Metagenome / Metatranscriptome Family F037615

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F037615
Family Type	Metagenome / Metatranscriptome
Number of Sequences	167
Average Sequence Length	73 residues
Representative Sequence	MKTLTTARTIVLVFSLIALATPSQAAQKTKARDNGASLEQKCHELVGKEEREGEGRGHIGQFQVQRFSDCMMGMPH
Number of Associated Samples	111
Number of Associated Scaffolds	167

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.43 %
% of genes near scaffold ends (potentially truncated)	24.55 %
% of genes from short scaffolds (< 2000 bps)	91.62 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.287 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.168 % of family members)
Environment Ontology (ENVO)	Unclassified (30.539 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.102 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 57.69% β-sheet: 0.00% Coil/Unstructured: 42.31%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 167 Family Scaffolds
PF08241	Methyltransf_11	5.99
PF12802	MarR_2	4.19
PF03466	LysR_substrate	3.59
PF00440	TetR_N	1.20
PF04229	GrpB	1.20
PF01799	Fer2_2	1.20
PF00126	HTH_1	1.20
PF03401	TctC	0.60
PF00873	ACR_tran	0.60
PF13561	adh_short_C2	0.60
PF02582	DUF155	0.60
PF00581	Rhodanese	0.60
PF08281	Sigma70_r4_2	0.60
PF12695	Abhydrolase_5	0.60
PF00353	HemolysinCabind	0.60
PF03480	DctP	0.60
PF04542	Sigma70_r2	0.60
PF00535	Glycos_transf_2	0.60
PF13532	2OG-FeII_Oxy_2	0.60
PF02463	SMC_N	0.60
PF07731	Cu-oxidase_2	0.60
PF13463	HTH_27	0.60
PF16694	Cytochrome_P460	0.60
PF01047	MarR	0.60
PF00132	Hexapep	0.60
PF03358	FMN_red	0.60

COG ID	Name	Functional Category	% Frequency in 167 Family Scaffolds
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	1.20
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.60
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.60
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.60
COG1723	Mitochondrial translation protein, Rmd1/RMND1/DUF155 family	Translation, ribosomal structure and biogenesis [J]	0.60
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.60
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.60
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.29 %
All Organisms	root	All Organisms	43.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.29 %
cellular organisms	root	All Organisms → cellular organisms	43.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.29 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	28.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.29 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	24.55 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.38 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.20 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.29 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.19 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.20 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.20 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1.20 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.20 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.29 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.99 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	1.20 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.20 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.20 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.20 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.29 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.40 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	1.20 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	1.20 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.20 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.20 %
unclassified Afipia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia	0.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.29 %
Bradyrhizobium sp. LTSPM299	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSPM299	2.40 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1.20 %
Mesorhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	1.20 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.20 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.20 %
Afipia sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp.	0.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|FZY7DQ102GZPEB	Not Available	501	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100861264	All Organisms → cellular organisms → Bacteria	1267	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100861901	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100864123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1176	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105063038	Not Available	696	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105723831	Not Available	713	Open in IMG/M
3300000732\|JGI12023J11887_1005870	Not Available	698	Open in IMG/M
3300000858\|JGI10213J12805_10341947	Not Available	504	Open in IMG/M
3300000858\|JGI10213J12805_10512353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	712	Open in IMG/M
3300000956\|JGI10216J12902_101091297	All Organisms → cellular organisms → Bacteria	1907	Open in IMG/M
3300001661\|JGI12053J15887_10039766	All Organisms → cellular organisms → Bacteria → Proteobacteria	2642	Open in IMG/M
3300002568\|C688J35102_118430752	Not Available	559	Open in IMG/M
3300002568\|C688J35102_120874838	Not Available	1949	Open in IMG/M
3300003579\|Ga0007429J51699_1071976	Not Available	501	Open in IMG/M
3300003911\|JGI25405J52794_10137986	Not Available	554	Open in IMG/M
3300005187\|Ga0066675_10493237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	915	Open in IMG/M
3300005332\|Ga0066388_100515975	All Organisms → cellular organisms → Bacteria	1829	Open in IMG/M
3300005332\|Ga0066388_102543059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	931	Open in IMG/M
3300005332\|Ga0066388_102889236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	878	Open in IMG/M
3300005332\|Ga0066388_103557003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	795	Open in IMG/M
3300005332\|Ga0066388_103626921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	788	Open in IMG/M
3300005332\|Ga0066388_103801463	Not Available	770	Open in IMG/M
3300005332\|Ga0066388_104620230	Not Available	701	Open in IMG/M
3300005332\|Ga0066388_105494762	Not Available	642	Open in IMG/M
3300005347\|Ga0070668_102234976	Not Available	506	Open in IMG/M
3300005435\|Ga0070714_102068471	Not Available	555	Open in IMG/M
3300005713\|Ga0066905_100187251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1533	Open in IMG/M
3300005713\|Ga0066905_100432188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1077	Open in IMG/M
3300005713\|Ga0066905_100951402	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300005764\|Ga0066903_101141614	All Organisms → cellular organisms → Bacteria → Proteobacteria	1441	Open in IMG/M
3300005764\|Ga0066903_101548605	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300005764\|Ga0066903_101971680	Not Available	1121	Open in IMG/M
3300005764\|Ga0066903_102475746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1005	Open in IMG/M
3300005764\|Ga0066903_102558493	Not Available	989	Open in IMG/M
3300005764\|Ga0066903_102697648	Not Available	964	Open in IMG/M
3300005764\|Ga0066903_105027884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	701	Open in IMG/M
3300005764\|Ga0066903_106358186	Not Available	616	Open in IMG/M
3300005764\|Ga0066903_106997347	Not Available	585	Open in IMG/M
3300005764\|Ga0066903_107773006	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300005764\|Ga0066903_107908025	Not Available	546	Open in IMG/M
3300005937\|Ga0081455_10003362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18441	Open in IMG/M
3300005937\|Ga0081455_10343319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1056	Open in IMG/M
3300005937\|Ga0081455_10521290	Not Available	793	Open in IMG/M
3300005937\|Ga0081455_10565013	Not Available	749	Open in IMG/M
3300005983\|Ga0081540_1210269	Not Available	700	Open in IMG/M
3300005983\|Ga0081540_1346474	Not Available	508	Open in IMG/M
3300006038\|Ga0075365_10097085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2014	Open in IMG/M
3300006038\|Ga0075365_10098909	All Organisms → cellular organisms → Bacteria → Proteobacteria	1996	Open in IMG/M
3300006038\|Ga0075365_10542802	Not Available	822	Open in IMG/M
3300006049\|Ga0075417_10565304	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300006844\|Ga0075428_100569313	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300006853\|Ga0075420_100539905	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300006854\|Ga0075425_100637086	Not Available	1226	Open in IMG/M
3300007788\|Ga0099795_10439056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	599	Open in IMG/M
3300009094\|Ga0111539_10474852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → unclassified Afipia → Afipia sp.	1456	Open in IMG/M
3300009143\|Ga0099792_10095042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1554	Open in IMG/M
3300009143\|Ga0099792_10386396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSPM299	853	Open in IMG/M
3300009156\|Ga0111538_12426760	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300009792\|Ga0126374_10627830	Not Available	797	Open in IMG/M
3300009792\|Ga0126374_10902224	Not Available	685	Open in IMG/M
3300010043\|Ga0126380_10288530	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp.	1160	Open in IMG/M
3300010043\|Ga0126380_10848084	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300010043\|Ga0126380_11660407	Not Available	573	Open in IMG/M
3300010043\|Ga0126380_12084053	Not Available	521	Open in IMG/M
3300010043\|Ga0126380_12300001	Not Available	500	Open in IMG/M
3300010046\|Ga0126384_10856853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	817	Open in IMG/M
3300010047\|Ga0126382_10371797	Not Available	1104	Open in IMG/M
3300010047\|Ga0126382_11368997	Not Available	644	Open in IMG/M
3300010047\|Ga0126382_11985456	Not Available	553	Open in IMG/M
3300010047\|Ga0126382_12018172	Not Available	549	Open in IMG/M
3300010336\|Ga0134071_10210971	Not Available	959	Open in IMG/M
3300010359\|Ga0126376_10516850	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300010359\|Ga0126376_11936310	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300010360\|Ga0126372_10368907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1296	Open in IMG/M
3300010360\|Ga0126372_10373023	Not Available	1290	Open in IMG/M
3300010361\|Ga0126378_12888261	Not Available	548	Open in IMG/M
3300010362\|Ga0126377_10187320	All Organisms → cellular organisms → Bacteria	1973	Open in IMG/M
3300010362\|Ga0126377_11258734	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300010366\|Ga0126379_10260027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1716	Open in IMG/M
3300010868\|Ga0124844_1092881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1140	Open in IMG/M
3300010999\|Ga0138505_100075577	Not Available	501	Open in IMG/M
3300012207\|Ga0137381_10866817	Not Available	781	Open in IMG/M
3300012209\|Ga0137379_10323994	Not Available	1451	Open in IMG/M
3300012212\|Ga0150985_111009400	Not Available	981	Open in IMG/M
3300012212\|Ga0150985_115600931	Not Available	612	Open in IMG/M
3300012356\|Ga0137371_11279689	Not Available	543	Open in IMG/M
3300012683\|Ga0137398_10298062	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300012685\|Ga0137397_10183205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1556	Open in IMG/M
3300012685\|Ga0137397_10496296	Not Available	909	Open in IMG/M
3300012924\|Ga0137413_10797193	Not Available	725	Open in IMG/M
3300012925\|Ga0137419_10989385	Not Available	696	Open in IMG/M
3300012927\|Ga0137416_11828755	Not Available	555	Open in IMG/M
3300012944\|Ga0137410_12008059	Not Available	514	Open in IMG/M
3300012948\|Ga0126375_10440952	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300015242\|Ga0137412_10209558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1554	Open in IMG/M
3300015245\|Ga0137409_10621860	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300015371\|Ga0132258_11078352	All Organisms → cellular organisms → Bacteria	2030	Open in IMG/M
3300015372\|Ga0132256_100072958	All Organisms → cellular organisms → Bacteria	3259	Open in IMG/M
3300015372\|Ga0132256_100774591	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300015373\|Ga0132257_100299757	All Organisms → cellular organisms → Bacteria	1931	Open in IMG/M
3300015373\|Ga0132257_101596342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	834	Open in IMG/M
3300015373\|Ga0132257_101962868	Not Available	754	Open in IMG/M
3300015373\|Ga0132257_102083511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	733	Open in IMG/M
3300015374\|Ga0132255_101702460	Not Available	957	Open in IMG/M
3300017997\|Ga0184610_1135532	Not Available	801	Open in IMG/M
3300018000\|Ga0184604_10078941	Not Available	978	Open in IMG/M
3300018000\|Ga0184604_10228212	Not Available	648	Open in IMG/M
3300018028\|Ga0184608_10044864	Not Available	1721	Open in IMG/M
3300018031\|Ga0184634_10475946	Not Available	560	Open in IMG/M
3300018051\|Ga0184620_10234143	Not Available	615	Open in IMG/M
3300018054\|Ga0184621_10068570	Not Available	1216	Open in IMG/M
3300018061\|Ga0184619_10035805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2113	Open in IMG/M
3300018066\|Ga0184617_1004240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2475	Open in IMG/M
3300018067\|Ga0184611_1023653	Not Available	1917	Open in IMG/M
3300018071\|Ga0184618_10101744	Not Available	1128	Open in IMG/M
3300018072\|Ga0184635_10142749	Not Available	955	Open in IMG/M
3300018073\|Ga0184624_10033364	Not Available	2002	Open in IMG/M
3300018076\|Ga0184609_10182481	Not Available	975	Open in IMG/M
3300018077\|Ga0184633_10169936	Not Available	1130	Open in IMG/M
3300018468\|Ga0066662_10106436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2004	Open in IMG/M
3300019269\|Ga0184644_1465274	Not Available	643	Open in IMG/M
3300019279\|Ga0184642_1600518	Not Available	733	Open in IMG/M
3300019866\|Ga0193756_1048416	Not Available	583	Open in IMG/M
3300019867\|Ga0193704_1025536	Not Available	1199	Open in IMG/M
3300019876\|Ga0193703_1013422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1239	Open in IMG/M
3300020002\|Ga0193730_1102470	Not Available	796	Open in IMG/M
3300020004\|Ga0193755_1108050	Not Available	876	Open in IMG/M
3300020005\|Ga0193697_1028891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1385	Open in IMG/M
3300021080\|Ga0210382_10124462	Not Available	1091	Open in IMG/M
3300022195\|Ga0222625_1255143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1151	Open in IMG/M
3300022534\|Ga0224452_1149307	Not Available	720	Open in IMG/M
3300026285\|Ga0209438_1047019	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300026550\|Ga0209474_10035270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3706	Open in IMG/M
3300026555\|Ga0179593_1057747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3111	Open in IMG/M
3300027181\|Ga0208997_1002413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2151	Open in IMG/M
3300027616\|Ga0209106_1036822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1086	Open in IMG/M
3300027903\|Ga0209488_10164210	All Organisms → cellular organisms → Bacteria	1677	Open in IMG/M
3300027909\|Ga0209382_10015969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9174	Open in IMG/M
3300027909\|Ga0209382_11039279	All Organisms → cellular organisms → Bacteria	851	Open in IMG/M
3300027909\|Ga0209382_11970369	Not Available	561	Open in IMG/M
3300028536\|Ga0137415_11364231	Not Available	529	Open in IMG/M
3300028592\|Ga0247822_10729925	Not Available	803	Open in IMG/M
3300028704\|Ga0307321_1099962	Not Available	589	Open in IMG/M
3300028708\|Ga0307295_10071910	Not Available	911	Open in IMG/M
3300028712\|Ga0307285_10023081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1445	Open in IMG/M
3300028720\|Ga0307317_10160800	Not Available	755	Open in IMG/M
3300028721\|Ga0307315_10093104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSPM299	881	Open in IMG/M
3300028722\|Ga0307319_10303073	Not Available	529	Open in IMG/M
3300028778\|Ga0307288_10215102	Not Available	744	Open in IMG/M
3300028784\|Ga0307282_10584599	Not Available	542	Open in IMG/M
3300028791\|Ga0307290_10279049	Not Available	612	Open in IMG/M
3300028793\|Ga0307299_10258264	Not Available	654	Open in IMG/M
3300028811\|Ga0307292_10112220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1079	Open in IMG/M
3300028811\|Ga0307292_10311210	Not Available	661	Open in IMG/M
3300028811\|Ga0307292_10409681	Not Available	577	Open in IMG/M
3300028819\|Ga0307296_10600626	Not Available	602	Open in IMG/M
3300028824\|Ga0307310_10238127	Not Available	870	Open in IMG/M
3300028828\|Ga0307312_10324157	Not Available	1005	Open in IMG/M
3300028875\|Ga0307289_10254467	Not Available	722	Open in IMG/M
3300030905\|Ga0308200_1148446	Not Available	540	Open in IMG/M
3300031152\|Ga0307501_10262693	Not Available	518	Open in IMG/M
3300031226\|Ga0307497_10182289	Not Available	897	Open in IMG/M
3300031226\|Ga0307497_10436216	Not Available	634	Open in IMG/M
3300031740\|Ga0307468_100046696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSPM299	2225	Open in IMG/M
3300032174\|Ga0307470_10416891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSPM299	955	Open in IMG/M
3300032205\|Ga0307472_100227521	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300032205\|Ga0307472_101035275	Not Available	772	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.44%
Host-Associated	Host-Associated	18.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.46%
Plants	Host-Associated → Plants	18.56%
Aquatic	Environmental → Aquatic	11.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.86%
Sediment	Environmental → Aquatic → Sediment	9.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.19%
Freshwater	Environmental → Aquatic → Freshwater	2.40%
Roots	Host-Associated → Plants → Roots	1.80%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.90%
Loam	Environmental → Terrestrial → Soil → Loam	17.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.58%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.39%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.19%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.40%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	1.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.80%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.19%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.40%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.20%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.60%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	8.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.99%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	4.19%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.59%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.40%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.40%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.40%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.80%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	1.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.20%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.20%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.20%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.60%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.60%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.60%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000732	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003579	Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019866	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_05937280	2170459002	Grass Soil	MRTIVLVFSLIALAAPSHAAPGTKSKVENAASTEKRCHEMVGKEQYDGEGRSHIGQFQVQRFSDCMMGY
INPhiseqgaiiFebDRAFT_1008612642	3300000364	Soil	MRTIVLAFSLIALAAPAQAAQKTHAKHNDASLEQRCRETVGKEQYEGEGRGGGRLQSQRFGECMMGMPQ*
INPhiseqgaiiFebDRAFT_1008619012	3300000364	Soil	MRTIVLAFXLIALAAPAQAAQKTHAKHNDATLEQRCREMVGKEQYEGEGRGGGRLQSQRFGECMMGMPQ*
INPhiseqgaiiFebDRAFT_1008641233	3300000364	Soil	MRTIVLAFSLIALAAPSQAAQKTHAKNNDASLEQRCREMVGKEQNDGEGRGGGRLQAQRFGECMMGTPH*
INPhiseqgaiiFebDRAFT_1050630383	3300000364	Soil	MKMLNTARTIVLXLSLTAXAAPSQAAPRNSRDNGTPLELFNALQQRCHEMVGKEEREGEGRGHIGQLQVHRFSDCMMGRP*
INPhiseqgaiiFebDRAFT_1057238311	3300000364	Soil	MKAFMTAMGVMVLEFSLIASVVPSQAAQQTKARRDGASLEQTCRDLVGKEEREGEGRSHMGQFQLQRFSDCMMGTPR*
JGI12023J11887_10058701	3300000732	Forest Soil	MNTLTTARTIVLVFSLIALAAPSQAAQRTNARDHGPSLEQKCHELVGKEEREGEGRGHIGHLQVQRFSDCMMGMPN*
JGI10213J12805_103419471	3300000858	Soil	MRTIVLVLALMALAAPSQAAQKSNARNNNGVSAEQKCRDLVGKEVSEGEGRGGQGRLQAQRFGECMMGMPH*
JGI10213J12805_105123532	3300000858	Soil	MRMIVLVFTLIALAAPSHAAPKTKAADDGASREKMCRDMVGKEQSEGEGRGGVGRLQAQRFGECMMGTPQ*
JGI10216J12902_1010912973	3300000956	Soil	MKMIVLVFSLIALAAPSHAAPTTKSRVDDAAAMEKRCHEMVGKEQYDGEGRSHIGQLQAQRFSDCMMGY*
JGI12053J15887_100397667	3300001661	Forest Soil	MRTLETNMRTIVLVLSLIALATPSHAAQRTKAGSDDAASVEKRCHEMVGKEQSEGEGRSHIGQLQAQRFSDCMMGAPH*
C688J35102_1184307521	3300002568	Soil	MNTLTTARAIVLAFSLIALAAPTEAAQRTKARDNGASLEQKCHELVGKEEREGEGRGHIGQFQVQRFSDCMMGMPN*
C688J35102_1208748382	3300002568	Soil	MKTLTTSARTIVLVFSLIALATPSQAAQKTKARDNGASLEQKCHELVGKEEREGEGRGHIGHFQVQRFSDCIMGVPN*
Ga0007429J51699_10719761	3300003579	Avena Fatua Rhizosphere	MKTLTTTARTIVLVFSLIALATPSQAAQKTKARDNGASLEQKCHELVGKEEREGEGRGHIGHFQVQRFSDCIMGVPN*
JGI25405J52794_101379861	3300003911	Tabebuia Heterophylla Rhizosphere	MRTIVLAFSLVALAAPSQAAQKTHAKXNXASLEQKCREMVGKEQNDGEGRGGGRLQAQRFGECMMGMPH*
Ga0066675_104932372	3300005187	Soil	MKMLNTARTIVLVLSLTALAAPSQAAPRNSRDNGTPLELFNALQQRCHEMVGKEEREGQGRGHIGQLQVQRFSECMMGRPFM*
Ga0066388_1005159752	3300005332	Tropical Forest Soil	MRIIVLAFSLIAFAAPSQAAQKTHARNSDASLEQRCREMVGKEQYEGEGRGGGRLQSQRFGECMMGMPH*
Ga0066388_1025430592	3300005332	Tropical Forest Soil	MRTIVLALSLVALAAPSQAAQRSHAKNSDASLEQKCREMVGKEQYEGEGRGGGRLQSQRFGECMMGM
Ga0066388_1028892361	3300005332	Tropical Forest Soil	MKAFMTAMGVMVLEFSLIASAVPSQAAQQTKARDNDASLERTCRDLVGKEEREGEGRSHMGHFQAQRFSDCMMGTPR*
Ga0066388_1035570031	3300005332	Tropical Forest Soil	MTTAGTARAIVLALSIIALANPSHAAPRTNGRDNGSSLEQRCHEMVGKEEREGEGRGHMGQLQVQRFSDCMMG
Ga0066388_1036269212	3300005332	Tropical Forest Soil	MRTIVLVLSLIVLATPIQAASKTKARADDNASQEKRCHDQVGKETSEGEGRGHIGQMQAQRFSDCMMGR*
Ga0066388_1038014632	3300005332	Tropical Forest Soil	MSVRMIVLLLSLVALAAPSQAAQRTKARDNGALLEQKCREMVGKEVSEGEGRGGAGRLQAQRFSDCMMGTEH*
Ga0066388_1046202302	3300005332	Tropical Forest Soil	LVPPHVADGLGIPAQHRRRNMRKLGTATAIVLALSVIALAAPSQAAPRTNGRSSGTSLEQKCQEMVGKEEREGEGRGHIGQFQVQRFSDCMMGRPLM*
Ga0066388_1054947621	3300005332	Tropical Forest Soil	NTARTIVLALSFLALAVPAQAAPRPQAGDHGTSLEQTCREKVGKEEREGEGRGHMGQLQVQRFSDCMMGRPY*
Ga0070668_1022349761	3300005347	Switchgrass Rhizosphere	MNTLTTARTIVLVFSLIALATPSQAAQNTKARDNGASLEQKCHELVGKEEREGEGRGHIGHFQVQRFSDCMMGTPN*
Ga0070714_1020684711	3300005435	Agricultural Soil	MRTIVLVFSLIALAAPSHAAPTTKSRVDDAPSMEKRCHEMVGKEQYDGEGRSHIGQLQAQRFSDCMMGY*
Ga0066905_1001872511	3300005713	Tropical Forest Soil	MRTIVLAFSLIALAAPSQAAQKTHAKNNDASLEQKCREMVGKEQNDGEGRGGGRLQAQRFGECMMGMPH*
Ga0066905_1004321882	3300005713	Tropical Forest Soil	MRTIVLVFALAAVAAPSHAAQKSHAKNNDAALEQRCREMVGKEQNDGEGRGGGRLQAQRFGECMMGMPH*
Ga0066905_1009514021	3300005713	Tropical Forest Soil	MRTIVLAFSLIALAAPSQAAQKTHAKHNDASLEQRCREMVGKEQYEGEGRGGGRLQSQRFGECMMGMPQ*
Ga0066903_1011416142	3300005764	Tropical Forest Soil	MRSIVVLLALIALTVPSQAAPKARDDGASRETECRDMVGKETTEGEGRSHIGQFQAQRFGECMMGTRQ*
Ga0066903_1015486053	3300005764	Tropical Forest Soil	MRTIVLAFSLIAVAASSQAAQKSHAKNTDASLEQRCRDMVGKEQYEGEGRGGGRLQSQRFGECMMGMPH*
Ga0066903_1019716802	3300005764	Tropical Forest Soil	MRTIVLVLSLIVLATPIQAASKTKARADDNASLEKRCHDQVGKEQYEGEGRGHIGQMQAQRFSDCMMGR*
Ga0066903_1024757462	3300005764	Tropical Forest Soil	MRTIVLAFSLIALAAPSQAAPKTTAKHNDALLEQRCREMVGKEQYEGEGRGGGRLQTQRFGECMMGTAH*
Ga0066903_1025584932	3300005764	Tropical Forest Soil	MRMIVLVFSLIALAAPSHAAPSTKSRVDNAASMEKRCHEMVGKEQYDGEGRSHIGQLQAQRFSDCMMGY*
Ga0066903_1026976482	3300005764	Tropical Forest Soil	MNTLNTARMIVLALSLLALAVPAQAAPRPQAGDHGTSLEQTCREKVGKEEREGEGRGHMGQLQVQRFSDCMMGRPY*
Ga0066903_1050278842	3300005764	Tropical Forest Soil	MKMLNTARTIVLVLSLTALAAPSQAAPRNSRDNRTPLELFNALQQRCHEMVGKEEREGEGRGHIGQLQVHRFSDCMMGRP*
Ga0066903_1063581861	3300005764	Tropical Forest Soil	MRTIVLAFALVAVAAPSQAAQRSHAKNTDASLEQKCREMVGKEQYEGEGRGGGRLQSQRFGECMMGMPH*
Ga0066903_1069973472	3300005764	Tropical Forest Soil	MRTLSTAKTVVLVLSMVALAAPSQAAPRNNGRDNGTSLEQKCHEMVGKEEREGEGRGHMGQLQVQRFSDCMMGRQ*
Ga0066903_1077730062	3300005764	Tropical Forest Soil	RRSSYLGNAMRTSPSAGNPIGRLIMRTIVLALSLVALAAPSQAAQRSHAKNSDASLEQKCREMVGKEQYEGEGRGGGRLQSQRFGECMMGMPH*
Ga0066903_1079080252	3300005764	Tropical Forest Soil	NPTTGVLSTMKKLVLVLALSLVALAAPAQAAQRTHARDNGTSLEQTCREKVGQEIYEGEGRSHMGQLQVQRFSECMMGRPM*
Ga0081455_100033629	3300005937	Tabebuia Heterophylla Rhizosphere	MRTIVLAFSLVALAAPSQAAQKTHAKNNDASLEQKCREMVGKEQNDGEGRGGGRLQAQRFGECMMGMPH*
Ga0081455_103433191	3300005937	Tabebuia Heterophylla Rhizosphere	MRTIVLAFSLIALAAPSQAAQKTHAKNSDASLEQKCREMVGKEQYEGEGRGGGRLQSQRFGECMMDMPH*
Ga0081455_105212902	3300005937	Tabebuia Heterophylla Rhizosphere	MRTIVLVLSLIVLATPIQAASKTKARADDNASQEKRCHDQVGKEASEGEGRGHIGQMQAQRFSDCMMGR*
Ga0081455_105650131	3300005937	Tabebuia Heterophylla Rhizosphere	MSVRMIVLLLSLVALAAPSEAAQRTKARDDGASLEQKCREMVGKEVGEGEGRGGAGRLQAQRWSDCMMGTEH*
Ga0081540_12102691	3300005983	Tabebuia Heterophylla Rhizosphere	MRKNPNLLETKMRTIVLVLSLIVLATPIQAASKTKARADDNASLEKRCHDQVGKEQYEGEGRGHIGQMQAQRFSDCMMGH*
Ga0081540_13464741	3300005983	Tabebuia Heterophylla Rhizosphere	MRTFSTAITIVLALSVIALAAPSQAAPRSNGRDNGTSLERRCQEMVGKEEREGEGRGHIGQFQVQRFSDCMMGRPPM*
Ga0075365_100970854	3300006038	Populus Endosphere	ALAAPAHAAQKTNARNNDASIEQKCREMVGKEQYEGEGRGGVGRLQAQRFGECMVGMPH*
Ga0075365_100989091	3300006038	Populus Endosphere	MNTLMTAGRTVALLSALTLLSAPADAAQRTQKHNDTSLEQTCREQVGKEQYDGEGRGGAGRLQAQRFGECMIGMPH*
Ga0075365_105428021	3300006038	Populus Endosphere	MKTITLAVSLLSLLLLAAPSQAAQKTQAKNGNASLEQKCREEVGKEQYDGEGRGGAGRLQAQRFGDCMSGMQQH*
Ga0075417_105653041	3300006049	Populus Rhizosphere	LWLETPIGRLIMRTIVLAFSLVALAAPSQAAQKTHAKNNDASLEQKCREMVGKEQNDGEGRGGGRLQAQRFGECMMGMPH*
Ga0075428_1005693132	3300006844	Populus Rhizosphere	MRTIVLAFSLIALAAPSQAAQKTHAKHNDASLEQKCRETVGKEQYEGEGRSGGRLQAQRFGECMMGMPQ*
Ga0075420_1005399051	3300006853	Populus Rhizosphere	MRTIVLAFSLVALAAPSQAAQKTHAKNNDASLEQRCREMVGKEQNDGEGRGGGRLQAQRFGECMMGMPH*
Ga0075425_1006370862	3300006854	Populus Rhizosphere	MNTLNTARTMVLALSLLALAVPAQAAPRSNAGDHGTSLEQTCRDKVGKEEREGEGRGHMGQLQVQRFSECMMGRPY*
Ga0099795_104390562	3300007788	Vadose Zone Soil	SLIALAAPSQAAQNTKARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGMPH*
Ga0111539_104748523	3300009094	Populus Rhizosphere	RTIVLAFSLVALAAPSQAAQKTHAKNNDASLEQKCREMVGKEQYEGEGRGGGRLQSQRFGECMMGMPH*
Ga0099792_100950422	3300009143	Vadose Zone Soil	MKTLSTARTIVLVFSLIALAAPSQAAQRTKARDNGTSLEQTCQELVGREEREGEGRSHIGQFQVQRFSDCMMGAPRH*
Ga0099792_103863961	3300009143	Vadose Zone Soil	VLVFSLIALATPSQAAQKTQARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGMPH*
Ga0111538_124267602	3300009156	Populus Rhizosphere	MRTIVLAFSLVALAAPSQAAQKTHAKNNDASLEQKCRETVGKEQYEGEGRSGGRLQAQRFGECMMGMPQ*
Ga0126374_106278302	3300009792	Tropical Forest Soil	MIVLLLSLVALAAPSQAAQRTKARDNGALLEQKCREMVGKEVSEGEGRGGAGRLQAQRFSDCMMGTEH*
Ga0126374_109022242	3300009792	Tropical Forest Soil	MTTAGTARAIVLVLSIIALANPSHAAPRTNGRDNGSSLEQRCHEMVGKEEREGEGRGHIGQFQVQRFSDCMMGRPLM*
Ga0126380_102885302	3300010043	Tropical Forest Soil	MTAMGVMVLEFSLIASVVPSQAAQQTKARGDGASLEQTCRDLVGKEEREGEGRSHMGQFQAQRFSDCMMDTPR*
Ga0126380_108480842	3300010043	Tropical Forest Soil	MRTIVLAFALIAVAAPSQAAQKSHAKNADASLEQKCREMVGKEQYEGEGRGGGRLQSQRFGECMMGMPH*
Ga0126380_116604072	3300010043	Tropical Forest Soil	MRTIVLAFAHVAVAAPSQAAQKTHAKNNDAALEQRCREMVGKEQNDGEGRGGGRLQAQRFGECMMGTPH*
Ga0126380_120840531	3300010043	Tropical Forest Soil	MRTIVLVLSLIVLATPIQAASKTKARADDNASQEKRCHDQVGKEQPESEGRSHIGQLQVQRFSDCMMGR*
Ga0126380_123000012	3300010043	Tropical Forest Soil	MIVLLLSLVALAAPSQAAQRTKARDNGALLEQKCREMVGKEVGEGEGRGGAGRLQAQRFSDCMMGT
Ga0126384_108568532	3300010046	Tropical Forest Soil	MRTIVLAFALIAVAAPSQAAQKSHAKNTDASLEQKCREMVGKEQYEGEGRGGGRLQSQRFGECKMGMPH*
Ga0126382_103717971	3300010047	Tropical Forest Soil	MKAFMTAMGVMVLEFSLIASAVPSQAAQQTKARRDGASLEQTCRDLAGKEEREGEGRSHMGQFHVQRFSDCMMGTPR*
Ga0126382_113689971	3300010047	Tropical Forest Soil	MRTIVLVFSLIALAAPSHAAPRTKSKVDDVASTEKRCHEMVGKEQYDGEGRGGAGRLQAQRFSDCMVGMPH*
Ga0126382_119854561	3300010047	Tropical Forest Soil	MTAMGVMVLEFSLIASVVPSQAAQQTKARGDGASLEQTCRDLVGKEEREGEGRSHMGQFQAQRFSDCMGTPR*
Ga0126382_120181721	3300010047	Tropical Forest Soil	MRTIVLAFALVAVAAPSQAAQKTHAKNNDAALEQRCREMVGKEQNDGEGRGGGRLQAQRFGECMMGMPH*
Ga0134071_102109713	3300010336	Grasslands Soil	MNTLSTARTIALVFSLIALAAPSHAAPRTNGTSLEQTCQKTVGKEEREGEGRSHIGQLQVQRFSNCMMGLPY*
Ga0126376_105168502	3300010359	Tropical Forest Soil	MRTIVLAFSLIAVAAPSQAAQKSHAKNTDASLEQKCRDMVGKEQYEGEGRGGGRLQSQRFGECMMGMPH*
Ga0126376_119363101	3300010359	Tropical Forest Soil	MRTIVLAFSLLALAAPSQAAPRTLGRDGGTSLDQKCQEIVGKEEREGEGRGRVGQLQVQRFSDCMMGRPLM*
Ga0126372_103689073	3300010360	Tropical Forest Soil	MRTIVLVFALAAVAAPSHAAQKSHAKNNDAALEQRCREMVGKEQNDGEGRGGGRLQAQRFGECMMGTPH*
Ga0126372_103730233	3300010360	Tropical Forest Soil	MIVLLLSLVALAAPSQAAQRTKARDNGALLEQKCREMVGKEVGEGEGRGGAGRLQAQRFSDCMMGTEH*
Ga0126378_128882611	3300010361	Tropical Forest Soil	MNTLNTARTIVLALSLLALAVPAQAAPRTQAGDHGTSLEQTCREKVGKEEREGEGRAHMGQLQVQRFSDCMMGQPM*
Ga0126377_101873201	3300010362	Tropical Forest Soil	MGVMVLEFSLIASVVPSQAAQQTKARGDGASLEQTCRDLVGKEEREGEGRSHMGQFQAQRFSDCMMGTPR*
Ga0126377_112587342	3300010362	Tropical Forest Soil	AAPSQAAQKSHAKNTDASLEQKCREMVGKEQYEGEGRGGGRLQSQRFGECMMGMPH*
Ga0126379_102600272	3300010366	Tropical Forest Soil	LAAPSQAAQRTKARDNGALLEQKCREMVGKEVGEGEGRGGAGRLQAQRFSDCMMGTEH*
Ga0124844_10928812	3300010868	Tropical Forest Soil	MIVLLLSFVALAAPSQAAQRTKARDNGALLEQKCREMVGKEVGEGEGRGGAGRLQAQRFSDCMMGTEH*
Ga0138505_1000755771	3300010999	Soil	MKTLTTARTIVLVFSLIALATPSQAAQTTRARDNGASLEQKCHELVGKEEREGEGRGHIAQFQVQRFSDCMMGMPH*
Ga0137381_108668172	3300012207	Vadose Zone Soil	MKTLSTARTIALVFSLIALAAPSQAAQRTNGTSLEQTCQKTVGKEEREGEGRSHIGQLQVQRFSNCMMGLPH*
Ga0137379_103239941	3300012209	Vadose Zone Soil	MKTLSTARTIALVFSLIALAAPSQAAQRTNGTSLEQTCREKVGNEEREGEGRSHIGQLQVQRFSNCMMG
Ga0150985_1110094001	3300012212	Avena Fatua Rhizosphere	HNMKTLTTTARTIVLVFSLIALATPSQAAQKTKARDNGASLEQKCHELVGKEEREGEGRGHIGHFQVQRFSDCIMGVPN*
Ga0150985_1156009311	3300012212	Avena Fatua Rhizosphere	NKMNTLTTARTIVLAFSLIALAAPSEAAQRTKARDNGASLEQKCHELVGKEEREGEGRGHIGQFQVQRFSDCMMGMPN*
Ga0137371_112796891	3300012356	Vadose Zone Soil	MKTLSTARTIALVFSLIALAAPSQAAQRTNGTSLEQTCREKVGNEEREGEGRSHIGQLQVQRFSNCMMGLPH*
Ga0137398_102980621	3300012683	Vadose Zone Soil	MKTLTAARTIVLVFSLIALATPSQAAQKTKARDNGVSLEQKCHELVGKEEREGEGRGHIGHLQVQRFSDCMMGVPY*
Ga0137397_101832052	3300012685	Vadose Zone Soil	MKTLRTARTIVLVFSLIALAAPSQAAQRTKARDNGTSLEQTCQELVGREEREGEGRSHIGQFQVQRFSDCMMGAPRH*
Ga0137397_104962962	3300012685	Vadose Zone Soil	MKTLTTARTIVLVFSLIALATPSQAAQKTKARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGMPH*
Ga0137413_107971931	3300012924	Vadose Zone Soil	MNTLTTARTIVLVFSLIALATPSQAAQKTQARDNGASLEQKCHELVGKEEREGEGRGHIGHFQVQRFSDCMMGMPN*
Ga0137419_109893851	3300012925	Vadose Zone Soil	MKTLTAARTIVLVFSLIALATPSQAAQKTKARDNGASLEQKCHELVGKEEREGEGRGHIGQFQVQRFSDCMMGMPH*
Ga0137416_118287551	3300012927	Vadose Zone Soil	MKTLTAARTIVLVFSLIALATPSQAAQKTKARDNGVSLEQKCHELVGKEEREGEGRGHIGQFKCSVS
Ga0137410_120080591	3300012944	Vadose Zone Soil	VLVFSLIALATPSQAAQKTQARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMM
Ga0126375_104409522	3300012948	Tropical Forest Soil	MRTIVLVFALAAVAAPSQAAQKSHAKNNDAALEQRCREMVGKEQNDGEGRGGGRLQAQRFGECMMGMPH*
Ga0137412_102095583	3300015242	Vadose Zone Soil	MKTLTAARTIVLVFSLIALATPSQAAQKTQARDNGASLEQKCHELVGKEAREGEGRAHIGQF
Ga0137409_106218601	3300015245	Vadose Zone Soil	MKTLSTARTIVLVFSLIALATPSQAAQKTQARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGMPH*
Ga0132258_110783524	3300015371	Arabidopsis Rhizosphere	MRTIVLALSLIALAAPAQAAQKTHAKHNDASLEQKCRDTVGKEQYEGEGRGGGRLQSQRFGECMMGMPQ*
Ga0132256_1000729581	3300015372	Arabidopsis Rhizosphere	MRTIVLAFSLIALAAPSQAAQKTAKHNDALLEQKCREMVGKEQYEGEGRSGGRLQAQRFGECMMGTPH
Ga0132256_1007745912	3300015372	Arabidopsis Rhizosphere	MRTIVLALSLVALAAPSQAAQRSHAKNSDASSEQKCREMVGKEQYEGEGRGGGRLQSQRFGECMMGMPH*
Ga0132257_1002997572	3300015373	Arabidopsis Rhizosphere	MRTIVLAFSLIALAAPSQAAQRSHAKNTDASLEQKCREMVGKEQYEGEGRGGGRLQSQRFGECMMGMPQ*
Ga0132257_1015963422	3300015373	Arabidopsis Rhizosphere	MRTIVLALSLVALAAPSQAAQRSHAKNSDASSEQKCREMVGKEQYEGEGRGGGRLQSQRFGE
Ga0132257_1019628682	3300015373	Arabidopsis Rhizosphere	MRTIVLVFSLIALAAPSHAAPRTKSKVENAASTEKRCHEMVGKEQYDGEGRSHIGQFQVQRFSDCMMGY*
Ga0132257_1020835112	3300015373	Arabidopsis Rhizosphere	MIVLLLSFVALAAPSQAAQRTKARDNGGLLEQKCREMVGKEVGEGEGRGGAGRLQAQRFSDCMMGTE
Ga0132255_1017024602	3300015374	Arabidopsis Rhizosphere	MRTIVLVFSLIALAAPSHAAPRTKSKVENAASTEKRCDEMVGKEQYDGEGRSHIGQFQVQRFSDCMMGY*
Ga0184610_11355321	3300017997	Groundwater Sediment	MKTLTTARTIVLVFSLIALAAPSQAAQNTKARDNGASLEQKCHELVGKEEREGEGRGHIGQFQVQRFSDCMMGMPH
Ga0184604_100789411	3300018000	Groundwater Sediment	MKTLTTARTIVLVFSLIALATSSQAAQNTRARDNGTSLEQKCHELVGKEEREGEGRGHIGQFQVQRFSDCMMGMPN
Ga0184604_102282121	3300018000	Groundwater Sediment	MKTLTTARTIVLVFCLIALATPSQAAQKTKARDNGASLEQKCHEVVGKEEREGEGRGHIGHFQVQRFSDCMMGTPN
Ga0184608_100448642	3300018028	Groundwater Sediment	MKTLTTARTIVLVCSLIALATPSQAAQKTKARDNGASLEQKCHELVGKEEREGEGRGHIGQFQVQRFSDC
Ga0184634_104759461	3300018031	Groundwater Sediment	MKTLTTARTIVLVFSLIALATPSQAAQKTKARDNGASLEQKCHELVGKEEREGEGRGHIGHFQVQRFSDCMMGMPH
Ga0184620_102341432	3300018051	Groundwater Sediment	MKTLTTARTIVLVFSLIALATPSQAAQKTQARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGTPN
Ga0184621_100685702	3300018054	Groundwater Sediment	MKTLTTARTIVLVFCLIALATPSQAAQKTKARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGMPH
Ga0184619_100358051	3300018061	Groundwater Sediment	MKTLTTARTIVLVFSLIALATPSQAAQTTRARDNGASLEQKCHELVGKEEREGEGRGHIGQFQVQRFSDCMMGMPN
Ga0184617_10042401	3300018066	Groundwater Sediment	MKTLTTARTIVLVFSLIALATPSQAAQKTKARDNGASLEQKCHELVGKEEREGEGRGHIGQFQVQRFSDCMMGMPH
Ga0184611_10236532	3300018067	Groundwater Sediment	MKTLTTARTIVLVFSLIALATPSQAAQKTKARDNGASLEQKCHELVGREEREGEGRGHIGQFQVQRFSDCMMGMPN
Ga0184618_101017441	3300018071	Groundwater Sediment	MTTLTTARTIVLVFSLIALAAPSQAAQKTKARDNGASLEQKCHELIGKEEREGEGRGHIGQLQVQRFSDCMMGMPN
Ga0184635_101427491	3300018072	Groundwater Sediment	MKTLTTARTIVLVFSLIALATPSQAAQTTRARDNGASLEQKCHELVGKEEREGEGRGHIAQFQVQRFSDCMMGMPH
Ga0184624_100333642	3300018073	Groundwater Sediment	MKTLTTARTIVLVFSLIALATSSQAAQNTRARDNGTSLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGMPH
Ga0184609_101824812	3300018076	Groundwater Sediment	VFSLIALATPSQAAQKTQARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGMPN
Ga0184633_101699361	3300018077	Groundwater Sediment	MKTLTTARTIVLVFSLIALATPSQAAQKTQARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGMPH
Ga0066662_101064362	3300018468	Grasslands Soil	MNTLSTARTIALVFSLIALAAPSHAAPRTNGTSLEQTCQKTVGKEEREGEGRSHIGQLQVQRFSNCMMGLPY
Ga0184644_14652741	3300019269	Groundwater Sediment	NMKTLTTARTIVLVFSLIALATPSQAAQTTRARDNGASLEQKCHELVGKEEREGEGRGHIGQLQVQRFSDCMMGMPN
Ga0184642_16005181	3300019279	Groundwater Sediment	IVLVFSLIALATPSQAAQKTQARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGMPH
Ga0193756_10484162	3300019866	Soil	MNTLTTARTIVLVFSLIALATPSQAAQKTQARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGMPH
Ga0193704_10255362	3300019867	Soil	MKTLTTARTIVLVFSLIALATPSQAAQKTKARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGMPH
Ga0193703_10134223	3300019876	Soil	KTLTTARTIVLVFSLIALATPSQAAQKTQARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGMPH
Ga0193730_11024701	3300020002	Soil	SLVNILRHNMKTLTTARTIVLVFSLIALATPSQAAQKTQARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGMPH
Ga0193755_11080502	3300020004	Soil	MNTLTTARTIVLVFSLIALATPSQAAQKTHARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGMPH
Ga0193697_10288911	3300020005	Soil	LIALATPSQAAQKTQARDNGASLEQKCHELVGKEEREGEGRGHIGQFQVQRFSDCMMGMP
Ga0210382_101244622	3300021080	Groundwater Sediment	MKTLTTARTIVLVFSLIALAAPSQAAQKTKARDNGASLEQKCHELIGKEEREGEGRGHIGQLQVQRFSDCMMGMPN
Ga0222625_12551431	3300022195	Groundwater Sediment	TTARTIVLVFSLIALATPSQAAQKTQARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGMPH
Ga0224452_11493072	3300022534	Groundwater Sediment	RHNMKTLTTARTIVLVFSLIALATPSQAAQKTQARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGMPH
Ga0209438_10470192	3300026285	Grasslands Soil	MKTLRTARTIVLVFSLIALAAPSQAAQRTKARDNGTSLEQTCQELVGREEREGEGRSHIGQFQVQRFSDCMMGAPRH
Ga0209474_100352705	3300026550	Soil	MKMLNTARTIVLVLSLTALAAPSQAAPRNSRDNGTPLELFNALQQRCHEMVGKEEREGEGRGHIGQLQVQRFSECMMGRPFM
Ga0179593_10577472	3300026555	Vadose Zone Soil	MKTIVLALSLIALAAPSHAAPRSKAKVDDAASMERKCHEMVGKEQTESEGRSHIGQLQVQRFSDCMMGAPH
Ga0208997_10024131	3300027181	Forest Soil	MNTLTTARTIVLVFSLIALAAPSQAAQRTNARDHGPSLEQKCHELVGKEEREGEGRGHIGHLQVQRFSDCMMGMPN
Ga0209106_10368222	3300027616	Forest Soil	MRTLETNMRTIVLVLSLIALATPSHAAQRTKAGSDDAASVEKRCHEMVGKEQSEGEGRSHIGQLQAQRFSDCMMGAPH
Ga0209488_101642102	3300027903	Vadose Zone Soil	MKTLSTARTIVLVFSLIALAAPSQAAQRTKARDNGTSLEQTCQELVGREEREGEGRSHIGQFQVQRFSDCMMGAPRH
Ga0209382_100159693	3300027909	Populus Rhizosphere	MRTIVLAFSLVALAAPSQAAQKTHAKNNDASLEQKCREMVGKEQNDGEGRGGGRLQAQRFGECMMGMPH
Ga0209382_110392792	3300027909	Populus Rhizosphere	MRTIVLAFSLIALAAPSQAAQKTHAKNNDASLEQRCREMVGKEQNDGEGRGGGRLQAQRFGECMMGTPH
Ga0209382_119703691	3300027909	Populus Rhizosphere	MRMIVLAFSLMALAAPAHAAQKTNARNNDASIEQKCREMVGKEQYEGEGRGGVGRLQAQRFGECMVGMPH
Ga0137415_113642311	3300028536	Vadose Zone Soil	ASLTWRRNMKTLTAARTIVLVFSLIALATPSQAAQKTKARDNGVSLEQKCHELVGKEEREGEGRGHIGQFKCSVSPTA
Ga0247822_107299251	3300028592	Soil	MKTLTTARTIVLVFSLIALATPSQAAQKTKARDNGASLEQKCHELVGKEEREGEGRGHLGHFQVQRFSDCMMGTPN
Ga0307321_10999621	3300028704	Soil	MKTLTTARTIVLVFSLIALATPSQAAQKTKARDNGASLEQKCHELVGKEEREGEGRGHIGQFHVQRFSDCMMGMPH
Ga0307295_100719101	3300028708	Soil	MKTLTTARTIVLVFSLIALATPSQAAQTTRARDNGASLEQKCHELVGKEEREGEGRGHIGQFQVQRFSDCMMGMPH
Ga0307285_100230813	3300028712	Soil	MKTLTTARTIVLVFSLIALATPSQAAQKTQARDNGASLEQKCHELVGKEEREGEGRGHIGQFQVQRFSDCMMGMPH
Ga0307317_101608001	3300028720	Soil	MKTLTTARTIVLVFSLIALAAPSQAAQNTKARDNGASLEQKCHELVGKEEREGEGRGHIGHFQVQRFSDCMMGMPN
Ga0307315_100931041	3300028721	Soil	LNTLTTARTIVLVFSLIALAAPSQAAQKTKARDNGASLEQKCHELVGKEEREGEGRGHIGQFQVQRFSDCMMGMPH
Ga0307319_103030731	3300028722	Soil	MKTLTTARTIVLVFSLIALATPSQAAQKTKARDNGASLEQKCHELVGKEEREGEGRGHIGHFQVQRFSDCMMGMPN
Ga0307288_102151021	3300028778	Soil	VLVFSLIALATPSQAAQKTQARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGMPH
Ga0307282_105845992	3300028784	Soil	MRTIVLVFSLIALAAPSHAAPGTKSKVENAASTEKRCHEMVGKEQYDGEGRSHIGQFQVQRFSDCMMG
Ga0307290_102790492	3300028791	Soil	MKTLTTARTIVLVFSLIALAAPSQAAQNTKARDNGASLEQKCHELVGKEEREGEGRGHIGHFQVQRFSDCMMGMPH
Ga0307299_102582641	3300028793	Soil	MKTLTTARTIVLVFSLIALAAPSQAAQKTKARDNGASLEQKCHELVGKEEREGEGRGHIGQFQVQRFSDCMMGMPN
Ga0307292_101122201	3300028811	Soil	MKTLTTARTIVLVCSLIALATPSQAAQKTQARDNGASLEQKCHELVGKEEREGEGRGHIGQFQVQRFSDCMMGMPN
Ga0307292_103112102	3300028811	Soil	MKTLTTARTIVLVFSLIALAAPSQAAQNTKARDNGASLEQKCHELVGKEEREGEGRGHIGHFQVQ
Ga0307292_104096812	3300028811	Soil	MRTIVLVFSLIALAAPSHAAPGTKSKVENAASTEKRCHEMVGKEQYDGEGRSHIGQFQVQRFSDCM
Ga0307296_106006262	3300028819	Soil	MKTLTTARTIVLVFSLIALATPSQAAQTTRARDNGASLEQKCHELVGKEEREGEGRGHIGQFQVQRFSDCMM
Ga0307310_102381271	3300028824	Soil	MKTLTTARTIVLVCSLIALATPSQAAQKTQARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGMPH
Ga0307312_103241573	3300028828	Soil	CRHNMKTLTTARTIVLVFSLIALATPSQAAQTTRARDNGASLEQKCHELVGKEEREGEGRGHIAQFQVQRFSDCMMGMPH
Ga0307289_102544672	3300028875	Soil	LVNIWIHNMKTLTTARTIVLVFSLIALATPSQAAQKTQARDNGASLEQKCHELVGKEEREGEGRAHIGQFQVQRFSDCMMGMPH
Ga0308200_11484461	3300030905	Soil	MKTLTTARTIVLVFSLIALATPSQAAQNTRARDNGTSLEQKCHELVGKEEREGEGRGHIGQFQVQRFSDCMMGMPN
Ga0307501_102626932	3300031152	Soil	MNTLTTARTIVLAFSLIALAAPSEAAQRTKARDNGASLEQKCHELVGKEEREGEGRGHIGQFQVQRFSDCMMGMPN
Ga0307497_101822891	3300031226	Soil	MKTLTTTARAIVLVFSLIALATPSQAAQKTKARDNGASLEQKCHELVGKEEREGEGRGHIGHFQVQRFSDCIMGVPN
Ga0307497_104362162	3300031226	Soil	MRTIVLVFSLIALAAPSHAAPGTKSKVENAASTEKRCHEMVGKEQYDGEGRSHIGQFQVQRFSDCMTGY
Ga0307468_1000466962	3300031740	Hardwood Forest Soil	MKTLTTARTIVLVFSLIALATPSQAAQKTKARDNGASLEQKCHELVGKEEREGEGRGHIGHFQVQRFSDCMMGTPN
Ga0307470_104168912	3300032174	Hardwood Forest Soil	MKTLTTTARTIVLVFSLIALATPSQAAQNTKARDNGASLEQKCHELVGKEEREGEGRGHIGHFQVQRFSDCMMGTPN
Ga0307472_1002275212	3300032205	Hardwood Forest Soil	MRTIVLAFSLIALAAPSQAAQKTHAKHNDASLEQRCREMVGKEHYEGEGRGGGRLQSQRFGECMMGMPQ
Ga0307472_1010352751	3300032205	Hardwood Forest Soil	MKTLTTARTIVLVFSLIALATPSQAAQNTKARDNGASLEQKCHELVGKEEREGEGRGHIGHFQVQRFSDCMMGTPN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F037615

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences