Metagenome / Metatranscriptome Family F038297

Basic Information
Family ID	F038297
Family Type	Metagenome / Metatranscriptome
Number of Sequences	166
Average Sequence Length	48 residues
Representative Sequence	MGQAAKPTRQNRTITVDFQDEATYFQLLGDTKAFVEFVLAFILS
Number of Associated Samples	127
Number of Associated Scaffolds	166

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.58 %
% of genes near scaffold ends (potentially truncated)	81.33 %
% of genes from short scaffolds (< 2000 bps)	93.98 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Most Common Taxonomy
Group	Bacteria (75.301 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.699 % of family members)
Environment Ontology (ENVO)	Unclassified (34.940 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.217 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.56% β-sheet: 0.00% Coil/Unstructured: 69.44%
Feature Viewer

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Pfam ID	Name	% Frequency in 166 Family Scaffolds
PF12759	HTH_Tnp_IS1	1.81
PF03050	DDE_Tnp_IS66	1.20
PF01161	PBP	1.20
PF01381	HTH_3	1.20
PF03631	Virul_fac_BrkB	1.20
PF00072	Response_reg	0.60
PF04365	BrnT_toxin	0.60
PF04255	DUF433	0.60
PF00873	ACR_tran	0.60
PF05368	NmrA	0.60
PF13359	DDE_Tnp_4	0.60
PF05016	ParE_toxin	0.60
PF00034	Cytochrom_C	0.60
PF00078	RVT_1	0.60
PF13592	HTH_33	0.60
PF14104	DUF4277	0.60
PF00903	Glyoxalase	0.60
PF00892	EamA	0.60
PF07042	TrfA	0.60
PF02771	Acyl-CoA_dh_N	0.60
PF01656	CbiA	0.60
PF13586	DDE_Tnp_1_2	0.60
PF00194	Carb_anhydrase	0.60
PF13701	DDE_Tnp_1_4	0.60
PF01609	DDE_Tnp_1	0.60
PF07045	DUF1330	0.60
PF14384	BrnA_antitoxin	0.60
PF12686	DUF3800	0.60
PF02350	Epimerase_2	0.60
PF13714	PEP_mutase	0.60
PF00872	Transposase_mut	0.60
PF01850	PIN	0.60
PF00528	BPD_transp_1	0.60
PF07592	DDE_Tnp_ISAZ013	0.60
PF13551	HTH_29	0.60
PF13145	Rotamase_2	0.60
PF01594	AI-2E_transport	0.60
PF00239	Resolvase	0.60
PF13546	DDE_5	0.60
PF01551	Peptidase_M23	0.60
PF00296	Bac_luciferase	0.60
PF00684	DnaJ_CXXCXGXG	0.60
PF13640	2OG-FeII_Oxy_3	0.60
PF13560	HTH_31	0.60
PF02796	HTH_7	0.60
PF13751	DDE_Tnp_1_6	0.60
PF01526	DDE_Tnp_Tn3	0.60
PF13424	TPR_12	0.60
PF01610	DDE_Tnp_ISL3	0.60
PF00881	Nitroreductase	0.60
PF13340	DUF4096	0.60
PF03400	DDE_Tnp_IS1	0.60
PF13231	PMT_2	0.60
PF01051	Rep_3	0.60
PF01425	Amidase	0.60
PF02515	CoA_transf_3	0.60

COG ID	Name	Functional Category	% Frequency in 166 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	1.20
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	1.20
COG3436	Transposase	Mobilome: prophages, transposons [X]	1.20
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.60
COG0381	UDP-N-acetylglucosamine 2-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.60
COG0484	DnaJ-class molecular chaperone with C-terminal Zn finger domain	Posttranslational modification, protein turnover, chaperones [O]	0.60
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.60
COG0707	UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	Cell wall/membrane/envelope biogenesis [M]	0.60
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	0.60
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.60
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.60
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.60
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.60
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.60
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.60
COG2929	Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin system	Defense mechanisms [V]	0.60
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.60
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.60
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.60
COG3338	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.60
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.60
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.60
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.60
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.60
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.60
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.60
COG5527	Protein involved in initiation of plasmid replication	Mobilome: prophages, transposons [X]	0.60
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.90 %
Unclassified	root	N/A	24.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.90 %
Unclassified	root	N/A	24.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.30 %
Unclassified	root	N/A	24.10 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.10 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	21.08 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	15.06 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.41 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	1.20 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.20 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.60 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.60 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.60 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.10 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	18.67 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	15.06 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.41 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.81 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	1.20 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.20 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.20 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.20 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.60 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.60 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.60 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.60 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.10 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	18.67 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	15.06 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.41 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.20 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.60 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.60 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.60 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.60 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.60 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.60 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	0.60 %
Candidatus Poribacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria	0.60 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.60 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.60 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.60 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.60 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.10 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	17.47 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	15.06 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.20 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.60 %
unclassified Candidatus Poribacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria	0.60 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples	0.60 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.60 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.60 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.60 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.60 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.60 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.60 %
Candidatus Competibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae	0.60 %
Methanophagales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanophagales	0.60 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.60 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.60 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.60 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.60 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.10 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	17.47 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	15.06 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.20 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.60 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.60 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.60 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.60 %
Acaryochloridaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Acaryochloridaceae	0.60 %
Massilia group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group	0.60 %
unclassified Desulfobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales	0.60 %
unclassified Methanophagales	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanophagales → unclassified Methanophagales	0.60 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.60 %
Candidatus Competibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Competibacter	0.60 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.60 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.60 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.60 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.60 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.60 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.10 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	17.47 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	15.06 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.20 %
Desulfobacterales bacterium S5133MH4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium S5133MH4	0.60 %
Methanophagales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanophagales → unclassified Methanophagales → Methanophagales archaeon	0.60 %
Azospirillum brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	0.60 %
Massilia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia	0.60 %
Candidatus Competibacter phosphatis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Competibacter → Candidatus Competibacter phosphatis	0.60 %
Acaryochloris	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Acaryochloridaceae → Acaryochloris	0.60 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.60 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.60 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.60 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.60 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.60 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.60 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.60 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.60 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.60 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.10 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	17.47 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	15.06 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.20 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.20 %
Massilia yuzhufengensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia yuzhufengensis	0.60 %
Desulfobacterales bacterium S5133MH4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium S5133MH4	0.60 %
Methanophagales archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanophagales → unclassified Methanophagales → Methanophagales archaeon	0.60 %
Azospirillum brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	0.60 %
Candidatus Competibacter phosphatis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Competibacter → Candidatus Competibacter phosphatis	0.60 %
Acaryochloris	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Acaryochloridaceae → Acaryochloris	0.60 %
uncultured Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	0.60 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.60 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.60 %
Candidatus Poribacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	0.60 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.60 %
Candidatus Entotheonella factor	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	0.60 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.60 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.60 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.60 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_103398717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → Azospirillum brasilense	520	Open in IMG/M
3300000955\|JGI1027J12803_104603783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	859	Open in IMG/M
3300000956\|JGI10216J12902_108233531	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300000956\|JGI10216J12902_113419885	Not Available	1110	Open in IMG/M
3300001139\|JGI10220J13317_11365268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	707	Open in IMG/M
3300001228\|SwM_135023	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	522	Open in IMG/M
3300001431\|F14TB_101031071	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	663	Open in IMG/M
3300003993\|Ga0055468_10164145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	668	Open in IMG/M
3300003998\|Ga0055472_10215793	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	595	Open in IMG/M
3300005174\|Ga0066680_10926648	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300005180\|Ga0066685_10303386	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → unclassified Desulfobacterales → Desulfobacterales bacterium S5133MH4	1106	Open in IMG/M
3300005294\|Ga0065705_11043480	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	513	Open in IMG/M
3300005295\|Ga0065707_10484862	Not Available	770	Open in IMG/M
3300005332\|Ga0066388_107116195	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	563	Open in IMG/M
3300005332\|Ga0066388_107947287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	530	Open in IMG/M
3300005334\|Ga0068869_101339848	Not Available	632	Open in IMG/M
3300005343\|Ga0070687_100893150	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	636	Open in IMG/M
3300005441\|Ga0070700_100835798	All Organisms → cellular organisms → Bacteria → Proteobacteria	744	Open in IMG/M
3300005445\|Ga0070708_100464003	Not Available	1195	Open in IMG/M
3300005471\|Ga0070698_100109841	All Organisms → cellular organisms → Bacteria	2724	Open in IMG/M
3300005518\|Ga0070699_100212679	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300005536\|Ga0070697_101174459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	684	Open in IMG/M
3300005557\|Ga0066704_10926008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	539	Open in IMG/M
3300005559\|Ga0066700_10321319	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella factor	1092	Open in IMG/M
3300005598\|Ga0066706_11529299	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300005617\|Ga0068859_102851079	Not Available	530	Open in IMG/M
3300005764\|Ga0066903_104170610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	773	Open in IMG/M
3300005937\|Ga0081455_10001877	All Organisms → cellular organisms → Bacteria	25286	Open in IMG/M
3300006032\|Ga0066696_10673174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	666	Open in IMG/M
3300006046\|Ga0066652_101564162	Not Available	608	Open in IMG/M
3300006196\|Ga0075422_10015791	All Organisms → cellular organisms → Bacteria	2518	Open in IMG/M
3300006800\|Ga0066660_10317182	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Poribacteria → unclassified Candidatus Poribacteria → Candidatus Poribacteria bacterium	1251	Open in IMG/M
3300006846\|Ga0075430_100102972	All Organisms → cellular organisms → Bacteria	2383	Open in IMG/M
3300006846\|Ga0075430_100676095	Not Available	851	Open in IMG/M
3300006847\|Ga0075431_100230643	All Organisms → cellular organisms → Bacteria	1886	Open in IMG/M
3300006847\|Ga0075431_101451759	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	645	Open in IMG/M
3300006853\|Ga0075420_101757865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	531	Open in IMG/M
3300006880\|Ga0075429_100449988	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1128	Open in IMG/M
3300007076\|Ga0075435_100937765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	755	Open in IMG/M
3300007076\|Ga0075435_100985474	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	736	Open in IMG/M
3300007255\|Ga0099791_10222667	Not Available	892	Open in IMG/M
3300007255\|Ga0099791_10463770	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300007258\|Ga0099793_10152254	Not Available	1095	Open in IMG/M
3300009012\|Ga0066710_101958790	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	872	Open in IMG/M
3300009089\|Ga0099828_10335104	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1363	Open in IMG/M
3300009089\|Ga0099828_10925811	All Organisms → cellular organisms → Bacteria → Terrabacteria group	778	Open in IMG/M
3300009089\|Ga0099828_11302406	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	643	Open in IMG/M
3300009090\|Ga0099827_11132380	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	680	Open in IMG/M
3300009090\|Ga0099827_11580018	Not Available	571	Open in IMG/M
3300009100\|Ga0075418_10185694	Not Available	2214	Open in IMG/M
3300009137\|Ga0066709_101974321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	809	Open in IMG/M
3300009137\|Ga0066709_102341820	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	729	Open in IMG/M
3300009137\|Ga0066709_104324052	Not Available	518	Open in IMG/M
3300009143\|Ga0099792_10940391	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300009147\|Ga0114129_10056696	All Organisms → cellular organisms → Bacteria	5486	Open in IMG/M
3300009147\|Ga0114129_10788692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1213	Open in IMG/M
3300009147\|Ga0114129_11562689	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	809	Open in IMG/M
3300009147\|Ga0114129_11700228	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	770	Open in IMG/M
3300009147\|Ga0114129_13189654	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	533	Open in IMG/M
3300009147\|Ga0114129_13331907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	519	Open in IMG/M
3300009156\|Ga0111538_13511793	Not Available	544	Open in IMG/M
3300009162\|Ga0075423_10258563	All Organisms → cellular organisms → Bacteria	1824	Open in IMG/M
3300009168\|Ga0105104_10041755	All Organisms → cellular organisms → Bacteria	2524	Open in IMG/M
3300009545\|Ga0105237_12439863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Acaryochloridaceae → Acaryochloris	533	Open in IMG/M
3300009800\|Ga0105069_1040441	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	555	Open in IMG/M
3300009811\|Ga0105084_1012525	Not Available	1328	Open in IMG/M
3300010043\|Ga0126380_11808671	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	553	Open in IMG/M
3300010046\|Ga0126384_10798930	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	844	Open in IMG/M
3300010046\|Ga0126384_11150674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	713	Open in IMG/M
3300010046\|Ga0126384_11714874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	594	Open in IMG/M
3300010047\|Ga0126382_10808472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	800	Open in IMG/M
3300010047\|Ga0126382_11079590	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	710	Open in IMG/M
3300010047\|Ga0126382_11837303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	571	Open in IMG/M
3300010047\|Ga0126382_11845744	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300010047\|Ga0126382_11852449	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	569	Open in IMG/M
3300010048\|Ga0126373_10555038	All Organisms → cellular organisms → Bacteria → Proteobacteria	1197	Open in IMG/M
3300010359\|Ga0126376_11169416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	782	Open in IMG/M
3300010359\|Ga0126376_11833387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	645	Open in IMG/M
3300010360\|Ga0126372_10821608	Not Available	923	Open in IMG/M
3300010362\|Ga0126377_10696862	Not Available	1068	Open in IMG/M
3300010362\|Ga0126377_11777375	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300010366\|Ga0126379_11794320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	717	Open in IMG/M
3300010399\|Ga0134127_12708356	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300011119\|Ga0105246_11789550	Not Available	587	Open in IMG/M
3300011119\|Ga0105246_12240392	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	532	Open in IMG/M
3300012096\|Ga0137389_11468008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	578	Open in IMG/M
3300012199\|Ga0137383_10613239	Not Available	796	Open in IMG/M
3300012199\|Ga0137383_11319114	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	514	Open in IMG/M
3300012201\|Ga0137365_10567619	Not Available	832	Open in IMG/M
3300012202\|Ga0137363_10396645	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1149	Open in IMG/M
3300012203\|Ga0137399_10902590	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300012205\|Ga0137362_10465926	Not Available	1094	Open in IMG/M
3300012205\|Ga0137362_11489024	Not Available	563	Open in IMG/M
3300012207\|Ga0137381_10934377	Not Available	749	Open in IMG/M
3300012350\|Ga0137372_10350272	Not Available	1131	Open in IMG/M
3300012351\|Ga0137386_11179749	Not Available	537	Open in IMG/M
3300012358\|Ga0137368_10419342	Not Available	875	Open in IMG/M
3300012361\|Ga0137360_10139365	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300012362\|Ga0137361_10263676	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300012582\|Ga0137358_10384043	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	950	Open in IMG/M
3300012898\|Ga0157293_10160780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	644	Open in IMG/M
3300012925\|Ga0137419_10093036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Massilia → Massilia yuzhufengensis	2068	Open in IMG/M
3300012929\|Ga0137404_10109221	All Organisms → cellular organisms → Bacteria	2243	Open in IMG/M
3300012929\|Ga0137404_11126095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	720	Open in IMG/M
3300012930\|Ga0137407_10730431	Not Available	933	Open in IMG/M
3300012930\|Ga0137407_11149474	All Organisms → cellular organisms → Bacteria → Proteobacteria	736	Open in IMG/M
3300012930\|Ga0137407_11411883	Not Available	662	Open in IMG/M
3300012948\|Ga0126375_10592007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	845	Open in IMG/M
3300012948\|Ga0126375_11453576	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300012971\|Ga0126369_10573435	All Organisms → cellular organisms → Bacteria → Proteobacteria	1195	Open in IMG/M
3300012971\|Ga0126369_13375257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	523	Open in IMG/M
3300012977\|Ga0134087_10040338	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300013306\|Ga0163162_10113364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	2810	Open in IMG/M
3300013306\|Ga0163162_10514035	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1327	Open in IMG/M
3300014267\|Ga0075313_1012241	All Organisms → cellular organisms → Bacteria	1933	Open in IMG/M
3300014268\|Ga0075309_1184189	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanophagales → unclassified Methanophagales → Methanophagales archaeon	546	Open in IMG/M
3300014487\|Ga0182000_10303976	Not Available	666	Open in IMG/M
3300015054\|Ga0137420_1355591	Not Available	1674	Open in IMG/M
3300015241\|Ga0137418_11097173	Not Available	567	Open in IMG/M
3300015245\|Ga0137409_10594060	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300015371\|Ga0132258_12046924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1440	Open in IMG/M
3300015371\|Ga0132258_13928528	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300015374\|Ga0132255_104230749	Not Available	609	Open in IMG/M
3300016357\|Ga0182032_11799502	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300016422\|Ga0182039_11582007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	598	Open in IMG/M
3300017947\|Ga0187785_10588209	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	569	Open in IMG/M
3300018053\|Ga0184626_10251120	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	742	Open in IMG/M
3300018076\|Ga0184609_10093654	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300018076\|Ga0184609_10358367	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	680	Open in IMG/M
3300018082\|Ga0184639_10261615	Not Available	914	Open in IMG/M
3300018431\|Ga0066655_11166115	Not Available	543	Open in IMG/M
3300018433\|Ga0066667_11841452	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	549	Open in IMG/M
3300018466\|Ga0190268_11906049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	541	Open in IMG/M
3300018468\|Ga0066662_10514072	Not Available	1095	Open in IMG/M
3300019361\|Ga0173482_10071433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → environmental samples → uncultured Chloroflexia bacterium	1189	Open in IMG/M
3300019377\|Ga0190264_11665226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	566	Open in IMG/M
3300019789\|Ga0137408_1246318	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300020170\|Ga0179594_10279184	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	632	Open in IMG/M
3300021081\|Ga0210379_10440805	Not Available	577	Open in IMG/M
3300024330\|Ga0137417_1391597	All Organisms → cellular organisms → Bacteria	1799	Open in IMG/M
3300025901\|Ga0207688_11059162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	512	Open in IMG/M
3300025915\|Ga0207693_10144515	All Organisms → cellular organisms → Bacteria → Proteobacteria	1870	Open in IMG/M
3300025915\|Ga0207693_11134781	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	592	Open in IMG/M
3300025940\|Ga0207691_10933939	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	725	Open in IMG/M
3300025961\|Ga0207712_10339340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1245	Open in IMG/M
3300025961\|Ga0207712_10342671	Not Available	1240	Open in IMG/M
3300026075\|Ga0207708_11303774	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300026116\|Ga0207674_11372550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	676	Open in IMG/M
3300026308\|Ga0209265_1179079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	560	Open in IMG/M
3300026507\|Ga0257165_1089155	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300027490\|Ga0209899_1109345	Not Available	522	Open in IMG/M
3300027643\|Ga0209076_1077554	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300027643\|Ga0209076_1187214	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300027846\|Ga0209180_10321271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → Candidatus Competibacteraceae → Candidatus Competibacter → Candidatus Competibacter phosphatis	885	Open in IMG/M
3300027880\|Ga0209481_10278154	Not Available	846	Open in IMG/M
3300027882\|Ga0209590_10689483	Not Available	654	Open in IMG/M
3300027903\|Ga0209488_10202739	All Organisms → cellular organisms → Bacteria → Proteobacteria	1494	Open in IMG/M
3300028792\|Ga0307504_10228800	Not Available	672	Open in IMG/M
3300031228\|Ga0299914_11494928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	527	Open in IMG/M
3300031421\|Ga0308194_10145184	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	727	Open in IMG/M
3300031740\|Ga0307468_100208889	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300031854\|Ga0310904_10538861	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300031858\|Ga0310892_10603220	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300032002\|Ga0307416_101607438	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	755	Open in IMG/M
3300032205\|Ga0307472_101577274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	644	Open in IMG/M
3300034147\|Ga0364925_0260210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	646	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.71%
Host-Associated	Host-Associated	22.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.89%
Plants	Host-Associated → Plants	22.29%
Aquatic	Environmental → Aquatic	4.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.66%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.63%
Sediment	Environmental → Aquatic → Sediment	2.41%
Freshwater	Environmental → Aquatic → Freshwater	1.20%
Marine	Environmental → Aquatic → Marine	1.20%
Floodplain	Environmental → Terrestrial → Floodplain	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.06%
Loam	Environmental → Terrestrial → Soil → Loam	7.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.41%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.81%
Sand	Environmental → Terrestrial → Soil → Sand	1.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.81%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.20%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.20%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.06%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.01%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.41%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.81%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.81%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.20%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.20%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.20%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.60%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.60%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.05%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.81%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.81%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.20%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.20%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.20%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.20%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.20%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.60%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.60%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.60%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.60%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.60%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.60%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300001228	Switchgrass rhizosphere microbial communities from Knoxville, Tennessee, USA - 12_joined	Host-Associated	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009800	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_30_40	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F038297

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1033987171	3300000955	Soil	MGQSAKPTRQNRTITVDFHDETTYAELLGNTKAFVEFVLAFL
JGI1027J12803_1046037832	3300000955	Soil	MGQTAKPPRQNRTITVDFHNETTYFALVGNPKAFVEFVLAFLLS
JGI10216J12902_1082335311	3300000956	Soil	MGQSAKSPRQNRTITVDFHDETTYAALIGNPKAFVEFVLAFLLSLGFQLL
JGI10216J12902_1134198854	3300000956	Soil	MGQTAKATRANRTITVDFHDEATYDRLLDDTKAFVELILAFLLST
JGI10220J13317_113652682	3300001139	Soil	MTRKNRTITVDFHNEATYDQLLDDTKAFVEFVLAFLLAL
SwM_1350231	3300001228	Switchgrass Rhizosphere	MGQAAKPTRHNRTITVDFHDETTYLALLDTPHAFVEFVLAFLLALSAFSSSTKPAAV
F14TB_1010310711	3300001431	Soil	MGQTAKPTRHNRTITVDFHDETTYFALLDNSQAFVEFV
Ga0055468_101641451	3300003993	Natural And Restored Wetlands	MGQTAKAPRQNRTITVDFQDESTYFQLIHDGKAFVEFVLAF
Ga0055472_102157931	3300003998	Natural And Restored Wetlands	MGQTAKAPRQNRTITVDFQDESTYFQLIHDGKAFVEFVLAFILS
Ga0066680_109266482	3300005174	Soil	MGHAAKPIRHNRTLTVDFHDEATYFGLLAHTNAFVEFVLAFLLALGFQLLHKASCSE
Ga0066685_103033862	3300005180	Soil	MGQAAKPTRHNRTLTIDFHDETTYAELLGNTKAFVEFVFAFVLSIGFQ
Ga0065705_110434801	3300005294	Switchgrass Rhizosphere	MGQSAKPTRQNRTITVDFHDETTYAELLGNTKAFVEFVLAFILCLGFQLIHTQN*
Ga0065707_104848621	3300005295	Switchgrass Rhizosphere	MAQAAKTPRQNRTITVDFHDEATYSQLLDDTKAFIECVLAFIL
Ga0066388_1071161951	3300005332	Tropical Forest Soil	VSIAAKPRRENRTITIDFHNEATYFRLIDDGKAFVECVLAFLLALGFQLLHK
Ga0066388_1079472871	3300005332	Tropical Forest Soil	MGHAAKATRQNRTITVDFQDPSTYFQLINDRKAFVEFVLAFLL
Ga0068869_1013398481	3300005334	Miscanthus Rhizosphere	MGHAAKPTRHNRTLTIDFHDETTYAEILGNTKAFVEFVLAFIL
Ga0070687_1008931501	3300005343	Switchgrass Rhizosphere	MGQTVKPTRHNRTITVDFHDETTYAELLGHTKAFLEVVFAFLL
Ga0070700_1008357982	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MGQTAKPIRENRTITIDFHDESTYAELLGNTKAFVEFVFAFIRVAGKIMSW*
Ga0070708_1004640031	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGQTAKATRENRTITVDSHDETTYFALLGNTKAFVEFVFAFLLALGFQLLHKASCSEG
Ga0070698_1001098412	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MASDQGMKQGHAAKPTHYNRTLTIDFHDETTSAALLGHTKAFVEFVLAFLLSLGFQLLHQTSGRAGGSLTRHSP*
Ga0070699_1002126792	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MASDQGMKQGTAAKPTHYNRTLTIDFHDETTSAALLGHTKAFVEFVLAFLLSLGFQLLHQTSGRAGGSLTRHSP*
Ga0070697_1011744592	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LAKAATQTRHNRTITVDFHDETTYPHLLDDGNAFLEWVLAFIL*
Ga0066704_109260081	3300005557	Soil	MGQSAKAIRHNRTITVDFQDQSTYFQLLSDGKAFVEFVLAFLLA
Ga0066700_103213193	3300005559	Soil	MGPAAKPTRHNRTISVDFQDEVTYFQLLGDTKAFVEFVL
Ga0066706_115292991	3300005598	Soil	MGQAAKPTRHNRTLTIDFHDETTYAELLGNTKAFVEFVLAFILAIGCQLTHKASCSEGGS
Ga0068859_1028510791	3300005617	Switchgrass Rhizosphere	MGHAAKPPRHNRTITVDFHDETTYVALLGNTTAFVECVLAFLLALRLSAPPQGQL
Ga0066903_1041706101	3300005764	Tropical Forest Soil	MDNAAKAIRENRTITVDVQDQSTYFQLISDGKAFVEFV
Ga0081455_1000187729	3300005937	Tabebuia Heterophylla Rhizosphere	MGQTAKATRANRTITVDFHDEATYDRLLGDTKAFVECILAFLLSTG
Ga0066696_106731742	3300006032	Soil	MGPAAKPTRHNRTISVDFQDEVTYFQLLGDTKAFVEFVLAFILSLGFQLLHKASC
Ga0066652_1015641621	3300006046	Soil	MGPAAKPPRHNRTSSVDFQDEVTYFQLLGDTKAFVEFVLAFILSLGFQLLH
Ga0075422_100157913	3300006196	Populus Rhizosphere	MRQGSKRIRYNRTITIDFQDEATYFRLLDNGKAFVECVLAFLLSRVAGNRV*
Ga0066660_103171821	3300006800	Soil	MGQAAKPTRHNRTITVDFQDEATYFQLLGDTQAFVEFVLAFLLSLGF
Ga0075430_1001029725	3300006846	Populus Rhizosphere	MGQTAKVTRKNRTITVDFHNEATYDQLLDDTKAFVE
Ga0075430_1006760952	3300006846	Populus Rhizosphere	MGQTAQPTRHNRTITVDFHDETTYFTLVGNPKAFVEFVLAFLLSLGFQLLHKA
Ga0075431_1002306433	3300006847	Populus Rhizosphere	MRQTAKPTRENRTITVDFHDETTYFALLGNTKAFIE
Ga0075431_1014517592	3300006847	Populus Rhizosphere	MGPAAKPTRQNRTITVDFQDEATYFQLLGDSQAFVEFVLAFL
Ga0075420_1017578652	3300006853	Populus Rhizosphere	MRHRAKATRHNRTITVDFCDESTYFQVLSDGKAFVE
Ga0075429_1004499883	3300006880	Populus Rhizosphere	MGHTAKPTRQNRTITVDFQDETTYFQLLGDTQAFVEFVCA
Ga0075435_1009377652	3300007076	Populus Rhizosphere	MAQTTQVTRQNRTLTVDFQNPSTYFELINDGKAFVEFVFAFILSIGFQLAHK
Ga0075435_1009854741	3300007076	Populus Rhizosphere	MGHAAKPIRHNRTITVDFRDETTYFALLGDTKAFVECVLAFLLSLG
Ga0099791_102226671	3300007255	Vadose Zone Soil	MGHAAKPIRHNRTLTVDFHDEATYFGLLDHTNAFVEFVLAFLLALGFQLLHKASCSE
Ga0099791_104637703	3300007255	Vadose Zone Soil	MGQRAKPTRHTRTITVDFHDETTYAELLGNTKAFVEFV
Ga0099793_101522541	3300007258	Vadose Zone Soil	MGNAAKSTRQNRTLTVDFHDETTYFALLDNTKAFVEFLLAFLLSIG
Ga0066710_1019587903	3300009012	Grasslands Soil	MGHAAKPRRHTRTLPVDFHDEATSFGLLDNALAFVEFVLACLLARA
Ga0099828_103351041	3300009089	Vadose Zone Soil	MGQAAKPTRQNRTITVDFQDEATYFQLLGDTKAFVEFVLAFILS
Ga0099828_109258113	3300009089	Vadose Zone Soil	MAQAATLTRENRTITVDFHDETTYVGLLGNSHAFVEFVLAFLLALGFQLL
Ga0099828_113024061	3300009089	Vadose Zone Soil	MGQTAKVTRENRTLTVDFHDETTYFALLGTTKACVEFVLAFLLSIGFQLLHK
Ga0099827_111323801	3300009090	Vadose Zone Soil	MVQAVKPPRSNRTLTVDFHDETTYFALLGNTHAFVEFVLAFLL
Ga0099827_115800181	3300009090	Vadose Zone Soil	MGQSAKATRQNCTIIVDFHDESTYLQLLSDGKAFVE*
Ga0075418_101856941	3300009100	Populus Rhizosphere	MPQAAKSKRHNRTITVDFHDEATYSQLLGDGKAFIEFVLAFI
Ga0066709_1019743213	3300009137	Grasslands Soil	MGQAAKPPRQNRTLTLDFRDETTYSELLGNTKAFVEFVLAFILAIGCQLTHKASCSEGGSLTRH
Ga0066709_1023418203	3300009137	Grasslands Soil	MEQAAKPTRQNRTITVDFQDEATYFQLLGDTKAFVEFVLAFLLSLGF
Ga0066709_1043240521	3300009137	Grasslands Soil	MGQTVKATRANRTITVDCHNAATYGQLLDATKACVECVLAFLLSTGFQLLHKASCSAGGR
Ga0099792_109403911	3300009143	Vadose Zone Soil	MGQTAIPTRHNRTLTVDFHDETTYFALLDNTHAFVEFVLAFLLALGFQLLHKAS
Ga0114129_100566961	3300009147	Populus Rhizosphere	MGQSAKPTRQNRTITVDFHDETTYAELLGNTKAFVEFVLAF
Ga0114129_107886921	3300009147	Populus Rhizosphere	MGNATKATRQNRTLTVDFHDETTYCALLDNTKAFVEFVLAFILSI
Ga0114129_115626892	3300009147	Populus Rhizosphere	MGHAAKPTRQNRTLTVDFRDETTYAELLGTPKAFVEF
Ga0114129_117002281	3300009147	Populus Rhizosphere	MGQATQRIQQNRTITVDFQDEATYFQLLGDTKMCVEF
Ga0114129_131896542	3300009147	Populus Rhizosphere	MGQSAKPRRENRTITVDFHDASTYFQLIDDGKAFMEFVLAFI
Ga0114129_133319071	3300009147	Populus Rhizosphere	VGQSAKPPRQNRTITVDFQEPSTYVQLMNDGKAFV
Ga0111538_135117932	3300009156	Populus Rhizosphere	VTRTNRTITVDFHNEATYDQLRDDTKAFVEFVLAFL
Ga0075423_102585632	3300009162	Populus Rhizosphere	MEQAAKPTRHNRTITVDFQDEATYFQLLGDTQAFV*
Ga0105104_100417554	3300009168	Freshwater Sediment	MGQTTKATRENRTITVDFHDETTYSELLGNTRAFVEFVLAFLFSLSAFSSSTRLAAVRAGV*
Ga0105237_124398632	3300009545	Corn Rhizosphere	MGQTAKPIRENRTITIDFHDESTYAELLDNTKAFVEFVFAFILS
Ga0105069_10404411	3300009800	Groundwater Sand	MGHAAKPIRHNRTITVDFRDEATYFALLGTTKAFVELVLAFLLSLGFQLT
Ga0105084_10125251	3300009811	Groundwater Sand	MAQAATLTRENRTITVDFHDETTYFGLLGNPHAFVEFVLAFLLALGF
Ga0126380_118086711	3300010043	Tropical Forest Soil	MRQTAKPTRENRTITVDFHDETTYFALLGNTQAFLEFVLAFFLSIGFQLAHKAT
Ga0126384_107989301	3300010046	Tropical Forest Soil	MAQTTQVTRQNRTLTVDFQDPSTYFELIHDGKAFVEFVFAFILSLGFQLA
Ga0126384_111506743	3300010046	Tropical Forest Soil	MGQTAKPTRHNRTITVDFHDETTYFALVGNPKAFV*
Ga0126384_117148741	3300010046	Tropical Forest Soil	MGQSAKPTRQNRTITVDFQEPSTYLQLMNDGKAFVE
Ga0126382_108084722	3300010047	Tropical Forest Soil	MAQTTKVTRQNRTLTVDFQDPSTYSELIRNGKAFVEFVLA
Ga0126382_110795902	3300010047	Tropical Forest Soil	MGPLAKPTRENRIITVDFHDEMTSFALLGHTKAFVEIVLAFILSIGFQLKHQATCSARGSLTRHSP*
Ga0126382_118373031	3300010047	Tropical Forest Soil	MGHAAKSTRQNRTITVDFQDPSTYFQLINDRKAFVEFVLAFLLSL
Ga0126382_118457442	3300010047	Tropical Forest Soil	MRQTATPTRKNRTITVDFHDEATYFALLGDTKAFVEFVLAFIL
Ga0126382_118524492	3300010047	Tropical Forest Soil	MGQRAKPTRQNRTITVDFNDETTYCQLLDDTKAFVEFVFAFILSLGFQL
Ga0126373_105550381	3300010048	Tropical Forest Soil	MEQAAKSARHNRTITVDFHDEATYFQLLDDPQAFVEC
Ga0126376_111694161	3300010359	Tropical Forest Soil	MAQTTQMTRQNRTLTVDFQDPSTYFELINDGKAFVEFVFAFLLSIGFQLAHKTRFSRISW
Ga0126376_118333872	3300010359	Tropical Forest Soil	MGPTVKPTRQNRTITIDFHDESTYFQLLSDGKAFVELILAFLLSIGFQLTHKATCTSGGCLT
Ga0126372_108216081	3300010360	Tropical Forest Soil	MAQTTQVTRQNRTLTVDFQDPSTYFELINDGKAFVEFVFAFILS
Ga0126377_106968622	3300010362	Tropical Forest Soil	VGQAAKATRANCTITVDFHDEATYDRLLDDTKAFV
Ga0126377_117773752	3300010362	Tropical Forest Soil	MGHAAKPTRHNRTITVDFHDEATYFRLLGDGKVFVDLVLAFLWTLGF*
Ga0126379_117943202	3300010366	Tropical Forest Soil	VQATKATRQNRTLTIDFQDPSTYFELINDGKAFVECVLAFILSIG
Ga0134127_127083561	3300010399	Terrestrial Soil	MAQTTQVTRQNRTLTVDFQDPSTYFELINDGKEFVEFVFAFILSLGFQLAHK
Ga0105246_117895501	3300011119	Miscanthus Rhizosphere	MGHAAKSTRQNRTLTVDFHDETTYFALLDNTKAFVEFVLAFILSIGFQLHH
Ga0105246_122403922	3300011119	Miscanthus Rhizosphere	MGQTAKPIRENRTITIDFHDESTYAALLGNTKAFVEFVFAFIRVAGKIM*
Ga0137389_114680081	3300012096	Vadose Zone Soil	MGLSAKPTRQNRTITVDFQEPSTYLQLMNDGKAFVEFVFAFLLS
Ga0137383_106132391	3300012199	Vadose Zone Soil	MGQTVKATRANRTITVDFHNAATYGQLLDDTKACVE
Ga0137383_113191141	3300012199	Vadose Zone Soil	MGHATKPIRHNRTITVDFRDETTYCALLGNTTAFVEFVFAFFLTLGFQ
Ga0137365_105676191	3300012201	Vadose Zone Soil	MGQTAKVTRENRTITVNFHHEATYDQLLDHPKAFVEFVLAFLLSI
Ga0137363_103966452	3300012202	Vadose Zone Soil	MGQTAKPIRANRTITIDFHEESTYAALLGNTKALVECVFAFILSLGFQLTHKSTCSSGGC
Ga0137399_109025901	3300012203	Vadose Zone Soil	MGQAAKPIRQNRTITVDFQDETTYVQLLDDGKAFVELVLAFLLAL
Ga0137362_104659261	3300012205	Vadose Zone Soil	MGQAAKPTRQNRTITVDFQDEATYFQLLGDTQAFVEFVRAFLLS
Ga0137362_114890241	3300012205	Vadose Zone Soil	MGQAATPTRHNRTIIVDFQDEATYLQLLGDTKAFVEFVLAFLLSLGFQLLHKASCSE
Ga0137381_109343771	3300012207	Vadose Zone Soil	MGQAAKPTRHHRTLTIDFHDETTYAALLGNTTAFVEFGPACAFKQ*
Ga0137372_103502721	3300012350	Vadose Zone Soil	MGPAAKPTRQNRTITVDFQDEATYFQLLGDTTVFVEFV
Ga0137386_111797491	3300012351	Vadose Zone Soil	MGQTAKVTRKNRTITVDFHNEATYDQLLDDTKAFVEF
Ga0137368_104193423	3300012358	Vadose Zone Soil	MGKAAKRPRHNRTITVDVHDEATYFQLLDNGKAFVELVIAFILALGFQLR
Ga0137360_101393651	3300012361	Vadose Zone Soil	MGQRAKPTRDNRTITVDFHDETTCVALLGNTKALVEFVLAFHLSMGLQRTPQARGSAGGGRP
Ga0137361_102636761	3300012362	Vadose Zone Soil	MGQTAKPRRENRTITIDFHDETTYFALLGNTKAFVEFVFAFVLSIGFQL
Ga0137358_103840433	3300012582	Vadose Zone Soil	MGQRAKPTRDNRTITVDFHDETTCVALLGNTKALVEFVLAFHLSMGLQRTPQAAAARAAAGRATSMRPVSVWAL
Ga0157293_101607801	3300012898	Soil	TTRQNRTLTVDFQDSSTYFELISDGKAFVEFVLTFILSIGFQLAHKATCRGGGCF*
Ga0137419_100930363	3300012925	Vadose Zone Soil	MGQTAKPIRADRTITIDFHDETTYFALLGNTKAFVEFVFAFVLSIGFQLTHKP
Ga0137404_101092212	3300012929	Vadose Zone Soil	MGKAAKRPRHNRTITVDFHDEATYFQLLDDGKALVELVLAFI*
Ga0137404_111260951	3300012929	Vadose Zone Soil	MGQTAKPTRENRTIIVDFHDETTYFTLLGNTKGFVEFVLAFLLSLSFQLQHKATCH
Ga0137407_107304313	3300012930	Vadose Zone Soil	MGQTAKPPRQNRTLTVDFHNETTYFALLGHTKAFIECVLAFILS
Ga0137407_111494741	3300012930	Vadose Zone Soil	MGQTAKPTRHNRTSTVACHDETTSCALLDNPQAVVEFVLAFLL
Ga0137407_114118831	3300012930	Vadose Zone Soil	MGQTATVTRKNRTITVDFHHEATYDQLLDDTKAFVEFVLAWLLALGFQLLPKARC
Ga0126375_105920072	3300012948	Tropical Forest Soil	MGQTATPTRQNRTITVDFHDETTYFELLSNTKAFVEFVLAFVLSLGFQLLQRAAAARAGA
Ga0126375_114535762	3300012948	Tropical Forest Soil	MRQTATPTRKNRTITVDFHDEATYFALLGDTKAFVEFVL
Ga0126369_105734352	3300012971	Tropical Forest Soil	VTRQNRTLTVDFKDPSTYFELINDGKAFVEFVFAFLLSIGFQLAHKTRFSRISW*
Ga0126369_133752571	3300012971	Tropical Forest Soil	MAKTANRIRKNRTLTVDFQDESTYFQLMDNGKAFVEFVLAFILALGFQLT
Ga0134087_100403381	3300012977	Grasslands Soil	MGPAAKPTRHNRTISVDFQDEATYFQLLGDTKAFVEFVLAFILSLGFQLLHTQN*
Ga0163162_101133645	3300013306	Switchgrass Rhizosphere	MAQTTKTTRQNRIITVDFQDPSTYFQLISDGKAFAEFVLAFILSLGFQLTHKATCTSGGSL*
Ga0163162_105140351	3300013306	Switchgrass Rhizosphere	MILTAKPTRENRTITVDFHDETTYFALLGNTQAFIEFVLAFLLSIGFQL
Ga0075313_10122411	3300014267	Natural And Restored Wetlands	MGQAAKATRQNRTITVDFQDESTYFQLIHDGKALVEFVLAFI
Ga0075309_11841892	3300014268	Natural And Restored Wetlands	MGQTAKAPRENRTITVDFQDDSTYFELIHDGKAFVEFVL
Ga0182000_103039761	3300014487	Soil	MGRTTKAIRENRAITVDFHDETTYSELLGNTKAFVEFVLAF
Ga0137420_13555911	3300015054	Vadose Zone Soil	MGQAAKPTRHNRTLTIDFHDETTYAALLGNTKAFVEFVLAFLLALGFQ
Ga0137418_110971731	3300015241	Vadose Zone Soil	MGQAAKPTRHNRTLTIDFHDETTYAALLGNTKAFVEFVLAFLLALGFQLLHKASCSEGGSLTRHS
Ga0137409_105940601	3300015245	Vadose Zone Soil	MGNATKAPGDNRTMTVDFQDESTYVPLPSDGKAFVEFVVALLLALGFQL
Ga0132258_120469241	3300015371	Arabidopsis Rhizosphere	MVQAAKSTRAIRTLTVDVNDETFFFALLGNTHAFVE
Ga0132258_139285282	3300015371	Arabidopsis Rhizosphere	MGRAVKPTRHNRTITVDFHDETTYAALLGNTTAFVEFVLAFILSL*
Ga0132255_1042307492	3300015374	Arabidopsis Rhizosphere	MGRAVKPTRHNRTITVDFHDETTYAALLGNTTALVEFVLAFILCL*
Ga0182032_117995022	3300016357	Soil	MRQTATPTRKNRTITIDFHDEATYFALLGDTKAFVEFVLAFILSIGFQLAHKTTC
Ga0182039_115820072	3300016422	Soil	MRQTATPTRKNRTITIDFHDEATYFALLGDTKAFVEFVLAFILSIGFQLAHKTT
Ga0187785_105882092	3300017947	Tropical Peatland	MSSRQIPIRHNRTIYVDFKDEANYSKLIGSSKAFVEFV
Ga0184626_102511201	3300018053	Groundwater Sediment	MGQAAKPTRQNRTITVDFQDEATYFQLLGDTKAFVEFVLAFILSLGFQ
Ga0184609_100936543	3300018076	Groundwater Sediment	MGHTAKPTRENRTITVDCHDETTYFALVGHTKAFVEFVLAFILSIGLQLNHKTPCWRLSS
Ga0184609_103583671	3300018076	Groundwater Sediment	MGHAAKPPRHNRTITVDFHDETTYFALLGNPNAFVEF
Ga0184639_102616151	3300018082	Groundwater Sediment	MAQAAKPTRHNRTITVDFHNEATYFALLSDGKAFIEFVLAFFL
Ga0066655_111661152	3300018431	Grasslands Soil	MGQSAKPTRQNRTITVDFHDETTYSELLGNTKAFVEFVLAFILSLGFQLIHKAS
Ga0066667_118414521	3300018433	Grasslands Soil	MGPAAKPTRHNRTISVDFQDEVTYFQLLGDTKAFVEFVLAFIL
Ga0190268_119060491	3300018466	Soil	MAQTTKATRQNRTLTVDFQDPSTYFELIRNGQAFVE
Ga0066662_105140721	3300018468	Grasslands Soil	MGPTAKPIRQNRTITVNSHDESTYFQLLRDGKAFVELILAFMLLIGFQLTHK
Ga0173482_100714331	3300019361	Soil	MAQTTKTTRQNRTLTVDFQASSTYFELISDGKAFVEFVLAFVLSLG
Ga0190264_116652261	3300019377	Soil	MGNGAKTTRQNRTITVNFQDPSTYFQLISDGKAFVEFVLAFILSLGFQRHHQASSTATAL
Ga0137408_12463181	3300019789	Vadose Zone Soil	MGQFAKPTRENRTITVDFHDETTYFALVGNTKAFVEFVLAFILSIGFQSSST
Ga0179594_102791841	3300020170	Vadose Zone Soil	MGQLAKPTRENRTVTVDFHDETTYFELLGNTKAFVEFVLAFILSIGFQLKHKATCSG
Ga0210379_104408051	3300021081	Groundwater Sediment	MVQAVKPPRANRTLTVDFHDETTYFALLGNTHAFVEF
Ga0137417_13915972	3300024330	Vadose Zone Soil	MGQTAKPIRENRTITIDFHDETTYFALLGNTKAFVEFVFAFVLSIGFQLTHKPTL
Ga0207688_110591621	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MRQTAKAPRQNRTITVNFHDPSTYFQLISDGKAFVEFVLAFILSLGFQLTHKATCTSGGS
Ga0207693_101445152	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MAQTTKATRQNRTITVDFQDPSTYFQLISDGKAFVEFVQQQLDVFE
Ga0207693_111347812	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MGQAAKPTRHNRTLTIDFQDETTYAELLGNTKAFVEFVLAFLLALGFQLLHKASCSEG
Ga0207691_109339392	3300025940	Miscanthus Rhizosphere	MAQDAKPTRHNRTITVDCHNEATFFALLSDGKAFIEFVLAFFLAL
Ga0207712_103393401	3300025961	Switchgrass Rhizosphere	MRQTAKPTRENRTITVDFHDETTYFALLGNTQAFIEFV
Ga0207712_103426711	3300025961	Switchgrass Rhizosphere	LATAAAQTRYNRTITIDFHDETTYAHLLNDGKAFLDYGLAFILSIGLQLI
Ga0207708_113037741	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MGQTAKPIRENRTITIDFHDESTYAELLGNTKAFVEFVFAFIRVAGKIM
Ga0207674_113725501	3300026116	Corn Rhizosphere	MGPTTKPTRQNRTITVDFHDESTYFQLLSDGKAFVELIL
Ga0209265_11790792	3300026308	Soil	MAQTTKATRQNRTLTVDFQDPSTYFELIRNGQAFVEFVLAFILSIGFQLAH
Ga0257165_10891551	3300026507	Soil	MGQRAKPTRDNRTITVDFHDETTCVALLGNTKALVEFVLAFHLSMGLQRTPQAAAARAAAGRATSMR
Ga0209899_11093451	3300027490	Groundwater Sand	MGQTAKVTRENRTITVNFHNEATYDQLLDNTKAFVEFVLAFLLSIGFQLLHKTSCS
Ga0209076_10775541	3300027643	Vadose Zone Soil	MGQTAKPIRADRTITIDFHDETTYFALLGNTKAFVEFVFAFVL
Ga0209076_11872141	3300027643	Vadose Zone Soil	MGQRAKPTRDNRTITVDFHDETTCVALLGNTKALVEFVLAFHLSMGLQRTPQAAA
Ga0209180_103212712	3300027846	Vadose Zone Soil	MGQTAKVTRKNRTITVDFHNEATYDQLLDNTKAFVEFVLAFLLALGFQLLHK
Ga0209481_102781542	3300027880	Populus Rhizosphere	MGQTTKAPRENRTITVDFHNESTYFQLLDDGPALVEFVLAFILA
Ga0209590_106894831	3300027882	Vadose Zone Soil	MGHAAKPIRHNRTLTVDFHDEATYFGLLDNTNTFVEFVLAFLLALGF
Ga0209488_102027391	3300027903	Vadose Zone Soil	MAHTAKPTRENRTMTVDFHDAATYCALLSDGKAFVEFVLAVILSLGLQLTHKST
Ga0307504_102288001	3300028792	Soil	MGQTAKVTRVNRTITIDFHDETTSFALLGNTKAFVEFVFAFVLSIGFQLTHKPM
Ga0299914_114949281	3300031228	Soil	MGQTAKAPRQNRTLTVDFQDPSTYFELLSNGKAFVEFVLAFILSIGFQLTHKATCTGGG
Ga0308194_101451842	3300031421	Soil	MGQTAKPRRENRTITIDFRDETTYFALLGNTKAFVEFVFAFVLSIGFQHTHKPTCSGGGCLTR
Ga0307468_1002088892	3300031740	Hardwood Forest Soil	MGQTATPTRHNRTITVDFHDETTYFVLVANPKAFVEFVLAFLLSIGF
Ga0310904_105388611	3300031854	Soil	MGQTAKPTRHNRTITVDFHDETTYFALVGNPKAFVAFVLAFLLSLGFPLLHKASC
Ga0310892_106032203	3300031858	Soil	MGQTVKPTRQNRTITVDFHDETTYAELLGNTTAFLEVVFAFLLAIGFQLTHQA
Ga0307416_1016074382	3300032002	Rhizosphere	MEHAAKPIRHNRTITVNFRDEATYFALLGTTKAFVEFVLA
Ga0307472_1015772741	3300032205	Hardwood Forest Soil	ITVDFQDETTYFRLLDDGKVFVEFVLAFLLSLGLSTQT
Ga0364925_0260210_219_368	3300034147	Sediment	MAQAAKLTRENRTITVDFHDETTYFALVGNTKAFVEFVLAFGRVPTRCG

Hidden Markov Model


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