Metagenome / Metatranscriptome Family F039710

Basic Information
Family ID	F039710
Family Type	Metagenome / Metatranscriptome
Number of Sequences	163
Average Sequence Length	68 residues
Representative Sequence	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRAAQPEPKA
Number of Associated Samples	137
Number of Associated Scaffolds	163

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	44.79 %
% of genes near scaffold ends (potentially truncated)	40.49 %
% of genes from short scaffolds (< 2000 bps)	92.02 %
Associated GOLD sequencing projects	130
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (71.166 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.926 % of family members)
Environment Ontology (ENVO)	Unclassified (32.515 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.331 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.29% β-sheet: 0.00% Coil/Unstructured: 39.71%
Feature Viewer

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Pfam ID	Name	% Frequency in 163 Family Scaffolds
PF08530	PepX_C	27.61
PF13493	DUF4118	6.13
PF07690	MFS_1	4.29
PF03401	TctC	1.84
PF08447	PAS_3	0.61
PF00903	Glyoxalase	0.61
PF13511	DUF4124	0.61

COG ID	Name	Functional Category	% Frequency in 163 Family Scaffolds
COG2936	Predicted acyl esterase	General function prediction only [R]	27.61
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.84

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.17 %
Unclassified	root	N/A	28.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.17 %
Unclassified	root	N/A	28.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.17 %
Unclassified	root	N/A	28.83 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	52.15 %
Unclassified	root	N/A	28.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.23 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	49.69 %
Unclassified	root	N/A	28.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.34 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.07 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.83 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.52 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.07 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.45 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.83 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.52 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.07 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.84 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.07 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.23 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.61 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.07 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.23 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.61 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.61 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908016\|OU_2_1_1_newblercontig23397	Not Available	508	Open in IMG/M
2170459010\|GIO7OMY01EISB5	Not Available	501	Open in IMG/M
2199352025\|deepsgr__Contig_60610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1309	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101597016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1894	Open in IMG/M
3300000787\|JGI11643J11755_11388934	Not Available	603	Open in IMG/M
3300000789\|JGI1027J11758_12483959	Not Available	628	Open in IMG/M
3300002075\|JGI24738J21930_10036524	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300002568\|C688J35102_119163361	Not Available	647	Open in IMG/M
3300004114\|Ga0062593_100814327	Not Available	931	Open in IMG/M
3300004153\|Ga0063455_100989736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300004153\|Ga0063455_101018263	Not Available	602	Open in IMG/M
3300004156\|Ga0062589_102152875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	570	Open in IMG/M
3300004479\|Ga0062595_100166291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1311	Open in IMG/M
3300004480\|Ga0062592_100444196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1050	Open in IMG/M
3300005093\|Ga0062594_102513743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300005164\|Ga0066815_10010460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1139	Open in IMG/M
3300005169\|Ga0066810_10006986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1547	Open in IMG/M
3300005328\|Ga0070676_10297045	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300005338\|Ga0068868_100021022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4913	Open in IMG/M
3300005339\|Ga0070660_100360692	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300005339\|Ga0070660_100929791	Not Available	734	Open in IMG/M
3300005347\|Ga0070668_101111703	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300005353\|Ga0070669_100088517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2318	Open in IMG/M
3300005354\|Ga0070675_101253960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300005356\|Ga0070674_100822625	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300005356\|Ga0070674_102072321	Not Available	519	Open in IMG/M
3300005364\|Ga0070673_101399285	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300005455\|Ga0070663_100493270	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300005455\|Ga0070663_101827414	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300005466\|Ga0070685_10198197	All Organisms → cellular organisms → Bacteria	1303	Open in IMG/M
3300005539\|Ga0068853_100289251	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300005615\|Ga0070702_100290008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1127	Open in IMG/M
3300005718\|Ga0068866_10104685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1567	Open in IMG/M
3300005719\|Ga0068861_100363449	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300005719\|Ga0068861_100546809	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300005841\|Ga0068863_102221538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	559	Open in IMG/M
3300005842\|Ga0068858_101157970	Not Available	760	Open in IMG/M
3300005843\|Ga0068860_100078499	All Organisms → cellular organisms → Bacteria	3139	Open in IMG/M
3300005843\|Ga0068860_101872267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300006028\|Ga0070717_10654283	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300006028\|Ga0070717_10890884	Not Available	810	Open in IMG/M
3300006038\|Ga0075365_10046860	All Organisms → cellular organisms → Bacteria	2840	Open in IMG/M
3300006038\|Ga0075365_10893458	Not Available	626	Open in IMG/M
3300006042\|Ga0075368_10459280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	565	Open in IMG/M
3300006177\|Ga0075362_10469749	Not Available	641	Open in IMG/M
3300006178\|Ga0075367_10448482	Not Available	818	Open in IMG/M
3300006580\|Ga0074049_12991722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	673	Open in IMG/M
3300006581\|Ga0074048_13322030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300006844\|Ga0075428_100422666	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300006846\|Ga0075430_100321291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1279	Open in IMG/M
3300006847\|Ga0075431_100854764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	881	Open in IMG/M
3300006854\|Ga0075425_100824988	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300006871\|Ga0075434_102264530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	547	Open in IMG/M
3300006904\|Ga0075424_100118359	All Organisms → cellular organisms → Bacteria	2798	Open in IMG/M
3300009092\|Ga0105250_10048482	All Organisms → cellular organisms → Bacteria	1704	Open in IMG/M
3300009100\|Ga0075418_10397119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1474	Open in IMG/M
3300009143\|Ga0099792_10186361	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300009148\|Ga0105243_12992036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300009148\|Ga0105243_13068661	Not Available	506	Open in IMG/M
3300009156\|Ga0111538_13911933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	515	Open in IMG/M
3300009156\|Ga0111538_14027050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300009162\|Ga0075423_10478327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1310	Open in IMG/M
3300009177\|Ga0105248_11526632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	756	Open in IMG/M
3300009545\|Ga0105237_10459255	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300009553\|Ga0105249_10203848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1937	Open in IMG/M
3300009553\|Ga0105249_10457292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1316	Open in IMG/M
3300010044\|Ga0126310_10527374	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300010154\|Ga0127503_10133301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300010397\|Ga0134124_11670459	Not Available	669	Open in IMG/M
3300010400\|Ga0134122_11333336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	727	Open in IMG/M
3300010403\|Ga0134123_12151646	Not Available	619	Open in IMG/M
3300011000\|Ga0138513_100045186	Not Available	662	Open in IMG/M
3300011332\|Ga0126317_10449172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554	Open in IMG/M
3300012212\|Ga0150985_112147572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	627	Open in IMG/M
3300012212\|Ga0150985_117116359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	654	Open in IMG/M
3300012915\|Ga0157302_10017620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1767	Open in IMG/M
3300012924\|Ga0137413_10544458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	861	Open in IMG/M
3300012939\|Ga0162650_100042592	Not Available	727	Open in IMG/M
3300012951\|Ga0164300_10019702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2314	Open in IMG/M
3300012951\|Ga0164300_10195979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	986	Open in IMG/M
3300012951\|Ga0164300_10281969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	860	Open in IMG/M
3300012951\|Ga0164300_10534782	Not Available	678	Open in IMG/M
3300012958\|Ga0164299_10487822	Not Available	816	Open in IMG/M
3300012961\|Ga0164302_11224348	Not Available	602	Open in IMG/M
3300012985\|Ga0164308_10498404	Not Available	1018	Open in IMG/M
3300012986\|Ga0164304_11710233	Not Available	526	Open in IMG/M
3300012988\|Ga0164306_10066782	All Organisms → cellular organisms → Bacteria	2239	Open in IMG/M
3300012989\|Ga0164305_12166575	Not Available	511	Open in IMG/M
3300013306\|Ga0163162_11623766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	738	Open in IMG/M
3300013306\|Ga0163162_13294293	Not Available	517	Open in IMG/M
3300014326\|Ga0157380_11290653	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	777	Open in IMG/M
3300015200\|Ga0173480_11085716	Not Available	533	Open in IMG/M
3300015373\|Ga0132257_101140210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	985	Open in IMG/M
3300015374\|Ga0132255_100493577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1798	Open in IMG/M
3300017792\|Ga0163161_10320762	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300018000\|Ga0184604_10041965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1224	Open in IMG/M
3300018028\|Ga0184608_10006177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3902	Open in IMG/M
3300018031\|Ga0184634_10005024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	4406	Open in IMG/M
3300018031\|Ga0184634_10500948	Not Available	542	Open in IMG/M
3300018055\|Ga0184616_10350354	Not Available	556	Open in IMG/M
3300018066\|Ga0184617_1024918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1367	Open in IMG/M
3300018067\|Ga0184611_1052849	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300018081\|Ga0184625_10084217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1630	Open in IMG/M
3300018081\|Ga0184625_10371784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	741	Open in IMG/M
3300018082\|Ga0184639_10041617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2361	Open in IMG/M
3300018083\|Ga0184628_10140873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1253	Open in IMG/M
3300018466\|Ga0190268_10485730	Not Available	832	Open in IMG/M
3300018469\|Ga0190270_13464290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	501	Open in IMG/M
3300019233\|Ga0184645_1220010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	912	Open in IMG/M
3300019255\|Ga0184643_1353711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	686	Open in IMG/M
3300019356\|Ga0173481_10039130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1571	Open in IMG/M
3300019356\|Ga0173481_10451609	Not Available	642	Open in IMG/M
3300019361\|Ga0173482_10727456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300021078\|Ga0210381_10044422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1308	Open in IMG/M
3300021080\|Ga0210382_10235480	Not Available	799	Open in IMG/M
3300021951\|Ga0222624_1435993	Not Available	601	Open in IMG/M
3300022756\|Ga0222622_11153879	Not Available	570	Open in IMG/M
3300025905\|Ga0207685_10343552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	750	Open in IMG/M
3300025919\|Ga0207657_10034596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4541	Open in IMG/M
3300025931\|Ga0207644_10259854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1388	Open in IMG/M
3300025981\|Ga0207640_10664013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	890	Open in IMG/M
3300026023\|Ga0207677_11339356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	658	Open in IMG/M
3300026067\|Ga0207678_10584879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	978	Open in IMG/M
3300026067\|Ga0207678_11640045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300026095\|Ga0207676_11332181	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300026555\|Ga0179593_1261071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1970	Open in IMG/M
3300027381\|Ga0208983_1088921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	577	Open in IMG/M
3300027401\|Ga0208637_1022048	Not Available	702	Open in IMG/M
3300027523\|Ga0208890_1065137	Not Available	590	Open in IMG/M
3300027616\|Ga0209106_1118549	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300027866\|Ga0209813_10296275	Not Available	627	Open in IMG/M
3300028707\|Ga0307291_1082388	Not Available	794	Open in IMG/M
3300028710\|Ga0307322_10021587	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300028712\|Ga0307285_10101341	Not Available	761	Open in IMG/M
3300028721\|Ga0307315_10070469	All Organisms → cellular organisms → Bacteria → Proteobacteria	998	Open in IMG/M
3300028754\|Ga0307297_10089808	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300028755\|Ga0307316_10155379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	816	Open in IMG/M
3300028755\|Ga0307316_10158521	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300028771\|Ga0307320_10464788	Not Available	511	Open in IMG/M
3300028784\|Ga0307282_10509144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	584	Open in IMG/M
3300028790\|Ga0307283_10155649	Not Available	633	Open in IMG/M
3300028793\|Ga0307299_10060133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1404	Open in IMG/M
3300028793\|Ga0307299_10117382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	997	Open in IMG/M
3300028796\|Ga0307287_10354775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	553	Open in IMG/M
3300028807\|Ga0307305_10035369	All Organisms → cellular organisms → Bacteria → Proteobacteria	2290	Open in IMG/M
3300028812\|Ga0247825_11280483	Not Available	536	Open in IMG/M
3300028872\|Ga0307314_10019371	All Organisms → cellular organisms → Bacteria	1543	Open in IMG/M
3300028872\|Ga0307314_10258690	Not Available	543	Open in IMG/M
3300028884\|Ga0307308_10287069	All Organisms → cellular organisms → Bacteria → Proteobacteria	788	Open in IMG/M
3300028889\|Ga0247827_11306005	Not Available	508	Open in IMG/M
3300031015\|Ga0138298_1628729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300031226\|Ga0307497_10216116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	839	Open in IMG/M
3300031231\|Ga0170824_123459953	Not Available	576	Open in IMG/M
3300032013\|Ga0310906_11425994	Not Available	509	Open in IMG/M
3300033412\|Ga0310810_10056655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4761	Open in IMG/M
3300033550\|Ga0247829_10399649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1129	Open in IMG/M
3300033550\|Ga0247829_11359169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300033551\|Ga0247830_10609733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	864	Open in IMG/M
3300033551\|Ga0247830_10843237	Not Available	730	Open in IMG/M
3300034147\|Ga0364925_0186202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	761	Open in IMG/M
3300034680\|Ga0370541_005674	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300034681\|Ga0370546_011060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1072	Open in IMG/M
3300034681\|Ga0370546_028797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	779	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.80%
Host-Associated	Host-Associated	36.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.53%
Plants	Host-Associated → Plants	36.20%
Aquatic	Environmental → Aquatic	11.66%
Unclassified	Environmental → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.27%
Sediment	Environmental → Aquatic → Sediment	7.36%
Freshwater	Environmental → Aquatic → Freshwater	4.29%
Roots	Host-Associated → Plants → Roots	3.68%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.23%
Floodplain	Environmental → Terrestrial → Floodplain	0.61%
Unclassified	Environmental → Unclassified → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.36%
Loam	Environmental → Terrestrial → Soil → Loam	6.13%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	3.68%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.45%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.23%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.23%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.61%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.36%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.29%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	3.68%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.07%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.07%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.07%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.45%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.84%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.23%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.23%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.23%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.61%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.93%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.75%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.29%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	3.68%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.07%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.84%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.23%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.23%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.23%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.23%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.23%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.23%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.61%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.61%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.61%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.61%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908016	Sample 642	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006177	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031015	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A9_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034680	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OU_01519120	2124908016		MQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRAVQPEPKA
F62_09433000	2170459010	Grass Soil	MQASLTAIGRQLHDDYLPILAKPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSATAHPESKA
deepsgr_00756190	2199352025	Soil	MTRSMQASLTAIGRQLHDGYLPTLAQPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSATAHPESKA
INPhiseqgaiiFebDRAFT_1015970162	3300000364	Soil	MTRSMQASLTAIGRQLHDDYLPTLAKPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSVTAHPESKA*
JGI11643J11755_113889342	3300000787	Soil	MTRSMQASLTAIGRQLHDDYLPTLAKPLPSDLKDLVARLVALEINKXGXSXRAIAVLQSVTAHPESKA*
JGI1027J11758_124839592	3300000789	Soil	MTRSMQASLTAIGRQLHDDYLPTLAKPLPSDLKDLVARLVALEINKXGXSXRAXAVLQSXXAHPESKA*
JGI24738J21930_100365243	3300002075	Corn Rhizosphere	TRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKA*
C688J35102_1191633611	3300002568	Soil	MTRSMQASLTAIGRQLHDDYQPTLAKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARGAQPEPKA*
Ga0062593_1008143272	3300004114	Soil	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRAVQPEPKA*
Ga0063455_1009897361	3300004153	Soil	LCWFARLGVHGTGEHPKPHIRESAMTRSMQASLTAIGRRLHDDYQPTVAKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARAAKPEPKA*
Ga0063455_1010182632	3300004153	Soil	MQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRAVQPEPKA*
Ga0062589_1021528751	3300004156	Soil	MTRSMQASLTAIGRQLHDDYQPTLAKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARAAQPEPKA*
Ga0062595_1001662913	3300004479	Soil	MTRSMQASLTAIGRELQAGYVPSLATPLPAGVKDLVARLVALEINKRGTSKRAIAVLQSVPAPPAPKP*
Ga0062592_1004441962	3300004480	Soil	MQASLTAIGRELQAGYVPSLATPLPAGVKDLVARLVALEINKRGTSKRAIAVLQSVPAPPAPKP*
Ga0062594_1025137431	3300005093	Soil	MTRSMQASLAAIGRQLQDDYQPTLAKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARAAQPEPKA*
Ga0066815_100104602	3300005164	Soil	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAARPEPKA*
Ga0066810_100069861	3300005169	Soil	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPK
Ga0070676_102970451	3300005328	Miscanthus Rhizosphere	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKA*
Ga0068868_1000210221	3300005338	Miscanthus Rhizosphere	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQ
Ga0070660_1003606923	3300005339	Corn Rhizosphere	EHPEPHIRESAMTRSMQASLTAIGRQLHDDYQPTVEKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARAAQPEPKA*
Ga0070660_1009297911	3300005339	Corn Rhizosphere	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSPAVQPEPKA*
Ga0070668_1011117033	3300005347	Switchgrass Rhizosphere	WVSHGTGEHPEPHIRESAMTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKV*
Ga0070669_1000885171	3300005353	Switchgrass Rhizosphere	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAQPEPEA*
Ga0070675_1012539602	3300005354	Miscanthus Rhizosphere	GDYVAPCGWAARGTRERLKPDTRESAMTRSMQASLTAIGRELHAGYVPSLATPLPADLKDLVARLVALEINKRGTSKRAIAVVQSIPAPPAPKR*
Ga0070674_1008226251	3300005356	Miscanthus Rhizosphere	GWVSHGTGEHPEPHIRESAMTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRAVQPEPKA*
Ga0070674_1020723212	3300005356	Miscanthus Rhizosphere	MTRSMQASLTAIGRQLNEDYQPTLAKSLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKV*
Ga0070673_1013992851	3300005364	Switchgrass Rhizosphere	TRSMQASLTAIGRELQAGYVPSLATPLPAGVKDLVARLVALEINKRGTSKRAIAVLQSVPAPPAPKP*
Ga0070663_1004932701	3300005455	Corn Rhizosphere	MTRSMQASLTAIGRELHAGYVPSLATPLPADLKDLVARLVALEINKRGTSKRAIAVVQSVPAPPAPKP*
Ga0070663_1018274142	3300005455	Corn Rhizosphere	HEEHPEPHIRESAMTRSMQASLTAIGRQLHDDYQPTVEKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARAAQPEPKA*
Ga0070685_101981972	3300005466	Switchgrass Rhizosphere	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRTAQPEPKA*
Ga0068853_1002892513	3300005539	Corn Rhizosphere	MTRSMQASLTAIGRQLNEDYQPTLAKSLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKA*
Ga0070702_1002900082	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MTRSMQASLTAIGRELHAGYVPSLATPLPADLKDLVARLVALEINKRGTSKRAIAVLQSVPAPPAPKP*
Ga0068866_101046852	3300005718	Miscanthus Rhizosphere	MTRSMQASLTAIGRQLHDDYQPTLAKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARAA
Ga0068861_1003634493	3300005719	Switchgrass Rhizosphere	VSHGTGEHPEPHIRESAMTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKA*
Ga0068861_1005468091	3300005719	Switchgrass Rhizosphere	PGWVSHGTGEHPEPHIRESAMTRSMQASLTAIGRQLNEDYQPTLAKSLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKV*
Ga0068863_1022215382	3300005841	Switchgrass Rhizosphere	RESAMTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKA*
Ga0068858_1011579702	3300005842	Switchgrass Rhizosphere	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSR
Ga0068860_1000784991	3300005843	Switchgrass Rhizosphere	IGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKA*
Ga0068860_1018722672	3300005843	Switchgrass Rhizosphere	HGTGEHPEPHIRESAMTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKV*
Ga0070717_106542831	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	HLEPDTRGSAMTRSMQASLTAIGRELQAGYVPSLATPLPADLKGLVARLVALEINKRGTSKRAIAVLQSVPKPPAPKP*
Ga0070717_108908842	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAQPEPKA*
Ga0075365_100468603	3300006038	Populus Endosphere	MTGSMQASLTAIGRQLHDDYQPTLEKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARAAQPEPKA*
Ga0075365_108934582	3300006038	Populus Endosphere	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQS
Ga0075368_104592802	3300006042	Populus Endosphere	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRAAQPEPKA*
Ga0075362_104697492	3300006177	Populus Endosphere	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRAAQQEPKA*
Ga0075367_104484822	3300006178	Populus Endosphere	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTDLKDLVARLVALEINKRGSSRRAIAVLQSRAAQPEPKA*
Ga0074049_129917223	3300006580	Soil	VSHGTGEHPEPHIRESAMTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKV*
Ga0074048_133220302	3300006581	Soil	QASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKV*
Ga0075428_1004226663	3300006844	Populus Rhizosphere	PDTRESAMTRSMQASLTAIGRELQAGYVPSLATPLPAGVKDLVARLVALEINKRGTSKRAIAVLQSVPAPPAPKP*
Ga0075430_1003212912	3300006846	Populus Rhizosphere	MTRSMQASLTAIGRELQAGYVPSLATPLPAGVKDLVARLVALEINKRGTSKRAIAVLQS
Ga0075431_1008547642	3300006847	Populus Rhizosphere	MQASLTAIGSELQAGYVPSLATPLPAGVKDLVARLVALEINKRGTSKRAIAVLQSVPAPPAPKP*
Ga0075425_1008249883	3300006854	Populus Rhizosphere	SMQASLTAIGRELHAGYVPSLATPLPADLKDLVARLVALEINKRGTSKRAIAVLQSVPAPPAPKP*
Ga0075434_1022645301	3300006871	Populus Rhizosphere	PDTRESAMTRSMQASLTAIGRELHAGYVPSLATPLPADLKDLVARLVALEINKRGTSKRAIAVVQSVPAPPAPKP*
Ga0075424_1001183591	3300006904	Populus Rhizosphere	MREHLEPDTRESAMTRSMQASLTAIGRELHAGYVPSLATPLPAGVKDLVARLVALEINKRGTSKRAIAVLQSVPAPPAPKP*
Ga0105250_100484822	3300009092	Switchgrass Rhizosphere	MQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKA*
Ga0075418_103971192	3300009100	Populus Rhizosphere	MQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRTAPPEPKA*
Ga0099792_101863612	3300009143	Vadose Zone Soil	MQASLTAIGRQLHDDYLPTLAQPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSATAHPESKA*
Ga0105243_129920361	3300009148	Miscanthus Rhizosphere	ARGTRERLKPDTRESAMTRSMQASLTAIGRELHAGYVPSLATPLPADLKDLVARLVALEINKRGTSKRAIAVVQSIPAPPAPKR*
Ga0105243_130686611	3300009148	Miscanthus Rhizosphere	MQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRTAQPEPKA*
Ga0111538_139119332	3300009156	Populus Rhizosphere	RQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKA*
Ga0111538_140270501	3300009156	Populus Rhizosphere	RQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRAVQPEPKA*
Ga0075423_104783273	3300009162	Populus Rhizosphere	MQASLTAIGRQLHDDYQPTLAKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARAAQPEPKA*
Ga0105248_115266323	3300009177	Switchgrass Rhizosphere	MQASLAAIGRQLQDDYQPTLAKPLPTELKDLVARLIALEINKRGSSRRAIAVLQARAAPPEPKA*
Ga0105237_104592551	3300009545	Corn Rhizosphere	MQASLTAIGRELHAGYVPSLATPLPSDLKDLVARLVALEINKRGASKRAIAVVQSVPAPPAPKR*
Ga0105249_102038483	3300009553	Switchgrass Rhizosphere	MQASLTAIGRELQAGYVPSLATPLPADLKDLVARLVALEINKRGTSKRAIAVVQSVPAPPAAKP*
Ga0105249_104572921	3300009553	Switchgrass Rhizosphere	MQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQ
Ga0126310_105273741	3300010044	Serpentine Soil	MQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRAAQPEPKA*
Ga0127503_101333011	3300010154	Soil	PPGTAIRESAMTRSIQASLTAIGRQLHDDYLPTLAQPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSATAHPESKA*
Ga0134124_116704591	3300010397	Terrestrial Soil	MQASLTAIGRHLHDDYEPTLAKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARAAQPEPKA*
Ga0134122_113333361	3300010400	Terrestrial Soil	MQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAVPPEPKA*
Ga0134123_121516461	3300010403	Terrestrial Soil	MQASLTAIGRELHAGYVPSLATPLPAGVKDLVARLVALEINKRGTSKRAIAVLQSVPAPPAPKP*
Ga0138513_1000451861	3300011000	Soil	MQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQTRAAQPEPKA*
Ga0126317_104491722	3300011332	Soil	MQASLTAIGRQLHEDYQPTLAKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARAAQPESKT*
Ga0150985_1121475722	3300012212	Avena Fatua Rhizosphere	MQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKV*
Ga0150985_1171163593	3300012212	Avena Fatua Rhizosphere	MQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARRVALEINKRGSSRRAIAVLQARAAQPEPKA*
Ga0157302_100176202	3300012915	Soil	MQASLAAIGRQLHDDYQPTLAKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARAAQPEPKA*
Ga0137413_105444582	3300012924	Vadose Zone Soil	MQASLTAIGRQLHDDYLPTLAKPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSATAHPESKA*
Ga0162650_1000425922	3300012939	Soil	MQASLTAIGRQLSEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRTAPPEPKA*
Ga0164300_100197023	3300012951	Soil	MQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSKRRAIAVLQARAAPPEPKA*
Ga0164300_101959792	3300012951	Soil	MQASLTAIGRQLHDDYQPTVEKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARAAQPEPKA*
Ga0164300_102819691	3300012951	Soil	MQASLTAIGRELQAGYVPSLATPLPADLKGLVARLVALEINKRGTSKRAIAVLQSVPKPPAPKP*
Ga0164300_105347822	3300012951	Soil	MQASLTAIGRQLHDGYLPTLAQPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSAAAHPESKA*
Ga0164299_104878222	3300012958	Soil	VQAPLTAIGRQLHDDYQPTVEKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARAAQPEPKA*
Ga0164302_112243481	3300012961	Soil	MQASLTAIGRQLHDDYLPTLAQPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSAAAHPESKA*
Ga0164308_104984042	3300012985	Soil	MQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAARPEPKA*
Ga0164304_117102331	3300012986	Soil	MQASLTAIGRQLHDDYQPTVEKPLPTELKDLVARLIALEINKRGTSRRAIAVLQA
Ga0164306_100667822	3300012988	Soil	MQASLTAIGRELHAGYVPSLATPLPADLKGLVARLVALEINKRGTSKRAIAVLQSVPKPPAPKP*
Ga0164305_121665751	3300012989	Soil	MQASLTAIGRELQAGYVPSLATPLPADLKGLVARLVALEINQRGTSKRAIAVLQSVPKPPAPKP*
Ga0163162_116237661	3300013306	Switchgrass Rhizosphere	GRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRAVQPEPKA*
Ga0163162_132942931	3300013306	Switchgrass Rhizosphere	GRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRTAQPEPKA*
Ga0157380_112906532	3300014326	Switchgrass Rhizosphere	MQASLTAIGRELQAGYVPSLATPLPADLKGLVARLVALEINKRGTSKRAIAVLDIF*
Ga0173480_110857161	3300015200	Soil	MQASLTAIGRELQAGYVPSLATPLPADLKDLVARLVALEINKRGTSKRAIAVLQSVPAPPAPKP*
Ga0132257_1011402102	3300015373	Arabidopsis Rhizosphere	MQASLTAIGRELQAGYVPSVATPLPADLKDLVARLVALEINKRGTSKRAIAVVQSVPAPPAPKR*
Ga0132255_1004935772	3300015374	Arabidopsis Rhizosphere	MQASLTAIGRELHAGYVPSLATPLPADLKDLVARLVALEINKRGTSKRAIAVVQSVPAPPAPKR*
Ga0163161_103207623	3300017792	Switchgrass Rhizosphere	MTRSMQASLTAIGRELHAGYVPSLATPLPADLKDLVARLVALEINKRGTSKRAIAVLQSVPAPPAPKP
Ga0184604_100419653	3300018000	Groundwater Sediment	MTRSMQASLTAIGRQLHDDYLPTLAQPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSATAHPESKA
Ga0184608_100061775	3300018028	Groundwater Sediment	MTRSMQASLTAIGRQLHDDYLPTLAQPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSAAAHPESKA
Ga0184634_100050243	3300018031	Groundwater Sediment	MTRSMQASLTAIGRQLHDDYLPTLAKPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSAAAHPESKA
Ga0184634_105009481	3300018031	Groundwater Sediment	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQAR
Ga0184616_103503541	3300018055	Groundwater Sediment	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKV
Ga0184617_10249183	3300018066	Groundwater Sediment	MTRSMQASLTAIGRQLHDDYLPTLAQPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSAIAHPESKA
Ga0184611_10528492	3300018067	Groundwater Sediment	MTRSMQASLTAIGRQLHDDYQPTLAKPLPTELKDLVARLIALEINKRGSSRRAIAVLQARAAPPEPKV
Ga0184625_100842172	3300018081	Groundwater Sediment	MTRSMQASLTAIGRQLHDDYLPTLAKPLPSDLKDLVARLVALEINKRGSSKQAIAVLQSAAAHPESKA
Ga0184625_103717842	3300018081	Groundwater Sediment	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARGAQPEPKA
Ga0184639_100416171	3300018082	Groundwater Sediment	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGTSRRAIAVLQARGAQPEPKA
Ga0184628_101408732	3300018083	Groundwater Sediment	MTRSMQASLTAIGRQLHDEYLPTLAKPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSAAAHPESKA
Ga0190268_104857302	3300018466	Soil	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSPAVQPEPKA
Ga0190270_134642901	3300018469	Soil	MTRSMQASLTAIGRQLHDDYQPTLTKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARVAQPEPKA
Ga0184645_12200101	3300019233	Groundwater Sediment	PPGTAIRESAMTRSMQASLTAIGRQLHDGYLPTLAQPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSATAHPESKA
Ga0184643_13537113	3300019255	Groundwater Sediment	MTRSMQASLTAIGRQLHDGYLPTLAQPLPSDLKHLVARLVALEINKRGSSKRAIAVLQSATAHPESKA
Ga0173481_100391302	3300019356	Soil	MTRSMQASLTAIGRELQAGYVPSLATPLPAGVKDLVARLVALEINKRGTSKRAIAVLQSVPAPPAPKP
Ga0173481_104516091	3300019356	Soil	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKA
Ga0173482_107274561	3300019361	Soil	SMQASLTAIGRELHAGYVPSLATPLPSDLKDLVARLVALEINKRGASKRAIAVLQSVPAPPAPKP
Ga0210381_100444222	3300021078	Groundwater Sediment	MTRSMQASLTAIGRQLHDGYLPTLAQPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSATAHPESEA
Ga0210382_102354802	3300021080	Groundwater Sediment	MTRSMQASLTAIGRQLHDGYLPTLAQPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSAIAHPESKA
Ga0222624_14359931	3300021951	Groundwater Sediment	SGWVSHGTGEHPEPHGRESAMTRSMQASLTAIGRQLHDDYQPTLAKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARGAQPEPKA
Ga0222622_111538791	3300022756	Groundwater Sediment	MTRSMQASLTAIGRQLHDDYQPTLAKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARGAQPEPKA
Ga0207685_103435521	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	GWVSHDTGEHPEPRIRESAMTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRAVQPEPKA
Ga0207657_100345965	3300025919	Corn Rhizosphere	MTRSMQASLTAIGRQLHDDYQPTVEKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARAAQPEPKA
Ga0207644_102598541	3300025931	Switchgrass Rhizosphere	RSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKA
Ga0207640_106640133	3300025981	Corn Rhizosphere	IGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKA
Ga0207677_113393563	3300026023	Miscanthus Rhizosphere	TAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKA
Ga0207678_105848792	3300026067	Corn Rhizosphere	MTRSMQASLAAIGRQLQDDYQPTLAKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARAAQPEPKA
Ga0207678_116400451	3300026067	Corn Rhizosphere	ESAMTRSMQASLTAIGRQLHDDYQPTVEKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARAAQPEPKA
Ga0207676_113321811	3300026095	Switchgrass Rhizosphere	GRVTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRTAQPEPKA
Ga0179593_12610712	3300026555	Vadose Zone Soil	MTRSMQASLTAIGRQLHDEYLPTLAKPLPSDLKDLVARLVALEINKRGSSKRAIAVLPSATAHPESKA
Ga0208983_10889212	3300027381	Forest Soil	HGEETPPGTAIRESAMTRSMQASLTAIGRQLHDEYLPTLAKPLPSDLKDLVARLVALEINKRGSSKRAIAVLPSATAHPESKA
Ga0208637_10220482	3300027401	Soil	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAARPEPKA
Ga0208890_10651371	3300027523	Soil	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRTAQP
Ga0209106_11185493	3300027616	Forest Soil	RVSHGMRDHLEPHIRESAMTRSMQASLTAIGRQLHDEYLPTLAKPLPSDLKDLVARLVALEINKRGSSKRAIAVLPSATAHPESKA
Ga0209813_102962752	3300027866	Populus Endosphere	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRAAQPEPKA
Ga0307291_10823882	3300028707	Soil	MTRSMQASLTAIGRQLHDDYLPTLAQPLPGDLKDLVARLVALEINKRGSSKQAIAVLQSAAAHPESKA
Ga0307322_100215873	3300028710	Soil	MTRSMQASLTAIGRQLSEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRAAQPEPKA
Ga0307285_101013411	3300028712	Soil	MQASLTAIGRQLNEDYLPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRAAQPEPKA
Ga0307315_100704692	3300028721	Soil	MTRSMQASLTAIGRQLHDEYLPTLAQPLPGDLKDLVARLVALEINKRGSSKQAIAVLQSAAAHPESKA
Ga0307297_100898082	3300028754	Soil	MTRSMQASLTAIGRQLHDDYLPTLAQPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSAVA
Ga0307316_101553791	3300028755	Soil	SHGTGEHPEPHRRESAMTRSMQASLTAIGRQLHDDYQPTLAKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARGAQPEPKA
Ga0307316_101585213	3300028755	Soil	TAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRAAQPEPKA
Ga0307320_104647882	3300028771	Soil	MTRSMQASLTAIGRQLHDDYQPTLAKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARAAQPEPKA
Ga0307282_105091442	3300028784	Soil	RQVCHGEETPPGTAIRESAMTRSMQASLTAIGRQLHDGYLPTLAQPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSATAHPESKA
Ga0307283_101556491	3300028790	Soil	MTRSMQASLTAIGRQLHDDYQPTLAKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARGAQP
Ga0307299_100601332	3300028793	Soil	MTRSMQASLTAIGRQLHDGYLPTLAQPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSA
Ga0307299_101173821	3300028793	Soil	IGRQLHDDYLPTLAQPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSATAHPESKA
Ga0307287_103547752	3300028796	Soil	SYPGWVSHGTGEHPEPHIRESAMTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKV
Ga0307305_100353692	3300028807	Soil	MTRSMQASLTAIGRQLHENYLPTLAQPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSATAHPESKA
Ga0247825_112804831	3300028812	Soil	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSPAVQP
Ga0307314_100193712	3300028872	Soil	MTRSMQASLTAIGRQLHDEYLPTLAQPLPGDLKDLVARLVALEINKRGSSKRAIAVLQSATAHPESKA
Ga0307314_102586901	3300028872	Soil	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSRTAPPEPKA
Ga0307308_102870692	3300028884	Soil	MTRSMQASLTAIGRQLHDDYLPTLAQPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSAIAH
Ga0247827_113060051	3300028889	Soil	MTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAEPPEPKA
Ga0138298_16287291	3300031015	Soil	PPGTAIRESAMTRSMQASLTAIGRQLHDDYLPILAKPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSATAQPESKA
Ga0307497_102161161	3300031226	Soil	MTRSMQASLTAIGRQLHDGYLPILAKPLPSDLKDLVARLVALEINKRGSSKRAIAVLHSATAHPESKA
Ga0170824_1234599531	3300031231	Forest Soil	MTRSMQASLTAIGRQLHDGYLPILAKPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSATAHPESKA
Ga0310906_114259942	3300032013	Soil	MREHLEPDTRESAMTRSMQASLTAIGRELQAGYVPSLATPLPADLKDLVARLVALEINKRGTSKRAIAVLQSVPAQPAPKP
Ga0310810_100566552	3300033412	Soil	MTRSMQASLTAIGRELQAGYVPSLATPLPADLKDLVARLVALEINKRGTSKRAIAVLQSVPAPPAPKP
Ga0247829_103996493	3300033550	Soil	GWVSHGTGEHPEPHIRESAMTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKA
Ga0247829_113591691	3300033550	Soil	AMTRSMQASLTAIGRELHAGYVPSLATPLPADLKDLVARLVALEINKRGTSKRAIAVLQSVPAPPAPKP
Ga0247830_106097331	3300033551	Soil	VCWYAGWVSHGTREHPEPHIRESAMTRSMQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQSPAVQPEPKA
Ga0247830_108432371	3300033551	Soil	MTRSMQASLTAIGRQLHDDYQPTLAKPLPTELKDLVARLIALEINKRGTSRRAIAVLQARGAQPEPK
Ga0364925_0186202_237_431	3300034147	Sediment	MQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLVALEINKRGSSRRAIAVLQARAAPPEPKV
Ga0370541_005674_59_253	3300034680	Soil	MQASLTAIGRQLHDDYLPTLAQPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSAIAHPESKA
Ga0370546_011060_55_249	3300034681	Soil	MQASLTAIGRQLHDGYLPTLAQPLPSDLKDLVARLVALEINKRGSSKRAIAVLQSAIAHPESKA
Ga0370546_028797_60_254	3300034681	Soil	MQASLTAIGRQLNEDYQPTLAKPLPTELKDLVARLIALEINKRGSSRRAIAVLQARAAQPKPKA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F039710

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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