Metagenome / Metatranscriptome Family F039775

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F039775
Family Type	Metagenome / Metatranscriptome
Number of Sequences	163
Average Sequence Length	70 residues
Representative Sequence	MIDIAIWVIVLLLGAIVYIVWHGLQITRAQHQSTMAGLSSLGDTHKLGYEALTLTMQRLEQRVRQLEERR
Number of Associated Samples	116
Number of Associated Scaffolds	163

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	14.11 %
% of genes near scaffold ends (potentially truncated)	39.88 %
% of genes from short scaffolds (< 2000 bps)	87.12 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.920 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.767 % of family members)
Environment Ontology (ENVO)	Unclassified (22.086 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.417 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.39% β-sheet: 0.00% Coil/Unstructured: 30.61%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 163 Family Scaffolds
PF00950	ABC-3	5.52
PF07896	DUF1674	4.91
PF05726	Pirin_C	3.68
PF00211	Guanylate_cyc	3.07
PF01204	Trehalase	2.45
PF01738	DLH	1.84
PF00111	Fer2	1.84
PF13420	Acetyltransf_4	1.84
PF14347	DUF4399	1.84
PF00190	Cupin_1	1.23
PF03992	ABM	1.23
PF01135	PCMT	1.23
PF13458	Peripla_BP_6	0.61
PF00293	NUDIX	0.61
PF13489	Methyltransf_23	0.61
PF00903	Glyoxalase	0.61
PF00118	Cpn60_TCP1	0.61
PF14067	LssY_C	0.61
PF02142	MGS	0.61
PF01272	GreA_GreB	0.61
PF13358	DDE_3	0.61
PF13649	Methyltransf_25	0.61
PF01206	TusA	0.61

COG ID	Name	Functional Category	% Frequency in 163 Family Scaffolds
COG0609	ABC-type Fe3+-siderophore transport system, permease component	Inorganic ion transport and metabolism [P]	5.52
COG1108	ABC-type Mn2+/Zn2+ transport system, permease component	Inorganic ion transport and metabolism [P]	5.52
COG4606	ABC-type enterochelin transport system, permease component	Inorganic ion transport and metabolism [P]	5.52
COG5508	Uncharacterized conserved protein, DUF1674 domain	Function unknown [S]	4.91
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	3.68
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	3.07
COG1626	Neutral trehalase	Carbohydrate transport and metabolism [G]	2.45
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	1.23
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	1.23
COG2519	tRNA A58 N-methylase Trm61	Translation, ribosomal structure and biogenesis [J]	1.23
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	1.23
COG0425	Sulfur carrier protein TusA (tRNA thiolation, molybdenum cofactor biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.61
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.61
COG0782	Transcription elongation factor, GreA/GreB family	Transcription [K]	0.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.92 %
Unclassified	root	N/A	49.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.92 %
Unclassified	root	N/A	49.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.92 %
Unclassified	root	N/A	49.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	34.97 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.08 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	16.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.07 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.45 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.08 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.20 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.07 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.08 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.68 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.07 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.07 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2.45 %
Roseiarcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae	1.23 %
Kaistiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.08 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.68 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	3.07 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.07 %
Roseiarcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus	1.23 %
unclassified Burkholderiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae	1.23 %
Bauldia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia	0.61 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.08 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.68 %
unclassified Afipia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia	3.07 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.07 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1.23 %
Burkholderiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	1.23 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.61 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.08 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.68 %
Afipia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp.	3.07 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.07 %
Roseiarcus fermentans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1.23 %
Burkholderiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	1.23 %
Bauldia litoralis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	0.61 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001546\|JGI12659J15293_10025886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1485	Open in IMG/M
3300002245\|JGIcombinedJ26739_100749870	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300003505\|JGIcombinedJ51221_10110071	All Organisms → cellular organisms → Bacteria → Proteobacteria	1100	Open in IMG/M
3300003505\|JGIcombinedJ51221_10270082	Not Available	692	Open in IMG/M
3300004080\|Ga0062385_11026431	Not Available	555	Open in IMG/M
3300004091\|Ga0062387_101573198	Not Available	530	Open in IMG/M
3300004479\|Ga0062595_100332706	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300004631\|Ga0058899_11513169	Not Available	582	Open in IMG/M
3300005434\|Ga0070709_11615081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp.	528	Open in IMG/M
3300005435\|Ga0070714_100456522	All Organisms → cellular organisms → Bacteria → Proteobacteria	1214	Open in IMG/M
3300005458\|Ga0070681_10182829	All Organisms → cellular organisms → Bacteria → Proteobacteria	2018	Open in IMG/M
3300005534\|Ga0070735_10063103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2409	Open in IMG/M
3300005534\|Ga0070735_10066545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2334	Open in IMG/M
3300005542\|Ga0070732_10018867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	3870	Open in IMG/M
3300005591\|Ga0070761_10398058	Not Available	840	Open in IMG/M
3300005591\|Ga0070761_11053043	Not Available	517	Open in IMG/M
3300005610\|Ga0070763_10314091	Not Available	865	Open in IMG/M
3300005764\|Ga0066903_101020659	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300006173\|Ga0070716_101080429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp.	639	Open in IMG/M
3300006174\|Ga0075014_100514278	All Organisms → cellular organisms → Bacteria → Proteobacteria	672	Open in IMG/M
3300006176\|Ga0070765_100460261	Not Available	1193	Open in IMG/M
3300006804\|Ga0079221_11665739	Not Available	519	Open in IMG/M
3300009093\|Ga0105240_10135172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2953	Open in IMG/M
3300009521\|Ga0116222_1146378	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300009551\|Ga0105238_11752787	Not Available	653	Open in IMG/M
3300009633\|Ga0116129_1015041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2847	Open in IMG/M
3300009633\|Ga0116129_1027778	All Organisms → cellular organisms → Bacteria	1905	Open in IMG/M
3300009826\|Ga0123355_11085201	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300009826\|Ga0123355_11087382	Not Available	834	Open in IMG/M
3300009826\|Ga0123355_11586476	Not Available	632	Open in IMG/M
3300009826\|Ga0123355_12106371	Not Available	519	Open in IMG/M
3300010049\|Ga0123356_10227219	Not Available	1928	Open in IMG/M
3300010049\|Ga0123356_13460666	Not Available	547	Open in IMG/M
3300010049\|Ga0123356_13772419	Not Available	523	Open in IMG/M
3300010373\|Ga0134128_11529350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	734	Open in IMG/M
3300010373\|Ga0134128_12451534	Not Available	575	Open in IMG/M
3300010869\|Ga0126359_1634898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp.	632	Open in IMG/M
3300011120\|Ga0150983_11432039	Not Available	512	Open in IMG/M
3300011120\|Ga0150983_12184086	Not Available	507	Open in IMG/M
3300011404\|Ga0153951_1018674	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300011418\|Ga0153954_1000024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	163770	Open in IMG/M
3300012090\|Ga0153956_1070605	Not Available	1189	Open in IMG/M
3300012984\|Ga0164309_11565244	Not Available	564	Open in IMG/M
3300012985\|Ga0164308_11517381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	616	Open in IMG/M
3300014501\|Ga0182024_12630034	Not Available	540	Open in IMG/M
3300015206\|Ga0167644_1004185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8386	Open in IMG/M
3300016270\|Ga0182036_10464632	Not Available	997	Open in IMG/M
3300016294\|Ga0182041_11488449	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300016319\|Ga0182033_12225007	Not Available	500	Open in IMG/M
3300016357\|Ga0182032_11665062	Not Available	556	Open in IMG/M
3300016387\|Ga0182040_11059930	Not Available	678	Open in IMG/M
3300016404\|Ga0182037_10778015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	824	Open in IMG/M
3300016404\|Ga0182037_11991500	Not Available	521	Open in IMG/M
3300016445\|Ga0182038_11367682	Not Available	634	Open in IMG/M
3300017822\|Ga0187802_10262451	Not Available	670	Open in IMG/M
3300017924\|Ga0187820_1135372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	732	Open in IMG/M
3300017970\|Ga0187783_10089029	Not Available	2274	Open in IMG/M
3300017970\|Ga0187783_10103043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2104	Open in IMG/M
3300017970\|Ga0187783_10236706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1337	Open in IMG/M
3300017972\|Ga0187781_10494857	Not Available	877	Open in IMG/M
3300017993\|Ga0187823_10131053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	776	Open in IMG/M
3300018001\|Ga0187815_10075316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1418	Open in IMG/M
3300020579\|Ga0210407_10080329	All Organisms → cellular organisms → Bacteria → Proteobacteria	2457	Open in IMG/M
3300020579\|Ga0210407_10146923	All Organisms → cellular organisms → Bacteria	1815	Open in IMG/M
3300020579\|Ga0210407_11296425	Not Available	544	Open in IMG/M
3300020580\|Ga0210403_10685295	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300020581\|Ga0210399_11320182	Not Available	567	Open in IMG/M
3300020582\|Ga0210395_10582024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	841	Open in IMG/M
3300020582\|Ga0210395_10801489	Not Available	702	Open in IMG/M
3300020583\|Ga0210401_10413775	All Organisms → cellular organisms → Bacteria → Proteobacteria	1211	Open in IMG/M
3300021088\|Ga0210404_10587275	Not Available	633	Open in IMG/M
3300021180\|Ga0210396_10351428	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300021181\|Ga0210388_10950892	Not Available	739	Open in IMG/M
3300021181\|Ga0210388_11189414	Not Available	647	Open in IMG/M
3300021384\|Ga0213876_10038734	All Organisms → cellular organisms → Bacteria	2517	Open in IMG/M
3300021401\|Ga0210393_10862841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	735	Open in IMG/M
3300021401\|Ga0210393_11447706	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300021401\|Ga0210393_11639890	Not Available	509	Open in IMG/M
3300021402\|Ga0210385_11311316	Not Available	555	Open in IMG/M
3300021403\|Ga0210397_10296832	Not Available	1186	Open in IMG/M
3300021403\|Ga0210397_10554867	All Organisms → cellular organisms → Bacteria → Proteobacteria	874	Open in IMG/M
3300021403\|Ga0210397_10611439	All Organisms → cellular organisms → Bacteria → Proteobacteria	833	Open in IMG/M
3300021405\|Ga0210387_10247691	All Organisms → cellular organisms → Bacteria → Proteobacteria	1558	Open in IMG/M
3300021405\|Ga0210387_10605688	Not Available	973	Open in IMG/M
3300021405\|Ga0210387_11761218	Not Available	523	Open in IMG/M
3300021432\|Ga0210384_11522246	Not Available	574	Open in IMG/M
3300021474\|Ga0210390_10814322	Not Available	773	Open in IMG/M
3300021474\|Ga0210390_11176255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	620	Open in IMG/M
3300021474\|Ga0210390_11577417	Not Available	517	Open in IMG/M
3300021477\|Ga0210398_10081824	All Organisms → cellular organisms → Bacteria	2624	Open in IMG/M
3300021559\|Ga0210409_11270831	Not Available	612	Open in IMG/M
3300021560\|Ga0126371_11782176	Not Available	737	Open in IMG/M
3300022530\|Ga0242658_1221582	Not Available	523	Open in IMG/M
3300022724\|Ga0242665_10362902	Not Available	521	Open in IMG/M
3300022726\|Ga0242654_10091314	All Organisms → cellular organisms → Bacteria → Proteobacteria	942	Open in IMG/M
3300025463\|Ga0208193_1046246	Not Available	978	Open in IMG/M
3300025912\|Ga0207707_10514743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1019	Open in IMG/M
3300025913\|Ga0207695_10110794	All Organisms → cellular organisms → Bacteria → Proteobacteria	2724	Open in IMG/M
3300025916\|Ga0207663_11364501	Not Available	571	Open in IMG/M
3300027069\|Ga0208859_1010205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1029	Open in IMG/M
3300027117\|Ga0209732_1037450	Not Available	838	Open in IMG/M
3300027505\|Ga0209218_1048173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → unclassified Burkholderiaceae → Burkholderiaceae bacterium	857	Open in IMG/M
3300027568\|Ga0208042_1115253	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300027609\|Ga0209221_1129383	Not Available	637	Open in IMG/M
3300027692\|Ga0209530_1065714	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300027795\|Ga0209139_10049337	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300027867\|Ga0209167_10725373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	543	Open in IMG/M
3300027908\|Ga0209006_10154922	All Organisms → cellular organisms → Bacteria	2009	Open in IMG/M
3300027908\|Ga0209006_10792330	Not Available	769	Open in IMG/M
3300027908\|Ga0209006_11287790	Not Available	566	Open in IMG/M
3300027986\|Ga0209168_10299207	Not Available	791	Open in IMG/M
3300028906\|Ga0308309_10381696	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300030617\|Ga0311356_11879603	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300030862\|Ga0265753_1107920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp.	571	Open in IMG/M
3300031057\|Ga0170834_105996286	Not Available	530	Open in IMG/M
3300031090\|Ga0265760_10236517	Not Available	628	Open in IMG/M
3300031231\|Ga0170824_116452419	Not Available	524	Open in IMG/M
3300031231\|Ga0170824_127131409	Not Available	611	Open in IMG/M
3300031234\|Ga0302325_12811935	Not Available	570	Open in IMG/M
3300031474\|Ga0170818_101214917	Not Available	724	Open in IMG/M
3300031679\|Ga0318561_10726993	Not Available	546	Open in IMG/M
3300031680\|Ga0318574_10595093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300031682\|Ga0318560_10629225	Not Available	581	Open in IMG/M
3300031708\|Ga0310686_101390371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	2836	Open in IMG/M
3300031708\|Ga0310686_103284715	All Organisms → cellular organisms → Bacteria → Proteobacteria	4776	Open in IMG/M
3300031708\|Ga0310686_108468323	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300031708\|Ga0310686_109700883	All Organisms → cellular organisms → Bacteria → Proteobacteria	1194	Open in IMG/M
3300031708\|Ga0310686_111770965	Not Available	505	Open in IMG/M
3300031708\|Ga0310686_117406142	All Organisms → cellular organisms → Bacteria → Proteobacteria	1020	Open in IMG/M
3300031715\|Ga0307476_10540334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp.	864	Open in IMG/M
3300031718\|Ga0307474_11589935	Not Available	514	Open in IMG/M
3300031719\|Ga0306917_10595177	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300031719\|Ga0306917_11568281	Not Available	506	Open in IMG/M
3300031779\|Ga0318566_10434565	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300031795\|Ga0318557_10409856	Not Available	623	Open in IMG/M
3300031890\|Ga0306925_10767144	All Organisms → cellular organisms → Bacteria → Proteobacteria	1004	Open in IMG/M
3300031890\|Ga0306925_12182805	Not Available	516	Open in IMG/M
3300031890\|Ga0306925_12266523	Not Available	503	Open in IMG/M
3300031910\|Ga0306923_10999634	All Organisms → cellular organisms → Bacteria → Proteobacteria	909	Open in IMG/M
3300031910\|Ga0306923_11445757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	722	Open in IMG/M
3300031912\|Ga0306921_10196255	All Organisms → cellular organisms → Bacteria → Proteobacteria	2366	Open in IMG/M
3300031912\|Ga0306921_10486558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Roseiarcaceae → Roseiarcus → Roseiarcus fermentans	1436	Open in IMG/M
3300031912\|Ga0306921_12194585	Not Available	582	Open in IMG/M
3300031938\|Ga0308175_101808993	All Organisms → cellular organisms → Bacteria → Proteobacteria	684	Open in IMG/M
3300031939\|Ga0308174_10143569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1769	Open in IMG/M
3300031954\|Ga0306926_10588587	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300031954\|Ga0306926_11270295	Not Available	861	Open in IMG/M
3300032009\|Ga0318563_10090780	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300032009\|Ga0318563_10760724	Not Available	519	Open in IMG/M
3300032009\|Ga0318563_10811404	Not Available	501	Open in IMG/M
3300032043\|Ga0318556_10606273	Not Available	571	Open in IMG/M
3300032059\|Ga0318533_10314967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1137	Open in IMG/M
3300032076\|Ga0306924_10707593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1131	Open in IMG/M
3300032089\|Ga0318525_10398024	Not Available	706	Open in IMG/M
3300032180\|Ga0307471_103080206	Not Available	591	Open in IMG/M
3300032261\|Ga0306920_101207648	All Organisms → cellular organisms → Bacteria → Proteobacteria	1092	Open in IMG/M
3300032261\|Ga0306920_103668021	Not Available	564	Open in IMG/M
3300032895\|Ga0335074_10359125	Not Available	1613	Open in IMG/M
3300032895\|Ga0335074_10525349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1216	Open in IMG/M
3300032895\|Ga0335074_11496101	Not Available	537	Open in IMG/M
3300032896\|Ga0335075_10017021	All Organisms → cellular organisms → Bacteria	10828	Open in IMG/M
3300032896\|Ga0335075_10053288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Kaistiaceae → Bauldia → Bauldia litoralis	5615	Open in IMG/M
3300033134\|Ga0335073_10011086	All Organisms → cellular organisms → Bacteria → Proteobacteria	12670	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.41%
Host-Associated	Host-Associated	8.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.66%
Aquatic	Environmental → Aquatic	6.75%
Arthropoda	Host-Associated → Arthropoda	4.29%
Plants	Host-Associated → Plants	2.45%
Fungi	Host-Associated → Fungi	1.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.44%
Freshwater	Environmental → Aquatic → Freshwater	6.13%
Digestive System	Host-Associated → Arthropoda → Digestive System	4.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.84%
Mycelium	Host-Associated → Fungi → Mycelium	1.84%
Peat	Environmental → Terrestrial → Peat	1.23%
Sediment	Environmental → Aquatic → Sediment	0.61%
Roots	Host-Associated → Plants → Roots	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.12%
Loam	Environmental → Terrestrial → Soil → Loam	16.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.75%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.13%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	4.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.84%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.61%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	44.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.13%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	4.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.84%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.84%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.23%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.61%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.61%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.13%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	4.29%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.07%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.07%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.45%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.45%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.84%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.84%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.23%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.23%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.23%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.23%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.61%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.61%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.61%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.61%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009633	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011404	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ035 MetaG	Host-Associated	Open in IMG/M
3300011418	Attine ant fungus gardens microbial communities from Florida, USA - TSFL038 MetaG	Host-Associated	Open in IMG/M
3300012090	Attine ant fungus gardens microbial communities from Florida, USA - TSFL040 MetaG	Host-Associated	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025463	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027069	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)	Environmental	Open in IMG/M
3300027117	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12659J15293_100258862	3300001546	Forest Soil	MIDIAIWVIVLLLGAVVYIVWHGLQIMRAQHQSTMAGLSSLGDTHKLGYEALTMAMQRLEQRVKQLEERR*
JGIcombinedJ26739_1007498701	3300002245	Forest Soil	MMEIAVWVIVVLLGAVVYIVWHGFKFARDQRQSTMATLSSLGDTHRLGYQGLTLVVQRLEQRVKQ
JGIcombinedJ51221_101100711	3300003505	Forest Soil	FGMFDIAIWVIVVPLGAIAFIVWHGLKITRAQHQSAMATLSTLGDTHRLGYETLAMSVRRLEQRVKELEGRR*
JGIcombinedJ51221_102700821	3300003505	Forest Soil	MMEIAVWVIVVLLGAVVYIVWHGFKFARDQRQSTMATLSSLGDTHRLGYQGLTLVVQRLEQRVKQLEERR*
Ga0062385_110264311	3300004080	Bog Forest Soil	MLDIAIWVIVLLLGAVVYIVWHGLQITRAQHQSAMAALSSLGDTHKLGYEGLTMAMQRLEQRVKQLEERR*
Ga0062387_1015731982	3300004091	Bog Forest Soil	MIDIAIWVIVLLLGAVVYIVWHGLQIMRDQHRSIMAGRSSLGDTHKLGYEALTMAMQRL
Ga0062595_1003327063	3300004479	Soil	MIDIAIWLIVVLLGAVVYIVWHGLQIARAQHQSTMTALSSLSDTHKLGYEGLTLAVQRLENRVRQLEERR*
Ga0058899_115131692	3300004631	Forest Soil	MEIAVWVIVVLLGAVVYIVWHGFKFARDQRQSTMATLSSLGDTHRLGYQGLTLVVQRLEQRVKQLEERR*
Ga0070709_116150811	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	SVVTNPSLLMIDIAIWLIVVLLGAVVYIVWHGLQIARAQHQSTMTALSSLSDTHKLGYEGLTLAVQRLENRVRQLEERR*
Ga0070714_1004565222	3300005435	Agricultural Soil	MIDIAIWLIVVLLGAIVYIVWRGLQVARSQHQSTMTALSSLSDTHKLGYEGLTLAVQRLEQRVRQLEERR*
Ga0070681_101828291	3300005458	Corn Rhizosphere	MIGIAIWVIVVLLGAVVYIVWRGLQVTRAQHQSTMAALSSLGDTHKLGYEALTLAVQRLEQRVRQLEERG*
Ga0070735_100631034	3300005534	Surface Soil	MIDIAIWVIVILLGAIVYIVWRGLKITRDQHQSTMAALSSLGDTHKLGYEALTLAMQRLEQRVRQLEERR*
Ga0070735_100665452	3300005534	Surface Soil	MITIAIWVIVVLLGAIVYIVWHGLQITRAQHQSNMAALASLGDTHRLGYDALTLTVQRLEQRVNQLEERR*
Ga0070732_100188675	3300005542	Surface Soil	MITIAIWVIVVLLGAIVYIVWHGLQITRAQHQSTMAGLASLGDTHRLGYDALTLTVQRLEQRVNQLEERR*
Ga0070761_103980582	3300005591	Soil	MIDIAIWVIVFLLGAIVYIVWHGLQITRAQHQSTMAGLSSLGDTHKLGYEALTLTMQRLEQRVKQLEERR*
Ga0070761_110530431	3300005591	Soil	LQTRPSLKARLDMTEIAIWVIVILLGAIVYIVWHGLKITRDQHQSTMAALSSLGDTHKLGYEALTLTMQRLEQRVRQLEERR*
Ga0070763_103140911	3300005610	Soil	MEIAVWVIVVLLGAVVYIVWHGFKFARDQRQSTMATLSSLGDTHRLGYQGLTLVVQRLEQRVKQLEGRR*
Ga0066903_1010206592	3300005764	Tropical Forest Soil	MIDIAIWVIVLLLGAVVYIVWHGLQIARAQHQSTMTALSSLGDTHKLGYEGLTLAVQRLEQRVRQLEERR*
Ga0070716_1010804292	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	IVVLLGAVVYIVWHGLQIARAQHQSTMTALSSLSDTHKLGYEGLTLAVQRLENRVRQLEERR*
Ga0075014_1005142781	3300006174	Watersheds	MIDIAIWVIVLLLGAIVYIVWHGLQITRAQHQSTMAGLSSLGDTHKLGYEALTLTMQRLEQRVRQLEERR*
Ga0070765_1004602611	3300006176	Soil	MFDIAIWVIVVPLGAIAFIVWHGLKITRAQHQSAMATLSTLGDTHRLGYETLAMSVRRLEQRVKELEGRR*
Ga0079221_116657392	3300006804	Agricultural Soil	MITIAIWVIVVLLGAIVYIVWHGLQITRAQHQSMMAALASLGDTHRLGYDALTLTVQRLEQRVNQLEERR*
Ga0105240_101351725	3300009093	Corn Rhizosphere	MITIAIWVIVVLLGAVVYIVWHGLQITRAQHQSTMASLASLGDTHRLGYDALTLSVQRLEQRVHQLEERR*
Ga0116222_11463782	3300009521	Peatlands Soil	MTDIAIWVIVILLGAIVYIVWHSLKITRDQHQSTMAALSSLGDTHKLGYEALTLAMQRLEQRVRQLEERR*
Ga0105238_117527872	3300009551	Corn Rhizosphere	MIGIAIWVIVVLLGAVVYIVWRGLQVTRAQHQSTMAALSSLGDTHKLGYEALTLAVQRLEQRVRQL
Ga0116129_10150412	3300009633	Peatland	MTEIAIWVIVILLGAIVYIVWHGLKITRDQHQSTMAALSSLGDTHKLGYEALTLTMQRLEQRVRQLEERR*
Ga0116129_10277782	3300009633	Peatland	MLDIAIWVIVLLLGAVVYIVWNGLQITRAQHQSAMASLSSLGDTHKLGYEGLTMAVQRLEQRVKQLEDRR*
Ga0123355_110852012	3300009826	Termite Gut	NIAIWVVIVPLGAIVYIAWHGLKITRAQHQASTSALSTLGDTHRLGYDALSMSLQRLERRVKQLEGRR*
Ga0123355_110873821	3300009826	Termite Gut	MIDIAVWLIVVLLGAVVYIVWHALQITRAQHQSTMTALSSLGDTHKLGYEGLTLAVQRLEQRVRQLEERR*
Ga0123355_115864761	3300009826	Termite Gut	MIDIAICFLVLPLGAIAYIVWNGLKITRTQHQGTMAALSTLGDTHRLGYDALSMSLRRLERRVKQLEGRR*
Ga0123355_121063711	3300009826	Termite Gut	MIEIAIWVIVILLGAIVYIVWHGLKITRDQHHSTMAALSSLGDTHKLGYEALTLAMQRLEQRVRQLEERR*
Ga0123356_102272191	3300010049	Termite Gut	MINIAIWVVIVPLGAIVYIAWHGLKITRAQHQASASALSTLGETHRLGYDALSMSLQRLERRVKQLEGRR*
Ga0123356_134606661	3300010049	Termite Gut	MINVAIWVVIVPLGAIVYIAWHGLKITRAQHQARTSALSTLGDTHRLGYDALSMSLQRLERRV
Ga0123356_137724191	3300010049	Termite Gut	MIDIAICFLVLPLGAIAYIVWNGLKITRTQHQGTMAALSSLGDTHRLGYEALDRSVRRLEQRVKELERAA*
Ga0134128_115293501	3300010373	Terrestrial Soil	AIAIWVIVVLLGAVVYIVWHGLQITRAQHQSTMASLASLGDTHRLGYDALTLSVQRLEQRVHQLEERR*
Ga0134128_124515341	3300010373	Terrestrial Soil	MITIAIWVIVVLLGAIVYIVWHGLQITRAQHQSMMAALASLGDTHRLGYDALTLTVQRLEQRVNQLEE
Ga0126359_16348981	3300010869	Boreal Forest Soil	GLEMIDIAVWVIVLLLGAVVYIVWHGLQITRAQHQSTMAGLSSLGDTHKLGYEALTLTMQRLEQRVRQLEERR*
Ga0150983_114320391	3300011120	Forest Soil	DIAIWVIVLLLGAVVYIVWHGLQIMRAQHQSTMAGLSSLGDTHKLGYEALTMAMQRLEQRVKQLEERR*
Ga0150983_121840861	3300011120	Forest Soil	MEIAVWVIVVLLGAVVYIVWHGFKFARDQRQSTMATLSSLGDTHKLGYQGLTLVVQRLEQRVKQLEERR*
Ga0153951_10186743	3300011404	Attine Ant Fungus Gardens	MLDIAIWVIVVLLGAVVYIVWHGLQITRAQHQTAMAALSSLGDTHRLGYEGLTMAVQRLEQRVRQLEERR*
Ga0153954_1000024154	3300011418	Attine Ant Fungus Gardens	MIDIAIWVIVILLAAIVYIVWSGLKIARDQHRSTMTALASLGNTHTLGYEALTLTVQRLDHRVRQLEERQ*
Ga0153956_10706052	3300012090	Attine Ant Fungus Gardens	LAAIVYIVWSGLKIARDQHRSTMTALASLGNTHTLGYEALTLTVQRLDHRVRQLEERQ*
Ga0164309_115652441	3300012984	Soil	LGMTEIAIWVIVILLGAIVYIVWHGLKITREQHQSTMAALSSLGDTHKLGYEALTLAMQRLEQRVRQLEERR*
Ga0164308_115173812	3300012985	Soil	LGAVVYIVWHGLQITRAQHQSAMAALSSLGDTHKLGYEGLTMAVQRLEQRVRQLEERR*
Ga0182024_126300341	3300014501	Permafrost	MIEIAVWVIVVLLGAIVYIVWHGFKFARDQHQSTMAVLSSLGDTHKLGYQGLTLVVQRLEQRIKQLEERR*
Ga0167644_100418510	3300015206	Glacier Forefield Soil	MIEIAVWVIVVLLGAVVYIVWHGLKLAHDQHQSIMAALSSLGDTHKLGYQGLTLVVQRLEQRVKQLEERR*
Ga0182036_104646321	3300016270	Soil	MINIAIWAIVVPLGAIAYIVWYGLKITRAQHKGTMAALSSLGDTHRLGYVALTLAVQRLETRVKELERRR
Ga0182041_114884492	3300016294	Soil	MIDIDVWAIVALLASVVYIVWHGLQIARAQHHATMASLASLGDTHKLGYEALTMALQRLEQRVKELEERR
Ga0182033_122250072	3300016319	Soil	MIDIAICFLVLPLGAIVYIVWHGLKITRAQHKGTMAALSSLGDTHRRGYVALTLAVQRLEKRVKELEQAGGDSDMSAPHRR
Ga0182032_116650622	3300016357	Soil	GMIDIAIWAIVVPLGAIAYIVWNGLKIRAQHKSTMAALSSLGDTHRRGYVALTLAVQRLEKRLKELEGRR
Ga0182040_110599301	3300016387	Soil	MIDIAICFLVLPLGAIVYIVSHGLKITRAQHKGIVAAQSSLGDTHRRGYLALTLAVQRLEKRVK
Ga0182037_107780152	3300016404	Soil	MIDIAICFLVLPLGAIVYIVWHGLKITRAQQKGTMAALSSLGDTHRRGYVALTLAVQRLEKRVKELEQGG
Ga0182037_119915001	3300016404	Soil	MDPRLLMIEIAIWVIVVLLGAVVYIVWHGLQIARAQHHSTMAALSSLGDTHKLGYEALTLAVQRLERRVNQLEERR
Ga0182038_113676821	3300016445	Soil	MIDIAICFLVLPLGAIVYIVWHGLKITRAQHKGTMAALSSLGDTHRRGYVALTLAVQRLEKRVKELEQGGGDSDMSAPHRRR
Ga0187802_102624511	3300017822	Freshwater Sediment	MTNIAIWVIVILLGAIVYIVWHGLKITRDQHQSTMAALSSLGDTHKLGYEALTLAMQRLEQRVRQLEERR
Ga0187820_11353722	3300017924	Freshwater Sediment	MITIAIWVIVVLLGAIVYIVWHGLQITRAQHQSTMAGLASLGDTHRLGYDALTLTVQRLEQRVNQLEERR
Ga0187783_100890294	3300017970	Tropical Peatland	MIDIAIWVIAVPLGAIAYIIWHGLKIARAQHQSTMAALSSLGDTRRLGYEALTRSVSYLEQRVKELEQRGRQAE
Ga0187783_101030433	3300017970	Tropical Peatland	MTEIAIWVIVILLGAIVYIVWHGLKIARDQHQSTMAALSSLGDTHKLGYEALTLAMQRLEQRVRQLEERR
Ga0187783_102367062	3300017970	Tropical Peatland	MFNRNLFTFIVVFCYCGKQPFDTNDVVTNPRLLMIEIAIWLIVVLLGAVVYIVWHGLQITRAQHHSTMAALASLGDTHRLGYDALTLAVQRLEQRVNQLEERR
Ga0187781_104948571	3300017972	Tropical Peatland	MTTEIAIWAIVVLLASIVYIVWRGLQITRAQHHATISALSSLGATHKLGYEALTIALQRLEQRVKQLEERR
Ga0187823_101310531	3300017993	Freshwater Sediment	MITIAIWVIVVLLGAIVYIVWHGLQITRAQHQSTMAGLASLGDTHRLGYDALTLTVQRLE
Ga0187815_100753161	3300018001	Freshwater Sediment	MTNIAIWVIVILLGAIVYIVWHGLKITRDQHQSTMAALSSLGDTHKLGYEALTLAMQRLE
Ga0210407_100803295	3300020579	Soil	MFDIAIWVIVVPLGAIAFIVWHGLKITRAQHQSAMATLSTLGDTHRLGYETLAMSVRRLEQRVKELEGRR
Ga0210407_101469233	3300020579	Soil	MMEIAVWVIVVLLGAVVYIVWHGFKFARDQRQSTMAALSSLGDTHKLGYQGLTLVVQRLEQRVKQLEERR
Ga0210407_112964252	3300020579	Soil	MIEIAVWVIVVLLGAIVYIVWHGFKFARDQHQSTMAALSSLGDTHKLGYQGLTLVVQRLEQRVKQLEERR
Ga0210403_106852952	3300020580	Soil	MSKLILRLRIMEIAVWVIVVLLGAVVYIVWHGFKFARDQRQSTMATLSSLGDTHRLGYQGLTLVVQRLEQRVKQLEGPR
Ga0210399_113201821	3300020581	Soil	MEIAVWVIVVLLGAVVYIVWHGFKFARDQRQSTMATLSSLGDTHRLGYQGLTLVVQRLEQRVKQLEGRR
Ga0210395_105820241	3300020582	Soil	MTDIAIWVIVVLLGAIVYIVWHGLQLTRAQHQSTMAGLSSLGDTHKLGYEGLTMAMQRLEQRVKQLEERR
Ga0210395_108014891	3300020582	Soil	MEIAVWVIVLLLGAVVYIVWHGFKFARDQRQSTMATLSSLGDTHRLGYQGLTLVVQRLEQRVKQLE
Ga0210401_104137751	3300020583	Soil	LGAVVYIVWHGFKFARDQRQSTMATLSSLGDTHRLGYQGLTLVVQRLEQRVKQLEGRR
Ga0210404_105872751	3300021088	Soil	MMEIAVWVIVVLLGAVVYIVWHGFKFARDQRQSTMATLSSLGDTHRLGYQGLTLVVQRLEQRVKQLEERR
Ga0210396_103514281	3300021180	Soil	TRLDVADLIRQRRHRSRGFGMFDIAIWVIVVPLGAIAFIVWHGLKITRAQHQSAMATLSTLGDTHRLGYETLAMSVRRLEQRVKELEGRR
Ga0210388_109508921	3300021181	Soil	MMEIAVWVIVVLLGAVVYIVWHGFKFARDQRQSTMATLSSLGDTHRLGYQGLTLVVQRLEQRVKQLEGPR
Ga0210388_111894141	3300021181	Soil	MLDIAIWVIVLLLGAVVYIVWHGLQITRAQHQSAMASLSSLGDTHKLGYEGLTMAVQRLEQRVKQLEERR
Ga0213876_100387342	3300021384	Plant Roots	VLNSVLTNSVFTNPSWLMIDIAVWLIVVLLGAVVYIVWHALQITRAQHQSTMTALSSLGDTHKLGYEGLTLSVQRLEQRVKQLEERR
Ga0210393_108628411	3300021401	Soil	LGAIVYIVWHGLQYTRAQHQSTMAGLSSLGDTHKLGYEALTMAMQRLEQRVKQLEERR
Ga0210393_114477061	3300021401	Soil	VLLGAIVYIVWHGLQLTRAQHQSTMAGLSSLGDTHKLGYEGLTMAMQRLEQRVKQLEERR
Ga0210393_116398901	3300021401	Soil	MEIAVWVIVLLLGAVVYIVWHGFKFARDQRQSTMATLSSLGDTHRLGYQGLTLVVQRLEQRVKQLEGRR
Ga0210385_113113162	3300021402	Soil	MEIAVWVIVVLLGAVVYIVWHGFKFARDQRQSTMATLSSLGDTHRLGYQGLTLVVQRLEQRVKQLEERR
Ga0210397_102968322	3300021403	Soil	LRLRMMEIAVWVIVVLLGAVVYIVWHGFKFARDQRQSTMATLSSLGDTHRLGYQGLTLVVQRLEQRVKQLEGRR
Ga0210397_105548671	3300021403	Soil	LLLGAVVYIVWHGLQIMRAQHQSTMAGLSSLGDTHKLGYEALTMAMQRLEQRVKQLEERR
Ga0210397_106114392	3300021403	Soil	AIWVIVLLLGAIVYIVWHGLQITRAQHQSTMAGLSSLGDTHKLGYEALTLTMQRLEQRVRQLEERR
Ga0210387_102476913	3300021405	Soil	MMEIAVWVIVVLLGAVVYIVWHGFKFARDQRQSTMAALSSLGDTHKLGYQGLTLVVQRLEQRVKQLEER
Ga0210387_106056882	3300021405	Soil	LRMMEIAVWVIVVLLGAVVYIVWHGFKFARDQRQSTMATLSSLGDTHRLGYQGLTLVVQRLEQRVKQLEGPR
Ga0210387_117612181	3300021405	Soil	TEPRLHMTEIAIWLIVVLLGAIVYIVWHGLQYTRAQHQSTMAGLSSLGDTHKLGYEALTMAMQRLEQRVKQLEERR
Ga0210384_115222461	3300021432	Soil	MSKLILRLRIMEIAVWVIVVLLGAVVYIVWHGFKFARDQRQSTMATLSSLGDTHRLGYQGLTLVVQRLEQRVKQLEGRR
Ga0210390_108143222	3300021474	Soil	MTEIAIWVIVVLLGAIVYIVWHGLQYTRAQHQSTMAGLSSLGDTHKLGYEALTLTMQRLEQRVRQLEERR
Ga0210390_111762552	3300021474	Soil	RMTDIAIWVIVVLLGAIVYIVWHGLQLTRAQHQSTMAGLSSLGDTHKLGYEGLTMAMQRLEQRVKQLEERR
Ga0210390_115774171	3300021474	Soil	VILLGAIVYIVWHGLKITRDQHQSTMAALSSLGDTHKLGYEALTLTMQRLEQRVRQLEER
Ga0210398_100818241	3300021477	Soil	MIDIAIWVIVLLLGAVVYIVWHGLQITRAQHQSAMAALSSLGDTHKLGYEGLTMSMQRLEQRVRQLEERR
Ga0210409_112708312	3300021559	Soil	MMEIAVWVIVVLLGAVVYIVWHGFKFARDQRQSTMATLSSLGDTHRLGYQGLTLVVQRLEQRVKQLEGRR
Ga0126371_117821761	3300021560	Tropical Forest Soil	MIDIAIWVIVLLLGAVVYIVWHGLQIARAQHQSTMTALSSLGDTHKLGYEGLTLAVQRLEQR
Ga0242658_12215821	3300022530	Soil	QSSASTGLEMIDIAIWVIVLLLGAIVYIVWHGLQITRAQHQSTMAGLSSLGDTHKLGYEALTLTMQRLEQRVRQLEERR
Ga0242665_103629021	3300022724	Soil	LRMMEIAVWVIVVLLGAVVYIVWHGFKFARDQRQSTMATLSSLGDTHRLGYQGLTLVVQRLEQRVKQLEGRR
Ga0242654_100913142	3300022726	Soil	QSSASTGLEMIDIAVWVIVILLGAVVYIVWHGLQITRAQHQSTMSGLSSLGDTHKLGYEALTLTMQRLEQRVRQLEERR
Ga0208193_10462462	3300025463	Peatland	MLDIAIWVIVLLLGAVVYIVWNGLQITRAQHQSAMASLSSLGDTHKLGYEGLTMAVQRLEQRVKQLEDRR
Ga0207707_105147432	3300025912	Corn Rhizosphere	MIGIAIWVIVVLLGAVVYIVWRGLQVTRAQHQSTMAALSSLGDTHKLGYEALTLAVQRLEQRVRQLEERG
Ga0207695_101107945	3300025913	Corn Rhizosphere	MITIAIWVIVVLLGAVVYIVWHGLQITRAQHQSTMASLASLGDTHRLGYDALTLSVQRLEQRVHQLEERR
Ga0207663_113645011	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MLDIAIWVIVLLLGAVVYIVWHGLQITRAQHQSAMAALSSLGDTHKLGYEGLTMAVQRLEQRVRQLEE
Ga0208859_10102051	3300027069	Forest Soil	MIDIAIWVIVLLLGAIVYIVWHGLQITRAQHQSTMAGLSSLGDTHKLGYEALTLTMQRLEQRVRQLEERR
Ga0209732_10374502	3300027117	Forest Soil	MIDIAIWVIVLLLGAVVYIVWHGLQIMRAQHQSTMAGLSSLGDTHKLGYEALTLTMQRLEQRVRQLEERR
Ga0209218_10481731	3300027505	Forest Soil	MTDIAIWVIVVLLGAIVYIVWHGLQLTRAQHQSTMAGLSSLGDTHKLGYEGLTMAMQ
Ga0208042_11152532	3300027568	Peatlands Soil	MTDIAIWVIVILLGAIVYIVWHSLKITRDQHQSTMAALSSLGDTHKLGYEALTLAMQRLEQRVRQLEERR
Ga0209221_11293831	3300027609	Forest Soil	MLDIAIWVIVLLLGAVVYIVWHGLQITRAQHQSTMAGLSSLGDTHKLGYEGLTMTVQRLEQRVRQLEERR
Ga0209530_10657141	3300027692	Forest Soil	MLDIAIWVIVLLLGAVVYIVWNGLQITRAQHQSAMASLSSLGDTHKLGYEGLTMAVQ
Ga0209139_100493372	3300027795	Bog Forest Soil	MLDIAIWVIVLLLGAVVYIVWHGLQITRAQHQSAMAALSSLGDTHKLGYEGLTMSMQRLEQRVKQLEERR
Ga0209167_107253732	3300027867	Surface Soil	MITIAIWVIVVLLGAIVYIVWHGLQITRAQHQSNMAALASLGDTHRLGYDALTLTVQRLEQRVNQLEERR
Ga0209006_101549222	3300027908	Forest Soil	MIDIAIWVIVLLLGAVVYIVWHGLQIMRAQHQSTMAGLSSLGDTHKLGYEALTLTMQRLEQRVKQLEERR
Ga0209006_107923301	3300027908	Forest Soil	MIDIAIWVIVLLLGAVVYIVWHGLQIMRAQHQSTMAGLSSLGDTHKLGYEALTLTMQRLE
Ga0209006_112877901	3300027908	Forest Soil	SLLMRTQSSASTRLEMIDIAIWVIVLLLGAVVYIVWHGLQIMRAQHQSTMAGLSSLGDTHKLGYEALTMAMQRLEQRVKQLEERR
Ga0209168_102992071	3300027986	Surface Soil	MIDIAIWVIVILLGAIVYIVWRGLKITRDQHQSTMAALSSLGDTHKLGYEALTLAMQRLEQRVRQLEERR
Ga0308309_103816961	3300028906	Soil	SRLMRTQSWASTGLEMIDIAIWVIVLLLGAIVYIVWHGLQITRAQHQSTMAGLSSLGDTHKLGYEALTLTMQRLEQRVRQLEERR
Ga0311356_118796031	3300030617	Palsa	AVWVIVVLLGAIVYIVWHGFKFARDQHQSTMAVLSSLGDTHKLGYQGLTLVVQRLEQRIKQLEERR
Ga0265753_11079201	3300030862	Soil	LGAIVYIVWHGLQITRAQHQSTMAGLSSLGDTHKLGYEALTLTMQRLEQRVRQLEERR
Ga0170834_1059962862	3300031057	Forest Soil	METAVWIIVVLLGAVAYIVWHGFKFARDQRQSTMATLSSLGDTHRLGYQGLTLVVQRLEQRVKQLEARR
Ga0265760_102365171	3300031090	Soil	VLLGAVVYIVWHGFKFARDQRQSTMATLSSLGDTHRLGYQGLTLVVQRLEQRVKQLEERR
Ga0170824_1164524191	3300031231	Forest Soil	MIDIAIWVIVFLLGAVVYIVWHGLQIMRAQHQSTMAGLSSLGDTHKLGYEALTMAMQRLEQRVKQLEERR
Ga0170824_1271314092	3300031231	Forest Soil	MIDIAVWVIVLLLGAVVYIVWHGLQITRAQHQSTMAGLSSLGDTHKLGYEALTLTMQRLEQRVKQLEERR
Ga0302325_128119351	3300031234	Palsa	MIDIAVWVIVVLLGAIVYIVWHGFKFARDQHQSTMAVLSSLGDTHKLGYQGLTLVVQRLEQRIKQLEERR
Ga0170818_1012149171	3300031474	Forest Soil	IVLLLGAVVYIVWHGLQIMRAQHQSTMAGLSSLGDTHKLGYEALTLTMQRLEQRVKQLEERR
Ga0318561_107269931	3300031679	Soil	MSSPTVRPGMIDIAICFLVLPLGAIVYIVWHGLKRTRAQHKGTMAALSSLGDTHRRGYVALTLAVQRLEKRVKELE
Ga0318574_105950931	3300031680	Soil	MIDIAVWAIVVLLASIVYIVWHGLQIARAQHHATMASLASLGDTHKLGYEALTMALQRLEQRVKELEGRR
Ga0318560_106292252	3300031682	Soil	MIDIAVWAIVALLASVVYIVWHGLQIARAQHHATMASLASLGDTHKLGYEALTMALQRLEQRVKELEERR
Ga0310686_1013903714	3300031708	Soil	MIEIAVWVIVLLLGAVVYIVWHGLKLARDQHQSIMAALSSLGDTHKLGYQGLTLVVQRLEQRVKQLEERR
Ga0310686_1032847153	3300031708	Soil	MIDIAIWVIVLLLGAIVYIVWHGLQITRAQHQSTMAGLSSLGDTHKLGYEALTLTMQRLEHRVRQLEERR
Ga0310686_1084683233	3300031708	Soil	MRTMLATEPRLNMTEIAIWLIVVLLGAIVYIVWHGLQYTRAQHQSTMAGLSSLGDTHKLGYEALTMAMQRLEQRVKQLEERR
Ga0310686_1097008832	3300031708	Soil	TQSSASTRLDMIDIAIWVIVLLLGAVVYIVWHGLQITRAQHQSTMAGLSSLGDTHKLGYEGLTMTVQRLEQRVRQLEERR
Ga0310686_1117709651	3300031708	Soil	MIEIAVWVIAVLLGAVVYIVWHGSKLARDLRQSTTAALSSLGDTHKLGYQGLTLVVQRLEQRVKQLEERR
Ga0310686_1174061422	3300031708	Soil	MIDIAVWVIVILLGAIVYIVWHGFKFARDQHQSTMAVLSSLGDTHKLGYQGLTLVVQRLEQRIKQLEERR
Ga0307476_105403341	3300031715	Hardwood Forest Soil	MRTMLATEPRLRMTELAIWVIVVLLGAIVYIVWHGLQLARAQHQSTMAGLSSLGDTHKLGYEALTMAMQRLEQRVKQLEERR
Ga0307474_115899351	3300031718	Hardwood Forest Soil	STRLEMIDIAIWVIVFLLGAIVYIVWHGLQITRAQHQSTMAGLSSLGDTHKLGYEALTLTMQRLEQRVKQLEERR
Ga0306917_105951772	3300031719	Soil	MIDIAVWAIVALLASVVYIVWHGLQITRAQHHATMASLASLGDTHKLGYEGLTMALQRLEQRVKELEERR
Ga0306917_115682812	3300031719	Soil	MIEIAIWVIVVLLGAIVYIVWHGLKITIAEHGSTMAALASLGDTHKLGYEALTMAMQRLEQRVKELEQRR
Ga0318566_104345651	3300031779	Soil	GFGMIDIAVWAIVALLASVVYIVWHGLQIARAQHHATMASLASLGDTHKLGYEGLTMALQRLEQRVKELEERR
Ga0318557_104098561	3300031795	Soil	MIDIAICFLVLPLGAIVYIVWHGLKITRAQHKGTMAALSSLGDTHRRGYVALTLAVQRLEKRVKELEQGGGDS
Ga0306925_107671441	3300031890	Soil	FYRHFRYCVEQPIDRRHVLTDPRLLMIEIAIWVIVVLLGAVVYIVWHGLQIARAQHHSTMAALSSLGDTHKLGYEALTLAVQRLERRVNQLEERR
Ga0306925_121828052	3300031890	Soil	MIDIAVWAIVVLLASIVYIVWHGLQIARAQHHATMASLASLGDTHKLGYEALTMALQRLEQRVKELEERR
Ga0306925_122665232	3300031890	Soil	MMEIAIWAIVALLASVVYIVWHGIQITRAQHHATMASLASLGDTHKLGYEGLTMALQRLEQRVKE
Ga0306923_109996341	3300031910	Soil	MIDIAVWAIVALLASVVYIVWHGLQIARAQHHATMASLASLGDTHKLGYEGLTMALQRLEQRVKELEERR
Ga0306923_114457571	3300031910	Soil	VLPLGAIAYIVWHGLKITRAQYKGTMTALLSLGHTHRLGYVALTLAVQRLETRVKELERR
Ga0306921_101962552	3300031912	Soil	MIDIAVWAIVALLASVVYIVWHGLQIARAQHHATMASLASLGDTHKLGYEALTMALQRLEQREKELEGRR
Ga0306921_104865583	3300031912	Soil	MMEIAIWAIVALLASVVYIVWHGLQITRAQHHATMASLASLGDTHKLGYEGLTMALQRLEQRVKELEERR
Ga0306921_121945851	3300031912	Soil	MIDIAICFIVLPLGAIAYIVWHGLKITRAQYKGTMTALLSLGHTHRLGYVALTLAVQRLETRVKELERRR
Ga0308175_1018089932	3300031938	Soil	MLDIAIWLIVILLGAVVYIVWHGLQIARAQHQSTMTALSSLSDTHKLGYEGLTLAVQRLEQRVRQLEERR
Ga0308174_101435692	3300031939	Soil	MLDIAIWLIVVLLGAVVYIVWHGLQIARAQHQSTMTALSSLSDTHKLGYEGLTLAVQRLEQRVRQLEERR
Ga0306926_105885872	3300031954	Soil	MIEIAIWVIVVLLGAVVYIVWHGLQIARAQHHSTMAALSSLRDTHKLGYEALTLAVKRLERRVNKLEERR
Ga0306926_112702951	3300031954	Soil	MSSPPRGFGMIDIAIWAIVVPLGAIAYIVWNGLKIRAQHKSTMAALSSLGDTHRRGYVALTLAVQRLKKRLKELEGRR
Ga0318563_100907801	3300032009	Soil	VEQPIERRQVLTDPRLLMIEIAIWVIVVLLGAIVYVVWHGLQIARAQHHSTMAALSSLGDTHKLGYEALTLAVQRLERRVNQLEERR
Ga0318563_107607241	3300032009	Soil	MIEIAIWVIVVLLGAVVYIVWHGLQIARAQHHSTMAALSSLGDTHKLGYEALTLAVQRLERRVNQLEERR
Ga0318563_108114042	3300032009	Soil	MIDIAICFLVLPLGAIVYIVWHGLKITRAQHKGTMAALSSLGDTHRRGYVALTLAVQR
Ga0318556_106062731	3300032043	Soil	MIDIAICFLVLPLGAIVYIVWHGLKITRAQHKGTMAALSSLGDTHRRGYVALTLEKRVKELEKRR
Ga0318533_103149672	3300032059	Soil	MIDIAICFLVLPLGAIVYIVWHGLKITRAQHKGTMAALSSLGDTHRRGYVALTLAVQRLEKRVKELEQGEGESDM
Ga0306924_107075932	3300032076	Soil	MSSPTVRPGMIDIAICFLVLPLGAIVYIVWHGLKITRAQHKGTMAALSSLGDTHRRGYVALTLEKRVKELEKRR
Ga0318525_103980242	3300032089	Soil	MIDIAICFIVLPLGAIAYIVWHGLKITRAQYKGTMAALLSLGDTHRLGYVALTLAVQRLEKRVKELERRR
Ga0307471_1030802062	3300032180	Hardwood Forest Soil	MIQIAVWVIVVLLGAVVYIVWHGFKFTRDQCQSTMAALSSLGDTHKLGYQGLTLVVQRLEQRVRQLEEQR
Ga0306920_1012076482	3300032261	Soil	MIDIAICFLVLPLGAIAYIVWRGLKITRAQHQSTIAALSSLGDTHRLGYEALTMSVRRLDQRVKKLEERR
Ga0306920_1036680211	3300032261	Soil	MIDIAICFLVLPLGAIAYIVWHGLKITRAQYKGTMAALLSLGDTHRLGYVALTLAVQRLEKRVKELERRR
Ga0335074_103591251	3300032895	Soil	MTDIAIWVIVILLGAIVYIVWRGLKITRDQHQSTMAALSSLGDTHKLGYEALTLAMQRLEQRVRQLEERR
Ga0335074_105253491	3300032895	Soil	MTDIAIWVIVILLGAIVYIVWRGLKITRDQHQSTMAALSSLGDTHKLGYEALTLAMQRLEQRVRQLEERG
Ga0335074_114961011	3300032895	Soil	ILRLYMTDIAIWVIVVLLGAIVYIVWRGLKITRDQHQSTMAALSSLGDTHKLGYEALTLAVQRLEQRVRQLEERG
Ga0335075_100170217	3300032896	Soil	MTDIAIWLIVILLGAVVYIVWRGLKITRDQHQSTMAALSSLGDTHKLGYEALTLAMQRLEQRVRQLEERG
Ga0335075_100532886	3300032896	Soil	MTDIAIWVIVVLLGAIVYIVWRGLKITRDQHQSTMAALSSLGDTHKLGYEALTLAVQRLEQRVRQLEERG
Ga0335073_100110868	3300033134	Soil	MSLSIPGLRMIDIAIWLIVVLLGAIVYIVWRGLQITRAQHHSTMAALASLGDTHKLGYEALTLAVQRLEQRVSQLEERR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039775

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences