Metagenome / Metatranscriptome Family F040292

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F040292
Family Type	Metagenome / Metatranscriptome
Number of Sequences	162
Average Sequence Length	81 residues
Representative Sequence	TMTYTSVTAPPVPIRARDVSDSAVVSELGPYHSIAANADVVTTTTGKVRGDSLNGTFEMRPAGGGNPIMSGNFRSKRVTP
Number of Associated Samples	121
Number of Associated Scaffolds	162

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	9.94 %
% of genes near scaffold ends (potentially truncated)	83.33 %
% of genes from short scaffolds (< 2000 bps)	84.57 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.383 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (27.778 % of family members)
Environment Ontology (ENVO)	Unclassified (55.556 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.346 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 45.37% Coil/Unstructured: 54.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 162 Family Scaffolds
PF08570	DUF1761	29.01
PF01370	Epimerase	4.94
PF13460	NAD_binding_10	3.70
PF02219	MTHFR	3.09
PF03606	DcuC	1.85
PF05193	Peptidase_M16_C	1.23
PF02574	S-methyl_trans	0.62
PF00535	Glycos_transf_2	0.62
PF00873	ACR_tran	0.62
PF01479	S4	0.62
PF02368	Big_2	0.62
PF13349	DUF4097	0.62
PF01118	Semialdhyde_dh	0.62

COG ID	Name	Functional Category	% Frequency in 162 Family Scaffolds
COG0685	5,10-methylenetetrahydrofolate reductase	Amino acid transport and metabolism [E]	3.09
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.62
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.62

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.38 %
Unclassified	root	N/A	0.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.38 %
Unclassified	root	N/A	0.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.38 %
Unclassified	root	N/A	0.62 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	60.49 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.62 %
Unclassified	root	N/A	0.62 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	58.02 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.47 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.62 %
Unclassified	root	N/A	0.62 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	21.60 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.47 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.62 %
Unclassified	root	N/A	0.62 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	21.60 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	2.47 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.62 %
Unclassified	root	N/A	0.62 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	21.60 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	2.47 %
Candidatus Rokubacteria bacterium 13_1_20CM_4_70_13	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_20CM_4_70_13	0.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.62 %
Unclassified	root	N/A	0.62 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002560\|JGI25383J37093_10032878	All Organisms → cellular organisms → Bacteria	1729	Open in IMG/M
3300002561\|JGI25384J37096_10007665	All Organisms → cellular organisms → Bacteria	4022	Open in IMG/M
3300002561\|JGI25384J37096_10209886	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	570	Open in IMG/M
3300002908\|JGI25382J43887_10046068	All Organisms → cellular organisms → Bacteria	2372	Open in IMG/M
3300005177\|Ga0066690_10184591	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300005178\|Ga0066688_10185922	All Organisms → cellular organisms → Bacteria	1314	Open in IMG/M
3300005179\|Ga0066684_10013520	All Organisms → cellular organisms → Bacteria → Proteobacteria	4048	Open in IMG/M
3300005440\|Ga0070705_100340208	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1090	Open in IMG/M
3300005450\|Ga0066682_10092892	All Organisms → cellular organisms → Bacteria	1886	Open in IMG/M
3300005451\|Ga0066681_10081209	All Organisms → cellular organisms → Bacteria	1828	Open in IMG/M
3300005471\|Ga0070698_101129110	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	732	Open in IMG/M
3300005540\|Ga0066697_10696487	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	556	Open in IMG/M
3300005545\|Ga0070695_100959333	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	693	Open in IMG/M
3300005552\|Ga0066701_10099593	All Organisms → cellular organisms → Bacteria	1695	Open in IMG/M
3300005552\|Ga0066701_10192523	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300005554\|Ga0066661_10113314	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300005554\|Ga0066661_10645485	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	624	Open in IMG/M
3300005555\|Ga0066692_10247103	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1126	Open in IMG/M
3300005556\|Ga0066707_10084431	All Organisms → cellular organisms → Bacteria	1922	Open in IMG/M
3300005559\|Ga0066700_10771454	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	651	Open in IMG/M
3300005569\|Ga0066705_10960091	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	507	Open in IMG/M
3300005576\|Ga0066708_11039446	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	508	Open in IMG/M
3300005886\|Ga0075286_1052261	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300006031\|Ga0066651_10251387	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300006034\|Ga0066656_10198720	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1275	Open in IMG/M
3300006173\|Ga0070716_100170178	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300006755\|Ga0079222_10852905	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	755	Open in IMG/M
3300006796\|Ga0066665_11068216	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	616	Open in IMG/M
3300006797\|Ga0066659_11747225	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	525	Open in IMG/M
3300006804\|Ga0079221_10198486	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300006804\|Ga0079221_10990559	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	629	Open in IMG/M
3300006903\|Ga0075426_10028720	All Organisms → cellular organisms → Bacteria	3984	Open in IMG/M
3300006914\|Ga0075436_100785157	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	708	Open in IMG/M
3300007076\|Ga0075435_100321483	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300007255\|Ga0099791_10009782	All Organisms → cellular organisms → Bacteria	3994	Open in IMG/M
3300007258\|Ga0099793_10043565	All Organisms → cellular organisms → Bacteria	1956	Open in IMG/M
3300009012\|Ga0066710_101360368	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300009038\|Ga0099829_11189215	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	631	Open in IMG/M
3300009089\|Ga0099828_11963499	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	512	Open in IMG/M
3300009090\|Ga0099827_10067512	All Organisms → cellular organisms → Bacteria	2749	Open in IMG/M
3300009090\|Ga0099827_10190542	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1701	Open in IMG/M
3300009137\|Ga0066709_100008943	All Organisms → cellular organisms → Bacteria	8919	Open in IMG/M
3300009137\|Ga0066709_100056845	All Organisms → cellular organisms → Bacteria	4474	Open in IMG/M
3300009137\|Ga0066709_100143030	All Organisms → cellular organisms → Bacteria	3041	Open in IMG/M
3300009137\|Ga0066709_100689411	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1467	Open in IMG/M
3300009137\|Ga0066709_103712139	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	554	Open in IMG/M
3300009143\|Ga0099792_10213125	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1105	Open in IMG/M
3300009143\|Ga0099792_10792163	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	620	Open in IMG/M
3300009147\|Ga0114129_10022837	All Organisms → cellular organisms → Bacteria	8870	Open in IMG/M
3300010301\|Ga0134070_10017776	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2295	Open in IMG/M
3300010301\|Ga0134070_10188026	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	753	Open in IMG/M
3300010301\|Ga0134070_10203457	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	727	Open in IMG/M
3300010304\|Ga0134088_10051577	All Organisms → cellular organisms → Bacteria	1891	Open in IMG/M
3300010323\|Ga0134086_10061477	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1287	Open in IMG/M
3300010323\|Ga0134086_10125714	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	922	Open in IMG/M
3300010325\|Ga0134064_10219724	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	690	Open in IMG/M
3300010325\|Ga0134064_10312963	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	602	Open in IMG/M
3300010326\|Ga0134065_10143414	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	828	Open in IMG/M
3300010329\|Ga0134111_10081440	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1220	Open in IMG/M
3300010333\|Ga0134080_10453971	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	601	Open in IMG/M
3300010336\|Ga0134071_10234507	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	911	Open in IMG/M
3300010336\|Ga0134071_10613587	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	570	Open in IMG/M
3300010337\|Ga0134062_10184598	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	943	Open in IMG/M
3300010371\|Ga0134125_12629334	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	547	Open in IMG/M
3300011269\|Ga0137392_10691316	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	845	Open in IMG/M
3300012198\|Ga0137364_10028111	All Organisms → cellular organisms → Bacteria	3557	Open in IMG/M
3300012198\|Ga0137364_10153190	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1668	Open in IMG/M
3300012199\|Ga0137383_10456456	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300012201\|Ga0137365_10140540	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1815	Open in IMG/M
3300012201\|Ga0137365_10303901	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1182	Open in IMG/M
3300012202\|Ga0137363_10418956	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300012203\|Ga0137399_10251808	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300012206\|Ga0137380_10244315	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1619	Open in IMG/M
3300012206\|Ga0137380_11509622	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	556	Open in IMG/M
3300012210\|Ga0137378_10016281	All Organisms → cellular organisms → Bacteria	6470	Open in IMG/M
3300012210\|Ga0137378_10760767	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	881	Open in IMG/M
3300012211\|Ga0137377_10854209	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	842	Open in IMG/M
3300012211\|Ga0137377_10866489	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	835	Open in IMG/M
3300012285\|Ga0137370_10376270	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	858	Open in IMG/M
3300012285\|Ga0137370_10639094	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	660	Open in IMG/M
3300012349\|Ga0137387_11210938	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	533	Open in IMG/M
3300012357\|Ga0137384_10851305	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300012361\|Ga0137360_10168348	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300012361\|Ga0137360_10855858	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	783	Open in IMG/M
3300012361\|Ga0137360_11146346	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	672	Open in IMG/M
3300012362\|Ga0137361_10576788	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium 13_1_20CM_4_70_13	1031	Open in IMG/M
3300012403\|Ga0134049_1335699	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	727	Open in IMG/M
3300012582\|Ga0137358_10416739	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300012683\|Ga0137398_10648220	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	732	Open in IMG/M
3300012918\|Ga0137396_10083526	All Organisms → cellular organisms → Bacteria	2254	Open in IMG/M
3300012927\|Ga0137416_10840654	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	814	Open in IMG/M
3300012927\|Ga0137416_11445610	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	623	Open in IMG/M
3300012927\|Ga0137416_11670339	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	581	Open in IMG/M
3300012929\|Ga0137404_10269991	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300012929\|Ga0137404_10507542	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300012930\|Ga0137407_10015890	All Organisms → cellular organisms → Bacteria	5497	Open in IMG/M
3300012930\|Ga0137407_10288886	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300012944\|Ga0137410_10141493	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300012972\|Ga0134077_10150682	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	928	Open in IMG/M
3300012975\|Ga0134110_10598155	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	512	Open in IMG/M
3300012976\|Ga0134076_10468246	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	571	Open in IMG/M
3300012986\|Ga0164304_11421127	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	570	Open in IMG/M
3300014150\|Ga0134081_10192908	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	689	Open in IMG/M
3300014154\|Ga0134075_10343764	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	653	Open in IMG/M
3300014154\|Ga0134075_10431573	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	584	Open in IMG/M
3300014157\|Ga0134078_10116687	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300014157\|Ga0134078_10324895	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	669	Open in IMG/M
3300015052\|Ga0137411_1128406	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300015054\|Ga0137420_1283729	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300015356\|Ga0134073_10122902	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	793	Open in IMG/M
3300015358\|Ga0134089_10067815	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300015359\|Ga0134085_10351935	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	655	Open in IMG/M
3300015359\|Ga0134085_10389398	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	624	Open in IMG/M
3300015359\|Ga0134085_10614680	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	506	Open in IMG/M
3300017657\|Ga0134074_1093215	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300017657\|Ga0134074_1109148	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300017659\|Ga0134083_10078268	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300017659\|Ga0134083_10386537	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	608	Open in IMG/M
3300017659\|Ga0134083_10598137	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	504	Open in IMG/M
3300018433\|Ga0066667_11477357	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	600	Open in IMG/M
3300018482\|Ga0066669_10183962	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300019866\|Ga0193756_1046393	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	599	Open in IMG/M
3300024325\|Ga0247678_1023291	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	952	Open in IMG/M
3300025910\|Ga0207684_10132131	All Organisms → cellular organisms → Bacteria	2142	Open in IMG/M
3300025939\|Ga0207665_10371904	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300025939\|Ga0207665_11405178	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	556	Open in IMG/M
3300026277\|Ga0209350_1061595	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1071	Open in IMG/M
3300026277\|Ga0209350_1119349	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	600	Open in IMG/M
3300026295\|Ga0209234_1014381	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	2994	Open in IMG/M
3300026300\|Ga0209027_1007671	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	4070	Open in IMG/M
3300026305\|Ga0209688_1064691	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	661	Open in IMG/M
3300026306\|Ga0209468_1004606	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	5441	Open in IMG/M
3300026306\|Ga0209468_1160671	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	576	Open in IMG/M
3300026307\|Ga0209469_1043318	All Organisms → cellular organisms → Bacteria	1448	Open in IMG/M
3300026307\|Ga0209469_1105389	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	759	Open in IMG/M
3300026309\|Ga0209055_1118004	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1015	Open in IMG/M
3300026314\|Ga0209268_1166207	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	542	Open in IMG/M
3300026317\|Ga0209154_1078465	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300026323\|Ga0209472_1022204	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	3012	Open in IMG/M
3300026327\|Ga0209266_1074931	All Organisms → cellular organisms → Bacteria	1560	Open in IMG/M
3300026328\|Ga0209802_1084157	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1468	Open in IMG/M
3300026332\|Ga0209803_1217332	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	681	Open in IMG/M
3300026343\|Ga0209159_1047023	All Organisms → cellular organisms → Bacteria	2154	Open in IMG/M
3300026343\|Ga0209159_1108844	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300026524\|Ga0209690_1047635	All Organisms → cellular organisms → Bacteria	1937	Open in IMG/M
3300026524\|Ga0209690_1232530	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	579	Open in IMG/M
3300026527\|Ga0209059_1212482	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	651	Open in IMG/M
3300026538\|Ga0209056_10010820	All Organisms → cellular organisms → Bacteria	9245	Open in IMG/M
3300026540\|Ga0209376_1203002	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	899	Open in IMG/M
3300026540\|Ga0209376_1391288	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	520	Open in IMG/M
3300026542\|Ga0209805_1002684	All Organisms → cellular organisms → Bacteria	10350	Open in IMG/M
3300027787\|Ga0209074_10192940	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	760	Open in IMG/M
3300027903\|Ga0209488_10053658	All Organisms → cellular organisms → Bacteria	2970	Open in IMG/M
3300028536\|Ga0137415_10621766	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300028791\|Ga0307290_10366554	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	527	Open in IMG/M
3300028819\|Ga0307296_10384353	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	767	Open in IMG/M
3300028878\|Ga0307278_10492339	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	536	Open in IMG/M
3300028884\|Ga0307308_10390001	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	667	Open in IMG/M
3300031152\|Ga0307501_10219810	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	552	Open in IMG/M
3300031720\|Ga0307469_10155344	All Organisms → cellular organisms → Bacteria	1720	Open in IMG/M
3300031740\|Ga0307468_101169036	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	691	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.53%
Host-Associated	Host-Associated	2.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.53%
Plants	Host-Associated → Plants	2.47%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.47%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.59%
Loam	Environmental → Terrestrial → Soil → Loam	4.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.47%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.62%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	53.09%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	35.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.32%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.62%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	27.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	20.37%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.47%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.47%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.23%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.62%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.62%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25383J37093_100328784	3300002560	Grasslands Soil	DVSDSAVVSELGPYHSITAKADVVTITTGKVRGDSLNGTFEMRPVAGGNTIMTGTFRSKRIAP*
JGI25384J37096_100076652	3300002561	Grasslands Soil	VPIRARDVSDSAVVNEIGPYHSIIANADVVTTTTGKVRGDSLNGIFEMRPAGGGNVIMSGNFRSKRVVP*
JGI25384J37096_102098861	3300002561	Grasslands Soil	WEGRSFRSASDTGTPWRIVTAVASDGSLRGTMTYTSVTAPPVPIRARDVSDSAVVSELGPYHSIAADADVVTTTTGKLRGDSLNGTFEMRPAGGVNVIMSGNFRSKRVVP*
JGI25382J43887_100460681	3300002908	Grasslands Soil	TPWRIVTAVAPDGSLRGTMTYTSVTAPPVPIRARDVSDSAVVNEIGPYHSITANADVVTTTTGKLRGDSLNGTFEMRPAGGGNVIMSGNFRSKRVVP*
Ga0066690_101845911	3300005177	Soil	VNEIGPYQSPSAHRRVLTTTTGRLHGDSLNGTFEMRPVEGGNAIMSGTFRSKRVVP*
Ga0066688_101859221	3300005178	Soil	APPVPIRARDVSDSAVVNEIGPYHSIIANADVVTTTTGKVRGDSLNGIFEMRPAGGGNVIMSGNFRSKRVVP*
Ga0066684_100135207	3300005179	Soil	PIPVRARQVSDTTLVNEIGPYQSPAAQRRVLTTTTGRLHGDSLNGTFDMRPADGGNAIMSGRFRSKRVVP*
Ga0070705_1003402081	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	IPIRAREVSDTALVNEIGPYHSPTANADVVTRTTGKLRGDSLNGTFEMRPAAGGKAIMTGTFRTARVTP*
Ga0066682_100928921	3300005450	Soil	EVSDTALVNELGPYHSLTADADVITTTIGKVRGDSLNGTFEMRPAGGGKPLMSGTFRSKRVAS*
Ga0066681_100812091	3300005451	Soil	VPIRTREVSDTALVNELGPYHSLTADADVITTTIGKVRGDSLNGTFEMRPAGGGKPLMSGTFRSKRVAS*
Ga0070698_1011291102	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VPIRARDVSDSAVVSELGPYHSIAANADVVTTTTGKLRGDSLNGTFEMRPAGGGNVIMSGNFRSKRVVP*
Ga0066697_106964872	3300005540	Soil	RDVSDSAVVNEIGPYHSIIANADVVTTTTGKVRGDSLNGIFEMRPAGGGNVIMSGNFRSKRVVP*
Ga0070695_1009593331	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MTYTSVTAPPVPIRARDVSDSAVVSELGPYHSIAANADVVTTTTGKLRGDSLNGTFEMRPAGGGNVIMSGNFRSKRVVP*
Ga0066701_100995934	3300005552	Soil	RSYRSASDTGTPWRIVTAVAPDGSLRGTMTYTSVTAPPVPIRARDVSDTAVVNELGPYHSIAANADVVTVATGKVRGDSLNGTFEMRPAAGGNPIMTGNFRSKRVTP*
Ga0066701_101925233	3300005552	Soil	RSYRSASDTGTPWRIVTAVAPDGSLRGTMTYTSVTAPPVPIRARDVSDTAVVNELGPYHSIAANADVVTIATGKVRGDSLNGTFEMRPAAGGSPIMTGNFRSKRVTP*
Ga0066661_101133144	3300005554	Soil	QVPEPPIPVRARQVSDTALVNEIGPYQSPSAHRRVLTTTTGRLHGDSLNGTFEMRPVEGGNAIMSGTFRSKRVVP*
Ga0066661_106454852	3300005554	Soil	QVPEPPIPVRARQVSDTALVNEIGPYQSPSAHRRVLTTTTGRLHGDSLNGTFEMRPAEGGNAIMSGTFRSKRVAP*
Ga0066692_102471033	3300005555	Soil	PIRARDVSDSAVVSELGPYHSIAADADVVTTTTGKLRGDSLNGTFEMRPAGGVNVIMSGNFRSKRVVP*
Ga0066707_100844311	3300005556	Soil	FRSSTDTGTPFRIVAHVAEDGTLRSTLLFTAVQAPPVPIRARHVSDTLLVNEIGPYHSPTANADVVTVATGKLRGDSLNGTFEMRPAAGGTPIMNGAFRTRRVTP*
Ga0066700_107714541	3300005559	Soil	APDGSLRGTMTYTSVTAPPVPIRTRDVSDTAVVHELGPYHSIVANADVVTLATGKVRGDSLNGTFEMRRVDGGNVIMTGNFRSRRVTP*
Ga0066705_109600912	3300005569	Soil	NEIGPYQSPAAQRRVLTTTTGRLHGDSLNGTFDMRPADGGNAIMSGRFRSKRVVP*
Ga0066708_110394462	3300005576	Soil	SVTAPPVPIRTRDVSDTAVVHELGPYHSIVANADVVTLATGKVRGDSLNGTFETRRVDGGNVIITGNFRSRRVTP*
Ga0075286_10522612	3300005886	Rice Paddy Soil	PIRARQVSDTSLVNEIGPYHSPTANADVVTTATGRLRGDSLNGTFEMRPAGGGNPIVSGTFRSKRVVQ*
Ga0066651_102513871	3300006031	Soil	APDGSLRGTLTYTSVTAPPVPIRARDVSDSAVVNEIGPYHSIIANADVVTTTTGKVRGDSLNGIFEMRPAGGGNVIMSGNFRSKRVVP*
Ga0066656_101987203	3300006034	Soil	VSDTVVVSELGPYHSLSANADVVTTTTGKVRGDSLNGTFEMRPAGGGNPIMSGNFRSKRVTP*
Ga0070716_1001701784	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	DTGTPWRIVTAVVQDGSLRGTMTYTSVTAPPVPIRARDVSDSAVVNELGPYHSIVAKADVVTTATGRVRGDSLNGTFEMRPAGGGNVIMTGTFRSKRVAP*
Ga0079222_108529052	3300006755	Agricultural Soil	LVNEIGPYHSPTANADVVTRTTGKLRGDSLNGTFEMRPAAGGNAIMTGTFRTARVTP*
Ga0066665_110682161	3300006796	Soil	IVTAVAPDGSLRGTMTYTSVTAPPVPIRARDVSDSAVVNELGPYHSIAANAEVVTIATGKVRGDSLNGTFEMRPAGGGNLIMTGNFRSKRVAP*
Ga0066659_117472252	3300006797	Soil	QAPPVPIRARHVSDTLLVNEIGPYHSPTANADVVTVATGKLRGDSLNGTFEMRPAAGGTPIMNGAFRTRRVTP*
Ga0079221_101984863	3300006804	Agricultural Soil	SDTGTPIRIVAHVAQDGTLRATLMFTTVQAPPIPIRAREVSDTALVNEIGPYHSPTANADVVTRTTGKLRGDSLNGTFEMRPAAGGNAIMTGTFRTARVTP*
Ga0079221_109905592	3300006804	Agricultural Soil	SSDTGIPWRIVTAVVQDGSLRGTMTYTSVTAPPVPIRTRDVSDSAVVNEFGPYHSLAAKADVVTTATGRLRGDSLNGTFDMRPAAGGKTIMTGTFRSKRVAP*
Ga0075426_100287201	3300006903	Populus Rhizosphere	MFPQAPEPPIPVRARHVSDTVLVNEIGPYESPAAHHRVVTTTTGRLHGDSLNGTFEMRPADGGNAIMSGRFRSKRAAP*
Ga0075436_1007851572	3300006914	Populus Rhizosphere	VSELGPYHSIAANADVVTTTTGKLRGDSLNGTFEMRPAGGGNVIMSGNFRSKRVVP*
Ga0075435_1003214831	3300007076	Populus Rhizosphere	SDSAVVNEIGPYHSIAANADVVTTTTGKVRGDSLNGTFEMRPAGGGNVIMSGNFRSKRVVP*
Ga0099791_100097827	3300007255	Vadose Zone Soil	AVVSELGPYHSITAKADVVTITTGKVRGDSLNGTFEMRPAAGGNTIMTGTFRSKRIAP*
Ga0099793_100435652	3300007258	Vadose Zone Soil	VQDGSLRGTMTYTSVTAPPVPIRARDVSDSAVVHELGPYHSIVAKADVVTTATGRLRGDSLNGTFEMRPAGGGNVIMTGTFRSKRVAP*
Ga0066710_1013603681	3300009012	Grasslands Soil	IRTREVSDTALVNELGPYHSLTADADVITTTIGKVRGDSLNGTFEMRPAGGGKPLMSGTFRSKRVAS
Ga0099829_111892152	3300009038	Vadose Zone Soil	SDTGTPWRIVTAVAPDGSLRGTLTYTSVTAPPVPIRARDVSDSAVVNEIGPYHSITANADVVTTTTGKVRGDSLNGTFEMRPAGGGNVIMSGNFRSKRVTP*
Ga0099828_119634991	3300009089	Vadose Zone Soil	RSFRSAADTGTPWRIVTAVVQDGSLRGTMTYTSVTAPPVPIRARDVSDSAVVNELGPYHSIVAKADVVTTATGRLRGDSLNGTFEMRPVAGGNVIMSGTFRSKRVAP*
Ga0099827_100675122	3300009090	Vadose Zone Soil	MTYTSVTAPPVPIRARDVSDSAVVNEIGPYHSLAANADVVTTATGRVRGDSLNGTFEMRPAAGGNVIMTGTFRSKRIAP*
Ga0099827_101905422	3300009090	Vadose Zone Soil	VTAVAPDGSLRGTMTYTSVTAPPVPIRARDVSDTAVVSELGPYHSITAKLDVVTTTTGKLRGDSLNGTFEMRPAGGGNVIMSGNFRSKRVVP*
Ga0066709_1000089431	3300009137	Grasslands Soil	IRTREVSDTALVNELGPYHSLTADADVITTTIGKVRGDSLNGTFEMRPAGGGKPLMSGTFRSKRVAS*
Ga0066709_1000568455	3300009137	Grasslands Soil	VTAVAPDGSLRGTMTYTSVTAPPVPIRARDVSDTAVVNELGPYHSIAANADVVTVATGKVRGDSLNGTFEMRPAAGGNPIMTGNFRSKRVTP*
Ga0066709_1001430302	3300009137	Grasslands Soil	MTYTSVTAPPVPIRARDVSDSAVVNELGPYHSIAANADVVTITRGKLRGDSLNGTFEMRPAGRGNVIMNGNFRSKRVTP*
Ga0066709_1006894111	3300009137	Grasslands Soil	AAPVVHELGPYHGIVANADVGTLATGKVRGDSLNGTFEMRRVDGGNVIMTGNFRSRRVTP
Ga0066709_1037121392	3300009137	Grasslands Soil	REVSDTVVVSELGPYHSLSANADVVTTTTGKVRGDSLNGTFEMRPAGGGNPIMSGNFRSKRVTP*
Ga0099792_102131252	3300009143	Vadose Zone Soil	VTAVAPDGSLRGTMTYTSVTAPPVPIRARDVSDTAVVSELGPYHSITAKLDVVTTTTGKLRGDSLNGTFEMRPAGGGNVIMSGNFRSKRVTP*
Ga0099792_107921631	3300009143	Vadose Zone Soil	IRARDVSDSAVVSELGPYHSIAANADVVTTTTGKLRGDSLNGIFEMRPAGGGNVIMSGNFRSKRVVP*
Ga0114129_100228374	3300009147	Populus Rhizosphere	VTAVAPDGSLRGTMTYTSVTAPPVPIRARDVSDSAVVSELGPYHSIAANADVVTTTTGKLRGDSLNGTFEMRPAGGGNVIMSGNFRSKRVVP*
Ga0134070_100177763	3300010301	Grasslands Soil	MAPDGSLRGTMTYTSVTAPPVPIRTRDVSDTAVVHELGPYHSIVANADVVTLATGKVRGDSLNGTFETRRVDGGNVIITGNFRSRRVTP*
Ga0134070_101880261	3300010301	Grasslands Soil	RDVSDTAVVHELGPYHSIVANADVVTLATGKVRGDSLNGTFEMRRVDGGNVIMTGNFRSRRVTP*
Ga0134070_102034572	3300010301	Grasslands Soil	WDGRSYRSASDTGIPFRIVTAVAQDGSLRGTMTLTSLTAAPVPVRAREVSDTVVVSELGPYHSLSANADVVTTTTGKVRGDSLNGTFEMRPAGGGNPIMSGNFRSKRVTP*
Ga0134088_100515774	3300010304	Grasslands Soil	VTAVTQDGSLRGTLTYTSVTASPVPIRTREVSDTALVNELGPYHSLTADADVITTTIGKVRGDSLNGTFEMRPAGGGKPLMSGTFRSKRVAS*
Ga0134086_100614771	3300010323	Grasslands Soil	TMTYTSVTAPPVPIRARDVSDSAVVSELGPYHSIAANADVVTTTTGKVRGDSLNGTFEMRPAGGGNPIMSGNFRSKRVTP*
Ga0134086_101257142	3300010323	Grasslands Soil	DGSLRGTMTYTSVTAPPVPIRTRDVSDTAVVHELGPYHSIVANADVVTLATGKVRGDSLNGTFETRRVDGGNVIITGNFRSRRVTP*
Ga0134064_102197241	3300010325	Grasslands Soil	VRARQVSDTTLVNEIGPYQSPAAQRRVLTTTTGRLHGDSLNGTFDMRPADGGNAIMSGRFRSKRVVP*
Ga0134064_103129633	3300010325	Grasslands Soil	SDTAVVHELGPYHSIVANADVVTLATGKVRGDSLNGTFEMRRVDGGNVIMTGNFRSRRVTP*
Ga0134065_101434142	3300010326	Grasslands Soil	VTAVASDGSLRGTMTYTSVTAPPVPIRARDVSDTAVVNELGPYHSIAANADVVTVATGKVRGDSLNGTFEMRPAAGGNPIMTGNFRSKRVTP*
Ga0134111_100814402	3300010329	Grasslands Soil	MTYTSVTAPPVPIRTRDVSDTAVVHELGPYHSIVANADVVTLATGKVRGDSLNGTFETRRVDGGNVIITGNFRSRRVTP*
Ga0134080_104539711	3300010333	Grasslands Soil	TAPPVPIRARDVSDSAVVSELGPYHSIAANADVVTTTTGKVRGDSLNGTFEMRPAGGGNPIMSGNFRSKRVTP*
Ga0134071_102345072	3300010336	Grasslands Soil	MTYTSVTAPPVPIRTRDVSDTAVVHELGPYHSIAANADVVTIATGKVRGDSLNGTFEMRRADGGNVIMTGNFRSRRVTP*
Ga0134071_106135871	3300010336	Grasslands Soil	LTSLTAAPVPVRAREVSDTVVVSELGPYHSLSANADVVTTTTGKVRGDSLNGTFEMRPAGGGNPIMSGNFRSKRVTP*
Ga0134062_101845983	3300010337	Grasslands Soil	GSLRGTMTYTSLTAPPVPIRTRDVSDSAVVNELGPYHSIAANADVVTVATGKVRGDSLNGTFEMRPAAGGNPIMTGNFRSKRVTP*
Ga0134125_126293342	3300010371	Terrestrial Soil	VQDGSLRGTMTYTSVTAPPVPIRARDVSDSAVVNELGPYHSIVAKADVVTTATGRVRGDSLNGTFEMRPAGGGNVIMTGTFRSKRVAP*
Ga0137392_106913161	3300011269	Vadose Zone Soil	ASVTAPPVPIRARDVSDSAVVSEIGPYHSITAKADVVTITTGKVRGDSLNGTFEMRPAAGGNTIMTGTFRSKRVAP*
Ga0137364_100281115	3300012198	Vadose Zone Soil	VTAVTQDGSLRGTLTYTSVTASPVPIRTREVSDTAVVNELGPYHSLIADADVITTTIGKVRGDSLNGTFEMRPAGGGKPLMSGTFRSKRVAS*
Ga0137364_101531901	3300012198	Vadose Zone Soil	TGTTWRIVTAVAPDGSLRGTMTYTSVTAPPVPIRARDVSDSAVVSELGPYHSIAANADVVTTTTGKVRGDSLNGTFEMRPAGGGNPIMSGNFRSKRVTP*
Ga0137383_104564561	3300012199	Vadose Zone Soil	DTGTPWRIVTAVAPDGSLRGTLTYTSVTAPPVPIRARDVSDSAVVNEIGPYHSITANADVVTTTTGKVRGDSLNGTFEMRPAGGGNVIMSGNFRSKRVVP*
Ga0137365_101405401	3300012201	Vadose Zone Soil	SDSAVVSELGPYHSIAANADVVTTTTGKVRGDSLNGTFEMRPAGGGNPIMSGNFRSKRVTP*
Ga0137365_103039013	3300012201	Vadose Zone Soil	SDSAVVSELGPYHSIAANADVVTTTTGKVRGDSLNGTFEMRPAGGGNAIMTGNFRSKRVAP*
Ga0137363_104189562	3300012202	Vadose Zone Soil	VTAVAPDGSLRGTMTYTSVTAPPVPIRARDVSDTAVVNELGPYHSIAANADVVTIATGKVRGDSLNGTFEMRPAAGGSPIMTGNFRSKRVTP*
Ga0137399_102518082	3300012203	Vadose Zone Soil	MTYASVTAPPVPIRARDVSDSAVVSELGPYHSITAKADVVTITTGKVRGDSLNGTFEMRPAAGGNTIMTGTFRSKRVAP*
Ga0137380_102443151	3300012206	Vadose Zone Soil	VTAPPVPIRTRDVSDTAVVHELGPYHSIAANADVVTIATGKVRGDSLNGTFEMRRADGGNVIMTGNFRSRRVTP*
Ga0137380_115096221	3300012206	Vadose Zone Soil	GRSFRSASDTGTPWRIVTAVAPDGSLRGTLTYTSVTAPPVPIRARDVSDSAVVNEIGPYHSITANADVVTTTTGKVRGDSLNGTFEMRPAGGGNVIMSGNFRSKRVVP*
Ga0137378_100162819	3300012210	Vadose Zone Soil	WEGRSYRSASDTGTPWRIVTAVAPDGSLRGTMTYTSVTAPPVPIRARDVSDTAVVNELGPYHSIAANADVVTVATGKVRGDSLNGTFEMRPAAGGNPIMTGNFRSKRVTP*
Ga0137378_107607671	3300012210	Vadose Zone Soil	DGSLRGTLTYTSVTAPPVPIRARDVSDSAVVNEIGPYHSIIANADVVTTTTGKVRGDSLNGIFEMRPAAGGNVIMSGNFRSKRVVP*
Ga0137377_108542092	3300012211	Vadose Zone Soil	GRSYRSASDTGTPFRIVTAVAQDGSLRGTMTYTSLTAPPVPVRARDVSDTVVVSELGPYHSLSANADVVTTTTGKVRGDSLNGTFEMRPAGGGNPIMSGNFRSKRVTP*
Ga0137377_108664891	3300012211	Vadose Zone Soil	GRSYRSASDTGTPFRIVTAVAQDGSLRGTMTYTSLTAPPVPVRAREVSDTVVVSELGPYHSLSANADVVTTTTGKVRGDSLNGTFEMRPAGGGNPIMSGNFRSKRVTP*
Ga0137370_103762701	3300012285	Vadose Zone Soil	TGTTWRIVTAVAPDGSLRGTMTYTSVTAPPVPIRARDVSDSAVVSELGPYHSIAANADVVTTTTGKVRGDSLNGTFEMRPAGGGNPIMSGNFRSKRVTT*
Ga0137370_106390941	3300012285	Vadose Zone Soil	APPVPIRARDVSDSAVVNELGPYHSIAANAEVVTIATGKVRGDSLNGTFEMRPAGGGNLVMTGNFRSKRVAP*
Ga0137387_112109382	3300012349	Vadose Zone Soil	GRSYRSASDTGIPFRIVTAVAQDGSLRGTMTYTSLTAPPVPVRAREVSDTVVVNELGPYHSLSANADVVTTTTGKLRGDSLNGTFVMRPAGGGNVIMTGNFRSKRVTP*
Ga0137384_108513051	3300012357	Vadose Zone Soil	QLGGPLIPIRVRQVTDTSLVSEIGPYHIPHANADVVTTTTGKVRDDSLNGTFEMRPASGGNPIMSGTFRTRRVTP*
Ga0137360_101683481	3300012361	Vadose Zone Soil	ASVTAPPVPIRARDVSDSAVVSELGPYHSITAKADVVTITTGKVRGDSLNGTFEMRPAAGGNAIMTGTFRSKRIAP*
Ga0137360_108558582	3300012361	Vadose Zone Soil	VTAVAPDGSLRGTLTYTSVTAPPVPIRARDVSDSAVVNEIGPYHSITANADVVTTTTGKVRGDSLNGTFEMRPAGGGNPIMTGNFRSKRVTP*
Ga0137360_111463462	3300012361	Vadose Zone Soil	VSDSAVVSELGPYHSITAKADVVTITTGKVRGDSLNGTFEMRPVAGGNTIMTGTFRSKRIAP*
Ga0137361_105767881	3300012362	Vadose Zone Soil	VTAVAPDGSLRGTMTYTSVTAPPVPIRARDVSDTAVVNELGPYHSIAANADVVTIATGKVRGDSLNGTFEMRPAAGGSPI
Ga0134049_13356991	3300012403	Grasslands Soil	VTAVAPDGSLRGTLTYTSVTAPPVPIRARDVSDSAVVNEIGPYHSITANADVVTTTTGKVRGDSLNGTFEMRPAGGGNVIMSGNFRSKRVVP*
Ga0137358_104167393	3300012582	Vadose Zone Soil	VVQDGSLRGTMTYPSVTAPPVPVRARDVSDSAVVSELGPYHSITAKADVVTITTGKVRGDSLNGTFEMRPAGGGNVIMTGTFGSKRVSP*
Ga0137398_106482202	3300012683	Vadose Zone Soil	VTAPPVPIRARDVSDTAVVSELGPYHSITAKLDVVTTTTGKLRGDSLNGTFEMRPAGGGNVIMSGNFRSKRVTP*
Ga0137396_100835264	3300012918	Vadose Zone Soil	WEGRSYRSASDTGTPWRIVTAVAPDGSLRGTMTYTSVTAPPVPIRARDVSDSAVVSELGPYYSIAAKADVVTITTGKVRGDSLNGTFEMRPAGGGNPIMTGNFRSKRVTP*
Ga0137416_108406541	3300012927	Vadose Zone Soil	PIRARDVSDSAVVNELGPYHSIAANADVVTITTGKVRGDSLNGTFEMRPAGGGNVIMTGNFRSKRVTP*
Ga0137416_114456101	3300012927	Vadose Zone Soil	TAPPVPIRARDVSDSAVVSELGPYHSIAANADVVTTTTGKLRGDSLNGIFEMRPAGGGNVIMSGNFRSKRVVP*
Ga0137416_116703392	3300012927	Vadose Zone Soil	GTPWRIVTAVAPDGSLRGTMTYTSVTAPPVPIRARDVSDSAVVSELGPYYSIAAKADVVTITTGKVRGDSLNGTFEMRPAGGGNPIMTGNFRSKRVTP*
Ga0137404_102699914	3300012929	Vadose Zone Soil	RGTMTYTSVTAPPVPIRARDVSDSAVVSELGPYHSITAKADVVTITTGKVRGDSLNGTFEMRPAAGGNTIMTGTFRSKRIAP*
Ga0137404_105075421	3300012929	Vadose Zone Soil	PPVPIRARDVSDTAVVNELGPYHSIAANADVVTNATGKVRGDSLNGTFEMRPAAGGNPIMTGNFRSKRVTP*
Ga0137407_100158906	3300012930	Vadose Zone Soil	MVTAVVQDGSLRGTMTYTSVNAPPVPIRTREVSDTVVVNELGPYHSIAANADVVTVATGKVRGDSLNGTFEMRPAAGGNAIMTGTFRSKRVAP*
Ga0137407_102888862	3300012930	Vadose Zone Soil	VTAVAPDGSLRGTMTYTSVTAPPVPIRARDVSDTAVVNELGPYHSIAANADVVTVATGKVRGDSLNGTFEMRPAAGGSPIMTGNFRSKRVTP*
Ga0137410_101414934	3300012944	Vadose Zone Soil	MTYTSLNAPPVPIRTRDVSDTVVVHELGPYHSVAANADVVTTTTGKVRGDSLNGTFEMRPAAGGNVIMSGNFRSKRVAP*
Ga0134077_101506822	3300012972	Grasslands Soil	MTYTSVTAPPVPIRTRDVSDTAVVHELGPYHSIAANADVVTIATGRVRGDSLNGTFEMRRADGGNVIMTGNFRSRRVTP*
Ga0134110_105981551	3300012975	Grasslands Soil	MTYTSVTAPPVPIRARDVSDSAVVNELGPYHSIAANADVVTVATGKVRGDSLNGTFEMRPAGGGNVIMSGNFRSKRVVP*
Ga0134076_104682462	3300012976	Grasslands Soil	VTAPPVPIRARDVSDSAVVNEIGPYHSITANADVVTTTTGKVRGDSLNGTFEMRPAGGGNVIMSGNFRSKRIVP*
Ga0164304_114211272	3300012986	Soil	AVVQDGSLRGTMTYTSVTAPPVPIRARDVSDSAVVNELGPYHSIVAKADVVTTATGRVRGDSLNGTFEMRPAGGGNVIMTGTFRSKRVVP*
Ga0134081_101929082	3300014150	Grasslands Soil	GRSFRSASDTGTPWRIVTAVAPDGSLRGTMTYTSVTAPPVPIRARDVSDSAVVNELGPYHSIAANADVVTTTRGKLRGDSLNGTFEMRPAGRGNVIMNGNFRSKRVTP*
Ga0134075_103437642	3300014154	Grasslands Soil	YTSVTAPPVPIRARDVSDSAVVNEIGPYHSIIANADVVTTTTGKVRGDSLNGTFEMRPAGGGNVIMSGNFRSKRVVP*
Ga0134075_104315732	3300014154	Grasslands Soil	TYTSVTAPPVPIRTRDVSDSAVVNEFGPYHSLAADKDVVTTTTGRVRGDSLNGTFEMRPAGGGNVMMSGTFRSKRVAP*
Ga0134078_101166873	3300014157	Grasslands Soil	TAVTQDGSLRGTLTYTSVTASPVPIRTREVSDTALVNELGPYHSLTADADVITTTIGKVRGDSLNGTFEMRPAGGGKPLMSGTFRSKRVAS*
Ga0134078_103248951	3300014157	Grasslands Soil	VTAVAPDGSLRGTMTYTSVTAPPVPIRTRDVSDTAVVHELGPYHSIVANADVVTLATGKVRGDSLNGTFEMRRVDGGNVIMTGNFRSRRVTP*
Ga0137411_11284061	3300015052	Vadose Zone Soil	RQVALLGWASAEVCRDMAWEGRSFRSASDTGTPWRIVTAVVQDGSLRGTMTYTSVTAPPVPIRARDVSDSAVVHELGPYHSIVAKADVVTTATGRLRGDSLNGTFEMRPAGGGNVIMTGTFRSKRVAP*
Ga0137420_12837291	3300015054	Vadose Zone Soil	RIPVSHGASSPPSCKMVVQDGSLRGTMTYTSVTAPPVPVRARDVSDSAVVSELGPYHSITAKADVVTITTGKVRGDSLNGTFEMRPAGGGNVIMTGTFGSKRVSP*
Ga0134073_101229022	3300015356	Grasslands Soil	MTYTSVTAPPVPIRARDVSDSAVVNELGPYHSIAANADVVTITRGKLRGDSLNGTFEMRPAGRGNVIMNGNFRSKRV
Ga0134089_100678154	3300015358	Grasslands Soil	TAVAPDGSLRGTLTYTSVTAPPVPIRARDVSDSAVVSELGPYHSITAKADVVTITTGKVRGDSLNGTFEMRPAAGGNTIMTGTFRSKRIAP*
Ga0134085_103519351	3300015359	Grasslands Soil	MAPDGSLRGTMTYTSVTAPPVPIRTRDVSDTAVVHELGPYHSIVANADVVTLATGKVRGDSLNGTFETRRVDGGNVIITG
Ga0134085_103893982	3300015359	Grasslands Soil	DGSLRGTLTYTSVTAPPVPIRARDVSDSAVVNEIGPYHSIIANADVVTTTTGKVRGDSLNGIFEMRPAGGGNVIMSGNFRSKRVVP*
Ga0134085_106146802	3300015359	Grasslands Soil	SAVVNEIGPYHSITANADVVTTTTGKVRGDSLNGTFEMRPAAGGNVIMSGNFRSKRVVP*
Ga0134074_10932151	3300017657	Grasslands Soil	VSDTVVVNELGPYHSLSANADVVTTTTGKLRGDSLNGTFVMRPAGGGNPIMSGNFRSKRVTP
Ga0134074_11091483	3300017657	Grasslands Soil	PVPIRTRDVSDTAVVHELGPYHSIVANADVVTLATGKVRGDSLNGTFEMRRVDGGNVIMTGNFRSRRVTP
Ga0134083_100782681	3300017659	Grasslands Soil	DSAVVNEIGPYHSITANADVVTTTTGKVRGDSLNGTFEMRPAGGGNVIMSGNFRSKRVVP
Ga0134083_103865371	3300017659	Grasslands Soil	VTAVTQDGSLRGTLTYTSVTASPVPIRTREVSDTALVNELGPYHSLTADADVITTTIGKVRGDSLNGTFEMRPAGGGKPLMSGTFRSKRVAS
Ga0134083_105981371	3300017659	Grasslands Soil	TSVTAPPVPIRTRDVSDSAVVNEFGPYHSLAADKDVVTIATGRVRGDSLNGTFEMRPAGGGNVMMSGTFRSKRVAP
Ga0066667_114773572	3300018433	Grasslands Soil	VSDTTLVNEIGPYQSPAAQRRVLTTTTGRLHGDSLNGTFDMRPADGGNAIMSGRFRSKRVVP
Ga0066669_101839624	3300018482	Grasslands Soil	SPVPIRTREVSDTALVNELGPYHSLTADADVITTTIGKVRGDSLNGTFEMRPAGGGKPLMSGTFRSKRVAS
Ga0193756_10463931	3300019866	Soil	VQDGSLRGTMTYTSVTAPPVPIRARDVSDSAVVNELGPYHSIVAKADVVTTATGRLRGDSLNGTFEMRPAGGGNVIMTGTFRSKRVAP
Ga0247678_10232913	3300024325	Soil	TVQAPPIPIRAREVSDTALVNEIGPYHSPTANADVVTRTTGKLRGDSLNGTFEMRPAAGGKAIMTGTFRTARVTP
Ga0207684_101321311	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SVTAPPVPIRARDVSDSAVVNELGPYHSIVAKADVVTTATGRVRGDSLNGTFEMRPAGGGNVIMTGTFRSKRVAP
Ga0207665_103719041	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VSDTALVNEIGPYHSPTANADVVTRTTGKLRGDSLNGTFEMRPAAGGKAIMTGTFRTARVTP
Ga0207665_114051782	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	TAVAPDGSLRGTMTYTSVTAPPVPIRARDVSDSAVVSELGPYHSIAANADVVTTTTGKLRGDSLNGTFEMRPAGGGNVIMAGNFRSKRVTP
Ga0209350_10615953	3300026277	Grasslands Soil	GTMTYTSVTAPPVPIRARDVSDSAVVNELGPYHSIAANAEVVTIATGKVRGDSLNGTFEMRPAGGGNLIMTGNFRSKRVAP
Ga0209350_11193492	3300026277	Grasslands Soil	TAPPVPIRARDVSDTAVVNELGPYHSIAANADVVTVATGKVRGDSLNGTFEMRPAAGGNPIMTGNFRSKRVTP
Ga0209234_10143815	3300026295	Grasslands Soil	DVSDSAVVNEIGPYHSIIANADVVTTTTGKVRGDSLNGTFEMRPAGGGNVIMSGNFRSKRVVP
Ga0209027_10076717	3300026300	Grasslands Soil	DVSDSAVVNEIGPYHSIIANADVVTTTTGKVRGDSLNGIFEMRPAGGGNVIMSGNFRSKRVVP
Ga0209688_10646911	3300026305	Soil	ALVNEIGPYQSPSAHRRVLTTTTGRLHGDSLNGTFEMRPAEGGNAIMSGTFRSKRVAP
Ga0209468_10046061	3300026306	Soil	VTAPPVPIRARDVSDSAVVNEIGPYHSITANADVVTTTTGKVRGDSLNGTFEMRPAGGGNVIMSGNFRSKRVVP
Ga0209468_11606712	3300026306	Soil	RIVTAVAQDGSLRGTMTYTSLTAPPVPVRAREVSDTVVVSELGPYHSLSANADVVTTTTGKVRGDSLNGTFEMRPAGGGNPIMSGNFRSKRVTP
Ga0209469_10433181	3300026307	Soil	RGTMTYTSLTAPPVPVRAREVSDTVVVSELGPYHSLSANADVVTTTTGKVRGDSLNGTFEMRPAGGGNPIMSGNFRSKRVTP
Ga0209469_11053892	3300026307	Soil	VTAPPVPIRARDVSDSAVVNEIGPYHSIIANADVVTTTTGKVRGDSLNGIFEMRPAGGGNVIMSGNFRSKRVVP
Ga0209055_11180041	3300026309	Soil	APPVPIRARDVSDSAVVNELGPYHSIAANAEVVTIATGKVRGDSLNGTFEMRPAGGGNLIMTGNFRSKRVAP
Ga0209268_11662072	3300026314	Soil	IPVRARQVSDTALVNEIGPYQSPSAHRRVLTTTTGRLHGDSLNGTFEMRPAEGGNAIMSGTFRSKRVAP
Ga0209154_10784654	3300026317	Soil	FPQVPEPPIPVRARQVSDTALVNEIGPYQSPSAHRRVLTTTTGRLHGDSLNGTFEMRPVEGGNAIMSGTFRSKRVVP
Ga0209472_10222041	3300026323	Soil	APPVPIRARDVSDSAVVNEIGPYHSIIANADVVTTTTGKVRGDSLNGIFEMRPAGGGNVIMSGNFRSKRVVP
Ga0209266_10749314	3300026327	Soil	DTALVNELGPYHSLTADADVITTTIGKVRGDSLNGTFEMRPAGGGKPLMSGTFRSKRVAS
Ga0209802_10841571	3300026328	Soil	WRIVTAVAPDGSLRGTMTYTSVTAPPVPIRTRDVSDTAVVHELGPYHSIVANADVVTLATGKVRGDSLNGTFEMRRVDGGNVIMTGNFRSRRVTP
Ga0209803_12173322	3300026332	Soil	APDGSLRGTLTYTSVTAPPVPIRARDVSDSAVVNEIGPYHSITANADVVTTTTGKVRGDSLNGTFEMRPAGGGNVIMSGNFRSKRVVP
Ga0209159_10470234	3300026343	Soil	FRSASDSGIPWRIVTAVTQDGSLRGTLTYTSVTASPVPIRTREVSDTALVNELGPYHSLTADADVITTTIGKVRGDSLNGTFEMRPAGGGKPLMSGTFRSKRVAS
Ga0209159_11088443	3300026343	Soil	PVPVRAREVSDTVVVSELGPYHSLSANADVVTTTTGKVRGDSLNGTFEMRPAGGGNPIMSGNFRSKRVTP
Ga0209690_10476351	3300026524	Soil	YRSASDTGTPWRIVTAVAPDGSLRGTMTYTSVTAPPVPIRTRDVSDTAVVHELGPYHSIVANADVVTLATGKVRGDSLNGTFEMRRVDGGNVIMTGNFRSRRVTP
Ga0209690_12325302	3300026524	Soil	DTAVVNELGPYHSIAANADVVTIATGKVRGDSLNGTFEMRPAAGGSPIMTGNFRSKRVTP
Ga0209059_12124821	3300026527	Soil	FPQVPEPPIPVRARQVSDTALVNEIGPYQSPSAHRRVLTTTTGRLHGDSLNGTFEMRPAEGGNAIMSGTFRSKRVAP
Ga0209056_1001082011	3300026538	Soil	DTGIPFRIVTAVAQDGSLRGTMTYTSLTAPPVPVRAREVSDTVVVSELGPYHSLSANADVVTTTTGKVRGDSLNGTFEMRPAGGGNPIMSGNFRSKRVTP
Ga0209376_12030023	3300026540	Soil	WEGRSYRSASDTGTPWRIVTAMAPDGSLRGTMTYTSVTAPPVPIRTRDVSDTAVVHELGPYHSIVANADVVTLATGKVRGDSLNGTFETRRVDGGNVIITGNFRSRRVTP
Ga0209376_13912882	3300026540	Soil	GTLTYTSVTASPVPIRTREVSDTALVNELGPYHSLTADADVITTTIGKVRGDSLNGTFEMRPAGGGKPLMSGTFRSKRVAS
Ga0209805_100268410	3300026542	Soil	VPEPPSPVRGRQVSDTALVNEIGPYQSPSAHRRVLTTTTGRLHGDSLNGTFEMRPAEGGNAIMSGTFRSKRVAP
Ga0209474_107114342	3300026550	Soil	NELGPYHSLTADADVITTTIGKVRGDSLNGTFEMRPAGGGKPLMSGTFRSKRVAS
Ga0209074_101929401	3300027787	Agricultural Soil	TALVNEIGPYHSPTANADVVTRTTGKLRGDSLNGTFEMRPAAGGNAIMTGTFRTARVTP
Ga0209488_100536585	3300027903	Vadose Zone Soil	TSVTAPPVPIRARDVSDSAVVSELGPYHSIAANADVVTTTTGKLRGDSLNGIFEMRPAGGGNVIMSGNFRSKRVVP
Ga0137415_106217663	3300028536	Vadose Zone Soil	SLRGTMTYTSVTAPPVPIRARDVSDSAVVNELGPYHSIVAKADVVTTATGRLRGDSLNGTFEMRPAGGGNVIMTGTFRSKRVAP
Ga0307290_103665541	3300028791	Soil	DTSAVDEIGPYHSPTANQDVVTTTTGKLRGDSLNGTFEMRPAGGGTAIMTGTFRSQRVAR
Ga0307296_103843531	3300028819	Soil	EGPPIPIRGRQVTDTSAVDEIGPYHSPTANQDVVTTTTGKLRGDSLNGTFEMRPAGGGTAIMTGTFRSQRVAR
Ga0307278_104923391	3300028878	Soil	VPIRARDVSDSAVVNELGPYHSIVAKADVVTTATGRVRGDSLNGTFEMRPAGGGNVIMTGTFRSKRVAP
Ga0307308_103900012	3300028884	Soil	TDTSAVDEIGPYHSPTANQDVVTTTTGKLRGDSLNGTFEMRPAGGGTAIMTGTFRSQRVA
Ga0307501_102198101	3300031152	Soil	SLRGTLTYTSVTAPPVPIRARDVSDSAVVQELGPYHSITAGADVVTIATGKVRGDSLNGTFEMRPAAGGNAIMSGNFRSKRVTP
Ga0307469_101553441	3300031720	Hardwood Forest Soil	TGTPWRIVTAVVQDGSLRGTMTYTSVTAPPVPIRARDVSDSAVVNELGPYHSIVAKADVVTTATGRVRGDSLNGTFEMRPAGGGNVIMTGTFRSKRVAP
Ga0307468_1011690362	3300031740	Hardwood Forest Soil	ALVNEIGPYHSPTANADVVTRTTGKLRGDSLNGTFEMRPAAGGNAIMTGTFRTARVTP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F040292

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences