NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F038255

Metagenome / Metatranscriptome Family F038255

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F038255
Family Type Metagenome / Metatranscriptome
Number of Sequences 166
Average Sequence Length 54 residues
Representative Sequence VFAPMTIVSMAACTTAFAWVLTRPVIEPVYRAVLIPALGLFGMMFGLWYVGLG
Number of Associated Samples 138
Number of Associated Scaffolds 166

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.82 %
% of genes near scaffold ends (potentially truncated) 92.17 %
% of genes from short scaffolds (< 2000 bps) 93.98 %
Associated GOLD sequencing projects 135
AlphaFold2 3D model prediction Yes
3D model pTM-score0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (86.747 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(25.301 % of family members)
Environment Ontology (ENVO) Unclassified
(31.325 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.602 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 54.32%    β-sheet: 0.00%    Coil/Unstructured: 45.68%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.54
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 166 Family Scaffolds
PF00507Oxidored_q4 5.42
PF00248Aldo_ket_red 4.22
PF013675_3_exonuc 4.22
PF09335SNARE_assoc 3.61
PF01987AIM24 2.41
PF12680SnoaL_2 1.81
PF01058Oxidored_q6 1.20
PF027395_3_exonuc_N 1.20
PF00561Abhydrolase_1 0.60
PF01925TauE 0.60
PF07503zf-HYPF 0.60
PF00196GerE 0.60
PF02770Acyl-CoA_dh_M 0.60
PF01924HypD 0.60
PF00282Pyridoxal_deC 0.60
PF00903Glyoxalase 0.60
PF04542Sigma70_r2 0.60
PF02397Bac_transf 0.60
PF01556DnaJ_C 0.60
PF01300Sua5_yciO_yrdC 0.60
PF13581HATPase_c_2 0.60
PF03965Penicillinase_R 0.60
PF10099RskA 0.60
PF03741TerC 0.60
PF01204Trehalase 0.60
PF13531SBP_bac_11 0.60
PF00329Complex1_30kDa 0.60
PF07366SnoaL 0.60
PF07732Cu-oxidase_3 0.60
PF01039Carboxyl_trans 0.60
PF03734YkuD 0.60

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 166 Family Scaffolds
COG02585'-3' exonuclease Xni/ExoIX (flap endonuclease)Replication, recombination and repair [L] 5.42
COG0838NADH:ubiquinone oxidoreductase subunit 3 (chain A)Energy production and conversion [C] 5.42
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 3.61
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 3.61
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 3.61
COG2013AIM24 protein, required for mitochondrial respirationEnergy production and conversion [C] 2.41
COG0377NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductaseEnergy production and conversion [C] 1.20
COG1740Ni,Fe-hydrogenase I small subunitEnergy production and conversion [C] 1.20
COG1941Coenzyme F420-reducing hydrogenase, gamma subunitEnergy production and conversion [C] 1.20
COG3260Ni,Fe-hydrogenase III small subunitEnergy production and conversion [C] 1.20
COG0068Hydrogenase maturation factor HypF (carbamoyltransferase)Posttranslational modification, protein turnover, chaperones [O] 0.60
COG0076Glutamate or tyrosine decarboxylase or a related PLP-dependent proteinAmino acid transport and metabolism [E] 0.60
COG0409Hydrogenase maturation factor HypDPosttranslational modification, protein turnover, chaperones [O] 0.60
COG0484DnaJ-class molecular chaperone with C-terminal Zn finger domainPosttranslational modification, protein turnover, chaperones [O] 0.60
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.60
COG0730Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 familyInorganic ion transport and metabolism [P] 0.60
COG0777Acetyl-CoA carboxylase beta subunitLipid transport and metabolism [I] 0.60
COG0825Acetyl-CoA carboxylase alpha subunitLipid transport and metabolism [I] 0.60
COG0852NADH:ubiquinone oxidoreductase 27 kD subunit (chain C)Energy production and conversion [C] 0.60
COG0861Tellurite resistance membrane protein TerCInorganic ion transport and metabolism [P] 0.60
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.60
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 0.60
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.60
COG1626Neutral trehalaseCarbohydrate transport and metabolism [G] 0.60
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.60
COG1960Acyl-CoA dehydrogenase related to the alkylation response protein AidBLipid transport and metabolism [I] 0.60
COG2132Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)Cell cycle control, cell division, chromosome partitioning [D] 0.60
COG2148Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)Cell wall/membrane/envelope biogenesis [M] 0.60
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 0.60
COG3262Ni,Fe-hydrogenase III component GEnergy production and conversion [C] 0.60
COG3682Transcriptional regulator, CopY/TcrY familyTranscription [K] 0.60
COG4799Acetyl-CoA carboxylase, carboxyltransferase componentLipid transport and metabolism [I] 0.60
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.60


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms86.75 %
UnclassifiedrootN/A13.25 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908044|A5_c1_ConsensusfromContig948All Organisms → cellular organisms → Bacteria1577Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c1901975All Organisms → cellular organisms → Bacteria → Terrabacteria group632Open in IMG/M
3300000033|ICChiseqgaiiDRAFT_c1985613Not Available625Open in IMG/M
3300000858|JGI10213J12805_10199469Not Available620Open in IMG/M
3300000955|JGI1027J12803_100888022All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter minatonensis1829Open in IMG/M
3300002025|smpD1_1114173All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300002568|C688J35102_117943544All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales517Open in IMG/M
3300002568|C688J35102_118979774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria621Open in IMG/M
3300003990|Ga0055455_10211444All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria608Open in IMG/M
3300003997|Ga0055466_10137630All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales691Open in IMG/M
3300004081|Ga0063454_101267465All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300004081|Ga0063454_101940039All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia519Open in IMG/M
3300004153|Ga0063455_100836310All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300004156|Ga0062589_101512911Not Available660Open in IMG/M
3300004157|Ga0062590_101628125All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria654Open in IMG/M
3300005166|Ga0066674_10325212All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria722Open in IMG/M
3300005338|Ga0068868_100924792All Organisms → cellular organisms → Bacteria794Open in IMG/M
3300005340|Ga0070689_101409223All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300005343|Ga0070687_101155781All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300005347|Ga0070668_101235582All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales678Open in IMG/M
3300005356|Ga0070674_101602907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria587Open in IMG/M
3300005434|Ga0070709_11429272Not Available560Open in IMG/M
3300005440|Ga0070705_101756617All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria525Open in IMG/M
3300005444|Ga0070694_101258979All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria621Open in IMG/M
3300005459|Ga0068867_101379020Not Available653Open in IMG/M
3300005546|Ga0070696_101045167All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria684Open in IMG/M
3300005549|Ga0070704_100919151All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia788Open in IMG/M
3300005844|Ga0068862_102299169Not Available551Open in IMG/M
3300005937|Ga0081455_10534661All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria779Open in IMG/M
3300006038|Ga0075365_10713761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales708Open in IMG/M
3300006048|Ga0075363_100335408All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia881Open in IMG/M
3300006051|Ga0075364_10178034All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1438Open in IMG/M
3300006358|Ga0068871_101195594All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales713Open in IMG/M
3300006573|Ga0074055_11733431All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales945Open in IMG/M
3300006605|Ga0074057_11839103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales505Open in IMG/M
3300006844|Ga0075428_100079393All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album3582Open in IMG/M
3300006844|Ga0075428_101063223All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia855Open in IMG/M
3300006844|Ga0075428_101814379All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales635Open in IMG/M
3300006845|Ga0075421_101415436All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales764Open in IMG/M
3300006846|Ga0075430_101436288All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria567Open in IMG/M
3300006847|Ga0075431_100558288All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1132Open in IMG/M
3300006847|Ga0075431_101937062All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales545Open in IMG/M
3300006852|Ga0075433_11529401Not Available576Open in IMG/M
3300006853|Ga0075420_101701238All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria540Open in IMG/M
3300006876|Ga0079217_10311452All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album879Open in IMG/M
3300006880|Ga0075429_100904128All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia772Open in IMG/M
3300006903|Ga0075426_10872904All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria678Open in IMG/M
3300006918|Ga0079216_10290981All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales960Open in IMG/M
3300006918|Ga0079216_11015492All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300007076|Ga0075435_100970884All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria742Open in IMG/M
3300007076|Ga0075435_101507371All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia590Open in IMG/M
3300009012|Ga0066710_100895293Not Available1365Open in IMG/M
3300009094|Ga0111539_10075005All Organisms → cellular organisms → Bacteria3985Open in IMG/M
3300009100|Ga0075418_12460530All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria568Open in IMG/M
3300009137|Ga0066709_103535219All Organisms → cellular organisms → Bacteria567Open in IMG/M
3300009148|Ga0105243_10718667All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales976Open in IMG/M
3300009156|Ga0111538_10815514All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album1182Open in IMG/M
3300009162|Ga0075423_10058405All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album3987Open in IMG/M
3300009162|Ga0075423_13019913All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300009176|Ga0105242_11702185Not Available667Open in IMG/M
3300009840|Ga0126313_11520601All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300010037|Ga0126304_10199000All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium1310Open in IMG/M
3300010038|Ga0126315_10095849All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1695Open in IMG/M
3300010039|Ga0126309_10055439All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album1911Open in IMG/M
3300010041|Ga0126312_10000352All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia26052Open in IMG/M
3300010041|Ga0126312_10043616All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2999Open in IMG/M
3300010041|Ga0126312_10733821All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria714Open in IMG/M
3300010042|Ga0126314_11005161All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300010044|Ga0126310_10360178All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album1023Open in IMG/M
3300010044|Ga0126310_11429582All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300010045|Ga0126311_10461818All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium987Open in IMG/M
3300010166|Ga0126306_10986773All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium686Open in IMG/M
3300011119|Ga0105246_10782930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia844Open in IMG/M
3300011998|Ga0120114_1094147All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium577Open in IMG/M
3300012015|Ga0120187_1032991All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300012042|Ga0136627_1075144All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium1176Open in IMG/M
3300012045|Ga0136623_10029475All Organisms → cellular organisms → Bacteria2366Open in IMG/M
3300012092|Ga0136621_1318255All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300012092|Ga0136621_1405880All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300012093|Ga0136632_10043011All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales2072Open in IMG/M
3300012094|Ga0136638_10410149All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300012184|Ga0136610_1039690All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1717Open in IMG/M
3300012186|Ga0136620_10117341Not Available1216Open in IMG/M
3300012187|Ga0136622_10357729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi612Open in IMG/M
3300012529|Ga0136630_1058847All Organisms → cellular organisms → Bacteria1440Open in IMG/M
3300012680|Ga0136612_10692047All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300012684|Ga0136614_10376704All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1041Open in IMG/M
3300012905|Ga0157296_10044834All Organisms → cellular organisms → Bacteria1013Open in IMG/M
3300012908|Ga0157286_10233475All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium639Open in IMG/M
3300012909|Ga0157290_10354320All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria559Open in IMG/M
3300012957|Ga0164303_11043943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia585Open in IMG/M
3300012986|Ga0164304_11001119All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium662Open in IMG/M
3300015077|Ga0173483_10942719All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria512Open in IMG/M
3300015201|Ga0173478_10315237All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia715Open in IMG/M
3300015374|Ga0132255_104642511All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia582Open in IMG/M
3300018061|Ga0184619_10399671All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria621Open in IMG/M
3300018066|Ga0184617_1278052All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria504Open in IMG/M
3300018422|Ga0190265_12067085All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia674Open in IMG/M
3300018429|Ga0190272_10019397All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3510Open in IMG/M
3300018429|Ga0190272_12992534All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium523Open in IMG/M
3300018432|Ga0190275_12142800All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300018469|Ga0190270_10243977All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album1557Open in IMG/M
3300018469|Ga0190270_13230469All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300018476|Ga0190274_11727832Not Available720Open in IMG/M
3300018481|Ga0190271_10260872All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1772Open in IMG/M
3300018481|Ga0190271_13782595All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300019767|Ga0190267_10894546All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria606Open in IMG/M
3300021080|Ga0210382_10505901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales535Open in IMG/M
3300024430|Ga0196962_10047289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter1299Open in IMG/M
3300025927|Ga0207687_11813260Not Available522Open in IMG/M
3300025932|Ga0207690_10307129All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album1243Open in IMG/M
3300025938|Ga0207704_10988679All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria711Open in IMG/M
3300025938|Ga0207704_11964133Not Available503Open in IMG/M
3300026088|Ga0207641_12569498Not Available507Open in IMG/M
3300026121|Ga0207683_11364112All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium656Open in IMG/M
3300026878|Ga0208891_1004459Not Available571Open in IMG/M
3300027618|Ga0208736_1147165All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300027907|Ga0207428_10331022All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1123Open in IMG/M
3300027907|Ga0207428_10801015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708669Open in IMG/M
3300028379|Ga0268266_11044417Not Available791Open in IMG/M
3300028380|Ga0268265_10607559All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1046Open in IMG/M
3300028587|Ga0247828_10337959All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales845Open in IMG/M
3300028587|Ga0247828_10804047All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria597Open in IMG/M
3300028589|Ga0247818_11425925All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia500Open in IMG/M
3300028704|Ga0307321_1051005Not Available785Open in IMG/M
3300028716|Ga0307311_10075708All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales920Open in IMG/M
3300028716|Ga0307311_10206314All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria577Open in IMG/M
3300028754|Ga0307297_10230780All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria654Open in IMG/M
3300028755|Ga0307316_10018004All Organisms → cellular organisms → Bacteria2237Open in IMG/M
3300028755|Ga0307316_10195548All Organisms → cellular organisms → Bacteria728Open in IMG/M
3300028771|Ga0307320_10470843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia507Open in IMG/M
3300028778|Ga0307288_10175977All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria816Open in IMG/M
3300028787|Ga0307323_10381193All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9505Open in IMG/M
3300028796|Ga0307287_10351547All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria556Open in IMG/M
3300028807|Ga0307305_10167158All Organisms → cellular organisms → Bacteria1015Open in IMG/M
3300028809|Ga0247824_10964134All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria537Open in IMG/M
3300028814|Ga0307302_10372735All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria705Open in IMG/M
3300028814|Ga0307302_10543306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria577Open in IMG/M
3300028819|Ga0307296_10743324All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300028819|Ga0307296_10818350All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9508Open in IMG/M
3300028828|Ga0307312_10453379All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9845Open in IMG/M
3300028872|Ga0307314_10201403All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria599Open in IMG/M
3300028876|Ga0307286_10205863All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria715Open in IMG/M
3300028880|Ga0307300_10301986All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria542Open in IMG/M
3300028881|Ga0307277_10434898All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales588Open in IMG/M
3300028884|Ga0307308_10233317All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium882Open in IMG/M
3300028889|Ga0247827_11154554All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium535Open in IMG/M
3300030336|Ga0247826_10247076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1250Open in IMG/M
3300030336|Ga0247826_10646410All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria816Open in IMG/M
3300030336|Ga0247826_11096907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales635Open in IMG/M
3300030336|Ga0247826_11358399Not Available573Open in IMG/M
3300030336|Ga0247826_11603146All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300030988|Ga0308183_1134781Not Available595Open in IMG/M
3300031152|Ga0307501_10079668Not Available792Open in IMG/M
3300031229|Ga0299913_11000536All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300031450|Ga0272433_10193296All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1132Open in IMG/M
3300031548|Ga0307408_101544260All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria629Open in IMG/M
3300031824|Ga0307413_10422282All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter1050Open in IMG/M
3300031852|Ga0307410_10334567All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → Thermoleophilum → Thermoleophilum album1205Open in IMG/M
3300032004|Ga0307414_12043809All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria535Open in IMG/M
3300032080|Ga0326721_10683471All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria633Open in IMG/M
3300033550|Ga0247829_10747502Not Available814Open in IMG/M
3300034151|Ga0364935_0157129All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria721Open in IMG/M
3300034818|Ga0373950_0065563All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria736Open in IMG/M
3300034819|Ga0373958_0050322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria878Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil25.30%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere12.05%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand7.23%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil7.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil6.63%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.01%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil3.01%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.01%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.41%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.41%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.81%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.81%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.20%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.20%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.20%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.20%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil1.20%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.20%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.60%
Polar DesertEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert0.60%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial0.60%
Permafrost And Active Layer SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost And Active Layer Soil0.60%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.60%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.60%
RockEnvironmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock0.60%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.60%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.60%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.60%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.60%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.60%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908044Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5EnvironmentalOpen in IMG/M
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000858Soil microbial communities from Great Prairies - Wisconsin Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002025Permafrost and active layer soil microbial communities from McGill Arctic Research Station (MARS), Canada, for enrichment studies - Sample_D1EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003990Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2EnvironmentalOpen in IMG/M
3300003997Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006048Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3Host-AssociatedOpen in IMG/M
3300006051Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006573Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006605Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006918Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100EnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011998Permafrost microbial communities from Nunavut, Canada - A30_35cm_6MEnvironmentalOpen in IMG/M
3300012015Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep1EnvironmentalOpen in IMG/M
3300012042Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ489 (22.06)EnvironmentalOpen in IMG/M
3300012045Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)EnvironmentalOpen in IMG/M
3300012092Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ445A (23.06)EnvironmentalOpen in IMG/M
3300012093Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)EnvironmentalOpen in IMG/M
3300012094Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ858 (22.06)EnvironmentalOpen in IMG/M
3300012184Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ134 (22.06)EnvironmentalOpen in IMG/M
3300012186Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)EnvironmentalOpen in IMG/M
3300012187Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ448 (21.06)EnvironmentalOpen in IMG/M
3300012529Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ568 (21.06)EnvironmentalOpen in IMG/M
3300012680Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)EnvironmentalOpen in IMG/M
3300012684Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)EnvironmentalOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300012908Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1EnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300024430Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026878Soil and rhizosphere microbial communities from Laval, Canada - mgHPC (SPAdes)EnvironmentalOpen in IMG/M
3300027618Polar desert microbial communities from Antarctic Dry Valleys - UQ255 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028704Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379EnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028754Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028880Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300030988Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031450Rock endolithic microbial communities from Victoria Land, Antarctica - University Valley sudEnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300032004Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3Host-AssociatedOpen in IMG/M
3300032080Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300034151Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17EnvironmentalOpen in IMG/M
3300034818Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3Host-AssociatedOpen in IMG/M
3300034819Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
A5_c1_017760902124908044SoilAALAVFAPMSALSMTLCTTAFAWLLTRKLIDPLYRNVLIPAFGLFGLMFGVWYIGLG
ICChiseqgaiiDRAFT_190197513300000033SoilIVSMAACTTAFAWVLXRXXXIEPIYRAVLIPALGLFGMMFGLWYVGLG*
ICChiseqgaiiDRAFT_198561313300000033SoilVSMTLCTTALAWLLTRRLIDPLYRTVLVPVFGVFGLFFGAWYVGIG*
JGI10213J12805_1019946923300000858SoilPMSILSMALLTGAFAWVLTRPVIEPLYRGVGIPALGMFGVMFGLWYAGLT*
JGI1027J12803_10088802213300000955SoilLCLAVFAPMSMLSMTACTAGFAWVLTRPAIEPIYRTVLVPGLGVFGVMFGLWYAGLPV*
smpD1_111417333300002025Permafrost And Active Layer SoilLAVFAPMSAVSMTLCTTAFAWLLTRRLIDPLYRNVLIPAFGLFGLMFGVWYIGLG*
C688J35102_11794354423300002568SoilAVFAPMSIVSMAALTATFAWLLTRPIVEPVYRTVLIPVLGAFGMLFGLWYAGV*
C688J35102_11897977413300002568SoilAPMTMVSMALCTTAFAWVLTRPALQPLYRTVLIPALGVFGTMFGLWYVSL*
Ga0055455_1021144423300003990Natural And Restored WetlandsLEAAAALAVFAPMTLVSMAGFTFVLAWVLTRPGIEPVYRAAVIPLLGAFGVLFGLWYAGIS*
Ga0055466_1013763023300003997Natural And Restored WetlandsFAPMSIASMAALTAAFAWILTRPIIEPVYRSVLIPALGLFGVMFGAWYMS*
Ga0063454_10126746513300004081SoilAVFAPMSLVSMALCTTAFAWLLTRPLIQPLYRTVLIPGFGLFGLTFGLWYAGLA*
Ga0063454_10194003923300004081SoilSMALCTTAFAWLLTRPVIQPLYRTVLIPAFGLFGLTFGLWYAGLA*
Ga0063455_10083631023300004153SoilLEAALALAVFAPMSIFSMALCTTAFAWILTRRVVEPVYRAVLIPAIGTFGLFFGLWYTGIT*
Ga0062589_10151291123300004156SoilLAVFAPTSAVSMTLCTTAFAWLLTRRLIDPLYRTVLIPAFGLFGLLFGAWYVGIG*
Ga0062590_10162812523300004157SoilLFAPMTVLSMIGCTSAFAWVLTRPLIEPIYRRVLIPVLGLFALAFGTWYAGIG*
Ga0066674_1032521223300005166SoilEAGLALAVFAPMTIVSMAACTTAFAWVLTRRWVEPVYRTVLIPVLGLFGLMFGLWYVGIG
Ga0068868_10092479213300005338Miscanthus RhizospherePTPLAACAALAVFAPMSAVSMALCTSGFAWTLTRPAVMPVYRTVLMPALGAVGLLFGIWYIGVG*
Ga0070689_10140922323300005340Switchgrass RhizosphereLLFAPMTALSMTLCTTAFAWVLTRRLVAPVYRTVLIPAFGLFGLVFGAWYAGLG*
Ga0070687_10115578113300005343Switchgrass RhizosphereFAPMTAVSMTICTTAFAWVLTRRLVAPVYRTVLIPAFGLFGLVFGAWYAGLG*
Ga0070668_10123558213300005347Switchgrass RhizosphereVFAPMSVVSMAACTSAFAWALTRPAVAPLYRVALMPAMGVFGLAFGLWYVGLA*
Ga0070674_10160290713300005356Miscanthus RhizosphereMAACTAAFAWVLTRPIIEPVYRTVLIPALGAFGLMFGLWYSGLA*
Ga0070709_1142927213300005434Corn, Switchgrass And Miscanthus RhizosphereMTAVSMTICTTAFAWVLTRRLVAPVYRTVLIPAFGLFGLVFGAWYAGLG*
Ga0070705_10175661723300005440Corn, Switchgrass And Miscanthus RhizosphereLALAVFAPMTIVSMAACTTAFAWVLTRRVVAPVYRTALIPALGLFGLMFGLWYVGLG*
Ga0070694_10125897913300005444Corn, Switchgrass And Miscanthus RhizosphereIFAPMTIVSMAACTTAFAWVLTRRLVEPVYRTALIPALGLFGLMFGLWYVGLG*
Ga0068867_10137902013300005459Miscanthus RhizospherePTPLAACAALAVFAPMSAVSMALCTSGFAWTLTRPAVIPVYRTVLMPALGAMGLLFGIWYIGLG*
Ga0070696_10104516723300005546Corn, Switchgrass And Miscanthus RhizosphereGLALAIFAPMTIVSMAACTTAFAWVLTRRLVEPVYRTALIPALGLFGFMFGLWYVGLG*
Ga0070704_10091915113300005549Corn, Switchgrass And Miscanthus RhizosphereSMAACTTAFAWVLTRRVVAPVYRTALIPALGLFGLMFGLWYVGLG*
Ga0068862_10229916913300005844Switchgrass RhizosphereMICTTAFAWVLTRRLVAPVYRTVLIPAFGLFGLVFGAWYAGLG*
Ga0081455_1053466113300005937Tabebuia Heterophylla RhizosphereAALAVFAPMSAVSMTLCTAGFAWLLTRRLIDPIYRTVLIPAFGIFGLLFGAWYVGIG*
Ga0075365_1071376123300006038Populus EndosphereALGLAVFAPMTVLSMAACTTAFAWVLTRPLVEPVYRTVVIPVMGLFGLTFGLWYVGLA*
Ga0075363_10033540833300006048Populus EndosphereEAAAALAVFAPMSIVSMAALTATFAWVLTRPLIEPVYRTVLIPSLGAFGVLFGVWYAGIG
Ga0075364_1017803413300006051Populus EndosphereALAVFAPMSILSMSALTAAFAWLFTRPVVAPVYRAVLIPLIGVFGLLFGLWYAGVVV*
Ga0068871_10119559423300006358Miscanthus RhizosphereKIEAAAALAVFAPMSAVSMTLCTTAFAWLLTRRLIDPLYRTVLIPGFGVFGLLFGAWYVGIG*
Ga0074055_1173343113300006573SoilAALAVFAPMSALSMTLCTTAFAWLLTRRLIDPLYRTVLIPGFGVFGLLFGAWYVGIG*
Ga0074057_1183910313300006605SoilEAAAALAVFAPMSAVSMTLCTAAFAWLLTHRLIDPLYRTVLIPAFGIFGLLFGAWYIGIG
Ga0075428_10007939373300006844Populus RhizosphereLALAVFAPMSVVSMAACTAAFAWILTRPLIEPVYRSVLIPALGLFGVLFGLSYAGLA*
Ga0075428_10106322313300006844Populus RhizosphereMSIVSMTACTAGFAWVLTRPVVEPVYRTVLIPGLGVFGVMFGLWYAGLGV*
Ga0075428_10181437923300006844Populus RhizosphereAVFAPMSVLSMAMCTSAFAWALTRPAVAPVYRVALMPVMGVFGLAFGLWYVGLT*
Ga0075421_10141543623300006845Populus RhizosphereMSIVSMAALTAGFAWILTRPLIEPIYRTVLIPSLGAFGVLFGVWYAGIG*
Ga0075430_10143628833300006846Populus RhizosphereLAVFAPMSIASMAALTAAFAWVLTRPLVEPVYRAVLIPVLGSFGLMFGLWYSGIA*
Ga0075431_10055828813300006847Populus RhizosphereIVSMAACTTAFAWVLTRPIVEPLYRAALIPALGAFGLLFGLWYAGLA*
Ga0075431_10193706213300006847Populus RhizosphereVEAAAALAVFAPMSILSMALFTSAFAWVLTRPVVAPLYRTVLVPALGAFGLVFGLWYAGIT*
Ga0075433_1152940113300006852Populus RhizosphereALCTSAFAWVLTRRVVDPIYRSVLIPAFGLFGLMFGVWYVGLG*
Ga0075420_10170123813300006853Populus RhizosphereSVISMAACTAAFAWVLTRPIVEPVYRTVLIPALGLFALTFGAWYAGLT*
Ga0079217_1031145233300006876Agricultural SoilASMAACTAAFAWVLTRPIIEPVYRTVLIPGLGLFGVMFGLWYAGLA*
Ga0075429_10090412813300006880Populus RhizosphereVVSMAACTAAFAWILTRPLIEPVYRSVLIPALGLFGVLFGLSYAGLA*
Ga0075426_1087290413300006903Populus RhizospherePMTIVSMAACTTAFAWVLTRPVIEPVYRAVLIPALGLFGMMFGLWYVGLG*
Ga0079216_1029098133300006918Agricultural SoilLGALAVFAPMSILSMALFTSAFAWVLTRPVVAPLYRTVLVPALGAFGLVFGLWYAGIT*
Ga0079216_1101549213300006918Agricultural SoilMFRRIACGTLLCAMAALTGAFGWLLTRPRVEPFYRAVLIPALGLFGVMFGLWYAGVG*
Ga0075435_10097088413300007076Populus RhizosphereVFAPMTIVSMAACTTAFAWVLTRRVVAPVYRTALIPAMGLFGLMFGLWYVGLG*
Ga0075435_10150737123300007076Populus RhizosphereISMTACTTGFAWVLTRPAIEPLYRTVLVPGLGVFGLMFGLWYAGLGI*
Ga0066710_10089529313300009012Grasslands SoilLEAAAALTVFAPMTVVSMAFCTTAFAWLLTRPAIEPVFRSVLIPALGLFALMFGSWYVGL
Ga0111539_1007500513300009094Populus RhizosphereAAAALALFAPMTVLSMIGCTSAFAWVLTRPLIEPIYRRVLIPVLGLFALAFGTWYAGIG*
Ga0075418_1246053033300009100Populus RhizosphereMSIVSMALCTTAFAWLLTRRVIDPIYRTVLIPAFGLFGVTFGLWYVGLV*
Ga0066709_10353521923300009137Grasslands SoilLEAAAAPAVFAPATIASMALCTTAFAWLLTRPLVEPIYRGVLIPAFGLFALMFGAWYAGIG*
Ga0105243_1071866713300009148Miscanthus RhizosphereLPTQLESAAALALFAPMSVLSMALCTSLFAWVLTRPIVEPVYRTVLIPALGLFALSFGAWYAGLT*
Ga0111538_1081551413300009156Populus RhizosphereAAALAVFAPMSIVSMAALTATFAWVLTRPLIEPVYRTVLIPSLGAFGVLFGVWYAGIG*
Ga0075423_1005840573300009162Populus RhizosphereMPSQLESALALAIFAPMSMVSMTACTTGFAWVLTRPAIEPLYRTVLVPGLGVFGLMFGLWYAGLGI*
Ga0075423_1301991323300009162Populus RhizosphereVLSMIGCTSAFAWVLTRPLIEPIYRRVLIPVLGLFALAFGTWYAGIG*
Ga0105242_1170218523300009176Miscanthus RhizosphereFAPMSAVSMTLCTTAFAWLLTRRLIDPLYRTVLIPGFGVFGLLFGAWYVGIG*
Ga0126313_1152060123300009840Serpentine SoilALPGRLEATLALAVFAPMAIVSMALFTTAFAWILTRRIVEPVYRAVLIPAVGTFGLLFGLWYAGIT*
Ga0126304_1019900023300010037Serpentine SoilGTEAAAALAVFAPMSVLSMAACTTVYSWILTRPVVDPVFRTVLIPALGAFGLMFGLWYAGIT*
Ga0126315_1009584923300010038Serpentine SoilMSVLSMAACTSVFAWALTRPVMEPLYRSVLIPGFGAFGLLFGGWYVGVL*
Ga0126309_1005543943300010039Serpentine SoilMSVLSMALCNSVFAWVLTRGVVEPVYRTVLIPALGLFGLVFGLWYSGITA*
Ga0126312_10000352123300010041Serpentine SoilLPGRAQWSSSWSTALPGRLEAAAALAVFAPATIASMVGFTAAFAWLLTRPAIEPLYRRALIPALGLLGLVFGAWYLGLS*
Ga0126312_1004361613300010041Serpentine SoilGVFAPMSIASMAACTAAFAWVLTRPIIEPLYRGVLIPAFGLFGVAFGLWYSGMG*
Ga0126312_1073382123300010041Serpentine SoilAEAAAALAVFAPMSMVSMAMCTSAFAWALTRPAVAPVYRVALMPAMGVFGVMFGLWYAGLT*
Ga0126314_1100516123300010042Serpentine SoilLAIFAPMSILSMALCTTAFAWILTRRIVEPVYRAVLIPAIGTFGLFFGLWYTGIS*
Ga0126310_1036017813300010044Serpentine SoilPMSIASMAACTAAFAWVLTRPAVEPLYRSVLIPALGASGLMFGLWYTGLA*
Ga0126310_1142958213300010044Serpentine SoilAAALALFAPMTLVSMATLTGTFAWLLTRRLVEPVYRAVLIPALGLFGLMFGLWYTGIT*
Ga0126311_1046181823300010045Serpentine SoilISARRRKPCGAAACTTVYSWILTRPVVDPVFRTVLIPALGAFGLMFGLWYAGIT*
Ga0126306_1098677313300010166Serpentine SoilAAALAAFAPMSVLSMALCTSLFAWVLTRPIVEPVYRTVLIPVLGLFALTFGAWYAGLT*
Ga0105246_1078293033300011119Miscanthus RhizosphereFEAALALGVFAPMSVVSMAACTAAFAWILTRPLIEPVYRSVLIPALGLFGVLFGLSYAGLA*
Ga0120114_109414713300011998PermafrostMDKFCTTAFAWLLTRRLIDPLYRNVLIPAFGLFGLMFGVWYIGLG*
Ga0120187_103299123300012015TerrestrialMSILSMALFTSAFAWVLTRPVVAPLYRTVLVPALGAFGLVFGLWYAGIT*
Ga0136627_107514423300012042Polar Desert SandLPTRIEAVAAMAVFAPMSILSMAAFTAAFAWVLTRPVIEPLYRAVVIPCLGAFGLVFGLWYTGLTG*
Ga0136623_1002947533300012045Polar Desert SandLEAAAALAVFAPMSVFSMALCTTAYSWILTRPLVDPIFRTVLIPALGAFGLMFGLWYSGIT*
Ga0136621_131825533300012092Polar Desert SandVFAPMSIFSMALFTTAFAWVLTRPVIEPLYRTVLIPALGAFGLMFGIWYAGIV*
Ga0136621_140588013300012092Polar Desert SandIAALPSQLEAAAALSVFAPMTIVSMAALTGAFGWLLTRPLVEPVYRAVLIPALGLFGLIFGLWYVGV*
Ga0136632_1004301113300012093Polar Desert SandFSMMACTSAFAWVLTRPVIEPVYRTVLIPALGAFGLLFGLWYVGLT*
Ga0136638_1041014923300012094Polar Desert SandMSIFSMALFTTAFAWVLTRPVIEPLYRTVLIPALGAFGLMFGIWYTGIV*
Ga0136610_103969033300012184Polar Desert SandIAALPSQLEASAALSVFAPMTIVSMAALTGAFGWLLTRPLVEPVYRAVLIPALGLFGLIFGLWYVGV*
Ga0136620_1011734113300012186Polar Desert SandQLEAAAALALFAPMSVVSMALGTSAFAWVLTRPLVEPVYRSVLIPALGLFALVFGSWYAGII*
Ga0136622_1035772923300012187Polar Desert SandMSVFSMAMWTGAFAWVLTRPMIEPVYRVALIPALGVFGLVFGGWYAGFT*
Ga0136630_105884723300012529Polar Desert SandVFAPMSIISMAACTAAFAWVLTRPAIEPVYRVLLIPLLGSFGILFGLWYVGLT*
Ga0136612_1069204713300012680Polar Desert SandAPMSVLSMALCTGAFAWVITRSALAPVVRTAVIPALGVFGLMFGSWYVGIT*
Ga0136614_1037670433300012684Polar Desert SandSQLEAVAALAVFAPMSILSMAIFTSAFAWVLTRPLIEPVYRTAVIPALGAFGLMFGLWYAGIT*
Ga0157296_1004483423300012905SoilMPGKLEAAAALAVFAPMSALSMTLCTTAFAWLLTRRLIDPLYRTVLIPGFGVFGLLFGAWYVGIG*
Ga0157286_1023347523300012908SoilVFAPMTIVSMAACTTAFAWVLTRPVIEPVYRAVLIPALGLFGMMFGLWYVGLG*
Ga0157290_1035432023300012909SoilSVLSMALCTSLFAWVLTRPIVEPVYRTVLIPALGLFALSFGAWYAGLT*
Ga0164303_1104394323300012957SoilALAVFAPASVISMAACTTAFAWFLTRRPIEPIFRTVLIPALGLFGLSFGLWYTGIT*
Ga0164304_1100111913300012986SoilIFAPMTIVSMAECTTAFAWVLTRRLVEPVYRTALIPALGLFGLMFGLWYVGLG*
Ga0173483_1094271913300015077SoilTIVSMAACTTAFAWVLTRPVVAPVYRTALIPALGLFGVMFGLWYVGLG*
Ga0173478_1031523723300015201SoilAVFAPMSLASMAACTAAFAWILTRPLVEPVYRAVVIPALGLFGVLFGLWYAGGG*
Ga0132255_10464251123300015374Arabidopsis RhizosphereFAPMSIVSMAACTTLFSWVLTRRIVDPVYRGVVIPALGGFGVLFGLSYAGLA*
Ga0184619_1039967123300018061Groundwater SedimentLAVFAPMSMVSMAACTAGFAWVLTRPAIEPLYRTVLVPGLGVFGVMFGLWYAGLG
Ga0184617_127805223300018066Groundwater SedimentAPMSIASMAALTAAFAWVLTRPLVEPFYRSVLIPGMGAFGVVFGLWYAGF
Ga0190265_1206708533300018422SoilEAAVAMAVFAPMSVFSMALCTTAFAWVLTRPVIEPVYRSVLIPALGSFGLIFGLWYVGLT
Ga0190272_1001939733300018429SoilMSVPSMAACTSVFAWPLTQPVMEPVYRTVLIPGLSAFGLLFGGWYVGLL
Ga0190272_1299253413300018429SoilAAVAALAVFAPMSVISMTLCTSAFAWVLTRPVIEPVHRTVLIPALAAFGLMFGLWYAGVT
Ga0190275_1214280013300018432SoilLALFAPMSILSMALFTTAFAWLLTRRIVEPVYRAVLIPAMGTFGLFFGLWYTGIT
Ga0190275_1287248223300018432SoilLIAAIPDPLAACAALAAFAPLSAVSMAVCTSGFAWTLTRPSVQNFSDTFLLPLLGAGGLLFGGVYAGLI
Ga0190270_1024397713300018469SoilRLEAALALGLFAQMSIASMALCTASFAWVLTRPLVEPVYRSVLIPALGLFGVLFGISYAGIG
Ga0190270_1323046913300018469SoilMSIVSMAALTAAFAWILTRPIIEPVYRTVLIPGLGAFGMVFGLWYAGLA
Ga0190274_1172783213300018476SoilLSVAPCTVAYAWILTRRLIQPVYRTALIPGFASFSLLFGLWYVGLT
Ga0190271_1026087213300018481SoilRLEAAAALAVFAPMSILSMAGLTGAFAWILTRPIVEPVYRAVLIPALGLFGLAFGLWYAGIT
Ga0190271_1378259533300018481SoilVLSMALCTCGFAWVLKRPALEPLYRAVLLPAFGLLALAFGLLYAGLI
Ga0190267_1089454623300019767SoilALALAVFAPMSVVSMAACTAAFAWVLTRPLVEPVYRAVLIPGLGLFGVMFGLSYVGLA
Ga0210382_1050590113300021080Groundwater SedimentASMAICTTAFAWVLTRRIVEPVYRTVLIPAMGLFGVMFGVWYIGLG
Ga0196962_1004728933300024430SoilRRCRTPSAAAALAVFAPMSIASMALCTSAFAWALTRGALYRTMLVPALGAFGLLFGLGYA
Ga0207687_1181326023300025927Miscanthus RhizospherePTPLAACAALAVFAPMSAVSMALCTSGFAWTLTRPAVIPVYRTVLMPALGAMGLLFGIWYIGLG
Ga0207690_1030712943300025932Corn RhizosphereEAGLALAVFAPMSVVSMAACTAAFAWILTRPLIEPVYRSVLIPALGLFGVLFGLSYAGLA
Ga0207704_1098867913300025938Miscanthus RhizosphereAVFAPMSMVSMTACTAGFAWVLTRPTIEPLYRTVLVPGLGVFGVMFGLWYAGLPV
Ga0207704_1196413313300025938Miscanthus RhizosphereIFAPMTIVSMAACTTAFAWVLTRRLVEPVYRTALIPALGLFGLMFGLWYVGLG
Ga0207641_1256949813300026088Switchgrass RhizosphereMTICTTAFAWVLTRRLVAPVYRTVLIPAFGLFGLVFGAWYAGLG
Ga0207683_1136411213300026121Miscanthus RhizosphereALAIFAPMTIVSMAACTTAFAWVLTRRLVEPVYRTALIPALGLFGLMFGLWYVGLG
Ga0208891_100445913300026878SoilAMPGKVEAAAALAVFAPMSAVSMTLCTTAFAWLLTRRLIDPLYRTVLIPGFGVFGLLFGAWYVGIG
Ga0208736_114716513300027618Polar DesertAVFAPVSIASMALCTTAFAWVLTRPIIEPAYRTVLIPVLGGFGVLFGLSYAGLT
Ga0207428_1033102243300027907Populus RhizosphereGLALAVFAPMSVVSMAACTAAFAWILTRPLIEPVYRSVLIPALGLFGVLFGLSYAGLA
Ga0207428_1080101523300027907Populus RhizosphereVVSMAACTSAFAWALTRPAVMPVYRVVLMPAMGLFGVLFGLWYVGLT
Ga0268266_1104441713300028379Switchgrass RhizosphereLFAPMTAVSMTICTTAFAWVLTRRLVAPVYRTVLIPAFGLFGLVFGAWYAGLG
Ga0268265_1060755923300028380Switchgrass RhizosphereMSVVSMAACTAAFAWILTRPLIEPVYRSVLIPALGLFGVLFGLSYAGLA
Ga0247828_1033795923300028587SoilSIASMALCTTAFAWVLTRRIVEPVYRSALIPAIGLFGVTFGVWYMGLV
Ga0247828_1080404723300028587SoilLALAVFAPMSVVSMAACTAAFAWILTRPLIEPVYRSVLIPALGLFGVLFGLSYAGLA
Ga0247818_1142592513300028589SoilAPMSVLSMAAFTTAFAWLLTRRPIEPFYRAVLIPVLGLFGLSFGLWYTGIS
Ga0307321_105100523300028704SoilLPTPLAACAALAVFAPMSAVSMALCTSGFAWTLTRPAVVPVYRTVLMPALGAMGLLFGIWYIGLG
Ga0307311_1007570823300028716SoilFAPMTIVSMAMCTTAFAWLLTRRVIDPIYRSVLIPAFGLFGVSFGLWYVGLG
Ga0307311_1020631413300028716SoilVFAPMSIVSMAALTATFAWVLTRRIVEPVYRTVLIPALGSFGVLFGLWYAGLG
Ga0307297_1023078023300028754SoilVVSMAACTAAFAWILTRPLIEPVYRSVLIPALGLFGVLFGLSYAGLA
Ga0307316_1001800433300028755SoilQLEAASALAVFAPMSIASMALCTGVFAWVLTRPIVEPVYRTVLIPALGLFGVMFGMWYVGLG
Ga0307316_1019554813300028755SoilMALCTTAFAWLLTRRVIDPLYRTVLIPAFGLFGVSFGLWYVGLG
Ga0307320_1047084313300028771SoilIVSMALCTGVFAWVLTRPIVEPVYRTVLIPALGLFGVMFGMWYAGLG
Ga0307288_1017597713300028778SoilAVFAPMSIASMAALTAAFAWVLTRPLVEPFYRSVLIPGMGAFGVVFGLWYAGF
Ga0307323_1038119313300028787SoilSMAACTTVFAWVLTRPLVEPVYRSVLIPVLGLFGMMFGLWYVGLG
Ga0307287_1035154723300028796SoilPMSIASMAALTAAFAWILTRPLIEPVYRSVLIPALGAFGIMFGVWYMG
Ga0307305_1016715843300028807SoilMTLCTTAFAWLLTRKLIDPLYRNVLIPAFGLFGLMFGVWYIGLG
Ga0247824_1096413413300028809SoilAAAALAVFAPMSAVSMTLCTTAFAWLLTRPLIDPLYRTVLIPSFGVFGVFFGIWYVGLG
Ga0307302_1037273523300028814SoilLALAVFAPMSVASMAACTAAFAWVLTRPLVEPVYRSVLIPGLGLFGVMFGLSYAGLA
Ga0307302_1054330613300028814SoilGLALAVFAPMSIVSMATLTAAFAWVLTRRVIDPIYRSVLIPGMGAFGIVFGMWYAGLG
Ga0307296_1074332413300028819SoilPTQLEAVLALALFAPMSMISMAMCTTAFAWALTRPVLAPAYRSVLIPAFGAFGILFGLWYVGIT
Ga0307296_1081835013300028819SoilFAPMTIFSMAACTTAFTWLLTRPLIEPVYRSVLIPALGVFGLTFGLWYVGLA
Ga0307312_1045337913300028828SoilLLLTALPTQLEAGLALAVFAPMTIASMAACTTVFAWVLTRPLVEPVYRGVLIPVLGLFGLMFGLWYVGLG
Ga0307314_1020140313300028872SoilAVFAPMSIVSMAALTAAFAWVLTRRIVEPVYRTVLIPALGSFGVLFGLWYAGLG
Ga0307286_1020586313300028876SoilFEAALALAVFAPMSVASMAACTAAFAWVLTRPLVEPVYRSVLIPGLGLFGVMFGLSYAGL
Ga0307300_1030198613300028880SoilMSVISMAACTTAYSWVFTRPAIDPIFRSVLVPALGAFGLIFGLWYAGIT
Ga0307277_1043489823300028881SoilLPTRLEAALSLAVFAPVTIFSMAACTTAFAWVLTRPLIEPVYRSVLIPALGLFGLTFGLWYVGLG
Ga0307308_1023331713300028884SoilFAPMSALSMTLCTTAFAWLLTRKLVDPLYRNVLIPAFGLFGLMFGVWYIGLG
Ga0247827_1115455413300028889SoilMSIVSMAIFTSAFAWVLTRPVVAPLYRTVLVPALGAFGLVFGLWYAGIT
Ga0247826_1024707613300030336SoilEAALALGVFAPMSIASMALCTTAFAWVLTRRIVEPVYRSALIPAIGLFGVTFGVWYMGLV
Ga0247826_1064641033300030336SoilPMSVASMALLTGVFAWVLTRPIVEPVYRTVLIPALGVFALMFGAWYTGIT
Ga0247826_1109690713300030336SoilVFAPMSMVSMAICTTAFAWVLTRPAIDPVYRTVLIPAMGLFGVSFGLWYVGLG
Ga0247826_1135839923300030336SoilSAALAVFAPMSAVSMAACTSGFAWTLTRPAVLPVYRTVLMPALGAMGLVFGLWYVGLA
Ga0247826_1160314613300030336SoilAALAVFAPMSIVSMALLTGVFAWVLTRPIVEPVYRTVLIPALGLFGVMFGMWYVGIG
Ga0308183_113478123300030988SoilVSMTICTTAFAWVLTRRLVAPVYRTVLIPAFGLFGLVFGAWYAGLG
Ga0307501_1007966813300031152SoilAACAALAVFAPMSAASMALCTSGFAWTLTRPAVAPVYRTVLMPALGAMGLLFGIWYIGLG
Ga0299913_1100053623300031229SoilALALAVFAPMSIFSMALCTTAFAWVLTRRVIEPLYRAVLIPAMGTFGLFFGLWYTGIT
Ga0272433_1019329613300031450RockSVLSMALCTSAFAWLLTRPVIEPLYRTALIPALGIFGLLFGGWYAGIT
Ga0307408_10154426023300031548RhizosphereVFAPMSMASMAMCTSAFAWALTRPALAPLYRAALMPAMGVFGLMFGLWYVGLG
Ga0307413_1042228213300031824RhizosphereAPMSMVSMAMCTSAFAWALTRPALAPLYRAALMPAMGVFGLMFGLWYVGLG
Ga0307410_1033456713300031852RhizosphereEAALALAVFAPMSIVSMAAFTAAFAWVLTRPLIEPVYRTVLIPGMGAFGMVFGLWYAGLA
Ga0307414_1204380913300032004RhizosphereMSIASMAALTAAFAWVLTRPIIEPVYRGILIPALGLFGVMFGAWYMA
Ga0326721_1068347113300032080SoilAMCTSAFAWALTRPALAPLYRAALMPAMGVFGLMFGLWYVGLS
Ga0247829_1074750213300033550SoilTALAWLLTRRLIDPLYRTVLVPVFGVFGLFFGAWYVGIG
Ga0364935_0157129_562_7113300034151SedimentMSVASMAACTAAFAWVLTRPLVEPVYRSVLIPGLGLFGVMFGLSYAGLA
Ga0373950_0065563_590_7363300034818Rhizosphere SoilMVSMTACTTGFAWVLTRPAIEPLYRTVLVPGLGVFGLMFGLWYAGLGI
Ga0373958_0050322_46_1983300034819Rhizosphere SoilMSMVSMTACTTGFAWVLTRPAIEPLYRTVLVPGLGVFGLMFGLWYAGLGI


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.