NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F040162

Metagenome / Metatranscriptome Family F040162

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F040162
Family Type Metagenome / Metatranscriptome
Number of Sequences 162
Average Sequence Length 47 residues
Representative Sequence MHIPLVIAVLAFLAFALLPVLDRSASSEINAKGLRYYLIRIARWTKE
Number of Associated Samples 71
Number of Associated Scaffolds 161

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 92.59 %
% of genes near scaffold ends (potentially truncated) 15.43 %
% of genes from short scaffolds (< 2000 bps) 93.21 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (55.556 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands
(32.716 % of family members)
Environment Ontology (ENVO) Unclassified
(27.160 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(53.086 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 58.67%    β-sheet: 0.00%    Coil/Unstructured: 41.33%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 161 Family Scaffolds
PF12732YtxH 21.12
PF13282DUF4070 18.63
PF05239PRC 9.94
PF13451zf-trcl 8.07
PF07311Dodecin 7.45
PF02559CarD_CdnL_TRCF 4.97
PF04226Transgly_assoc 1.86
PF00072Response_reg 1.24
PF02310B12-binding 1.24
PF07883Cupin_2 0.62
PF05532CsbD 0.62
PF00781DAGK_cat 0.62
PF06210DUF1003 0.62
PF00196GerE 0.62
PF04909Amidohydro_2 0.62
PF06480FtsH_ext 0.62
PF01569PAP2 0.62
PF10387DUF2442 0.62

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 161 Family Scaffolds
COG3360Flavin-binding protein dodecinGeneral function prediction only [R] 7.45
COG2261Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein familyGeneral function prediction only [R] 1.86
COG1597Phosphatidylglycerol kinase, diacylglycerol kinase familyLipid transport and metabolism [I] 1.24
COG0465ATP-dependent Zn proteasesPosttranslational modification, protein turnover, chaperones [O] 0.62
COG3237Uncharacterized conserved protein YjbJ, UPF0337 familyFunction unknown [S] 0.62
COG4420Uncharacterized membrane proteinFunction unknown [S] 0.62

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms55.56 %
UnclassifiedrootN/A44.44 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001213|JGIcombinedJ13530_102630573All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium509Open in IMG/M
3300001213|JGIcombinedJ13530_104178210All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG2_30_64_16744Open in IMG/M
3300001213|JGIcombinedJ13530_105368936Not Available922Open in IMG/M
3300001213|JGIcombinedJ13530_106326474All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium617Open in IMG/M
3300001213|JGIcombinedJ13530_106790515All Organisms → cellular organisms → Bacteria942Open in IMG/M
3300001213|JGIcombinedJ13530_108577452All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG2_30_64_16837Open in IMG/M
3300003432|JGI20214J51088_10474121All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi818Open in IMG/M
3300004049|Ga0055493_10028083Not Available956Open in IMG/M
3300004066|Ga0055484_10168600Not Available584Open in IMG/M
3300004481|Ga0069718_14604369All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium603Open in IMG/M
3300004481|Ga0069718_16340855All Organisms → cellular organisms → Bacteria1378Open in IMG/M
3300006224|Ga0079037_100660013Not Available1019Open in IMG/M
3300006224|Ga0079037_101723178All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium626Open in IMG/M
3300006224|Ga0079037_102054675Not Available571Open in IMG/M
3300009037|Ga0105093_10751489Not Available563Open in IMG/M
3300009075|Ga0105090_10206379Not Available1216Open in IMG/M
3300009075|Ga0105090_10411625All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300009081|Ga0105098_10076792All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium1406Open in IMG/M
3300009082|Ga0105099_10817768Not Available584Open in IMG/M
3300009091|Ga0102851_11019847Not Available901Open in IMG/M
3300009091|Ga0102851_12183449Not Available630Open in IMG/M
3300009111|Ga0115026_11050017All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi654Open in IMG/M
3300009111|Ga0115026_11072807Not Available648Open in IMG/M
3300009111|Ga0115026_11867148All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetes bacterium HGW-Planctomycetes-1511Open in IMG/M
3300009131|Ga0115027_10190891All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG2_30_64_161296Open in IMG/M
3300009131|Ga0115027_11056446Not Available640Open in IMG/M
3300009146|Ga0105091_10406364Not Available679Open in IMG/M
3300009153|Ga0105094_10749637Not Available573Open in IMG/M
3300009166|Ga0105100_10646348All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300009166|Ga0105100_10866998Not Available562Open in IMG/M
3300009167|Ga0113563_11066361All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300009167|Ga0113563_11509105Not Available792Open in IMG/M
3300009167|Ga0113563_12713160All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300009169|Ga0105097_10378051All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300009169|Ga0105097_10561454Not Available641Open in IMG/M
3300009169|Ga0105097_10774060Not Available546Open in IMG/M
3300009170|Ga0105096_10267704Not Available869Open in IMG/M
3300009179|Ga0115028_10141175Not Available1443Open in IMG/M
3300009455|Ga0114939_10045842Not Available1903Open in IMG/M
3300009504|Ga0114946_10066642All Organisms → cellular organisms → Bacteria2040Open in IMG/M
3300009580|Ga0115596_1005083All Organisms → cellular organisms → Bacteria869Open in IMG/M
3300009580|Ga0115596_1150085Not Available538Open in IMG/M
3300009586|Ga0115591_1048689All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium573Open in IMG/M
3300009652|Ga0123330_1021984All Organisms → cellular organisms → Bacteria3303Open in IMG/M
3300009755|Ga0115592_1017443All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium550Open in IMG/M
3300009773|Ga0123333_10029454All Organisms → cellular organisms → Bacteria3427Open in IMG/M
3300009773|Ga0123333_10105199All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium1366Open in IMG/M
3300010131|Ga0115594_1165004Not Available664Open in IMG/M
3300010131|Ga0115594_1174310All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300010131|Ga0115594_1212069Not Available549Open in IMG/M
3300010138|Ga0115595_1012358All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG2_30_64_16686Open in IMG/M
3300010138|Ga0115595_1135599All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG2_30_64_161125Open in IMG/M
3300010138|Ga0115595_1234522All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300010144|Ga0115593_1293029Not Available590Open in IMG/M
3300011340|Ga0151652_12008561All Organisms → cellular organisms → Bacteria1277Open in IMG/M
3300011340|Ga0151652_14065905All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium792Open in IMG/M
3300012931|Ga0153915_10807620All Organisms → cellular organisms → Bacteria1088Open in IMG/M
3300012931|Ga0153915_11350672Not Available833Open in IMG/M
3300012964|Ga0153916_10907524Not Available962Open in IMG/M
3300013078|Ga0153914_1104633Not Available860Open in IMG/M
3300013078|Ga0153914_1198537Not Available692Open in IMG/M
3300013080|Ga0153913_1079110All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium767Open in IMG/M
3300013080|Ga0153913_1138435All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium941Open in IMG/M
3300013080|Ga0153913_1269812Not Available579Open in IMG/M
3300013080|Ga0153913_1324108Not Available511Open in IMG/M
3300013080|Ga0153913_1365437All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium786Open in IMG/M
3300013080|Ga0153913_1495054All Organisms → cellular organisms → Bacteria2643Open in IMG/M
3300013080|Ga0153913_1520687All Organisms → cellular organisms → Bacteria1117Open in IMG/M
3300013232|Ga0170573_10692219All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300013232|Ga0170573_11080095All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1623Open in IMG/M
3300013315|Ga0173609_10358152All Organisms → cellular organisms → Bacteria1830Open in IMG/M
3300014266|Ga0075359_1143787Not Available529Open in IMG/M
3300014316|Ga0075339_1021352All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi1534Open in IMG/M
3300021075|Ga0194063_10046372All Organisms → cellular organisms → Bacteria2084Open in IMG/M
3300022185|Ga0079039_1001326All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG2_30_64_161880Open in IMG/M
3300022185|Ga0079039_1018189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG2_30_64_16913Open in IMG/M
3300022185|Ga0079039_1028220All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium658Open in IMG/M
3300022185|Ga0079039_1043793Not Available504Open in IMG/M
3300022185|Ga0079039_1044694All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium663Open in IMG/M
3300022185|Ga0079039_1060999Not Available616Open in IMG/M
3300022185|Ga0079039_1061170All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium570Open in IMG/M
3300022185|Ga0079039_1062055Not Available702Open in IMG/M
3300022185|Ga0079039_1089821Not Available751Open in IMG/M
3300022185|Ga0079039_1100243All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG2_30_64_161042Open in IMG/M
3300022185|Ga0079039_1104888Not Available1045Open in IMG/M
3300022185|Ga0079039_1106229Not Available798Open in IMG/M
3300022185|Ga0079039_1106720Not Available2560Open in IMG/M
3300022185|Ga0079039_1106720Not Available2560Open in IMG/M
3300022185|Ga0079039_1146642All Organisms → cellular organisms → Bacteria1184Open in IMG/M
3300022185|Ga0079039_1155381All Organisms → cellular organisms → Bacteria1003Open in IMG/M
3300022185|Ga0079039_1178290All Organisms → cellular organisms → Bacteria3063Open in IMG/M
3300022185|Ga0079039_1236606Not Available770Open in IMG/M
3300022185|Ga0079039_1246806Not Available546Open in IMG/M
3300022185|Ga0079039_1272133All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium545Open in IMG/M
3300022185|Ga0079039_1286161All Organisms → cellular organisms → Bacteria1591Open in IMG/M
3300022185|Ga0079039_1342222Not Available2003Open in IMG/M
3300022185|Ga0079039_1408204Not Available533Open in IMG/M
3300022185|Ga0079039_1418789All Organisms → cellular organisms → Bacteria1257Open in IMG/M
3300022185|Ga0079039_1438312Not Available706Open in IMG/M
3300022185|Ga0079039_1444790All Organisms → cellular organisms → Bacteria1290Open in IMG/M
3300022185|Ga0079039_1450910Not Available637Open in IMG/M
3300022185|Ga0079039_1471652Not Available1092Open in IMG/M
3300022185|Ga0079039_1495354Not Available788Open in IMG/M
3300022185|Ga0079039_1507688All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG2_30_64_161658Open in IMG/M
3300022185|Ga0079039_1545988Not Available517Open in IMG/M
3300022185|Ga0079039_1553638All Organisms → cellular organisms → Bacteria1917Open in IMG/M
3300022185|Ga0079039_1614270All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium795Open in IMG/M
3300022185|Ga0079039_1626245All Organisms → cellular organisms → Bacteria1897Open in IMG/M
3300022185|Ga0079039_1639297Not Available619Open in IMG/M
3300022185|Ga0079039_1650061Not Available879Open in IMG/M
3300025130|Ga0209594_1121837Not Available782Open in IMG/M
3300025135|Ga0209498_1164954All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium829Open in IMG/M
3300026255|Ga0209613_1184101All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium518Open in IMG/M
3300027693|Ga0209704_1069431Not Available981Open in IMG/M
3300027841|Ga0209262_10224690All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300027871|Ga0209397_10097501Not Available1225Open in IMG/M
3300027877|Ga0209293_10043120All Organisms → cellular organisms → Bacteria1805Open in IMG/M
3300027885|Ga0209450_10493203All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium896Open in IMG/M
3300027885|Ga0209450_10740916Not Available712Open in IMG/M
3300027885|Ga0209450_10830208All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium665Open in IMG/M
3300027885|Ga0209450_11156672Not Available540Open in IMG/M
3300027887|Ga0208980_10137303All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG2_30_64_161433Open in IMG/M
3300027890|Ga0209496_10196144Not Available957Open in IMG/M
3300027897|Ga0209254_10122277All Organisms → cellular organisms → Bacteria2160Open in IMG/M
3300027897|Ga0209254_10148182Not Available1925Open in IMG/M
3300027897|Ga0209254_10204507All Organisms → cellular organisms → Bacteria1575Open in IMG/M
3300027897|Ga0209254_10834836All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300027900|Ga0209253_10137694Not Available1984Open in IMG/M
3300027900|Ga0209253_10780628All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi681Open in IMG/M
3300027972|Ga0209079_10212379Not Available661Open in IMG/M
(restricted) 3300028581|Ga0247840_10052087All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales3187Open in IMG/M
(restricted) 3300029286|Ga0247841_10331824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG2_30_64_161032Open in IMG/M
3300031997|Ga0315278_11214949Not Available739Open in IMG/M
3300032143|Ga0315292_10633548All Organisms → cellular organisms → Bacteria → Terrabacteria group900Open in IMG/M
3300032143|Ga0315292_11259489Not Available606Open in IMG/M
3300032164|Ga0315283_10710872All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium1082Open in IMG/M
3300032164|Ga0315283_11209381All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium788Open in IMG/M
3300032164|Ga0315283_11369239All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300032164|Ga0315283_11575026Not Available670Open in IMG/M
3300032177|Ga0315276_10610008All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → unclassified Anaerolineae → Anaerolineae bacterium CG2_30_64_161173Open in IMG/M
3300032397|Ga0315287_10684515All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium1211Open in IMG/M
3300032516|Ga0315273_12670153Not Available570Open in IMG/M
3300033408|Ga0316605_10767662All Organisms → cellular organisms → Bacteria → Terrabacteria group914Open in IMG/M
3300033408|Ga0316605_11206394Not Available731Open in IMG/M
3300033408|Ga0316605_12447488Not Available508Open in IMG/M
3300033413|Ga0316603_11232437All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300033416|Ga0316622_100512329All Organisms → cellular organisms → Bacteria1368Open in IMG/M
3300033416|Ga0316622_101598533All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300033416|Ga0316622_102512102Not Available594Open in IMG/M
3300033416|Ga0316622_103125473All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium525Open in IMG/M
3300033418|Ga0316625_100118244All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium1551Open in IMG/M
3300033418|Ga0316625_101198749All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi695Open in IMG/M
3300033481|Ga0316600_11281122Not Available521Open in IMG/M
3300033485|Ga0316626_10651097All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300033487|Ga0316630_10280437All Organisms → cellular organisms → Bacteria1274Open in IMG/M
3300033521|Ga0316616_100698047Not Available1214Open in IMG/M
3300033521|Ga0316616_100861277All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium1112Open in IMG/M
3300033521|Ga0316616_101964513All Organisms → cellular organisms → Bacteria → Terrabacteria group774Open in IMG/M
3300033521|Ga0316616_102946487Not Available641Open in IMG/M
3300033521|Ga0316616_103074168Not Available629Open in IMG/M
3300033521|Ga0316616_104111766Not Available548Open in IMG/M
3300033557|Ga0316617_100711724All Organisms → cellular organisms → Bacteria950Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands32.72%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland12.35%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil12.35%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment9.26%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment6.17%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment6.17%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland4.94%
Anaerobic Biogas ReactorEngineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor2.47%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.85%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment1.23%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment1.23%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.23%
WetlandEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland1.23%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater1.23%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.23%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.23%
SedimentEngineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment1.23%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater0.62%
FreshwaterEnvironmental → Aquatic → Freshwater → Pond → Sediment → Freshwater0.62%
SedimentEngineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment0.62%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300003432Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 BulkEnvironmentalOpen in IMG/M
3300004049Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D2EnvironmentalOpen in IMG/M
3300004066Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D2EnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300006224Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaGEnvironmentalOpen in IMG/M
3300009037Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015EnvironmentalOpen in IMG/M
3300009075Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015EnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009082Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009111Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1EnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009153Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009166Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009169Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015EnvironmentalOpen in IMG/M
3300009170Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009179Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1EnvironmentalOpen in IMG/M
3300009455Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal SpringEnvironmentalOpen in IMG/M
3300009504Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep SedimentEnvironmentalOpen in IMG/M
3300009580Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_11_14_C (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009586Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_11_14_A (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009652Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C13 SIP DNAEngineeredOpen in IMG/M
3300009755Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_11_14_B (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009773Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C12 SIP DNAEngineeredOpen in IMG/M
3300010131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_11_14_A (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010138Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_11_14_B (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010144Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_11_14_C (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011340Combined Assembly of Wetland MetatranscriptomesEnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300013078Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013080Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013232Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA ? S1EngineeredOpen in IMG/M
3300013315Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1BEngineeredOpen in IMG/M
3300014266Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleB_D1EnvironmentalOpen in IMG/M
3300014316Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D1EnvironmentalOpen in IMG/M
3300021075Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L373-20mEnvironmentalOpen in IMG/M
3300022185Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025130Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring (SPAdes)EnvironmentalOpen in IMG/M
3300025135Lake sediment microbial communities from Walker lake, Nevada to study Microbial Dark Matter (Phase II) - Walker Lake 11/02/13 Deep Sediment (SPAdes)EnvironmentalOpen in IMG/M
3300026255Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_A C13 SIP DNA (SPAdes)EngineeredOpen in IMG/M
3300027693Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027841Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)EnvironmentalOpen in IMG/M
3300027871Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027877Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027885Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)EnvironmentalOpen in IMG/M
3300027887Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 BulkEnvironmentalOpen in IMG/M
3300027890Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027897Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300027972Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300028581 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_17mEnvironmentalOpen in IMG/M
3300029286 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_18mEnvironmentalOpen in IMG/M
3300031997Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0EnvironmentalOpen in IMG/M
3300032143Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0EnvironmentalOpen in IMG/M
3300032164Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0EnvironmentalOpen in IMG/M
3300032177Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032516Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0EnvironmentalOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M
3300033413Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCTEnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033481Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CTEnvironmentalOpen in IMG/M
3300033485Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_AEnvironmentalOpen in IMG/M
3300033487Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_AEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ13530_10263057323300001213WetlandMDIRLIIAILAFLAFALLPVLDQFANSNITAKGMRSYLIRIARWVNE*
JGIcombinedJ13530_10417821023300001213WetlandMHIPLAIAVLAVLAFMLLPMLDRPTASEINATGLRAYWFRIARWSKR*
JGIcombinedJ13530_10536893623300001213WetlandMHIPLVIAILACLALMLLPVLDRYARPEINAMTPRSRLVRLARWAKD*
JGIcombinedJ13530_10632647423300001213WetlandMDIRLIIAILAFLGFALLPVLDQFAKSELRDKGMHSYLVRIARWVNQ*
JGIcombinedJ13530_10679051533300001213WetlandMDIPLVIATLAFLALALLPVLDRSASSEIHGKGLRTYLIRIARWTKE*
JGIcombinedJ13530_10857745233300001213WetlandMDILLVIAVLAFLSLALLPVLDRFANSEFKAKGLGSYLIRIARWTKD*
JGI20214J51088_1047412113300003432WetlandMHIPFIIAILAFLALVLLPALDRTTGSEVXAXGLRXYWVRVARWAXG*
Ga0055493_1002808323300004049Natural And Restored WetlandsMHVPLVLAILAFLALMLLPVLDRVASSEIDAEGVRSHLIRVARWTKE*
Ga0055484_1016860023300004066Natural And Restored WetlandsMHIPLIIAVLVFLAFALLPVLDRPTGSEISATGPRAYWFRIARWSKK*
Ga0069718_1460436913300004481SedimentMHVSVVIAILAFLALVLLPVLDRSANSQIAAKDLRTYLIRVARWTKE*
Ga0069718_1634085523300004481SedimentMDIRLVIAVLAFLTLAMLPVLDRFASSETNAKGARSYLIRIARWTKE*
Ga0079037_10066001313300006224Freshwater WetlandsMDIRLVIAVLAFLTLAMLPVLDRFASSEINAKGLRSYLIR
Ga0079037_10172317823300006224Freshwater WetlandsMHIPLAIAILAFLVFALLPVLDRSASSEINAEGLRYYLIRIARWTNE*
Ga0079037_10205467523300006224Freshwater WetlandsMHLPLVIAVLALLAFALLPVLDRSASPETNAKGLRAYLIRIARWAKE*
Ga0105093_1075148923300009037Freshwater SedimentHIPLVIAILAFLAFALLPVQDRFAALEIDAESLRSHLIRLARWTKE*
Ga0105090_1020637933300009075Freshwater SedimentMHIPFAIAVLALLAFALLPVLDRSANSRINAPRLRTYWIRVARWVKE*
Ga0105090_1041162533300009075Freshwater SedimentMHIPLVISILALLAFALLPVLDRSANSKINGPGPRAYWNRVARWVKE*
Ga0105098_1007679233300009081Freshwater SedimentMHIPLAIAVLALLAFALLPVLDRSANSRINAPRLRTYWIRVARWVKE*
Ga0105099_1081776813300009082Freshwater SedimentMHIPLVIAILAFLALMLLPLLDRSASSEINAKGLRSYLIRVARWTKE*
Ga0102851_1101984723300009091Freshwater WetlandsMHIPLVIALLAFLAFALLPVLDRSATSEVDAKGLHAYLIR
Ga0102851_1218344913300009091Freshwater WetlandsMHIPLVIAILAVLALALLPVLDGSASSEINAKVPRAYLIRIARWTKE*
Ga0115026_1105001723300009111WetlandMSTTVDTRLVIAILAFLTLAMLPVLDRFASAEINAKGLRSYLIRIARWTKE*
Ga0115026_1107280723300009111WetlandMDIPLVIAVVAVLALALLPVLDRAASSEINAKGLRAYVIRIARWTKE*
Ga0115026_1186714813300009111WetlandMDIRLVIAVLAFLTLMMLPVLDRFASSEINARGLRSYLIRIARWTKE
Ga0115027_1019089143300009131WetlandMHIPFAIAVLALLAFALLPVLDRSANFRINAPGLRTYWIRVARWVKE*
Ga0115027_1105644623300009131WetlandMHIPLVIAILAVLALALLPVLDRSVSSEISAKGPRVYLIRIARWTKE*
Ga0105091_1040636443300009146Freshwater SedimentAFLALTLLPVLDRSASSEIDVKGLRAYVIRVARWAKE*
Ga0105094_1074963723300009153Freshwater SedimentMHIPLVIAILAFLAFALLPVLDRFAALEIDAESLRSHLIRLARWTKE*
Ga0105100_1064634813300009166Freshwater SedimentNRSNTMHLPLVLAVLACLTLVLLPVLDRSANSEVNGKHLRTHWIRLARWVQD*
Ga0105100_1086699823300009166Freshwater SedimentMHIPLGIAVLALLALVLLPVLDRSTNSDIDAKAPRSYLIRIARWTKE*
Ga0113563_1106636123300009167Freshwater WetlandsVDTRLVIAILAFLTLAMLPVLDRFASAEINAKGLRSYLIRIARWTKE*
Ga0113563_1150910523300009167Freshwater WetlandsMHIPLFIAILAVLALALLLVLDGSASSESNAKGLRVYLIRIARWTKE*
Ga0113563_1271316033300009167Freshwater WetlandsVTMHIPFAIAVLALLAFALLPVLDRSANFRINVPGLRTYWIRVARWVKE*
Ga0105097_1037805113300009169Freshwater SedimentMHIPLVIAILAVLAFALLPVLDRSAASKINAPGPRAHWIRVARWAKE*
Ga0105097_1056145413300009169Freshwater SedimentIPLAITVLAFLAFALLPVLDRSANFRINAPGLRTYWIRVARWVKE*
Ga0105097_1077406023300009169Freshwater SedimentMTMHIPLGLAILALLAFALLPVLDRSAASRIDASGLRAYWNRVARSVRE*
Ga0105096_1026770433300009170Freshwater SedimentMHIPLVISILALLAFALLPVLDRSANSKVNGPGPRAHWIRVARWAKE*
Ga0115028_1014117513300009179WetlandMDIRLVIAVLAFLTLALLPALDRIADTEFKVKGLRSYLIRVARWTKE*
Ga0114939_1004584223300009455GroundwaterMHVPLVLAILAFLALMLLPVLDQVASSEIDAEGVRSHLLRVARWTKE*
Ga0114946_1006664243300009504SedimentMHIPLIIAALAFLALVLLPVLDRSVNSEINAKDLRGYLIRLARWTQE*
Ga0115596_100508333300009580WetlandMHIPFAIAVLALLAFALLPVLDRSANFRINVPGLRTYWIRVARWVKE*
Ga0115596_115008513300009580WetlandMHIPLIIAILAVLTLALLPVLDRFVSSEISAKGLRVYLIRVARWTKE*
Ga0115591_104868923300009586WetlandMHVPLIIAVLALLAFALLPALDRSASSVGAKGVRAYVARIARWVKE*
Ga0123330_102198423300009652Anaerobic Biogas ReactorMHIPLVIAILAFLALVLLPVLDRSARSENTTKDLRTYLIRIASWTKE*
Ga0115592_101744323300009755WetlandMHFPLIIAMLACLILVLLPVLDHFANSEINGKQPDPLLIRLARWAQE*
Ga0123333_1002945453300009773Anaerobic Biogas ReactorMHIPLVIAILAFLALLLLPVPDRSARSENTTKDLRTYLIRIASWTKE*
Ga0123333_1010519923300009773Anaerobic Biogas ReactorMHIPLVIAILAFLALVLLPVLDRSASSEITTKDLRTYLIRIASWTKE*
Ga0115594_116500413300010131WetlandMHIPLVIAILAVLALVLLPVLDRATSSEINAKGLRVYLIRIARWTKE*
Ga0115594_117431033300010131WetlandMHIPFAIAVLALLAFALLPVLDRSSNSKINAPRLRTYWIRVARWVKE*
Ga0115594_121206923300010131WetlandVHVPLIVAILAFLALALLPVLDRSANSEIAAKGVRAYVNRLARWTKE*
Ga0115595_101235813300010138WetlandMSTTMHIPLAIAILAFLVFALLPVLDRSASSEINAEGLRYYLIRIARWTKE*
Ga0115595_113559913300010138WetlandMHIPFAIAVLALLAFALLPVLDRSANFRINVPGLRTYW
Ga0115595_123452213300010138WetlandMHIPLAIAVLAFLAFALLPVLDRSANFRINAPGLRTYWIRVARWVKE*
Ga0115593_129302913300010144WetlandMHIPLVIAVLACLALVLLPALDRYARSEINAKYPRSYLIRLARWAKD*
Ga0151652_1200856113300011340WetlandMDIPLVIAVVALLALALLPVLDRAASSEINAKGLRAQLIRIARWTKE*
Ga0151652_1406590533300011340WetlandMHVPFVIAILACLALMLLPVLDRYASPEINAMTPRSRLVRLARWAKD*
Ga0153915_1080762023300012931Freshwater WetlandsMDIPLVIAILAFLSLALLPVLDRFANSEFNAKGVRSYLIRIARWTKE*
Ga0153915_1135067213300012931Freshwater WetlandsMHIPLAIAVLAFLAFALLPVLDSSASSEINAKGLRAYLIRIARWTKE*
Ga0153916_1090752413300012964Freshwater WetlandsMDTPLIIAILAFLTLALLPVLDRFANSEFNAKGVRSYLIRIARWTKE*
Ga0153914_110463313300013078Freshwater WetlandsVHIPLVIAVLAVLALALLPVLDRSASSEINAKGLRAHLIRIARWTKE*
Ga0153914_119853723300013078Freshwater WetlandsMDTPLIIAILAFLTLALLPVLDRFANSELNAKGVRSYLIRIARWANE*
Ga0153913_107911023300013080Freshwater WetlandsMHIPLVIAILAFLALALLPVLDRSASSEINTKGLRFYLIRIARWAKE*
Ga0153913_113843513300013080Freshwater WetlandsMHIPLVIAILASSAYALLPVLDRAASSEIKAKGPRSYLIRVARG
Ga0153913_126981223300013080Freshwater WetlandsMDIPLVIAVVALLALALLPVLDRAASSEINPKGLRAHLIRIARWTKE*
Ga0153913_132410813300013080Freshwater WetlandsMHIPFVIAILASLAYALLPVLDRAASSEINAKGPRSYLIRVARWTNE*
Ga0153913_136543733300013080Freshwater WetlandsVHIPLVIAVLAFLALALLPVLDRFVSSEINAKGLRSSLI
Ga0153913_149505443300013080Freshwater WetlandsMHIPLVIAVLAFLAFALLPVLDRSASSEINAKGLRYYLIRIARWTKE*
Ga0153913_152068713300013080Freshwater WetlandsMDIPLVIAILAFLTLTLLPVLDCSARSEINAKGLRSYLIRIARWTKE*
Ga0170573_1069221913300013232SedimentMHIPLVISILALLAFALLPALDLTTGSEVHVKGLRGYWVRVARWAKA*
Ga0170573_1108009523300013232SedimentMHIPLAIAVLALLAFALLPALDRTTGSEVNAKGLRVYWVRVARWAKG*
Ga0173609_1035815243300013315SedimentMHIPLVIAVLAFLAFALLPVLDRTAGSEVNAKGLRAYWIRVARWAKG*
Ga0075359_114378723300014266Natural And Restored WetlandsMHIPLIIAVLAFLAFALLPALDRTTGSEVNAKGLRGYWIRVARWARG*
Ga0075339_102135253300014316Natural And Restored WetlandsMHIPLIIAVLAFLAFALLPVLDRPTGSEINAAGLRAYWFRIARWSKK*
Ga0194063_1004637253300021075Anoxic Zone FreshwaterMHLPLVIAILAFLAFMLLPVLDLSPMSEIHPKGVRAFWVRIARWAKG
Ga0079039_100132643300022185Freshwater WetlandsMDIPFIIASLALLAFVLLPVLDRLAGSEINATGPRAYWLRIARWVNE
Ga0079039_101818933300022185Freshwater WetlandsMHIPLAIAIMALLVFMLLPMLDRPTGAEINAAGLRAYWVRIARWSKK
Ga0079039_102822013300022185Freshwater WetlandsMHIPLVIAILAFLAFALLPVLDRSASSEINPKGLRAYLIRITRWTKE
Ga0079039_104379323300022185Freshwater WetlandsMHIPLVIAILAFLAFALLPVLDRYASSGINAKGLRYYLIRIARWAQE
Ga0079039_104469423300022185Freshwater WetlandsMDFPLVIAILAVLAFALLAVLDRFASAEIATKGLRSYLIRIARWTQE
Ga0079039_106099913300022185Freshwater WetlandsMDIRLAIAILAFLTLALLPLLDRVASLEINAQGLRSHLI
Ga0079039_106117013300022185Freshwater WetlandsMDIRLVIAVLAFLTLALLPMLDRAASAETNAKGLRAYLIRIARWTKE
Ga0079039_106205523300022185Freshwater WetlandsMHIPLVIAILAVLALALLPVLDRATSSEINAKGLRVYLIRVARWTKE
Ga0079039_108982113300022185Freshwater WetlandsMDIRLVIAVLALLTLAMLPVLDRFASSEINAKGLRSYLIR
Ga0079039_110024323300022185Freshwater WetlandsMHVPLIIAVLAFLAFALLPVLDRSARSEINAKGLRSYLIRIAHWAKE
Ga0079039_110488823300022185Freshwater WetlandsMDIRLVIAILAFLILALLPVLDRFAGSETNDKGLRSYLI
Ga0079039_110622923300022185Freshwater WetlandsMDIRLVIAVLAFLTLAMLPVLDRFASSEINAKGLRSYLIRIARWTNE
Ga0079039_110672023300022185Freshwater WetlandsMHIPLVIAVLAFLAFALLPVLDRSASSEINAKGLRYYLIRIARWAKE
Ga0079039_110672043300022185Freshwater WetlandsMHIPLAIAILAFLVLALLPVLDRSASSEIIAKGPRAYLIRIARWAQE
Ga0079039_114664213300022185Freshwater WetlandsMDIRLIIAMLAFLAFALLPALDHFASAETGAKGLRAYLIRIARWTNE
Ga0079039_115538123300022185Freshwater WetlandsMHIPLVIAILAVLALALLPVLDRATSSEINAKGLRVYLIRIARWTKE
Ga0079039_117829073300022185Freshwater WetlandsVHIPLIIAILALMALALLPALDRSANSEIEAKGVRAYVNRIARWTKE
Ga0079039_123660623300022185Freshwater WetlandsMHMPLIIAVLAFLAFALLPVLDRSASSEINAEGLRYYLIRIACWTKE
Ga0079039_124680623300022185Freshwater WetlandsMHIPLIIAILAVLALALLPLLDRSASSEIGAKGLRVYLVRI
Ga0079039_127213323300022185Freshwater WetlandsVDTRLVIAILAFLTLAMLPVLDRFASAEINAKGLRSYLIRIARWTKE
Ga0079039_128616133300022185Freshwater WetlandsMDIPLVIAVVAVLALALLPVLDRAASSEINAKGLRAHLIRIARWTKE
Ga0079039_134222213300022185Freshwater WetlandsMHIPLAIAILAFLVFALLPVLDRSASSEINAEGLRYYLIRIARWTNE
Ga0079039_140820423300022185Freshwater WetlandsMHIPLGIAILAVLALALLPVLDRSTSSEINAKGLRVYLIRIARWTKE
Ga0079039_141878923300022185Freshwater WetlandsMHIPLVIAILAFLAFALLPVLDRSVSSEIATKGLRSYLMRIARWTKE
Ga0079039_143831213300022185Freshwater WetlandsVDIRLGIAVLAFLTLALLPVLDRMADTEFNAKGLRSYLIRVARWTKE
Ga0079039_144479023300022185Freshwater WetlandsMHIPLVIAILAVLALALLPMLDRATSSEISAKGLRVYLIRIARWTKE
Ga0079039_145091023300022185Freshwater WetlandsMDIPLVIAVVAILALALLPVLDRAASSEINAKGLRAHLIRIARWTKE
Ga0079039_147165223300022185Freshwater WetlandsMHVPLVLAILAFLALMLLSVLDQVASSEIDAEGVRSYLVRVARWTKE
Ga0079039_149535423300022185Freshwater WetlandsMDVPIVIAIIAFLTLALLPVLDRVASSEINAKGPRAYLIRIARWTKE
Ga0079039_150768833300022185Freshwater WetlandsMDTRIVIAILAFLTLALLPVLDRVASSEINAKGPRAYLIRIARWTKE
Ga0079039_154598823300022185Freshwater WetlandsMHIPLGIAILAFLILSALPVLDHFASSEINARSLRTCLVRIARWTQE
Ga0079039_155363843300022185Freshwater WetlandsMHIPLVIAILASFAYALLPVLDRSASSEINAEGLRYYLIRVARWTNE
Ga0079039_161427023300022185Freshwater WetlandsMHIPLGIAVLALLALVLLPVLDRSTNSDIDAKAPRSYLIRIARWTKE
Ga0079039_162624523300022185Freshwater WetlandsMDLPLVIAVVAILALALLPVLDRAASSEINAKGLRAQLIRIARWTKE
Ga0079039_163929713300022185Freshwater WetlandsMHIPLVIAILAVLALALLPVLDGSASSEINAKGPRAYLIRIARWTKE
Ga0079039_165006113300022185Freshwater WetlandsMDIPLVIAVVALLALALLPVPDRAASPEINAKGLRAHLIRIARWTKE
Ga0209594_112183713300025130GroundwaterMHVPLVLAILAFLALMLLPVLDQVASSEIDAEGVRSHLLRVARWTKE
Ga0209498_116495423300025135SedimentMHIPLIIAALAFLALVLLPVLDRSVNSEINAKDLRGYLIRLARWTQE
Ga0209613_118410113300026255Anaerobic Biogas ReactorMHIPLVIAILAFLALVLLPVLDRSARSENTTKDLRTYLIRIASWTKE
Ga0209704_106943133300027693Freshwater SedimentMHIPLVIAILAFLAFALLPVLDRSANSRINAPRLRTYWIRVARWVKE
Ga0209262_1022469013300027841FreshwaterMHIPLVISILALLAFALLPVLDRSANSKINGPGPRAYWIRVARWAKE
Ga0209397_1009750123300027871WetlandMHIPFAIAVLALLAFALLPVLDRSANSKVNGPGPRAYWIRVARWAKE
Ga0209293_1004312053300027877WetlandMDIRLVIAVLAFLTLAMLPVLDRFASSEINAKGLRSYLIRIARWTKE
Ga0209450_1049320313300027885Freshwater Lake SedimentMHIPLGLAILALMAFALLPALDRSDASRINAPGLRDYWNRVAHWVKE
Ga0209450_1074091623300027885Freshwater Lake SedimentMHVPLVLAILAFLALTLLPVLDRVASSEIDAEGVRSHLIRVARWAKE
Ga0209450_1083020823300027885Freshwater Lake SedimentMHIPLVIAILAFLAFALLPLLDRSTRSEINAKGLRSYFIRVARWAND
Ga0209450_1115667223300027885Freshwater Lake SedimentMHFPLVLAILALLTLLLLPLVDRSASSEIDAKGLRSYLIRIARWSKE
Ga0208980_1013730323300027887WetlandMHIPLVIALLALLVFMLLPMLDRPTGSEINATGVRAHWVRIARWSKK
Ga0209496_1019614423300027890WetlandMDIRLVIAILAFLILALLPVLDRFAGSETNDKGLRSYLIRIARWTKE
Ga0209254_1012227733300027897Freshwater Lake SedimentMHIPLVISILALLAFALLPVLDRSANSKVNGPGPRAYWIRVARWAKE
Ga0209254_1014818223300027897Freshwater Lake SedimentMHIPLIIAILAFLAFALLPVLDLITRSEINAKAPRSYLIRVARWTKE
Ga0209254_1020450733300027897Freshwater Lake SedimentMDIPLVIAVVALLALALLPVLDRAASSEINAKGLRAQLIRIARWTKE
Ga0209254_1083483613300027897Freshwater Lake SedimentMHIPLVIAILAFLAFALLPVLDRSASSGINTKGLRAYLIRIARWAQE
Ga0209253_1013769433300027900Freshwater Lake SedimentMHIPLVIAILAFLAFALLPVLDRSASSGINAKGLRAHLIRIARWAQE
Ga0209253_1078062823300027900Freshwater Lake SedimentMDIRLVIAVLAFLTLAMLPVLDRFASSEINARGLRSYLIRIARWTNE
Ga0209079_1021237933300027972Freshwater SedimentMHIPFAIAVLALLAFALLPVLDRSANSRINAPRLRTYWIRVARWVKE
(restricted) Ga0247840_1005208733300028581FreshwaterMHIPLIIAIVAFLAFVLLQTLDLSTASRANATGLRAYWNRIARWTQEQAV
(restricted) Ga0247841_1033182433300029286FreshwaterMHIPLAIAILAFLAFVLLPVLDHPASSEINAKGLRAYWVRIARWAKE
Ga0315278_1121494923300031997SedimentMHIPFVIAILAFLAFALLPVLDHFNTSEINATGLRSCFIRIAHWAKG
Ga0315292_1063354823300032143SedimentMHIPLAIAVLALLAFALLPVLDRTIGSEVNAKGLRVYWVRVARWAKG
Ga0315292_1125948913300032143SedimentIPFIIAILALLAFALLPLLDRSANLETRATGLRPYMIRLAHSTKD
Ga0315283_1071087213300032164SedimentMHIPLVIAILAFLAFALLPVLDRSASSEISAKGLHAYLIRIARWAQE
Ga0315283_1120938133300032164SedimentMHIPLIIAILAFLVFALLPVLDRSASSETDTTGLRAYMIRIAHWAKE
Ga0315283_1136923913300032164SedimentMHIPLVIAILAVLALALLSLLDHFNTAEINAKGPRSYFIRIARWAK
Ga0315283_1157502633300032164SedimentMHIPVAIAVLALLAFALLPALDRTTGSEVNARGLRVYWVRVARW
Ga0315276_1061000823300032177SedimentMHIPLAIAVLAFLAFMLLTVLDFSPRSEINAKGLRAFWVRIARWAEG
Ga0315287_1068451513300032397SedimentMHIPLIIAILAFLAFALLPVLDRSASSETDTTGLRAYMIRIAHWAKE
Ga0315273_1267015313300032516SedimentMHIALIIAILALLAFALLPVLEHFNTSETDATGLRAYMIRIAHWAKE
Ga0316605_1076766233300033408SoilMHLPLVIAVLALLAFALLPVLDRSASPETNAKGLRAYLIRIARWAKE
Ga0316605_1120639413300033408SoilMHIPLVIAILAVLALALLPVLDRSTNSEINAKGLRVYLIRIARWTKE
Ga0316605_1244748823300033408SoilMHIPLGLAILALMAFALLPVLDRSDASRINAPGLRDYWNRVAHWVKE
Ga0316603_1123243713300033413SoilNNRDTRSTPMHLPLVIAVLALLAFALLPVLDRSASPETNAKGLRAYLIRIARWAKE
Ga0316622_10051232923300033416SoilMDIRLVIAVLALLTLAMLPVLDRFASSEINAKGLRSYLIRVARWTNE
Ga0316622_10159853313300033416SoilMDIPLVIAVVAVLALALLPVLDRAASLEINAKGLRAHLIRIARWTKE
Ga0316622_10251210223300033416SoilMHIPLVIAILAVLAFALLPVLDRSASSEINAKGLRVYLIRIARWTKE
Ga0316622_10312547313300033416SoilMDIRLVIAILAFLTLALLPVLDHAASSEINAKGLRSYLIRIARWTNE
Ga0316625_10011824433300033418SoilMHIPFAIAVLALLAFALLPVLDRSANFRINALGLRTYWIRVARWVKE
Ga0316625_10119874913300033418SoilMHIPLVIAVLALLTFALLPVLDRSARAESNAKGPRPYLSRVTRWMKQ
Ga0316600_1128112223300033481SoilMDIPLVIAVVAVLALALLPVLDRAASSEINAKGPRSYLIRVARWTKE
Ga0316626_1065109723300033485SoilMDIRLVIAVLALLTLAMLPVLDRFASSEINAKGLRSYLIRIARWTKE
Ga0316630_1028043723300033487SoilMHLPLVIAVLALLAFALLPVLDRSASPETNTKGLRAYLIRIARWAKE
Ga0316616_10069804723300033521SoilMDIRLVIAVLAFLTLAMLPVLDRFASSEINAKGLRSYLIRVARWTNE
Ga0316616_10086127743300033521SoilMHVPLVISILALLAFALLPALDLTTGSEVNAKGLRGYWVRVARWAKG
Ga0316616_10196451323300033521SoilMHVPLVLAILAFLALMLLPVLDQVASSEIDAEGVRSYLIRMARWTKE
Ga0316616_10294648713300033521SoilMHIPLAIAVLAFLAFTLLPVLDRSANFRINALGLRTYWIRVARWVKE
Ga0316616_10307416823300033521SoilMHIPLVIAILAVLALALLPMLDRATSSEINAKGLRVYLIRIARWTKE
Ga0316616_10411176623300033521SoilVYIPLVIAVLAFLAFALLPILDRSAGSEINAKGLRVYWVRVARWARG
Ga0316617_10071172423300033557SoilMDIRLVIAVLAFLTLALLPVLDRIADTEFNAKGPRSYLIRIARWTKE

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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