatlandFRLARTAAWRGARASKLCVLNFVLVVVNFWVVNLFFSQHHRYF*
Ga0126373_1025036313300010048Tropical Forest SoilRTTAWRGARASKLCVFNFVIVFLSFTVVNFYLSHSHRYF*
Ga0134080_1061468713300010333Grasslands SoilVFYLRLARNPSWRGARASQLCIFNFAIVIFSFTVVNLFFSRSHRYF*
Ga0126376_1034074123300010359Tropical Forest SoilLILYAAYFRLARTTVWRGARASKLCVFNFLIIFLSFTVVNLYLSPHHRFF*
Ga0126372_1175455523300010360Tropical Forest SoilTAWRGARASKLCVFNFVVVFLSFTVVNLYLSHSHRYF*
Ga0126372_1176538423300010360Tropical Forest SoilAWRGARASKLCVFNFILVIFSFTAVNLFFSHVHRYF*
Ga0126378_1121167413300010361Tropical Forest SoilTTAWRGARASKLCVFNFVIVFLSFTVVNFYLSHSHRYF*
Ga0126381_10358432323300010376Tropical Forest SoilLARTAVWRGARASLLCVFNFVLVVLSFTVVNLYFSQHHKYF*
Ga0150983_1482534013300011120Forest SoilRLARKTAWQGARACKLCIFNFAVVVLSFTVVNFYVSHSHRYF*
Ga0137393_1150433523300011271Vadose Zone SoilAAYLQLSRTTSWRGARASRLCIFNFVIVILSFTVVNLYLSHSHRYF*
Ga0137389_1115306223300012096Vadose Zone SoilGWRGARASQLCIFNFAIVIFSFTVVNLFFSHAHRYF*
Ga0137389_1120208913300012096Vadose Zone SoilTLLVLLLYVLYFRLARTATWRGARASKLCIFNFVVVVLSFTVVNLYLSHSHRYF*
Ga0137388_1042845023300012189Vadose Zone SoilLLLYVVYFRLARTTAWRGARASRLCVFNFVVVILSFTVVNLYLSQYHRFF*
Ga0137382_1131789223300012200Vadose Zone SoilYVSYLRLARNPSWRVARASQLCIFNFAIVIFSFTVVNLFFSHAHRYF*
Ga0137399_1012479313300012203Vadose Zone SoilLYFRLAGTAAWRGARASKLCIFNFVIVVLSFTVVNLYLSHSHRYF*
Ga0137399_1024840813300012203Vadose Zone SoilTAWRGARASKLCIFNFVIVVLSFTVVNLYLSHSHRYF*
Ga0137399_1080294323300012203Vadose Zone SoilLAKTATWRGARASKLCIFNFVVVVLSFTVVNLYLSHSHRYF*
Ga0137362_1145325013300012205Vadose Zone SoilVVYFRLARTTAWRGARASRLCIFNFVVVVLSFTVVNLYLSHSHRYF*
Ga0137380_1143353523300012206Vadose Zone SoilAWRGARASKLCIFNFVVVVLSFTVVNLYLSHSHRYF*
Ga0137378_1105560723300012210Vadose Zone SoilYVAYFRLARTTAWRGARASKLCIFNFVVVVLSFTVVNLYLSHSHRYF*
Ga0137387_1115410923300012349Vadose Zone SoilVVTLLVLLLYVLYFRLARTATWRGARASKLCIFNFVVVVLSFTVVNLYLSHSHRYF*
Ga0137398_1073693413300012683Vadose Zone SoilAYLQLSRTTTWRGARASRLCIFNFVIVVLSFTVVNLYLSHSHRYF*
Ga0137396_1029061923300012918Vadose Zone SoilLLYVLYFRLARTATWRGARASKLCIFNFVVVVLSFTVVNLYLSHSHRYF*
Ga0137396_1035440623300012918Vadose Zone SoilTLFVLLLYVLYFRLAKTATWRGARASKLCIFNFVVVVLSFTVVNLYLSHSHRYF*
Ga0137394_1029858823300012922Vadose Zone SoilVLLLYVLYFRLAKAAAWRGARASKLCIFNFVIVVLSFTVVNLYLSHSHRYF*
Ga0137359_1064904323300012923Vadose Zone SoilWRGARASQLCIFNFAIVIFSFTVVNLFFSRSHRYF*
Ga0137419_1066072013300012925Vadose Zone SoilLSRTTSWRGARASRLCIFNFVIVILSFTVVNLYLSHSHRYF*
Ga0137419_1109999313300012925Vadose Zone SoilYVVTLLVLLLYLLYFRLARTTTWRGARASKLCIFNFVVVVLSFTVVNLYLAHSHRYI*
Ga0137404_1007792113300012929Vadose Zone SoilYFRLAGTAAWRGARASKLCIFNFVIVVLSFTVVNLYLSHSHRYF*
Ga0137404_1144971523300012929Vadose Zone SoilVTLFVLLLYVLYFRLARTATWRGARASKLCIFNFVVVVLSFTVVNLYLSHSHRYF*
Ga0137407_1233483013300012930Vadose Zone SoilRNPSWRGARASQLCIFNFAIVIFSFTVVNLFFSHAHRYF*
Ga0182015_1084866213300014495PalsaTTWRGARASRLCIFNFVIVVLSFTVVNLYLSHSHRYF*
Ga0137405_104927713300015053Vadose Zone SoilAAGIGVVRALLYALYFRLAGTAAWRGARASKLCIFNFVIVVLSFTVVNLYLSHSHRYF*
Ga0167638_109114413300015197Glacier Forefield SoilYLLYFQLARTTAWRGARASKLCVFNFFVVVLSFTVVNLYLSHSHRYF*
Ga0137412_1035934413300015242Vadose Zone SoilLARTTAWRGARASKLCVFNFFVVVLSFTVVNLYLSHSHRYF*
Ga0182037_1108144413300016404SoilTAAWRGARASKLCVFNFVLVVLSFTVVNLYFSQHHRYF
Ga0187807_106496123300017926Freshwater SedimentYFQLARTTAWRGARASKLCVFNFVLVILSFTVVNLYFSQHHRYF
Ga0187803_1003459713300017934Freshwater SedimentAVYAVYLLLSRTASWRGARASVLCVLSFVLVVLSFTVVNVYLSRSHRFF
Ga0187778_1098442923300017961Tropical PeatlandAAWRGARASKLCVFNFVLVVLSFTVVNLYLSPHHRYF
Ga0187780_1088296923300017973Tropical PeatlandLYAAYLLIGRSANWRGARASRFCVFNFAVVILSFTVVNLFLTKAHRYF
Ga0187805_1000144293300018007Freshwater SedimentVVLLLYVVYFQLARTASWRGARASKLCIFNFFVVVMSFTVVNLYLSQSHRYF
Ga0187805_1043792723300018007Freshwater SedimentMYVAYFRLSRTAAWRGARASKLCVFNFVLVVLSFTVVNLYFSQHHRYF
Ga0187883_1043121613300018037PeatlandTAAWRGARASKLCVFNFVLVVVNFWVVNLFFSQHHRYF
Ga0187890_1085845223300018044PeatlandAWRGARASKLCVFNFVLVVVNFWVVNLFFSQHHRYF
Ga0187766_1070641513300018058Tropical PeatlandFQLARTAAWRGARASKLCVFNFVLVILSFTVVNLYFSQHHRYF
Ga0187769_1075240113300018086Tropical PeatlandTTAWRGARASKLCIFNFVIVFLSFTVVNLYLSHNHRFF
Ga0187771_1145938223300018088Tropical PeatlandRTAAWRGARASRLCVFNFFLVVVNFWVVNLFFSQHHRYF
Ga0066662_1019245633300018468Grasslands SoilRTTAWRGARASRLCIFNFVVVVLSFTVVNLYLSHSHRYF
Ga0066662_1110387423300018468Grasslands SoilWRGARASQLCIFNFAIVIFSFTVVNLFFSRSHRYF
Ga0193731_107626013300020001SoilVLFLYLLYFQLARTTAWRGARASRLCVFNFFVVVASFTVVNLYLSHTHRYF
Ga0193726_107306133300020021SoilNPGWRGARASQLCIFNFAIVIFSFTVVNLFFSRAHRYF
Ga0179590_116778623300020140Vadose Zone SoilFQLARTTAWRGARASKLCVFNFVLVVLSFTVVNLYFSSHHRYF
Ga0210407_1104770813300020579SoilRTTAWRGARASKLNVFNFGVVVLSFTVVNFYFSHSHRYF
Ga0210401_1008177613300020583SoilLLVLFLYVLYLRLSRTTAWRGGRASKLCVFNFAIVVLSFTVVNLYLSHSHRYF
Ga0210404_1073516623300021088SoilVVVVLLYAVYWLLARTTAWRGVRASRLCIFNFVIVVLSFTVVNLYLSHSHRYF
Ga0210404_1079552323300021088SoilTAWRGARASKLNVFNFGVVVLSFTVVNFYFSHSHRYF
Ga0210406_1074331523300021168SoilLARNPGWRGARASQLCIFNFAIVIFSFTVVNLFLSHAHRYF
Ga0210408_1032149823300021178SoilGAAAWRGARASKLCIFNFVIVVLSFTVVNLYLSHSHRYF
Ga0210408_1067529413300021178SoilYLQLSRTTSWRGARASRLCIFNFVIVILSFTVVNLYLSHSHRYF
Ga0210396_1045244313300021180SoilAWRGARASKLCVFNFVLVVLSFTVVNLFLSAHHRYF
Ga0210396_1053539623300021180SoilRTTAWRGARASKLCVFNFVLVVLSFTVVNLYFSAHHRYF
Ga0213876_1041691213300021384Plant RootsAAYWLLARTTTWRGARASLFCIFNFVIVVLSFTVVNLYLSHSHRYF
Ga0210393_1094153413300021401SoilLMLYAVYWLLSRTTTWRGVRASRLCIFNFVIVVLSFTVVNLYLSHSHRYF
Ga0210397_1028100713300021403SoilFRLARTASWRGARASKLCIFNFVLVVLSFTVVNLYLSHSHRYF
Ga0210386_1147753913300021406SoilTAAWRGARASRLCVFNFVLVILNFAVVNLFFSQSHRYF
Ga0210384_1004165313300021432SoilTWRGARASRLCIFNFVVVILSFTVVNLYLSHTHRYF
Ga0210391_1029049723300021433SoilRTTTWRGARASRLCIFNFVIVVLSFTVVNLYLSHSHRYF
Ga0210391_1067068413300021433SoilKYVITLVVLFLYLLYFQLARSTAWRGARASKLCVFNFFVVVMSFTVVNLYLSHSHRYF
Ga0210410_1017904513300021479SoilLLLYLVYFQLARTASWRGARASRLCIFNFFVVVMSFTVVNLYLSQSHRYF
Ga0210409_1022227013300021559SoilARTTAWRGARASKLCVFNFFVVVMSFTVVNLYLSHSHRYF
Ga0224520_112662923300023075SoilYFRLARTAAWRGARASKLCVFNFVLVVVNFWVVNLFFSQHHRYF
Ga0247666_110809813300024323SoilYAAYFQLARTTAWRGARASKLCVFNFVLVVLSFTVVNLYFSTHHRYF
Ga0137417_147625243300024330Vadose Zone SoilLYALYFRLARTTVWRGARASKLCIFNFVIVVLSFTVVNLYLSHSHRYF
Ga0208563_104220713300025501PeatlandAAWRGARASKLCVFNFVLVVVNFWVVNLFFSQHHRYF
Ga0207663_1035820223300025916Corn, Switchgrass And Miscanthus RhizosphereARTAAWRGARASRLCVFNFVLVILNFAVVNLFFSQSHRYF
Ga0207646_1187605723300025922Corn, Switchgrass And Miscanthus RhizosphereRSATWRGARASKLCIFNFGIVVLSFTVVNFYLSHSHRYF
Ga0209471_121386413300026318SoilLARNPGWRGARASQLCIFNFAIVIFSFTVVNLFFSRAHRYF
Ga0257173_102341313300026360SoilYVVTLLVLLLYVLYFRLARTATWRGARASKLCIFNFVVVVLSFTVVNLYLSHSHRYF
Ga0257176_105287213300026361SoilALYVLYFRLARTTGWRGARASKLCIFNFVIVVLSFTVVNLYLSHSHRYF
Ga0209690_121450613300026524SoilVLALYALYFRLARTTAWRGARASKLCIFNFVIVVLSFTVVNLYLSHSHRYF
Ga0209160_135797523300026532SoilFLARSAAWRGARASKLCVFNFLLVIFSFTAVNLFFSHSHRYF
Ga0208983_105390523300027381Forest SoilFVLLLYVLYFRLARTATWRGARASKLCIFNFAVVVLSFTVVNLYLSHSHRYF
Ga0209622_102763923300027502Forest SoilTTAWRGARASKLCVFNFVLVVLSFTVVNLYFSQHHRYF
Ga0209106_113082013300027616Forest SoilTTAWRGARASKLCVFNFFVVVLSFTVVNLYLSHSHRYF
Ga0209117_108968713300027645Forest SoilAYLQLSRTTSWRGARASRLCIFNFVIVILSFTVVNLYLSHSHRYF
Ga0209420_119522723300027648Forest SoilKYVVTLFVVLLYAIYWLLSRTTAWRGVRASRLCIFNFVIVVLSFTVVNLYLSHSHRYF
Ga0209736_116253023300027660Forest SoilTGWRGARASKLCIFNFVIVVLSFTVVNLYLSHSHRYF
Ga0209588_103122833300027671Vadose Zone SoilRTTSWRGARASRLCIFNFVIVILSFTVVNLYLSHSHRYF
Ga0209118_107785723300027674Forest SoilTATWRGARASKLCIFNFVVVVLSFTVVNLYLSHSHRYF
Ga0209178_119738223300027725Agricultural SoilYFRLARTASWRGARASKLCIFNFFVVVMSFTVVNLYLSQSHRYF
Ga0209073_1029441723300027765Agricultural SoilLLYVVYFRLARTASWRGARASKLCIFNFFVVVMSFTVVNLYLSQSHRYF
Ga0209655_1012782123300027767Bog Forest SoilLYAVYFFVARTAAWRGARASKFCVFNFVIVILSFTVVNLYLSQSHRYF
Ga0209040_1007406633300027824Bog Forest SoilVAYFQLARTAAWRGARASKLCVFNFVLVVLSFTVVNLYFSQHHRYF
Ga0209180_1055951623300027846Vadose Zone SoilAVYGAYFLLGRSSSWRGARASALCVFNFVFVMLSYTVVNLYLSHYHRYF
Ga0209167_1041994513300027867Surface SoilSASWRGARASKLCIFNFFVVVMSFTVVNLYLSQSHRYF
Ga0209283_1092969213300027875Vadose Zone SoilVYFRLARTTAWRGARASKLCIFNFVVVVLSFTVVNLYLSHSHRYF
Ga0209067_1087976013300027898WatershedsFHLARTTAWRGARASKLCVFNFVLVVLSFTVVNLYFSAHHRYF
Ga0209067_1094798013300027898WatershedsVLYVIYFRLARTAAWRGARASKLCIFNFAIVVLSFTVVNLYLSHSHRYF
Ga0209415_1066473623300027905Peatlands SoilVYFRLARTAAWRGARASKLCVLNFVLVVVNFWVVNLFFSQHHRYF
Ga0209006_1016741513300027908Forest SoilAWRGARASKLCVFNFVLVVLSFTVVNLYFSAHHRYF
Ga0311348_1133387723300030019FenTTAWRGARASRLCVFNFALVILSFTVVNLFLSPHHRFL
Ga0302310_1035920113300030737PalsaLVLLLYAVYFFVSRTAAWRGARASKFCIFNFVIVILSFTVVNLYISHSHRYF
Ga0073994_1232137413300030991SoilTWRGARASRLCIFNFVVVILSFTVVNLYLSHAHRYF
Ga0170834_10956177423300031057Forest SoilAFYLRMARYPAWRGARASQLCIFNFAIVIFSFTVVNLFFSRAHRYF
Ga0170823_1512744413300031128Forest SoilRNPSWRGARASQLCIFNFAIVIFSFTVVNLFFSHAHRYF
Ga0302325_1203824513300031234PalsaARTAAWRGARASKFCIFNFVIVILSFTVVNLYLSQSHRYF
Ga0302324_10333227523300031236PalsaWRGARASKFCIFNFVIVILSFTVVNLYLSQSHRYF
Ga0170820_1300682923300031446Forest SoilWRGARASQLCIFNFAIVIFSFTIVNLFFSRAHRYF
Ga0318538_1032773413300031546SoilRTAAWRGARASKLCVFNFVLVVLSFTVVNLYFSQHHRYF
Ga0310915_1008079613300031573SoilFQLARTAAWRGARASKLCVFNFVLVVLSFTVVNLYFSQHHRYF
Ga0307469_1009716013300031720Hardwood Forest SoilYLRLARNPSWRGARASQLCIFNFAIVIFSFTVVNLFFSHAHRYF
Ga0307477_1079987323300031753Hardwood Forest SoilYLLYFGLARTTAWRGGRASKLCIFNFVIVVLSFTVVNLYLSHSHRYF
Ga0307475_1005023713300031754Hardwood Forest SoilTSWRGARASRLCIFNFVIVILSFTVVNLYLSHSHRYF
Ga0307475_1030141713300031754Hardwood Forest SoilYLQLSRTTTWRGARASRLCIFNFVIVILSFTVVNLYLSHSHRYF
Ga0307475_1048147313300031754Hardwood Forest SoilSYAVYFRLARTTGWRGARASKLCVLNFLIVFLSFTVVNFYFSPSHRFF
Ga0307475_1091291513300031754Hardwood Forest SoilRTTGWRGARASKLCIFNFAIVVLSFTVVNLYLSHSHRYF
Ga0318498_1023911923300031778SoilARTAAWRGARASKLCVFNFVLVVLSFTVVNLYFSQHHRYF
Ga0307478_1001609513300031823Hardwood Forest SoilYAIYFQLSRTTAWRGARASRLCVFNFFLVVFSFTVVNLYLSHSHRYF
Ga0306925_1017841633300031890SoilWRGARASKLCVFNFVLVVLSFTVVNLYFSQHHRYF
Ga0306925_1049020613300031890SoilVVYYLLARTAAWRGARASLLCVFNFLLVLLSFTVVNYISPNHRYF
Ga0318551_1085977513300031896SoilAWRGARASLLCVFNFLLVLLSFTVVNYISPNHRYF
Ga0310916_1057275713300031942SoilRLARTAAWRGARASKLCVFNFVLVVLSFTVVNLFLTQHHRYF
Ga0307479_1146400313300031962Hardwood Forest SoilTWRGARASKLCVFNFVIVVLNFTVVGFFLSHSHRYF
Ga0306922_1154941713300032001SoilARTAAWRGARASRFCVFNFVLVVLSFTVVNLYFSPHHKYF
Ga0307470_1061537223300032174Hardwood Forest SoilWRGARASQLCIFNFVIVIFSFTVVNLFFSHAHRYF
Ga0307471_10161780123300032180Hardwood Forest SoilRLARTATWRGARASKLCIFNFVVVVLSFTVVNLYLSHSHRYF
Ga0307472_10157747223300032205Hardwood Forest SoilLYFRLARSAAWRGARASKLCIFNFVVVVLSFTVVNLYLSHSHRYF
Ga0306920_10444095913300032261SoilLYVIYYLLARTAAWRGARASLLCVFNFLLVLLSFTVVNYISPNHRYF
Ga0335085_1025902313300032770SoilVAYFRLARTAAWRGARASKLCIFNFVLVILSFTVVNLYLSQHHRYF
Ga0335071_1003097113300032897SoilASWRGARASKLCVFNFALVILSFTVVNLYFSQHHRYF
Ga0335076_1008683613300032955SoilFQLARTAAWRGARASKLCVFNFALVILSFTVVNLYLSQHHRYF
Ga0335076_1039004513300032955SoilLARTAAWRGARASKLCIFNFVVVILNFAVVGYWSHSHRYF
Ga0335076_1076944623300032955SoilLYVVYLRVAQTALWRGARASILCVFNFILVVLSFTVVNLYLSSHHRYF


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