Metagenome / Metatranscriptome Family F037643

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F037643
Family Type	Metagenome / Metatranscriptome
Number of Sequences	167
Average Sequence Length	93 residues
Representative Sequence	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDRLEAQLQEPAATLAQVTETVWNLRQELTGGLTETIVAHAHRGESTRQQTRCPQC
Number of Associated Samples	142
Number of Associated Scaffolds	167

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.18 %
% of genes near scaffold ends (potentially truncated)	84.43 %
% of genes from short scaffolds (< 2000 bps)	96.41 %
Associated GOLD sequencing projects	136
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (76.647 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (13.772 % of family members)
Environment Ontology (ENVO)	Unclassified (19.760 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.120 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.90% β-sheet: 0.00% Coil/Unstructured: 43.10%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 167 Family Scaffolds
PF01609	DDE_Tnp_1	2.40
PF00107	ADH_zinc_N	1.20
PF06782	UPF0236	1.20
PF01925	TauE	0.60
PF01420	Methylase_S	0.60
PF00206	Lyase_1	0.60
PF00188	CAP	0.60
PF04392	ABC_sub_bind	0.60
PF13359	DDE_Tnp_4	0.60
PF14076	DUF4258	0.60
PF00856	SET	0.60
PF13610	DDE_Tnp_IS240	0.60
PF03050	DDE_Tnp_IS66	0.60
PF13180	PDZ_2	0.60
PF00665	rve	0.60
PF02371	Transposase_20	0.60
PF13518	HTH_28	0.60
PF14384	BrnA_antitoxin	0.60
PF00479	G6PD_N	0.60
PF00589	Phage_integrase	0.60
PF13522	GATase_6	0.60
PF01381	HTH_3	0.60
PF02776	TPP_enzyme_N	0.60
PF02796	HTH_7	0.60
PF02321	OEP	0.60
PF01610	DDE_Tnp_ISL3	0.60
PF12760	Zn_Tnp_IS1595	0.60
PF09339	HTH_IclR	0.60
PF07883	Cupin_2	0.60
PF13676	TIR_2	0.60
PF02706	Wzz	0.60
PF13577	SnoaL_4	0.60
PF01527	HTH_Tnp_1	0.60
PF01797	Y1_Tnp	0.60
PF00119	ATP-synt_A	0.60
PF13473	Cupredoxin_1	0.60
PF01624	MutS_I	0.60

COG ID	Name	Functional Category	% Frequency in 167 Family Scaffolds
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	2.40
COG3293	Transposase	Mobilome: prophages, transposons [X]	2.40
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	2.40
COG5421	Transposase	Mobilome: prophages, transposons [X]	2.40
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	2.40
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	2.40
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.20
COG0249	DNA mismatch repair ATPase MutS	Replication, recombination and repair [L]	0.60
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	0.60
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	0.60
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.60
COG0732	Restriction endonuclease S subunit	Defense mechanisms [V]	0.60
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.60
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	0.60
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.60
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.60
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.60
COG3206	Exopolysaccharide export protein/domain GumC/Wzc1	Cell wall/membrane/envelope biogenesis [M]	0.60
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.60
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.60
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.60
COG3524	Capsule polysaccharide export protein KpsE/RkpR	Cell wall/membrane/envelope biogenesis [M]	0.60
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.60
COG3765	LPS O-antigen chain length determinant protein, WzzB/FepE family	Cell wall/membrane/envelope biogenesis [M]	0.60
COG3944	Capsular polysaccharide biosynthesis protein YveK	Cell wall/membrane/envelope biogenesis [M]	0.60
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.65 %
Unclassified	root	N/A	23.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	76.65 %
Unclassified	root	N/A	23.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	76.65 %
Unclassified	root	N/A	23.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.39 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.20 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.20 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	1.20 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.35 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.40 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.20 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	0.60 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.60 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.60 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.60 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.60 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.35 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.40 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.60 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.60 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.60 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.60 %
Thiotrichales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales	0.60 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.60 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.60 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.35 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.20 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.60 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.60 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.60 %
Chloroflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales	0.60 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.60 %
Thiotrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae	0.60 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.60 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.60 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.60 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.35 %
Candidatus Sungbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Sungbacteria	0.60 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.60 %
Desulfocapsaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae	0.60 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.60 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.60 %
Chloroflexineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae	0.60 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.60 %
Beggiatoa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Beggiatoa	0.60 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	0.60 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.60 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.60 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.35 %
unclassified Beggiatoa	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Beggiatoa → unclassified Beggiatoa	0.60 %
Candidatus Sungbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Sungbacteria → Candidatus Sungbacteria bacterium	0.60 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.60 %
Desulfocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfocapsa	0.60 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	0.60 %
Oscillochloridaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Oscillochloridaceae	0.60 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.60 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.60 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.60 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.60 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.60 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.35 %
Variovorax sp. OV329	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. OV329	0.60 %
Beggiatoa sp. IS2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Beggiatoa → unclassified Beggiatoa → Beggiatoa sp. IS2	0.60 %
unclassified Desulfocapsa	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfocapsa → unclassified Desulfocapsa	0.60 %
Oscillochloris	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Oscillochloridaceae → Oscillochloris	0.60 %
Candidatus Sungbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Sungbacteria → Candidatus Sungbacteria bacterium	0.60 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.60 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.60 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.60 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.60 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.60 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.60 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	23.35 %
Candidatus Oscillochloris fontis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Oscillochloridaceae → Oscillochloris → Candidatus Oscillochloris fontis	0.60 %
Desulfocapsa sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfocapsa → unclassified Desulfocapsa → Desulfocapsa sp.	0.60 %
Variovorax sp. OV329	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. OV329	0.60 %
Beggiatoa sp. IS2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Beggiatoa → unclassified Beggiatoa → Beggiatoa sp. IS2	0.60 %
Candidatus Sungbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Sungbacteria → Candidatus Sungbacteria bacterium	0.60 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	0.60 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	0.60 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.60 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.60 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.60 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	0.60 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000043\|ARcpr5yngRDRAFT_c005339	All Organisms → cellular organisms → Bacteria	1187	Open in IMG/M
3300000890\|JGI11643J12802_10743800	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300004463\|Ga0063356_106489874	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005176\|Ga0066679_10988367	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005186\|Ga0066676_11182658	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300005294\|Ga0065705_10167872	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300005294\|Ga0065705_10767588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp. OV329	623	Open in IMG/M
3300005332\|Ga0066388_104554125	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300005332\|Ga0066388_104619618	Not Available	701	Open in IMG/M
3300005468\|Ga0070707_100462439	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300005471\|Ga0070698_100345662	All Organisms → cellular organisms → Bacteria	1419	Open in IMG/M
3300005536\|Ga0070697_100727937	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300005554\|Ga0066661_10605543	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300005558\|Ga0066698_10621894	All Organisms → cellular organisms → Bacteria → Proteobacteria	725	Open in IMG/M
3300005559\|Ga0066700_10598204	Not Available	769	Open in IMG/M
3300005560\|Ga0066670_10915944	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300005713\|Ga0066905_101551535	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300005764\|Ga0066903_109122214	Not Available	501	Open in IMG/M
3300005937\|Ga0081455_10783222	Not Available	600	Open in IMG/M
3300005937\|Ga0081455_10877283	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300006032\|Ga0066696_10966965	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300006797\|Ga0066659_10769604	Not Available	793	Open in IMG/M
3300006845\|Ga0075421_102209995	Not Available	580	Open in IMG/M
3300006845\|Ga0075421_102820144	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300006846\|Ga0075430_100183177	All Organisms → cellular organisms → Bacteria	1742	Open in IMG/M
3300006846\|Ga0075430_100951113	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300006854\|Ga0075425_100666244	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300006854\|Ga0075425_102309494	Not Available	598	Open in IMG/M
3300006880\|Ga0075429_100914966	Not Available	767	Open in IMG/M
3300009012\|Ga0066710_102299280	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300009038\|Ga0099829_11766066	Not Available	507	Open in IMG/M
3300009088\|Ga0099830_10965984	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfocapsaceae → Desulfocapsa → unclassified Desulfocapsa → Desulfocapsa sp.	705	Open in IMG/M
3300009089\|Ga0099828_11416084	Not Available	614	Open in IMG/M
3300009089\|Ga0099828_11740542	Not Available	548	Open in IMG/M
3300009090\|Ga0099827_10133597	All Organisms → cellular organisms → Bacteria → Proteobacteria	2013	Open in IMG/M
3300009090\|Ga0099827_10297019	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300009090\|Ga0099827_10551591	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300009090\|Ga0099827_11882707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	521	Open in IMG/M
3300009092\|Ga0105250_10403110	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300009100\|Ga0075418_11094857	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300009100\|Ga0075418_12300733	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300009101\|Ga0105247_11765597	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300009162\|Ga0075423_12321047	Not Available	584	Open in IMG/M
3300009678\|Ga0105252_10202396	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300009796\|Ga0105086_118016	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300009822\|Ga0105066_1022858	Not Available	1242	Open in IMG/M
3300009840\|Ga0126313_10550528	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300010029\|Ga0105074_1108606	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300010037\|Ga0126304_10095690	Not Available	1871	Open in IMG/M
3300010038\|Ga0126315_11258992	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300010040\|Ga0126308_10975863	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300010042\|Ga0126314_11520570	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300010043\|Ga0126380_12225937	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300010046\|Ga0126384_10861362	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300010048\|Ga0126373_11722916	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300010113\|Ga0127444_1056284	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300010304\|Ga0134088_10612368	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300010359\|Ga0126376_13068459	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300010360\|Ga0126372_12430371	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300010366\|Ga0126379_11966223	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300010366\|Ga0126379_12999603	Not Available	565	Open in IMG/M
3300010862\|Ga0126348_1090307	Not Available	550	Open in IMG/M
3300011269\|Ga0137392_10139710	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1948	Open in IMG/M
3300011269\|Ga0137392_10772910	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	794	Open in IMG/M
3300012199\|Ga0137383_10637516	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300012200\|Ga0137382_10748998	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300012205\|Ga0137362_10875889	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300012205\|Ga0137362_11203452	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300012206\|Ga0137380_10029978	All Organisms → cellular organisms → Bacteria	5013	Open in IMG/M
3300012207\|Ga0137381_10869776	Not Available	780	Open in IMG/M
3300012211\|Ga0137377_10804633	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300012212\|Ga0150985_101216390	All Organisms → cellular organisms → Bacteria	1639	Open in IMG/M
3300012383\|Ga0134033_1120177	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300012390\|Ga0134054_1061542	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300012396\|Ga0134057_1345470	Not Available	500	Open in IMG/M
3300012401\|Ga0134055_1083264	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300012405\|Ga0134041_1326984	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300012406\|Ga0134053_1317833	Not Available	521	Open in IMG/M
3300012469\|Ga0150984_104569400	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300012469\|Ga0150984_104569750	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300012491\|Ga0157329_1008700	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300012500\|Ga0157314_1056534	Not Available	515	Open in IMG/M
3300012917\|Ga0137395_10643730	Not Available	767	Open in IMG/M
3300012917\|Ga0137395_11170280	Not Available	540	Open in IMG/M
3300012917\|Ga0137395_11248914	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300012927\|Ga0137416_11298536	Not Available	657	Open in IMG/M
3300012944\|Ga0137410_10686620	Not Available	852	Open in IMG/M
3300012948\|Ga0126375_10584798	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300012948\|Ga0126375_11381947	Not Available	596	Open in IMG/M
3300012957\|Ga0164303_10958036	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300012961\|Ga0164302_10909942	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300012971\|Ga0126369_10162686	All Organisms → cellular organisms → Bacteria	2113	Open in IMG/M
3300012977\|Ga0134087_10728479	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300014326\|Ga0157380_10480558	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300014874\|Ga0180084_1095762	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300015372\|Ga0132256_102190877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Beggiatoa → unclassified Beggiatoa → Beggiatoa sp. IS2	657	Open in IMG/M
3300015372\|Ga0132256_102880563	Not Available	578	Open in IMG/M
3300015373\|Ga0132257_100085305	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	3603	Open in IMG/M
3300016294\|Ga0182041_10522281	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300016319\|Ga0182033_11182886	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300016319\|Ga0182033_11657033	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300016387\|Ga0182040_10346519	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1150	Open in IMG/M
3300016404\|Ga0182037_10993524	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300016445\|Ga0182038_11950495	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300018000\|Ga0184604_10317280	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300018027\|Ga0184605_10503342	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300018053\|Ga0184626_10354428	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300018060\|Ga0187765_10815379	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300018422\|Ga0190265_11416514	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	810	Open in IMG/M
3300018433\|Ga0066667_11819497	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300018482\|Ga0066669_11685829	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300019249\|Ga0184648_1429109	Not Available	595	Open in IMG/M
3300020084\|Ga0194110_10305444	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300020193\|Ga0194131_10153398	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300025910\|Ga0207684_10980744	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300026095\|Ga0207676_11463192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → Chloroflexales → Chloroflexineae → Oscillochloridaceae → Oscillochloris → Candidatus Oscillochloris fontis	680	Open in IMG/M
3300026322\|Ga0209687_1288800	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300026325\|Ga0209152_10503321	Not Available	500	Open in IMG/M
3300026335\|Ga0209804_1109240	Not Available	1264	Open in IMG/M
3300026540\|Ga0209376_1204933	Not Available	892	Open in IMG/M
3300026790\|Ga0208710_107583	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300027006\|Ga0209896_1028290	Not Available	639	Open in IMG/M
3300027835\|Ga0209515_10371359	All Organisms → cellular organisms → Bacteria	775	Open in IMG/M
3300027846\|Ga0209180_10100380	All Organisms → cellular organisms → Bacteria	1649	Open in IMG/M
3300027909\|Ga0209382_12044312	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300030006\|Ga0299907_10223438	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1550	Open in IMG/M
3300030570\|Ga0247647_1039249	Not Available	943	Open in IMG/M
3300030902\|Ga0308202_1082821	Not Available	639	Open in IMG/M
3300031058\|Ga0308189_10299232	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300031226\|Ga0307497_10054603	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300031422\|Ga0308186_1030167	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300031546\|Ga0318538_10748508	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300031562\|Ga0310886_10234430	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Sungbacteria → Candidatus Sungbacteria bacterium	1019	Open in IMG/M
3300031573\|Ga0310915_10914904	Not Available	614	Open in IMG/M
3300031740\|Ga0307468_102399600	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300031744\|Ga0306918_11397909	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300031805\|Ga0318497_10497675	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300031833\|Ga0310917_11080697	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300031852\|Ga0307410_11180473	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300031879\|Ga0306919_11039234	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300031890\|Ga0306925_10451310	Not Available	1374	Open in IMG/M
3300031908\|Ga0310900_10321586	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300031910\|Ga0306923_10317987	All Organisms → cellular organisms → Bacteria	1777	Open in IMG/M
3300031912\|Ga0306921_12201165	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300031944\|Ga0310884_11027102	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300031954\|Ga0306926_10377205	All Organisms → cellular organisms → Bacteria	1752	Open in IMG/M
3300032002\|Ga0307416_102088616	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300032025\|Ga0318507_10386365	Not Available	610	Open in IMG/M
3300032063\|Ga0318504_10475201	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300032076\|Ga0306924_12467567	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300032076\|Ga0306924_12484097	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300032159\|Ga0268251_10135112	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300032205\|Ga0307472_101325283	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300032261\|Ga0306920_103146669	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300033289\|Ga0310914_11786382	Not Available	519	Open in IMG/M
3300034151\|Ga0364935_0187431	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300034151\|Ga0364935_0303827	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300034660\|Ga0314781_072670	All Organisms → cellular organisms → Bacteria	653	Open in IMG/M
3300034670\|Ga0314795_056856	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300034671\|Ga0314796_157930	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300034674\|Ga0314799_037526	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	563	Open in IMG/M
3300034676\|Ga0314801_117207	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300034676\|Ga0314801_173578	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300034678\|Ga0314803_036000	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300034678\|Ga0314803_094585	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.04%
Host-Associated	Host-Associated	17.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.65%
Plants	Host-Associated → Plants	17.96%
Aquatic	Environmental → Aquatic	5.39%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.39%
Freshwater	Environmental → Aquatic → Freshwater	2.40%
Sediment	Environmental → Aquatic → Sediment	2.99%
Floodplain	Environmental → Terrestrial → Floodplain	1.20%
Phylloplane	Host-Associated → Plants → Phylloplane	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.58%
Loam	Environmental → Terrestrial → Soil → Loam	5.99%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.59%
Sand	Environmental → Terrestrial → Soil → Sand	2.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.80%
Lake	Environmental → Aquatic → Freshwater → Lake	1.20%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.20%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.60%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.60%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.58%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.58%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.40%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.20%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.20%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.60%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.60%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.60%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.40%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.40%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.99%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.80%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.20%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.20%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.20%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.20%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.20%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.20%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.20%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.20%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.20%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.20%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.60%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.60%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.60%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.60%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.60%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.60%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.60%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000043	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 young rhizosphere	Host-Associated	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009796	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_0_10	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010113	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012383	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012392	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012491	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610	Host-Associated	Open in IMG/M
3300012500	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610	Host-Associated	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014874	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_2_16_10D	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020084	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200m	Environmental	Open in IMG/M
3300020193	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015053 Kigoma Offshore 120m	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026790	Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized -NN607 (SPAdes)	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030570	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb12 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031422	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_181 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034660	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034670	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034671	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034674	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034676	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034678	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ARcpr5yngRDRAFT_0053393	3300000043	Arabidopsis Rhizosphere	MGAAEVIAFEEVRARKQWDALRGQLHTRFDQWLDGLEAQLQEPAPTLAQVTETVWNRRQELTGSLTETIVAHAHRGESTRPTASFRTSGRI*
JGI11643J12802_107438001	3300000890	Soil	MGAAEVISFEETRARKQWDALRHQLHDRFDQWLDGLQEQLPEPELTLAQVTETVWNLRQALTGGLTEAIVEHAYRGEHTRQ
Ga0063356_1064898741	3300004463	Arabidopsis Thaliana Rhizosphere	MGAAEVIAFEEVCARQQWDTLRQQLHERFDQWLDTLETQWHEPPATLPEMTATVWNLRQQLTGGIPGALVAHVHRGEHDRTQGNCPRCEGVLREQEFVCRTVE
Ga0066679_109883672	3300005176	Soil	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDELEAQLQEPAPSLAQVTEAVWNLRQALTGGLTETIVEHAHRGEHTR
Ga0066676_111826581	3300005186	Soil	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDELEAQLQEPAPSLAQVTEAVWNLRQALTGGLTETIVEHAHRGEHTRQQSRCPQCARLLTARDPVRRT
Ga0065705_101678723	3300005294	Switchgrass Rhizosphere	MGAAEVISFEEVRARKQWDTLRQQLHARFDHWLDTLEQQWHEPPSTLLEVTATVWALRQQLTGGLTETIVKYAHEGECQ
Ga0065705_107675881	3300005294	Switchgrass Rhizosphere	MGAAEVISFEEVRARKQWDALRGRLHTRFDQWLDALEAQLQEPAPSLAQVAETVWNLRQALTGGLTEAIVEHAHRGEHTRQQSHCPQCERLLKARAP
Ga0066388_1045541251	3300005332	Tropical Forest Soil	MGAAEVIAFEEVRARKQWDTLRQRLHACFDQWLDILEQQWPEPPSTLMEVTSTVWDLRQQLTSGLSETIIAHVHRGEHERHKVLCPKCDRGLQAREPVCRT
Ga0066388_1046196182	3300005332	Tropical Forest Soil	VGCPEVISLAKVRASKQWETLRQQLHERFDQWLDTLETQWPEPPTTLPEMTATVWNLRQQLTGGITEAIVAHVHHGEH
Ga0070707_1004624391	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MGATEVIAFEEVRARKQWATLRQRLHERFDQWLDRLEERLQEPAPPLSAVTETVWHLRQERTGGLTETIIAHAHLGESTRHQTCCPQCHRLVK
Ga0070698_1003456621	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MGAAEVIAFEEVRARKQWDTLRHQLHERFDQWLDTLETQWHEPPATLPERTATVWTLRQQLTGGITEAIVAHVHRGEHDRTQV
Ga0070697_1007279371	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MGAAEIISFEEVRARKQWDALRQELHTRFDEWLDRLEIQLPGSAPTLAQVTETVWNLRQALTGGLTETIVEHTHRGEYTRQQTHCAKCGRLLTAHAHVS
Ga0066661_106055431	3300005554	Soil	MGAAEVIAFEEVRARKQWDTLRHQLHERFDQWLDTLETQWHEPPATLPEMTATVWNLRQQLTGGITEAIVAHVHRGEHDRTQVNCPRCDRVLRAQEFVCR
Ga0066698_106218941	3300005558	Soil	MGAAEVISFEEVRARKQWEALRHQLHDRFDQWLDSLEAQLQEPVPTLAQVTETVWNLRQALTGGLTETIIEHTHRDEHTRQQNRCPQCARLLKARDP
Ga0066700_105982041	3300005559	Soil	MGCAEAISFTEVRASKQWDALRQQLHTRFDQWLDTLEQQLHEPSPTLSQVSDTVWGLRQSLTGGITETIVKQAHEGERQRFHIYNPCFNVICIKTRCWL*
Ga0066670_109159442	3300005560	Soil	MGAAEVISFEEIRARKQWGTLRHQLHERFDQWLDTLETQWHEPPATLPEMTATVWNLRQQLTGGITEAIVAHVHRGEHDRPQVNCPRCDGVLRAQECVCR
Ga0066905_1015515352	3300005713	Tropical Forest Soil	MGAAEVISFEEVRARKQWDTLRQQLPARFDHWLDTLEQQWHEPPSTLMEVTATVWDLRQQLTGGLTETIVKSAHEGECQRQQASCPRCRRVLQAQEHVWRTVETMVGPV
Ga0066903_1058486002	3300005764	Tropical Forest Soil	MGAAEVISFEEVRARKQWDALRHQLRDRFDQWLDGLEAQLQEPAPPLTRVTETVWHLRQALTGGLQGHLVF*
Ga0066903_1091222141	3300005764	Tropical Forest Soil	VGCAEIIALAEVRASKQWEILRQQLHARFDQWLDTLEQQWPVPPSSLPEVTATVWNVRQQLTGSITETIVAHVHQSEHDRQQASCTRCEGVLRARAF
Ga0081455_107832221	3300005937	Tabebuia Heterophylla Rhizosphere	MGAAEVISFEEVHARKQWDALRRQLHTRFDQWLDGLEAQLHEPAPTLAQVTETVWNLRQALTGGLTETIVEHTHQDEHTRQQNRCPQCDRL*
Ga0081455_108772832	3300005937	Tabebuia Heterophylla Rhizosphere	VGCAEVISFEEVRARKQWDALRQELHTRFDQWLNELEAQLPGPAPTLAQVTETVWHLRQALTGGLAETVVQHIHRGESTRQQACCPVCDRLLTARTPVA
Ga0066696_109669652	3300006032	Soil	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDALEAQLQEPVPSLAQVTETVWNLRQALTGGLTETIVEHAHRGEHTRQQSHC
Ga0066659_107696042	3300006797	Soil	MGAAEVIAFEEVRASKQWDALRGQLHTRFDQWLDGLEAQLQEPAPTLAQVTETRWNLRQELTGGLTETIVAHAHRGASTRQQTRCPQCERCLQARAPVSRTVESMLGAVEIERPSFY*
Ga0075421_1022099952	3300006845	Populus Rhizosphere	MGAAEVISFEEVRARKQWDALRHQLHDRFDQWLDGLQEQLPEPEPTLAQVTETVWNLRQALTGGLTEAIVEHAHRGEHTRQQSHCPQ
Ga0075421_1028201441	3300006845	Populus Rhizosphere	MGAAEVIAFKEVRARKQRDAPRRQLHTRFDQWLDALEAQLPEPAPSLAQVTETVWNLRQALTGGLTETIVEHAHRDEHTRQQSRCPQCARLL
Ga0075430_1001831773	3300006846	Populus Rhizosphere	MGAAEVISFEEVHARKQWDTLRHQLHERFDQWLDTLETQWHEPPATLPEMTTMVWNLRQQLTGGITEAMVAHVHRGEHDRTQVNCPRCHGVLRA*
Ga0075430_1009511131	3300006846	Populus Rhizosphere	MGAAEVIAFEEIRASKQWDALRQQLHERFDQWLDTLEQQWHEPPSTLTEVTATVWDLRQQLTGGITETIVAQVHRREHDRTQVAC
Ga0075425_1006662442	3300006854	Populus Rhizosphere	MGAAEVIAFEEVRARKHWDTLRHQLHACFDQWLDMLETQWHEPPSTLPEVTATVWALRQQLTGSSTETIVAHVHRSEHDRQQATCPRCQR
Ga0075425_1023094941	3300006854	Populus Rhizosphere	MGCAEIISFDEVRARKQWESRRQQRHARFDQWLDQLEEQWPESEPTLAAVTETVWDLRHALTGSLPATMVAHTHQAAYTRQRRHCPQCDRLFTARAPVPRTGETMV
Ga0075429_1009149662	3300006880	Populus Rhizosphere	MGAAEVISFEEARARKQWDALRHQLHARFDQWLDGLQEQLPEPELTLAQVTETVWNLRQALTGGLTEAIVEHAHRGEHTRQQSHCPQCDRLLKARAPVQ
Ga0066710_1022992802	3300009012	Grasslands Soil	MGAAEVISFEEVRARKQWDPLRHQLHERFDQWLDTLESQWHEPPTPLPEMTATVWHLRQQLTGGITQVIAAHVHRGEHDRTQA
Ga0099829_117660661	3300009038	Vadose Zone Soil	ESPMVAAEIISFEEVRARKQWEALRQELHTRFDEWLAALDAQRQAAAPTLAQVTGTVWNLRQALTGGLTKTIVEHAHRGEAHVEFQGRNGSSLA*
Ga0099830_109659841	3300009088	Vadose Zone Soil	MGCAEVISLSEVRASKQWDVLRQQLHQRFDQWLDTLEQQLHEPSPTFSQVSDIVWGLRQSRTGGITETIDKQAHEGERQRTQTRCPGCTRV
Ga0099828_114160841	3300009089	Vadose Zone Soil	MGAAEIISFEEVRARKQWEALRQELHTRFDEWLAGLEAQRQASAPTLAQVTGTVWNLRQALTGGLTKTIVEHAHRGEAHVEFQGRNGSSLA*
Ga0099828_117405422	3300009089	Vadose Zone Soil	MGAAEVISFEEVRAKKQWDALRRQLHTRFDQWLDGLEAQLQKPVPTLAQVTKTVWNLRQGLTGSLTQTIIEHTHLGE
Ga0099827_101335974	3300009090	Vadose Zone Soil	MGAAEVIAFEEVRARKQWDTLRHQLHERFDQWLDTLEMQWHEPPSTLLEVTATVRTLRQQLTGSITETIVAHVHRGEHDRHQGTCPRCNGVLRARAL
Ga0099827_102970193	3300009090	Vadose Zone Soil	MGCAEVIALDEIRARKHWTTLRQALHARFDQWLDTLEQQLREPPPTLSQVSDTVWGLRQSLTGGITETIVKQAHEGERQRTQARCPRCTRVLKVQ
Ga0099827_105515911	3300009090	Vadose Zone Soil	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDGLETQLQEPAPTLAQVTETVWNLRQALTGSLTETRVEHAHRGESTRQQTHCPQCDRCLKARAPVLRTVETMVGAV*
Ga0099827_118827071	3300009090	Vadose Zone Soil	MGAAELISLDEVRARKQWESLRQQLHACFDQWLDRREEQLPESEPTLAAVTKTVWNLRQALTGSLTETMIAPVHRGEHTRPQSCCRQCDRPLTARAPVQRTV
Ga0105250_104031101	3300009092	Switchgrass Rhizosphere	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDRLEAQLQEPAATLAQVTETVWNLRQELTGGLTETRVAHAHRGESTRQQTRCPQCDQ
Ga0075418_110948571	3300009100	Populus Rhizosphere	MGAAEVISFEEVRARKQWSTLRQQLHERFDQWLDTLEQAWHELPATLSEVTATVWDLRQPLTGGITETIVAHTHVGERQRQQASCPRC
Ga0075418_123007331	3300009100	Populus Rhizosphere	MGAAEVISFEEVRARKQWDTLRQQLHERFDHWLDTLEKQWHEPPSTLMEITATVWDLRQQLTGGLTETIVAHVHRGEHDRTQIPCPKCNGVL
Ga0105247_117655971	3300009101	Switchgrass Rhizosphere	VFEEVRARKQWDTLRQQLHARFDQWLDTLEAQWHEPPATLPAITATVWALRQQLTGGLTEALVAHVHRG
Ga0075423_123210472	3300009162	Populus Rhizosphere	MGAAEVIAFEEVRARKQWDALRGQLPTRFAQWRDRLEAQLQAPAPTVAQVTETVWHLRQERTGGLPETRVAHAQRGAST
Ga0105252_102023962	3300009678	Soil	MGAAEVIAFEEVRASKQWSTLRQQLHERFDQWLDTLETQWREPPSTLPEVTATVWALRQQLTGGITETMVKQAHEGERQRTQTCCP
Ga0105086_1180162	3300009796	Groundwater Sand	MGAAEIISLEEVHARKQWDTLRHQLHERFDQWLDTLETQWPEPPASLPEMTATVWDLRQQLTGGITEAIVAHVHRGEHDRTQGNCPRCDGVLRAQ
Ga0105066_10228581	3300009822	Groundwater Sand	MGAAEVIAFEEVRARKQWDALRRQLPTHFDQWLDGLEAQLQEPAPTLAQVTETVLNLRQVLTGGLTQTIIEHTHLGEHIRKQVPCPKCARILQARSPVQRT
Ga0126313_105505282	3300009840	Serpentine Soil	MGAAEVLSFEEVRARKQREALRQELHTRFDEWLDRLEIQLPGSAPTLAQVTETVWNLRYALTGGLPETIVEHTHREEYTRQQTHCAQCGRLLTARAHV
Ga0105074_11086061	3300010029	Groundwater Sand	MISREEVRARKPWDTLRHQLHERFDPWLDTLETPWHEPPATFPEMTATVWNVRQQLTGGLTEAIVAHVHRGEHDRTPGNGPRGDGVLRAQELVCRTV
Ga0126304_100956902	3300010037	Serpentine Soil	MGAAEVIPFEEVRARKQWDALRGQLHTRFDQWLDALEGRLQEPAPSLAQVTETVWHLRQALTGGLTEVIVEHTHRSE
Ga0126315_112589922	3300010038	Serpentine Soil	MGAAEVISFEEVRARKQWDALRHQLHDRFDQWLDSLEAQLQEPVPTLAQVTETVWNLRQALTGGLTETIVEHTHRDEHTRQQNRVSLQ*
Ga0126308_109758631	3300010040	Serpentine Soil	MGAAEVLSFEEVRARQQWDALRHQLHERFDQWLDGLEEQLHEPKPTLAQVTETVWNLRHALTGGMTEPIVAHVHQGEDTRKQVHCPQCNGRLMARAPVPRTVETMVGSV
Ga0126314_115205701	3300010042	Serpentine Soil	MGAAEVIAFEEVRARKQWDTLRHQLHARFDQWLDTLETQWHKPPSTLPEVTATVWALRYQLTAGITETIVTQVHEGERQRT
Ga0126380_122259372	3300010043	Tropical Forest Soil	MGAAEVIAFEEVRTRKQWDTLRHQLHERFDQWLDTLETQWHEPPSTLPEVTATVWALRQQLTGGIAETIVAHVHRGEHDRYQAT
Ga0126384_108613621	3300010046	Tropical Forest Soil	MGAAEVIAFEEVRARKQWDSLRHQLHERFDQWLDTLETQWHEPPSTLPEVTATVWALRQQLTGGITETIVTQAHEG
Ga0126373_117229161	3300010048	Tropical Forest Soil	MGAAEVISFEEVRARKQWSTLRYQLHERFDQWLDTLEQAWHEPPATLSEVAATVWDLRQQLTGGITEAIVAHAHE
Ga0127444_10562841	3300010113	Grasslands Soil	MGAAEVIAFEEVRASKQWSTLRHQLHERFDQWLDTLETQWHEPPATLPEMTATVWNVRQQLTGGITEAIVAHVHR
Ga0134088_106123681	3300010304	Grasslands Soil	MGAAEVISFEDVRARKQGDALRGQLHTRFDQWLDALEAQLKEPAPSLAQVTETVWNLRQALTGGLTEARVEHAPRGAHTRQQRHCPQCERLLTARAPVK
Ga0126376_130684591	3300010359	Tropical Forest Soil	VGCAEIIALAEVRASKQWEVLRQQLHERFDQWLDTLEQRWPEPPSSLPEVTATVWNVRQQLTGSIRETIVAHVHQSEHDRQQASCTRCEGVLRARAFVCRTVDTL
Ga0126372_124303711	3300010360	Tropical Forest Soil	VGCAEVISFDEVRARKPWSLLRQQLHERFDPWLDTLEQAWHEPPSTLMEVTVTVWDVRQQLTGGLTETIVKHAHEGECQRKQASYPRCARVLKAQDRVWRTIETMVGPVSWSAPISIAALVARLYPL
Ga0126379_119662231	3300010366	Tropical Forest Soil	MGAAEVISFEEVRARKQWDTLRQQLHARFDQWLDTLEQQWHEPPSTLMEVTATVWDLRQQLTGGLTETIVKHAHEGERQR
Ga0126379_129996032	3300010366	Tropical Forest Soil	MGAAEIISFEEARARKQWAAWRRQLHARCDQWLDGLEAQLQEPAPTLAQVTETVWKLRQELTGGLTQTILAHAHAGEQSR
Ga0126348_10903071	3300010862	Boreal Forest Soil	MGAAEVISFEEVRARKQWDALRRQLHTHFDQWLDGLEAQLQEPAPTLAQVTETVWNLRQELTGGLTQTIIEHTHLGEHIRKQVPCPKCARILQARSPVQRTV
Ga0137392_101397101	3300011269	Vadose Zone Soil	MGAAEVISFEEVRARKQWDALRHQLHDRFDQWLDGLQEQLPEPEPTLAQVTETVWNLRHALTGGLTETIVAHAHQGEYTRKQANCPQCDRLVTAR
Ga0137392_107729101	3300011269	Vadose Zone Soil	KSGQEPTNPVKPQGERHFILPHEESPMGAAEIISFEEVRARKQWEALRQELHTRFDEWLAGLEALRQALTGGLTKTIVEHAHRGEAHVEFQGRNGSSLA*
Ga0137383_106375161	3300012199	Vadose Zone Soil	MGAAEVISFEEVRARKQWDALRHQLHDRFDQWLDGLEAQLQEPEPTLTQVTETVWNLRHALTGGLTETIVAHTHRNEYTRKQVKCPQCD
Ga0137382_107489981	3300012200	Vadose Zone Soil	MGAAEVIAFEEVRARKQWDTLRHQLHERFDQWLDTLETQWHEPPATLPEMTATVWNLRQQLTGGITEAIVAHVHRGEHDRPQVNCPRCDGV
Ga0137362_108758891	3300012205	Vadose Zone Soil	MGAAEVISFDEVRARKQWNSLRQQLHERLDQWLDTLEQQWHEPPSTLSEMTTTVWDLRQQLTGGITETIVQYTYAGERQRKQASCPRCARV
Ga0137362_112034522	3300012205	Vadose Zone Soil	MGAAEVISFEEVRASKQWSTLRHQLHERFDQWLDTLAQTWHEPPAMLSEVTATVWALRQQLTGGITETIVAHAHAGERQRQQASCPRCA
Ga0137380_100299784	3300012206	Vadose Zone Soil	MGAAEVISFEEVRARKQWDTLRQQLHKRFDPWLDTLEQQWHEPPSTFTEVTTTVWDLRQQLTGGLTETIVAHSSRGEHCRGSLSWCVSNSRTVFLPA*
Ga0137381_108697762	3300012207	Vadose Zone Soil	MGAAEVISFEEVCARKQWDARRGQLPTRFDQWLDGLEAQLQAPVPTLAQVTEAVWNLRQELTGSRTETIIAHAH
Ga0137377_108046331	3300012211	Vadose Zone Soil	MGAAEIISFEEVRARKQWSTLRQQLHKRFDQWLDTLEQQWHEPPSTLTEVTATVWDLRQQLTGGITETIVAHVHRGAHDCTQVTCPRCDGMLRARERVCRTVETMVGPVQLE
Ga0150985_1012163904	3300012212	Avena Fatua Rhizosphere	MGAAEVISFEEVRARKQWRTLRQQLHERFDQWLDTLEQAWHEPPTTLSEVTATVWDLRQQLTGGLTETIVAHAHEGERQRQQASCPQCARVLKVQEQAFR*
Ga0134033_11201772	3300012383	Grasslands Soil	MGAAEVISFEEVRARKQWDALRHQLHDRFDQWLDGLEAQLQEPEPTLTQVTETVWNLRHGLTGGLTETIVAHTHRNEYTRKQVKCPQCDWLLTARAPVPRTVE
Ga0134054_10615421	3300012390	Grasslands Soil	MGAAEVIAFEEVRARKQWDALRGQLHTRFDQWLDGLEAQLREPVPTLAQVTETVWNLRQELTGGLTETIVAHAHRGESTRQQTRCPQCDRCLQARAPVSRTVE
Ga0134043_12897332	3300012392	Grasslands Soil	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDALEAQLQEPVPSLAQVTETVWNLRQALTGGLTE
Ga0134057_13454701	3300012396	Grasslands Soil	MGAAEVISFEEVRARKQWDALRHQLHDRFDQWLDGLEAQLQEPEPTLTQVTETVWNLRHGLTGGLTETIVAHTHRNEYTRKQVKC
Ga0134055_10832642	3300012401	Grasslands Soil	MGAAEVISFEEVRARKQWDTLRHQLHERFDQWLDTLETQWHEPPTTLPEMTATVWHLRQQLTGGITEAIVAHVHRGEHDRTQVNCPRCDGVLRAQECV
Ga0134041_13269841	3300012405	Grasslands Soil	MGAAEVISFEEIRARKQWGTLRHQLHERFDQWLDTLETQWHEPPATLPEMTATVWNVRQQLTGGITEAIVAHVHRGEHDRIHVNCPRCDGVLRAQEFVW*
Ga0134053_13178331	3300012406	Grasslands Soil	MGAAEVIAFEEVRASKQWDALRGQLHTRFDQWLDGLEAQLREPVPTLAQVTETVWNLRQELTGSLTETIVAHAHRGESTRQQTRCPQCDRCFTARAPVSRTVETMV
Ga0150984_1045694002	3300012469	Avena Fatua Rhizosphere	MGAAEVIAFEEVRARKQWDTLRHQLHERFDQWLDTLETQWPEPPSPLPEVTATVWALRQQLTGGITETIVQQAHER*
Ga0150984_1045697501	3300012469	Avena Fatua Rhizosphere	MGAAEVIAFEEVRARKQWDTLRHQLHERFDQWLDALETQWHEPPTTLPEVTATVWALRQQLTGGLTETIVAHVHRREHERQQATCPRCHRVLRMRDLVCRTVE
Ga0157329_10087001	3300012491	Arabidopsis Rhizosphere	MGAAEVISFEEVRARKQWSTLRQQLHERFDQWLDTLEQAWPEPPATLSEVSATVWDLRQQLTGGITETIVAHAHEGERQRQ
Ga0157314_10565341	3300012500	Arabidopsis Rhizosphere	MGAAEVIAFEEVRARKQWDALRGQLHTRFDQWLDGLEAQLQEPAPTLAQVTETVWNRRQELTGGVTATIVAHAHRGASTRQQTRGPQGDRGLQARAPVSRPVATLVGPGQMARP*
Ga0137395_106437301	3300012917	Vadose Zone Soil	MGASEVISCEEVRARKQWDALRYQLYDRFDQWLDGLETQLQAPEPTLAQVTETVWNLRHALTGGLTETIVAPTHRTNTLASRSTVRSVTGS*
Ga0137395_111702801	3300012917	Vadose Zone Soil	MGCAEVISLTEVRASKQWDARRQQLHQRFDQWLDTLEQQLHESSPTLAQVSDTVWGLRYSHTGATTETIVTKAHEGERQRTQARCPRCTRVLKVQDHVGRTVETMVGPVEL
Ga0137395_112489141	3300012917	Vadose Zone Soil	MGAAEGSAFEEVRARKQWATLRHQLHERFDQWLDTLETQWHEPPSTFPEVTATVWALRQQLTGGITETIVQQAHEGERQRTQAHCPK
Ga0137416_112985362	3300012927	Vadose Zone Soil	MGAAELISLDEVRARKQWESLRQQLHACFDQWLDRREEQLPESEPTLAAVTKTVWNLRQALTGSLTETMIAHVHRGEHTRP
Ga0137410_106866202	3300012944	Vadose Zone Soil	MGAAEVISFEEVRAKKQWDALRRQLHTRFDQWLDGLEAQLQKPVPTLAQVTKTVWNLRQGLTGSL
Ga0126375_105847981	3300012948	Tropical Forest Soil	MGAAEVISFEEARARKQWGALRGQLHTRFDQWLDGLEAQRREPAPTLAQVTETVWNLRQELTGGLTETLVAHAHR
Ga0126375_113819472	3300012948	Tropical Forest Soil	VGCAEIIALAEVRASKQWEVLRQQLHARFDQWLDTLEQQWPEPPSSLPEVTATLWNVRQQLTGSITETIVAHVHQSEHDRQQAPCTRCEGVLRARAFVCRT
Ga0164303_109580362	3300012957	Soil	MGAAEVISFEEVRASKQWSTLRQQLHERFDQWLDTLEQAWHEPPATLSEVTATVWDLRQQLTGGLTETIVAHAHEGERQRQQASCPQCARVLKVQEQAFR*
Ga0164302_109099421	3300012961	Soil	MGAAEVIAFEEVRARKQWDTLRHQLHERFDQWLDTLETQWHEPPATLPEMTATVWNLRQQLTGGITEAIVAHVHRGEHDRTQVNCPRCDGVL
Ga0126369_101626863	3300012971	Tropical Forest Soil	MGAAEVISFEEVRARKPWDTLRQQLPARSAHWLDTLEQQWHEPPSPLLEVTATVWDVWQQRTGGLPATIGKQAHEGERQRQQASGPRCARVLKAQEHVWRTVETRVGPVALERPYC*
Ga0134087_107284791	3300012977	Grasslands Soil	MGAAEVISFEEVRARKQWEALRHQLHDRFDQWLDSLEAQLQEPVPTLAQVTETVWNLRQALTGGLTETITEHTHRDEH
Ga0157380_104805582	3300014326	Switchgrass Rhizosphere	MGAAEVIAFEEVRASKQWDTLRHQLHERFDQWLETLETQWHEPPATLPEVTATVWALRQQLTGGLTETIVAHVH
Ga0180084_10957622	3300014874	Soil	MGAAEVIAFEEVRARKQWDTLRHQLHERFDQWLDTLQTQWHEPPSALPEVTATVWALRQQLTGGITETIVAHVHRGEHD
Ga0132256_1021908771	3300015372	Arabidopsis Rhizosphere	MGAAEVISFEEVRARQQWDTLRQQLQARFDPWRDTLEPQWHKPPSTLMEVSAMVGDWRQQLPGGLPETIVQYAHEGEGQRQQASCPRCARVLQVPEQVWRTFETLVGPV
Ga0132256_1028805631	3300015372	Arabidopsis Rhizosphere	MGAAEVIAFEEVRARKQWDALRGQLHTRFDQWLDGLEAQLQEPAPTLAQVTETVWNRRQELTGSLTETIVAH
Ga0132257_1000853051	3300015373	Arabidopsis Rhizosphere	MGAAEVIAFEEVRARKQWDALRGQLHTRFDQWLDGLEAQLQEPAPTLAQVTETVWNRRQELTGRLTETIVAHAQRGESTRPQTRCPQCDRVLQARA
Ga0182041_105222811	3300016294	Soil	VGCAEIIALSEVRASNQWEVLRHQLHERFDQWLDTLEQQWPEPPSTLPEVTATVWNIRQQLTGSITETIVAHVHHSEHARQQAPCTRCAGVLRARAFVGRTVDTLVGPVQLERPY
Ga0182033_111828862	3300016319	Soil	MGAAEVISFEEVRARKQWDTLRQQLHARFDHWLDTLEQQWHEPPSTLMEVTATVWDMRQQLTGGLTETIVKHAHEG
Ga0182033_116570332	3300016319	Soil	MGAAEVIACEEVRARKQWDALRRQLHTRFDQWLDALEAQLQAPAPSLAQVTETVWHLRQALTGGLTETRVEQAHQGEHTRQQSRCPQCARLLPARDPVRRTVEHLFPAWKGEHSVILTAH
Ga0182040_103465191	3300016387	Soil	MGAAEVIAFEEVRARKQWATLRHQLHERFDQWLDTLETQWHEPLATLPEVTATVWAFRQQLTGGITETIVQQAHEDERQRTQVCCPKCPRMLFAYWAGS
Ga0182037_109935242	3300016404	Soil	VGCAEIIALSEVRASKQWEVLRHQLHERFDQWLDTLEQQWPEPPSTLPEVTATVWNIRQQLTGSITETIVAHVHHSEHARQQAPCTRCAGVLRARAFVGRTVDTLVGPVQLERPYF
Ga0182038_119504952	3300016445	Soil	MGAAEVISFEEVRARKQWSTLRQQLHERFDQWLDTLEQAWHEPPATLSEVTATVWDLRQPLTGGITETIVAHTH
Ga0184604_103172801	3300018000	Groundwater Sediment	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDALEAQLQEPAPSLAQVTETVWNLRQALTGGLTETIVEHAHRGEHTRQQSRCPQCDRLLKARAPVQRTVET
Ga0184605_105033422	3300018027	Groundwater Sediment	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDALEAQLQEPAPSLAQVTETVWNLRQALTGGLTETIVEHAHRGEHTRQQSRC
Ga0184626_103544281	3300018053	Groundwater Sediment	MGAAEVIAFEEVRARKQWSTLRQQLHERFDQWLDTLEQRWHEPPSTLTEVTATVWDLRQQLTGGITETIVAQGHRREHDRTEVACSRCT
Ga0187765_108153791	3300018060	Tropical Peatland	MGAAEVISFEEVRARKQWDTLRQQLHERFDKWLDTLETQWHEPPTTLPEMTATVWNVRQQLTGGITEAIVAHGHRGEHDRTQVNCPRCDGMLRAQ
Ga0190265_114165141	3300018422	Soil	MGAAEVIAFEEVRARKQWSTLRQQLHQRFDQWLDTLEQRWHEPPSTLTEVTATVWDLRQQLTGGITETIVAHVHRGEHDRTQVTC
Ga0066667_118194971	3300018433	Grasslands Soil	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDELEAQLQEPAPSLAQVTEAVWNLRQALTGGLTETIVEHAHRGEHTRPQSRCPQCARLLTARDPV
Ga0066669_116858291	3300018482	Grasslands Soil	MGTAEIISFEEVRARKQWDTLRQALHTRFDEWLDRLEIQLPGAAPTLAQVTETMWNLRQALTGGLTETIVKHTQGG
Ga0184648_14291092	3300019249	Groundwater Sediment	MGAAEVISFEEVRTRKQWDTLRRQLHTHFDQWLDGLEAQLQEPAPTLAQVTETVWNLRQELTGGLTQTIIEHTHLGEHIRKQ
Ga0194110_103054442	3300020084	Freshwater Lake	MGAAEVIVFEEVRASKPWRILRHQLHERFDHWLDTREQTWHEPPATLAEVTATVWDLRQQLTGGITETIVAHAHAGERQR
Ga0194131_101533981	3300020193	Freshwater Lake	MGAAEVIVFEEVRASKPWRILRHQLHERFDHWLDTREQTWHEPPATLAEVTATVWDLRQQLTGGITETIVAHAHAGERQRQQASCPKCARGLTVQAHVG
Ga0207684_109807442	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MGAAEVISFEEVRASKQWDTLRHQLHERFDQWLDTLETQWHEPPATVPEMTATVWHLRQQLTGGITEAMVTHVHRGEHDR
Ga0207676_114631922	3300026095	Switchgrass Rhizosphere	MGAAEVIAFEEVRARKQWDTLRQQLHARFDQWLDTLEQQWHEPPSTLMEVTATVWALRQQLTGGLTETIVAHAHRGEHDRH
Ga0209687_12888001	3300026322	Soil	MGTAEIISFEEVRARKQWDTLRQALHTRFDEWLDRLEIQLPGAAPTLAQVTETMWNLRQALTGGLTETIVKHTQGGEYTRQQTSCAQCGRLLTAHAHVAR
Ga0209152_105033212	3300026325	Soil	MGAAEVIAFEEVRARKQWDALCGQLHTRFDQWLEGLEAQLRAPAPTLAQVTETVWNLRQELTGSLTETIVEHPHRGESTR
Ga0209804_11092401	3300026335	Soil	MGAAEVIAFEEVRASKHWDTLRHQLHECFDQWLDTLETQWHEPPATLPEMTATVWNLRQQLTGGITEAIVAHVHRGEHDRIHVNCPRCDGVLRAQEFVCRTVETMVG
Ga0209376_12049332	3300026540	Soil	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDALEAQLQEPAPSXAQVTETVWNLRQALTGGLTEARVEH
Ga0208710_1075831	3300026790	Soil	MGAAEVIAFEEVRARKQWDTLRHQLHERFDQWLDSLETQWHEPPSTFPEVTATVWALRQQLTGGIAETIVAHVHRGEHDR
Ga0209896_10282902	3300027006	Groundwater Sand	MGAAEVISFEEVRARKQWDALRHQLHDRFDQWLDGLQEQLPEPAPTLAQVTETVWNLRHALTGGLTEAIVEHAHRGEHTRQQSRCPQCDRLLKAR
Ga0209515_103713591	3300027835	Groundwater	MGCAEMISLPEVRARKQWDALRQQLHARFDQWLDGLEEQFQEPEPTFAAVTEIVWTLRQALTGGLTETIVEHAYLGEHTRKQVNC
Ga0209180_101003801	3300027846	Vadose Zone Soil	MGAAEVISFEEVRARKQWDALRHQLHDRFDQWLDGLQEQLPEPEPTLAQVTETVWNLRQALTGGLTEAIVEHAHRGEHTR
Ga0209382_120443121	3300027909	Populus Rhizosphere	MGAAEVIAFKEVRARKQRDAPRRQLHTRFDQWLDALEAQLPEPAPSLAQVTETVWNLRQALTGGLTETIVEHAHRDEHTRQQSRCPQCARLLPARAPVRR
Ga0299907_102234381	3300030006	Soil	MGQAEVISLSEVRARKQWTSLRHQLHDRFDQWLDRLEAQLPEPETTLAQVTETVWSLRQDLTGGLTESLVEHAHQVELTRKELPCATCDRLLSAR
Ga0247647_10392491	3300030570	Soil	MGAAEVISFEEVRASKQWDALRGQLHTYFDQWLDGLEAQLRKSAPTLAQVTEIVWNQRQELTGGLTETIVAHAHRGESTRQQTRCPQCDRFLKARAPVSRTVATMVGAVQIE
Ga0308202_10828211	3300030902	Soil	VCARKPWDALRHQLHDRFDQRLEGLEARLQEPEPTLAQVTETVWNLRHALTGGLTETTVAPTHRNEYTRKQVNCPQCDWLLTARAPVSRTVETMVRPV
Ga0308189_102992322	3300031058	Soil	MGAAEVIAFEEVRARKQWDTLRHQLHERFDQWLDTLETQWHEPPSTLPEVTATVWALRQQLTGGITETIVAHVHRGEHDRPHATCPRCNGGLRARDLVCRTVE
Ga0307497_100546031	3300031226	Soil	VGYPEVISLPEVRASKQWEALRQQLHVRFDQWLDTLEQQWHEPPSTLAEVTATVWDLRQQLTGGITETIVTHVHRSEHDRTQAHCPQCDGR
Ga0308186_10301671	3300031422	Soil	MGAAEVISFEEVRARKQWDALRGQLHTRFAQWLDELEAQLQEPAPSLAQVTETVWNLRQALTGGLTETIVEHAHRSEHTQQQSRCSQCD
Ga0318538_107485081	3300031546	Soil	MGAAEVIAFEEVRARKQWDTLRHQLHERFDQWLDTLETQWHEPPSTLPEVTATVWALRQQLTGGITETIVQQAHEGERQRTQARCPKCTRLTF
Ga0310886_102344302	3300031562	Soil	MGAAEVIAFEEVRARQQWDTLRQQLHARFDQWLDTLEQQWHEPPSTLMEVTATVWALRQQLTGGLTETIVAHVHRGEHDRHQIP
Ga0310915_109149041	3300031573	Soil	VGCAEIIALAEVRASKQWEVLRQQLHARFDQWLDTLEQQWPEPPSSLPEVTATVWNVRQQLTGSITETIVAHVHQSEHDRQQASCTRCEGVLRAR
Ga0307468_1023996002	3300031740	Hardwood Forest Soil	MGAAEVISLEEVRARKQWDALRGQLHTRFDQWLDALEAQLQEPAPSLAQVTETVWNLRHALTGGLTETIVEHAHRGEHTRQQSRCPQCDRFLTARAPVQRTVET
Ga0306918_113979092	3300031744	Soil	MGAAEVIAFEEVRARKQWDTLRHQLHERFDQWLDTLETQWHEPPSTLPEVTATVWALRQQLTGGITETIVQQAHEGERQRTQARCPKCTR
Ga0318497_104976752	3300031805	Soil	VGCAEIIALSEVRASNQWEVLRHQLHECFDQWLDTLEQQGPEPPSSLPEVTATVWNVRQQLSGSSTETIVAHVH
Ga0310917_110806971	3300031833	Soil	MGAAEVIACEEVGARKPWSPLRQQLHERFDQGLDSLEQRWHEPPSTLTEVTATVWDLRQQRTGGITETIVAQVHRRAHDRTQGACARWTGVLRARALGWRTVETLGGPVQ
Ga0307410_111804732	3300031852	Rhizosphere	MGAAEIIAFEEVRASKQWDALRRQLHTRFDQWLDELEAQLHEPAPTLAQVTETVWHLRQALTGGLTETLVEHTHQGEHTR
Ga0306919_110392342	3300031879	Soil	MGCPEVISLPEVRARKPWDTLHHQLHERFDRWLDTLETQWHEPPATLPEVTATVWALRQQRAGGLTETIVAHVHREEYDRQQATCPRWQRVLRRRDRVCRTVATMVGAIELERPYCYCRVCREGV
Ga0306925_104513102	3300031890	Soil	MGAAEIISFEEVRARKQWDALRRQLHARFDQWLDGLEEQLQEPEPTLAQVTETVWNLRHALTGGLTETIVAHAHQGEYTHKQVHCPQCDCRLTARAPVP
Ga0310900_103215863	3300031908	Soil	MGAAEVIAFEEVRARKQWDALRGQLHTRFDQWLDALEAQLQEPTPSLAQVTETVWNLRQALTGSLTATIVEHAHRGEHTRQQSRCPRCDRVL
Ga0306923_103179873	3300031910	Soil	VGCAEIIALAEVRASKQWEVLRQQLHARFDQWLDTLEQQWPEPPSSLPEVTATVWNVRQQLTGSSTETIVAHVHQSEHDRQQAPCTRCEEVLRARAFVCRTVDTLVGPVQ
Ga0306921_122011651	3300031912	Soil	MEAAEVIAFEDVRARKQWATLRHQLHERFDQWLDTLETQWHEPPATLPEVTATVWAFRQQLTGGITETIVQQAHEDERQRTQVCCPKCPRMLFAYWAGS
Ga0310884_110271022	3300031944	Soil	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDRLEAQLQEPAATLAQVTETVWNLRQELTGGLTETIVAHAHRGESTRQQTRCPQC
Ga0306926_103772051	3300031954	Soil	VGCAEIIALAEVRASKQWEVLRQQLHARFDQWLDTLEQQGPEPPSSLPEVTATVWNVRQQLTGSSTETIVAHVHQSEHDRQQAPCTRCEEVLRARAFVC
Ga0307416_1020886162	3300032002	Rhizosphere	MGAAEVIAFEEVRARKHWDTLRQQLHARFDHWLDTLAQQWHEPPSTLMEVTATMWALRQQLPGGLTETIVKHAHEGERQRTQASCPRCAR
Ga0318507_103863652	3300032025	Soil	VGCAEIIALAEVRASKQWEVLRQQLHARFDQWLDTLEQQWPEPPSSLPEVTATVWNVRQQLTGSITETIVAHVHQSEHDRQQAPCTRCEEVLRARAFVCRTVDTLVGPV
Ga0318504_104752012	3300032063	Soil	MGCPEVISLPEVRARKPWDTLHHQLHERFDRWLDTLETQWHEPPATLPEVTATVWALRQQRAGGLTETIVAHVHREEYDRQQATCPRWQRVLRRR
Ga0306924_124675671	3300032076	Soil	MGAAEVLAFEEVRASKQWDTLRQQLHARFDHWLDLLEQQWHAPPSTLLEATATVWALRQQLTGGLTETIVTYAHEGECQ
Ga0306924_124840971	3300032076	Soil	MGAAEVISFEEVRARKQWSTLRQQLHERFDQWLDTLEQAWHEPPATLSEVTATVWDLRQPLTGGITETIVAHTHGGERQRQQASCPRC
Ga0268251_101351121	3300032159	Agave	MGAAEVIAFEEVRTRKQWDTLRHQLHERFDQWLDTLETQWHEPPSTFPEVTATVWALRQQLTGGIAETIVAHVHRGEHDRHQATCPRCHEGLRARDLVCRTVETMGGQCSLSGPISMVGL
Ga0307472_1013252832	3300032205	Hardwood Forest Soil	VGCAEIIALAEVRASKQWEVLRQQLHERFDQWLDTLEQQWPEPPSSLPEVTATVWNVRQQLTGSIAETIVTHVHQSEHDRQQAPCPRCE
Ga0306920_1031466691	3300032261	Soil	MGAAEVISFEEVRARKQWDALRHQLHDRFDQWLDGLEAQLQEPAPTLTQVTETVWHLRQALTGGLTETLVAHAHQSEYTRKQSPCPQCNCLLTAR
Ga0310914_117863821	3300033289	Soil	MGAAEIISFEEVRARKQWDALRRQLHARFDQWLDGLEEQLQEPEPTLAQVTETVWNLRHALTGGLTETIVAHAHQGEYTH
Ga0364935_0187431_313_663	3300034151	Sediment	MGCAAEVISLDEVRTRKQWASLREQLHIRFDRWLDQLESHLQEPAPTLAAVTDTVWHLRQDLTGGLSETIINHAHGTELQRQQSRCPQCERLLHARAPVARTIDTMVGSIELERPYF
Ga0364935_0303827_1_264	3300034151	Sediment	MGTAEVISFEEVRARKQWSTLRQQLHERFDQWLDTLEQRWYEPPSTLTEVTATVWDLRQQLTGGITETIVAQVHRGEHDRTQVACSRC
Ga0314781_072670_1_345	3300034660	Soil	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDGLEEQLRKPTPTLAQVTETVWNLRQELTGGLTETIVAHAHRGESTRQQTRCPQCDRCLKARAPVSRTLETMVGAVQIERPY
Ga0314795_056856_161_433	3300034670	Soil	MGAAEVIAFEEVRARKQWDALRGQLHTRFDQWLDGLEEQLRKPTPTLAQVTETVWNLRQELTGGLTETIVAHAHRGESTRQQTRCPQCDR
Ga0314796_157930_1_315	3300034671	Soil	MGAAEVISFEEVRARKQWDTLRQQLHERFDHWLDTLEKQWHEPPSTLMEITATVWDLRQQLTSGLTETIVAHGHRGEHDRKQIPCPKCDGVLKARERVCRTVETM
Ga0314799_037526_329_562	3300034674	Soil	MGATEIIVFEEVRASKQWDTLRQQLHARFDQWLDTLEQQWHEPPSTLMEVTATVWALRQQLTGGLTETIVAHVHRGEH
Ga0314801_117207_268_612	3300034676	Soil	MGAAEVISFEEVRARKQWDALRGQLHTRFDQWLDGLEEQLRKPTPTLAQVTETVWNLRQELTGGLTETIVAHAHRGESTRQQTRCPQGDRCLKARAPVSRPLETMVGAVQIERPY
Ga0314801_173578_2_307	3300034676	Soil	MGAAEVISFEEVRARKQWDTLRQQLHERFDHWLDTLEKQWHEPPSTLMEVTATVWALRQQLTGGLTETIVAHGHRGEHDRKQIPCPKCDGVLKARERVCRTV
Ga0314803_036000_3_266	3300034678	Soil	MGAAEVISFEEVRARKQWSPLRQQLHERFDQWLDTLERAWPEPPATVSEVTATVWAWRQQLTGGLTETIVAHAHEGERQRQQARCPKC
Ga0314803_094585_1_291	3300034678	Soil	MGAAEVIAFEEVRARKQWDALRGQLHTRFDQWRDGWEEQLRKPPPTLAPGTETVWNLRQELTGGLTETRVAHAHRGESTRQQTRCPQGDRCLKARAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F037643

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences