NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F038737

Metagenome Family F038737

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F038737
Family Type Metagenome
Number of Sequences 165
Average Sequence Length 46 residues
Representative Sequence IEEPVLKSIVDKIRQESGISAEIPLDRLVDLTLLREVKAELRKK
Number of Associated Samples 149
Number of Associated Scaffolds 165

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 5.45 %
% of genes near scaffold ends (potentially truncated) 92.12 %
% of genes from short scaffolds (< 2000 bps) 91.52 %
Associated GOLD sequencing projects 138
AlphaFold2 3D model prediction Yes
3D model pTM-score0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (96.364 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(8.485 % of family members)
Environment Ontology (ENVO) Unclassified
(32.727 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(47.273 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 41.67%    β-sheet: 0.00%    Coil/Unstructured: 58.33%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 165 Family Scaffolds
PF13414TPR_11 45.45
PF14559TPR_19 12.12
PF13432TPR_16 11.52
PF00515TPR_1 4.24
PF12895ANAPC3 3.03
PF01977UbiD 1.82
PF09084NMT1 1.21
PF00753Lactamase_B 1.21
PF00248Aldo_ket_red 0.61
PF04365BrnT_toxin 0.61
PF14294DUF4372 0.61
PF04909Amidohydro_2 0.61
PF00581Rhodanese 0.61
PF13431TPR_17 0.61
PF07719TPR_2 0.61

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 165 Family Scaffolds
COG00433-polyprenyl-4-hydroxybenzoate decarboxylaseCoenzyme transport and metabolism [H] 1.82
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.21
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.21
COG2929Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin systemDefense mechanisms [V] 0.61

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.36 %
UnclassifiedrootN/A3.64 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000837|AP72_2010_repI_A100DRAFT_1018936All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300002124|C687J26631_10050190All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1457Open in IMG/M
3300003999|Ga0055469_10191357All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium636Open in IMG/M
3300004114|Ga0062593_102380167All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300004463|Ga0063356_103386066All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300004463|Ga0063356_104774174All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300004480|Ga0062592_102040239All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300005093|Ga0062594_100458457All Organisms → cellular organisms → Bacteria1058Open in IMG/M
3300005167|Ga0066672_10890355All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300005205|Ga0068999_10127795All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300005295|Ga0065707_10424796All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300005331|Ga0070670_101370366All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300005332|Ga0066388_103284545All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300005339|Ga0070660_100782437All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300005343|Ga0070687_100624891All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300005444|Ga0070694_101235002All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300005446|Ga0066686_10334789All Organisms → cellular organisms → Bacteria1031Open in IMG/M
3300005450|Ga0066682_10541466All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300005459|Ga0068867_100961588All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300005459|Ga0068867_101122280All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300005467|Ga0070706_101432527All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300005467|Ga0070706_102068665All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300005468|Ga0070707_100972805All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300005545|Ga0070695_100700104All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300005545|Ga0070695_101311299All Organisms → cellular organisms → Bacteria598Open in IMG/M
3300005552|Ga0066701_10042078All Organisms → cellular organisms → Bacteria → Proteobacteria2458Open in IMG/M
3300005559|Ga0066700_10880390All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300005615|Ga0070702_101525733All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300005617|Ga0068859_100412821All Organisms → cellular organisms → Bacteria1446Open in IMG/M
3300005764|Ga0066903_104998673All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300005840|Ga0068870_10988831All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300005841|Ga0068863_101842140All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300005844|Ga0068862_102607879All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300005937|Ga0081455_10531676All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300006196|Ga0075422_10418548All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300006796|Ga0066665_10538775All Organisms → cellular organisms → Bacteria951Open in IMG/M
3300006804|Ga0079221_10101695All Organisms → cellular organisms → Bacteria1414Open in IMG/M
3300006806|Ga0079220_11647708All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300006845|Ga0075421_100818598All Organisms → cellular organisms → Bacteria → Proteobacteria1070Open in IMG/M
3300006846|Ga0075430_100525201All Organisms → cellular organisms → Bacteria976Open in IMG/M
3300006852|Ga0075433_10834756All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300006854|Ga0075425_101499982Not Available761Open in IMG/M
3300006876|Ga0079217_10043060All Organisms → cellular organisms → Bacteria1769Open in IMG/M
3300006904|Ga0075424_102024856All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300006914|Ga0075436_100070253All Organisms → cellular organisms → Bacteria2421Open in IMG/M
3300006954|Ga0079219_10900824All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300006969|Ga0075419_10321848All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1046Open in IMG/M
3300007004|Ga0079218_12333694All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300009012|Ga0066710_100460317All Organisms → cellular organisms → Bacteria → Proteobacteria1909Open in IMG/M
3300009081|Ga0105098_10349369All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300009087|Ga0105107_10310545All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1098Open in IMG/M
3300009088|Ga0099830_10005739All Organisms → cellular organisms → Bacteria7172Open in IMG/M
3300009098|Ga0105245_12861426All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300009100|Ga0075418_10811441All Organisms → cellular organisms → Bacteria1010Open in IMG/M
3300009137|Ga0066709_103938660All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300009147|Ga0114129_12274024All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300009156|Ga0111538_11390155All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300009157|Ga0105092_10213885All Organisms → cellular organisms → Bacteria1079Open in IMG/M
3300009157|Ga0105092_10716298All Organisms → cellular organisms → Bacteria → Proteobacteria583Open in IMG/M
3300009157|Ga0105092_10976370All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300009162|Ga0075423_10835926All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium975Open in IMG/M
3300009162|Ga0075423_11528123All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300009553|Ga0105249_10037580All Organisms → cellular organisms → Bacteria4394Open in IMG/M
3300009553|Ga0105249_13126628All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300010029|Ga0105074_1065878All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300010036|Ga0126305_10457196All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300010037|Ga0126304_10899898All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300010043|Ga0126380_11791670All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300010043|Ga0126380_11932338All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Oleomonas → Oleomonas cavernae538Open in IMG/M
3300010046|Ga0126384_11305274All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300010048|Ga0126373_10017491All Organisms → cellular organisms → Bacteria5984Open in IMG/M
3300010373|Ga0134128_10367773All Organisms → cellular organisms → Bacteria → Proteobacteria1606Open in IMG/M
3300010400|Ga0134122_10573214All Organisms → cellular organisms → Bacteria1037Open in IMG/M
3300011271|Ga0137393_11710461All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300011429|Ga0137455_1246924Not Available527Open in IMG/M
3300012039|Ga0137421_1125117All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300012041|Ga0137430_1130895All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300012173|Ga0137327_1081969All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300012208|Ga0137376_10539275All Organisms → cellular organisms → Bacteria1011Open in IMG/M
3300012211|Ga0137377_11078017All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300012226|Ga0137447_1110093All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300012355|Ga0137369_10286468All Organisms → cellular organisms → Bacteria1229Open in IMG/M
3300012477|Ga0157336_1001522All Organisms → cellular organisms → Bacteria → Proteobacteria1213Open in IMG/M
3300012483|Ga0157337_1000945All Organisms → cellular organisms → Bacteria → Proteobacteria1398Open in IMG/M
3300012511|Ga0157332_1005502All Organisms → cellular organisms → Bacteria1100Open in IMG/M
3300012515|Ga0157338_1072102All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300012925|Ga0137419_11097439All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300012929|Ga0137404_10009623All Organisms → cellular organisms → Bacteria6653Open in IMG/M
3300012944|Ga0137410_11957344All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300012971|Ga0126369_11825787All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium696Open in IMG/M
3300013307|Ga0157372_10263594All Organisms → cellular organisms → Bacteria → Proteobacteria2001Open in IMG/M
3300014271|Ga0075326_1119857All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300014296|Ga0075344_1047090All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300014866|Ga0180090_1095466All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300014878|Ga0180065_1052218All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300014969|Ga0157376_12724456All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300015077|Ga0173483_10192814All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300015245|Ga0137409_11239422All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300015253|Ga0180081_1078043All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300015371|Ga0132258_11838489All Organisms → cellular organisms → Bacteria1526Open in IMG/M
3300015372|Ga0132256_100472823All Organisms → cellular organisms → Bacteria → Proteobacteria1362Open in IMG/M
3300015372|Ga0132256_101091942All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300015372|Ga0132256_101981517All Organisms → cellular organisms → Bacteria689Open in IMG/M
3300015373|Ga0132257_101436391All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300018029|Ga0187787_10047505All Organisms → cellular organisms → Bacteria1256Open in IMG/M
3300018031|Ga0184634_10093420All Organisms → cellular organisms → Bacteria1306Open in IMG/M
3300018063|Ga0184637_10206186Not Available1205Open in IMG/M
3300018074|Ga0184640_10003666All Organisms → cellular organisms → Bacteria → Proteobacteria4972Open in IMG/M
3300018075|Ga0184632_10017342All Organisms → cellular organisms → Bacteria3030Open in IMG/M
3300018076|Ga0184609_10059244All Organisms → cellular organisms → Bacteria1652Open in IMG/M
3300018077|Ga0184633_10412963All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300018082|Ga0184639_10063055All Organisms → cellular organisms → Bacteria1930Open in IMG/M
3300018422|Ga0190265_12488770All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300018422|Ga0190265_12671048All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300018466|Ga0190268_11769725Not Available555Open in IMG/M
3300018469|Ga0190270_11845042All Organisms → cellular organisms → Bacteria661Open in IMG/M
3300018481|Ga0190271_11183472All Organisms → cellular organisms → Bacteria887Open in IMG/M
3300018481|Ga0190271_12080395All Organisms → cellular organisms → Bacteria676Open in IMG/M
3300021073|Ga0210378_10257641All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300021073|Ga0210378_10409413All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300025155|Ga0209320_10195021All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium882Open in IMG/M
3300025537|Ga0210061_1009543All Organisms → cellular organisms → Bacteria1543Open in IMG/M
3300025567|Ga0210076_1002616All Organisms → cellular organisms → Bacteria → Proteobacteria4377Open in IMG/M
3300025910|Ga0207684_11419466All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300025910|Ga0207684_11634912All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300025917|Ga0207660_10059082All Organisms → cellular organisms → Bacteria2751Open in IMG/M
3300025930|Ga0207701_10011949All Organisms → cellular organisms → Bacteria8502Open in IMG/M
3300025931|Ga0207644_10466534All Organisms → cellular organisms → Bacteria1038Open in IMG/M
3300025932|Ga0207690_10503993All Organisms → cellular organisms → Bacteria979Open in IMG/M
3300025961|Ga0207712_10917181All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300025972|Ga0207668_10474448All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1072Open in IMG/M
3300026035|Ga0207703_11425749All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300026075|Ga0207708_11333955All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300026089|Ga0207648_12284386All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300026111|Ga0208291_1003042All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2843Open in IMG/M
3300026121|Ga0207683_11929325All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300027682|Ga0209971_1035844All Organisms → cellular organisms → Bacteria1193Open in IMG/M
3300027722|Ga0209819_10195981All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300027722|Ga0209819_10239924Not Available629Open in IMG/M
3300027725|Ga0209178_1252485All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300027862|Ga0209701_10055300All Organisms → cellular organisms → Bacteria2536Open in IMG/M
3300027880|Ga0209481_10480504All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300027886|Ga0209486_10635970All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300028380|Ga0268265_11613668All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300028578|Ga0272482_10128699All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300030620|Ga0302046_10910468All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium703Open in IMG/M
3300031184|Ga0307499_10171478All Organisms → cellular organisms → Bacteria650Open in IMG/M
(restricted) 3300031237|Ga0255334_1031042All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300031538|Ga0310888_10143208All Organisms → cellular organisms → Bacteria → Proteobacteria1267Open in IMG/M
3300031744|Ga0306918_10138656All Organisms → cellular organisms → Bacteria → Proteobacteria1784Open in IMG/M
3300031771|Ga0318546_10800373All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300031820|Ga0307473_10797327All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300031833|Ga0310917_10517094All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300031901|Ga0307406_10190790All Organisms → cellular organisms → Bacteria1500Open in IMG/M
3300031908|Ga0310900_11032320All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300031910|Ga0306923_12240520All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300031941|Ga0310912_10925679All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300032002|Ga0307416_103708111All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300032122|Ga0310895_10118324All Organisms → cellular organisms → Bacteria1104Open in IMG/M
3300032157|Ga0315912_10575623All Organisms → cellular organisms → Bacteria897Open in IMG/M
3300032421|Ga0310812_10423169All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300032770|Ga0335085_11033883All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300032828|Ga0335080_12101867Not Available545Open in IMG/M
3300033481|Ga0316600_11241775All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300034177|Ga0364932_0150361All Organisms → cellular organisms → Bacteria886Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere8.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.27%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.06%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.06%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil4.85%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment4.24%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.24%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil4.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.64%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.03%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.03%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.42%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.82%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.82%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.82%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.82%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere1.82%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.82%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.82%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.82%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.21%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.21%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.21%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.21%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.21%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.21%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.21%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.61%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.61%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.61%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.61%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.61%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.61%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.61%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.61%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.61%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.61%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.61%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.61%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.61%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.61%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000837Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100EnvironmentalOpen in IMG/M
3300002124Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3EnvironmentalOpen in IMG/M
3300003999Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005205Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010029Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20EnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300011429Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2EnvironmentalOpen in IMG/M
3300012039Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2EnvironmentalOpen in IMG/M
3300012041Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2EnvironmentalOpen in IMG/M
3300012173Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2EnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012226Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2EnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012477Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610Host-AssociatedOpen in IMG/M
3300012483Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.yng.040610Host-AssociatedOpen in IMG/M
3300012511Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10EnvironmentalOpen in IMG/M
3300012515Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610Host-AssociatedOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014271Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2EnvironmentalOpen in IMG/M
3300014296Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300014866Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT890_16_10DEnvironmentalOpen in IMG/M
3300014878Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200A_16_10DEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015253Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT590_16_10DEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018029Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MGEnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018075Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300025155Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4EnvironmentalOpen in IMG/M
3300025537Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025567Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026035Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026111Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027682Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027722Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028578Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0EnvironmentalOpen in IMG/M
3300030620Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031237 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_35cm_T3_129EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033481Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CTEnvironmentalOpen in IMG/M
3300034177Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
AP72_2010_repI_A100DRAFT_101893613300000837Forest SoilFKSIIDKIRQESGITAEIPADRLVDLSPLREVRKR*
C687J26631_1005019013300002124SoilVLKSIVDKIRQESGITTEIPLDRLVDPSVLREARAELRKR*
Ga0055469_1019135723300003999Natural And Restored WetlandsILKAIVDKIRQESGITAEVPLDRVVDLALLREVQKELLKK*
Ga0062593_10238016723300004114SoilATLKGIIDKIRQESGLAAEIPSDRLVDLTLLRDVKAELRKK*
Ga0063356_10338606613300004463Arabidopsis Thaliana RhizosphereKQVVNTDGDIEEPVLKSIVEKIRQETGFAAEVPLDRLVDLSILRELRAELRQR*
Ga0063356_10477417423300004463Arabidopsis Thaliana RhizosphereIKQVLNADGDIEEPVLKSILDKVRQESGIAAEIPVDRLVDLSMLREARAELRKR*
Ga0062592_10204023923300004480SoilDTLKILRQVVNTDGDIEEAVLKSIVDKVRQESGYAAEISLDRLVDLTVLREVQKELRKK*
Ga0062594_10045845733300005093SoilLKSILNKIRQESGIAAEIPVDRLVDLSMLREARADLRKK*
Ga0066672_1089035523300005167SoilYKILKQIVNSDGDIEEPVLRSIVDKLRQESAVTSEIPLDRLVDLSILREVKGELRKR*
Ga0068999_1012779513300005205Natural And Restored WetlandsLIAPVLRQIVNVDGDIEEPVLQSIIDKIRQESGVAAEIPLDRLVDLSLLREVKAE
Ga0065707_1042479623300005295Switchgrass RhizosphereVLRAILDKLKQESGIAGEVPVDRLVDLSLLREVRVELRKR*
Ga0070670_10137036623300005331Switchgrass RhizosphereDGDIDDATLKGIIDKIRQESGLGAEIPADRLVDLSLLREVKGELRKK*
Ga0066388_10328454533300005332Tropical Forest SoilVVNSDGDIEDPVLKSIIDKIRQESGIIAEIPADRLIDLSPLREVRKR*
Ga0070660_10078243713300005339Corn RhizosphereKQIVNTDGDIEEPVLKTILEKIKQESGVTAEVPLDRLVDLSLLREVKTELGKK*
Ga0070687_10062489113300005343Switchgrass RhizosphereKQIVNTDGDIEEPVLKTILEKLKQESGVIAEVPLDRLVDLSLLREVKAEVGKK*
Ga0070694_10123500223300005444Corn, Switchgrass And Miscanthus RhizosphereDTYRILKQIVNTDGDIEEPVLKTILEKIKQESGVTAEVPLDRLVDLSLLREVKTELGKK*
Ga0066686_1033478933300005446SoilAVLKSIIDKIRQESGISAEVPADRLVDLSILREVRAELRKR*
Ga0066682_1054146613300005450SoilQIVNSDGDIEDAVLKSILDKIKQESGIAGEVPADRLVDLSLLREVRAELRKR*
Ga0068867_10096158823300005459Miscanthus RhizosphereTDGDIEEPVLKSIVDKIRQESGFAGAIALDRLFDLSVLREVKSELRKK*
Ga0068867_10112228013300005459Miscanthus RhizosphereLKTILEKLKQESGVIAEVPLDRLVDLSLLREVKAEVGKK*
Ga0070706_10143252723300005467Corn, Switchgrass And Miscanthus RhizosphereLRQIVNSDGDVEEAVLRSIIEKIRQESSMTTEIPMDRLVDLSILREVKAELKRR*
Ga0070706_10206866523300005467Corn, Switchgrass And Miscanthus RhizosphereVLKSILDKIKQESGITGEVPADRLVDLSLLREVHAEMRKR*
Ga0070707_10097280523300005468Corn, Switchgrass And Miscanthus RhizosphereFKSIIDKIRQESGVSAEVPAERLVDLSILREVGTESKKR*
Ga0070695_10070010423300005545Corn, Switchgrass And Miscanthus RhizosphereGDIEEPVLRAILDKLKQESGIAGEITVDRLVDLSLLREVRVELRKR*
Ga0070695_10131129923300005545Corn, Switchgrass And Miscanthus RhizosphereDIEEPVLKSIVEKLKQESGITAEIPLDRLVDLSILREVKGKK*
Ga0066701_1004207863300005552SoilPVFKSIVDKIRQESGIATEIPADRLIDQSILRESKGELGKG*
Ga0066700_1088039013300005559SoilKQVVNSDGDIEEPVFKSIIDKIRQESGVSAEVPAERLIDLSILRELGTESKKR*
Ga0070702_10152573313300005615Corn, Switchgrass And Miscanthus RhizosphereLKSILEKIRQESGFSAEIPVDRVVDLSLLRQVKADLRKK*
Ga0068859_10041282113300005617Switchgrass RhizosphereKTILEKIKQESGVTAEVPLDRLVDLSLLREVKTELGKK*
Ga0066903_10499867323300005764Tropical Forest SoilVLKSIIDKVTQESGIGVEIPMNRLPDLTILREVKAELKKK*
Ga0068870_1098883123300005840Miscanthus RhizosphereILEKLKQEAGVIAEVPLDRLVDLSLLREVKAEVGKK*
Ga0068863_10184214023300005841Switchgrass RhizosphereDGDIEEPVLKTILEKLKQEAGVIAEVPLDRLVDLSLLREVKAEVGKK*
Ga0068862_10260787913300005844Switchgrass RhizosphereVNTDGDIEEPVLKTILEKLKQESGVIAEVPLDRLVDLSLLREVKAEVGKK*
Ga0081455_1053167623300005937Tabebuia Heterophylla RhizosphereKSIIDKIRQESGITAEMPADRLVDLSPLREVRKR*
Ga0075422_1041854813300006196Populus RhizospherePVLKTILEKLKQESGVTAEVPLDRLVDLSLLRDVKAEVGKK*
Ga0066665_1053877533300006796SoilILKQIVNSDGDIEEPVLRSIVDKLRQESAVTSEIPLDRLVDLSILREVKGELRKR*
Ga0079221_1010169533300006804Agricultural SoilVLKTILEKIKQESGVTAEVPLDRLVDLSLLREVKGELGKK*
Ga0079220_1164770813300006806Agricultural SoilTDGDIEEPVLKTILEKIKQESGVTAEVPLDRLVDLSLLREVKTELGKK*
Ga0075421_10081859833300006845Populus RhizosphereADSYRQIKQVLNADGDIEEPVLKSILNKIRQESGIAAEISTDRLVDLSMLREARADLRKK
Ga0075430_10052520113300006846Populus RhizosphereQIKQVLNADGDIEEPVLKSILNKIRQESGIAAEIPMDRLVDLSMLREARADLRKK*
Ga0075433_1083475613300006852Populus RhizosphereLEKLKQESGVTAEVPLDRLVDLSLLRDVKAEVGKK*
Ga0075425_10149998223300006854Populus RhizosphereYEKIKQESGITGEIPLDRLVDLSLLREAKTELYK*
Ga0079217_1004306013300006876Agricultural SoilPILKSILNKIRQEAGIAAEVPVDRLVDLSILREARAELRKR*
Ga0075424_10202485623300006904Populus RhizosphereRQIVNSDGDIEDGVLKSILDKIKQESGITGEVPADRLVDLSLLREVHAEMRKR*
Ga0075436_10007025313300006914Populus RhizosphereDIEEPVLKTILEKLKQESGVTAEVPLDRLVDLSLLREVKAEVGKK*
Ga0079219_1090082423300006954Agricultural SoilIEEPVLKTILEKIKQESGVTAEVPLDRLVDLSLLREVKTELGKK*
Ga0075419_1032184813300006969Populus RhizosphereGDIEESVLKSIVDKIRQESGFAGEIPLDRLFDLSILREVKSELRKK*
Ga0079218_1233369413300007004Agricultural SoilGDIEGAVLKSIIDKIKQESGIAAEIPVDRLVDLSILREARAELRNR*
Ga0066710_10046031743300009012Grasslands SoilDTFKILKQVVNSDGDIEEAVLKSIIDKIRQESGISAEVPADRLVDLSILREVRAELRKR
Ga0105098_1034936923300009081Freshwater SedimentDKIRQESGITAEVSADRLIDLAVLREVQAELKKK*
Ga0105107_1031054533300009087Freshwater SedimentEPVLKSIVDKIRQESGISTEIPLDRLVDLTLLREVKAELRKK*
Ga0099830_1000573933300009088Vadose Zone SoilVNSDGDVEEAVLRSIIEKIRQESSMTTEIPMDRLVDLSILREVKGELRKK*
Ga0105245_1286142613300009098Miscanthus RhizosphereYRILKQIVNTDGDIEEPVLKTILEKLKQESGVTAEVPLDRLVDLSLLREVKAEVGKK*
Ga0075418_1081144113300009100Populus RhizosphereDGDIEEPVFKSIIDKIRQESGITAEIPADRLVDLSLLREVRKR*
Ga0066709_10393866023300009137Grasslands SoilNSDGDIEEPVFKSIIDKIRQESGITAEIPPERLVDLSLLREVRKR*
Ga0114129_1227402413300009147Populus RhizosphereTTILEKIKQESGVTAEVPLDRLVDLSLLREVKAELGKK*
Ga0111538_1139015533300009156Populus RhizosphereVLKSILNKIRQESGIAAEIPVDRLVDLSMLREARADLRKK*
Ga0105092_1021388513300009157Freshwater SedimentVVNSDGDIEDAVFKSIIDKIRQESGITAEIPVDRLVDLSLLREVRKR*
Ga0105092_1071629813300009157Freshwater SedimentPVFKSIIDKIRQESGITAEVSADRLIDLAILREVQAELKKK*
Ga0105092_1097637023300009157Freshwater SedimentVNTDGDIEEPVLKSIIDKIRQESGYAAEISLDRLVDLTVLREVQKELRKK*
Ga0075423_1083592613300009162Populus RhizospherePVLRAILDKIKQESGITGEVPVDRLFDLSLLREVRAELRKR*
Ga0075423_1152812323300009162Populus RhizosphereILKQIVNTGGDIEEPVLKTILEKLKQESGVTAEVPLDRLVDLSLLRDVKAEVGKK*
Ga0105249_1003758073300009553Switchgrass RhizosphereLKQIVNTDGDIEEPVLKTILEKLKQESGVTAEVPLDRLVDLSLLREVKAEVGKK*
Ga0105249_1312662813300009553Switchgrass RhizosphereTILEKIKQESGVTAEVPLDRLVDLSLLREVKAELGKK*
Ga0105074_106587813300010029Groundwater SandKILKQVVNFDGDIEEPVFRSIVDKIRQESGMTAEIPADRLVDLSLLREARKR*
Ga0126305_1045719623300010036Serpentine SoilDSYKILLKVLNSDGDIDDTTLKTIIDKIRQESGLTAEIPSDRLVDLTLLREVKAELRKK*
Ga0126304_1089989813300010037Serpentine SoilGDIGDATLKSIIDKIFQESGLTAEIPSDRLVDLTLLREVKAELRKK*
Ga0126380_1179167013300010043Tropical Forest SoilSDGDIEDPVLKSIIDKIRQESGITAEISADRLIDLSPLREVRKR*
Ga0126380_1193233813300010043Tropical Forest SoilSDGDIEDPVLKSIIDKIRQESGITAEIPADRLTDLSLLREVRKR*
Ga0126384_1130527423300010046Tropical Forest SoilVNSDGDIEEPVLKSIIDKVTQESGIGVEIPMNRLPDLTILREVKAELKKK*
Ga0126373_1001749143300010048Tropical Forest SoilVLKSIIDKVTQESGIGVEIPMNRLPDLTILREVKAELK
Ga0134128_1036777313300010373Terrestrial SoilIEEPVLKTILEKLKQESGVIAEVPLDRLVDLSLLREVKAEVGKK*
Ga0134122_1057321423300010400Terrestrial SoilVLKTILEKLKQEAGVIAEVPLDRLVDLSLLREVKAEVGKK*
Ga0137393_1171046113300011271Vadose Zone SoilILRQIVNSDGDVEEPVLKSIIDKIRLESGIAAEIPMDRLVDLSMLREVKGELRKK*
Ga0137455_124692413300011429SoilVLKSIVDKIRQEAGFAAEIPLDRLFDLSILREVKTELRKR*
Ga0137421_112511713300012039SoilIEEPVLKSIVDKIRQESGISAEIPLDRLVDLTLLREVKAELRKK*
Ga0137430_113089523300012041SoilLKSIVDKIRQESGISAEIPLDRLVDLTLLREVKAELRKK*
Ga0137327_108196913300012173SoilYRILRQIVNADGDIEEPVLKAIIDKIRQESGFAAEISLDRLVDLSPLREVKAELRRK*
Ga0137376_1053927533300012208Vadose Zone SoilDTYKTLRQIVNSDGDIEDAVLKSILDKIKQESGITGEVPADRLVDLSLLREVRAELRKR*
Ga0137377_1107801713300012211Vadose Zone SoilTIDKIRQESGISAEVPADRLVDLSILREVRAELRKR*
Ga0137447_111009313300012226SoilEPVLKSIIDKLRAESGIAAEIPSERLVDLSLLREVKAELKKRAP*
Ga0137369_1028646823300012355Vadose Zone SoilVLKSIIDKIKQESGISAEIPLDRLVDLSLLREARAELRKR*
Ga0157336_100152233300012477Arabidopsis RhizosphereDGDIEEPVLRAILDKLKQESGIAGEVPVDRLVDLSLLREVRVELRKR*
Ga0157337_100094533300012483Arabidopsis RhizosphereQIVNADGDIEEPVLRAILDKLKQEAGIAGEVSVDRLVDLSLLREVRVELRKR*
Ga0157332_100550233300012511SoilDTYKILRQIVNADGDIEEPVLRAILDKLKQESGIAGEVPVDRLVDLSLLRDVRVELRKP*
Ga0157338_107210213300012515Arabidopsis RhizosphereKQIVNTDGDIEEPVLKTILEKIKQESGVTAEVPLDRLVDLSLLREVKAEFSRK*
Ga0137419_1109743923300012925Vadose Zone SoilIAADTYKILRQIVNSDGDIEDAVLKSILDKIKQESGITGEVPADRLVDLSLLREVHAEMRKR*
Ga0137404_1000962363300012929Vadose Zone SoilLKQVVNSDGDIEEAVLKSIIDKIRQESGISAEVPADRLVDLSILREVRAELRKR*
Ga0137410_1195734413300012944Vadose Zone SoilDKIKQESGITGEVPADRLVDLSLLREVHAEMRKR*
Ga0126369_1182578723300012971Tropical Forest SoilVNSDGDIEEPVLKSIIDKVTQESGIGVEIPMNRLPDLTILREVKAELKKK
Ga0157372_1026359443300013307Corn RhizosphereLEKLKQESGVIAEVPFDRLVDLSLLREVKAEVGKK*
Ga0075326_111985713300014271Natural And Restored WetlandsDAVFKSIIEKIRQESNIAAEVPPERLADLSILHEEKKR*
Ga0075344_104709013300014296Natural And Restored WetlandsNTDGDIEEPVLKSIVDKVRQESGISAEIPLDRLVDLTLLREVKAELRKK*
Ga0180090_109546623300014866SoilMNTGRDHQEPVIKFIVDKIRQESGISAEIPLDRLVDLTLLREVKAELRKK*
Ga0180065_105221813300014878SoilADTYRILKQVVNADGDIEDAVFKSIIDKIRQESGIAAEVPAERLVDLSILREVRKR*
Ga0157376_1272445613300014969Miscanthus RhizosphereGDIEEPVLRASLDKLKQESGIAGEVPVDRLVDLSLLREVRVELRKR*
Ga0173483_1019281413300015077SoilTYRILKQIVNTDGDIEEPVLKTILEKIKQESGVTAEVPLDRLVDLSLLREVKAEVGKK*
Ga0137409_1123942213300015245Vadose Zone SoilKILRQIVNSDGDIEDAVLKSILDKIKQESGITGEVPADRLVDLSLLREVHAEMRKR*
Ga0180081_107804313300015253SoilNPDGDIDDATLKSIIDKIRQESGLTAEIPSDRLVDLSILREVRAELRKR*
Ga0132258_1183848913300015371Arabidopsis RhizosphereADTFKILRQIVNTDGDIEEPVLKSILEKIRQESGFSAEIPVDRVVDLSLLRQVKADLRKK
Ga0132256_10047282333300015372Arabidopsis RhizosphereKTILEKIKQESGVTAEVPLDRLVDLSLLREVKAELSKK*
Ga0132256_10109194213300015372Arabidopsis RhizosphereIEEPVLKTILEKIKQESGVTAEVPLDRLVDLSLLREVTGELGKK*
Ga0132256_10198151713300015372Arabidopsis RhizosphereADGDIEEPVLRAILDKLKQESGIAGEVSVDWLVDLSLLREVRVELRKR*
Ga0132257_10143639113300015373Arabidopsis RhizosphereEEPVLKTILEKIKQESGVTAEVPLDRLVDLSLLREVKAELSKK*
Ga0187787_1004750533300018029Tropical PeatlandSIVDKIRQETGYAAEIPLDRLVDLSILREVKAELRKKQG
Ga0184634_1009342013300018031Groundwater SedimentQIVNADGDIEEPVLKSIIDKIRHELGFAAEIPLDRLVDLSLLREIKAELRRR
Ga0184637_1020618623300018063Groundwater SedimentSIVDKIRQEFGIATEIPLDRLVDLSVLREARAELRKR
Ga0184640_1000366613300018074Groundwater SedimentIDKIKQESGISAEIPMDRLVDLSLLREVRAEIRKR
Ga0184632_1001734253300018075Groundwater SedimentVNSDGDIEEPVFKSIIDKIRQESGITAEVPADRLIDLSLLREVRKR
Ga0184609_1005924413300018076Groundwater SedimentILKQVVNSDGDIEETVLKSIIDKIKQESGITTEIPMDRLVDLSLLREVRAEIRKR
Ga0184633_1041296313300018077Groundwater SedimentEESVLKSIIDKIKQESGISAEIPMDRLVDLSLLREVRAEIRKR
Ga0184639_1006305543300018082Groundwater SedimentSDGDIEESVLKSIIDKIKQESGISAEIPMDRLVDLSLLREVRAEIRKR
Ga0190265_1248877013300018422SoilDGDIEDAVLKSIVDKIRQETGFASEIPMDRLVDLGILREVKAELKKR
Ga0190265_1267104813300018422SoilVLNADGDIEEPVLKSILNKIRQESGITAEIPVDRLVDLSILREARAELRSR
Ga0190268_1176972513300018466SoilEPVLKSILDKIRQESGYAAEIALDRLVDLTVLREVQKELRKK
Ga0190270_1184504213300018469SoilIVDKIRQESGFAGEIPLDRLFDLSLLREVKSELRKK
Ga0190271_1118347213300018481SoilKSILNKIRQEAGIAAEVPVDRLVDLSILREARADLRKR
Ga0190271_1208039523300018481SoilADGDLEEPVLKSIIDKLRAESGIAAEIPSERLVDLSVLREVRAELKKRTP
Ga0210378_1025764113300021073Groundwater SedimentKSIIDKIKQESGITAEIPMDRLVDLSLLREVRAEIRKR
Ga0210378_1040941313300021073Groundwater SedimentLKSIIDKIRQESGISAEVPADRLVDLSILREVRTELRKR
Ga0209320_1019502113300025155SoilVLKSIVDKIRQESGITTEIPLDRLVDPSVLREARAELRKR
Ga0210061_100954323300025537Natural And Restored WetlandsQIVNTDGDIEEPILKAIVDKIRQESGITAEVPLDRVVDLALLREVQKELLKK
Ga0210076_100261663300025567Natural And Restored WetlandsIVNTDGDIEEPILKAIVDKIRQESGITAEVPLDRVVDLALLREVQKELLKK
Ga0207684_1141946613300025910Corn, Switchgrass And Miscanthus RhizosphereVLRSIIEKIRQESSMTTEIPMDRLVDLSILREVKAELKRR
Ga0207684_1163491223300025910Corn, Switchgrass And Miscanthus RhizosphereAVLKSILDKIKQESGITGEVPADRLVDLSLLREVHAEMRKR
Ga0207660_1005908243300025917Corn RhizosphereLKTILEKLKQESGVIAEVPLDRLVDLSLLREVKAEVGKK
Ga0207701_10011949103300025930Corn, Switchgrass And Miscanthus RhizosphereKILRQIVNADGDIEEPVLRAILDKLKQESGIAGEVPVDRLVDLSLLREVRVELRKR
Ga0207644_1046653413300025931Switchgrass RhizosphereIVNTDGDIEEPVLKTILEKLKQESGVTAEVPLDRLVDLSLLREVKAEVGKK
Ga0207690_1050399313300025932Corn RhizosphereTILEKIKQESGVTAEVPLDRLVDLSLLREVKTELGKK
Ga0207712_1091718113300025961Switchgrass RhizosphereLKQIVNTDGDIEEPVLKTILEKLKQESGVTAEVPLDRLVDLSLLREVKAEVGKK
Ga0207668_1047444813300025972Switchgrass RhizosphereADGDIEEPVLRAILDKLKQESGIAGEVPVDRLVDLSLLREVRVELRKR
Ga0207703_1142574923300026035Switchgrass RhizosphereRILKQIVNTDGDIEEPVLKTILEKLKQEAGVIAEVPLDRLVDLSLLREVKAEVGKK
Ga0207708_1133395513300026075Corn, Switchgrass And Miscanthus RhizosphereVLNADGDIEEPVLKSILNKIRQESGIAAEIPVDRLVDLS
Ga0207648_1228438623300026089Miscanthus RhizosphereTDGDIEEPVLKSILEKIRQESGFSAEIPVDRVVDLSLLRQVKADLRKK
Ga0208291_100304243300026111Natural And Restored WetlandsADTFKILKQIVNTDGDIEEPILKAIVDKIRQESGITAEVPLDRVVDLALLREVQKELLKK
Ga0207683_1192932513300026121Miscanthus RhizosphereTYRILKQIVNTDGDIEEPVLKTILEKIKQESGVTAEVPLDRLVDLSLLREVKAELSKK
Ga0209971_103584413300027682Arabidopsis Thaliana RhizosphereTIKILKQVVNTDGDIEEPVLKSIVEKIRQETGFAAEVPLDRLVDLSILRELRAELRQR
Ga0209819_1019598123300027722Freshwater SedimentSIIDKIRQESGITAEVPADRLIDLAVLREVQAELKKK
Ga0209819_1023992423300027722Freshwater SedimentPVLKSIIDKIRQESGYAAEISLDRLVDLTVLREVQKELRKK
Ga0209178_125248523300027725Agricultural SoilVLKTILEKIKQESGVTAEVPLDRLVDLSLLREVKGELGKK
Ga0209701_1005530013300027862Vadose Zone SoilEAVLRSIIEKIRQESSMTTEIPMDRLVDLSILREVKGELRKK
Ga0209481_1048050413300027880Populus RhizosphereGDIEESVLKSIVDKIRQESGFAGEIPLDRLFDLSILREVKSELRKK
Ga0209486_1063597013300027886Agricultural SoilQIKQVLNVDGDIEEPVLKSILNKIRQESGIAAEIPVDRLVDLSMLREAKSELRKK
Ga0268265_1161366823300028380Switchgrass RhizosphereVNTDGDIEEPVLKTILEKLKQESGVIAEVPLDRLVDLSLLREVKAEVGKK
Ga0272482_1012869923300028578SoilSILNKLRQEAGIAAEIPVDRLVDLSILREARAELRNR
Ga0302046_1091046813300030620SoilRIVNTDGDIEEPVLRSIVDKIRQESAVTAEVPLDRVVDLALLREVQKELLKK
Ga0307499_1017147823300031184SoilVNADGDIEEPVLRAILDKLKQESGIAGEVPVDRLVDLSLLREVRVELRKR
(restricted) Ga0255334_103104223300031237Sandy SoilDGDIEEPVLKSIIDKIRQESGLAAEVPLDRLVDLSILREVRAELRKW
Ga0310888_1014320833300031538SoilDDTTLKTIIDKIRQESGLTAEIPSDRLVDLTLLREVKAELRKK
Ga0306918_1013865633300031744SoilILEKIKQESGVSEEVPLDRLVDLSLLREVKVELSK
Ga0318546_1080037323300031771SoilVLRAILEKIKQESGVSEEVPLDRLVDLSLLREVKVELSK
Ga0307473_1079732713300031820Hardwood Forest SoilDGDIEEPVLKSIIDIIRQEAGFAAEIALDRLVYLSLVREVKIELRKR
Ga0310917_1051709423300031833SoilRQVVNSDGDIEEPVLKSIIDKIRQESGVAAEVPAERLVDLSILREVATEFKKRQP
Ga0307406_1019079033300031901RhizosphereADGDIEEPVLKSILNKIRQESGIAAEIPVDRLVDLSMLREARADLRKK
Ga0310900_1103232013300031908SoilVNADGDIEEPVFKSIIDKIRQESGITAEIPADRLVDLSLLREVRKR
Ga0306923_1224052023300031910SoilDKIRQESGVAAEVPAERLVDLSILREVATEFKKRQP
Ga0310912_1092567923300031941SoilEPVLRAILEKIKQESGVSEEVPLDRLVDLSLLREVKVELSK
Ga0307416_10370811123300032002RhizosphereSYRQIKRVLNADGDIEEPVLKSILDKIRQESGIAAEIPVDRLVDLSMLREAKAELRKR
Ga0310895_1011832423300032122SoilDGDIEEPVLKSILNKIRQESGIAAEIPVDRLVDLSMLREARADLRKK
Ga0315912_1057562313300032157SoilTDGDIEEPVLKSIVDKIRQESGISAEIPLDRLVDLTLLREVKAELRKK
Ga0310812_1042316913300032421SoilNTDGHIEEPVLKTIFEKIKQESEITAEVPMDRLVDLSPLREAQKELRRK
Ga0335085_1103388313300032770SoilVLESIVDKIRQETGFAAEIPLDRLVDLSLLREVKAELRKKQG
Ga0335080_1210186713300032828SoilLKSIIDKIRQESGVAAEVSAERLVDLSILREVEAELKRR
Ga0316600_1124177523300033481SoilTYRILRQVINTDGDIEEPVLKSIVDKIRQESGISAEIPLDRLVDLTLLREVKAELRKK
Ga0364932_0150361_762_8843300034177SedimentVLKSIVDKIRQESGITTEIPLDRLVDLSVLREARAELRRR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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